Citrus Sinensis ID: 027071

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
Protein Sequence
MEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKNF
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHccccccccccccccccccccccEEEEEEEEEEEEEEEEEEEccccccccccccccEEEEEEEEEccccccHHHHHHHccccccccccccccccEEEEcccccccEEEEEEEEEEEEEEEEccccccEEEEEEEEEEEEccccccccccEEEEEEEcccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccHHccccccccHcEEccccccccHHHHcccccccccccEEEEEEEEEEccccEEEccccccccccccccccEEEEEEEcccccccHHHHHHHHHHccccccccccccccEEEEcccccccEEEEEEEEEEEEEEEEEEccccEEEEEEEEEEEEEcccccccccEEEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
meelvapipleeshklaldgkhkttaenvkrpapkaggcriegyvrvkkvpgnliisarsgahsfdtsemnMSHVISHlsfgrklspkvmSDVQRLipylggshdrlngrsfinhrevganVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVqsiyipaakfhfelspmqvvitedpksFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKNF
Flexible Loop (DISEMBL)
meelvapipleeshklaldgkhkttaenvkrpapkaggcriegYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLggshdrlngrSFINHREVGANVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKNF
Low Complexity Region (SEG)
MEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKNF
Disordered region (IsUnstruct)
************************************GGCRIEGYVRVKKVPGNLIISARSG***********SHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKK*******
Disordered Region (DISOPRED)
***LVAPIPLEESH***********************GCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYSREHSLLEEYE**********IYIPAAKFHFELSPMQVVITEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGK**
Disordered Region (DISEMBL)
MEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKNF
Disordered Region (DISPRO)
****VAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIG*N*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKNF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	228	2.2.26 [Sep-21-2011]
Q9LJU2	483	Protein disulfide-isomera	yes	no	0.986	0.465	0.726	2e-96
Q9T042	480	Protein disulfide-isomera	no	no	0.964	0.458	0.688	1e-87
Q69SA9	485	Protein disulfide isomera	yes	no	0.991	0.465	0.666	4e-86
Q4V8Y6	290	Endoplasmic reticulum-Gol	yes	no	0.828	0.651	0.356	2e-23
Q969X5	290	Endoplasmic reticulum-Gol	yes	no	0.828	0.651	0.347	7e-23
Q9DC16	290	Endoplasmic reticulum-Gol	yes	no	0.828	0.651	0.347	1e-22
Q6NS19	290	Endoplasmic reticulum-Gol	N/A	no	0.824	0.648	0.331	1e-20
Q6NVS2	384	Endoplasmic reticulum-Gol	no	no	0.776	0.460	0.325	2e-20
Q803I2	383	Endoplasmic reticulum-Gol	no	no	0.807	0.480	0.313	4e-20
Q66KH2	389	Endoplasmic reticulum-Gol	N/A	no	0.776	0.455	0.308	9e-20

>sp|Q9LJU2|PDI53_ARATH Protein disulfide-isomerase 5-3 OS=Arabidopsis thaliana GN=PDIL5-3 PE=2 SV=1

 Score =  352 bits (902), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 165/227 (72%), Positives = 201/227 (88%), Gaps = 2/227 (0%)

Query: 1   MEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARS 60
           +E LVAPI   E+HK+ALDGK   T +++K+  P  GGCR+EGYVRVKKVPGNL+ISA S
Sbjct: 258 VEGLVAPIH-PETHKVALDGKSNDTVKHLKK-GPVTGGCRVEGYVRVKKVPGNLVISAHS 315

Query: 61  GAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGA 120
           GAHSFD+S+MNMSHV+SH SFGR +SP++++D++RL+PYLG SHDRL+G++FIN  E GA
Sbjct: 316 GAHSFDSSQMNMSHVVSHFSFGRMISPRLLTDMKRLLPYLGLSHDRLDGKAFINQHEFGA 375

Query: 121 NVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVI 180
           NVTIEHYLQ VKTEVITRR  +EHSL+EEYEYTAHSS+ Q+ Y+P AKFHFELSPMQ++I
Sbjct: 376 NVTIEHYLQTVKTEVITRRSGQEHSLIEEYEYTAHSSVAQTYYLPVAKFHFELSPMQILI 435

Query: 181 TEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKN 227
           TE+PKSFSHFITN+CAIIGGVFTVAGILD+I HNT+RL+KKVE+GKN
Sbjct: 436 TENPKSFSHFITNLCAIIGGVFTVAGILDSIFHNTVRLVKKVELGKN 482

Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9T042|PDI54_ARATH Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana GN=PDIL5-4 PE=2 SV=1

 Score =  322 bits (825), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 155/225 (68%), Positives = 189/225 (84%), Gaps = 5/225 (2%)

Query: 4   LVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAH 63
           LV PI LE  H LAL+ K   ++  +K+ AP  GGCR+EGY+RVKKVPGNL++SARSG+H
Sbjct: 261 LVEPIHLEP-HNLALEDKSDNSSRTLKK-APSTGGCRVEGYMRVKKVPGNLMVSARSGSH 318

Query: 64  SFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVT 123
           SFD+S+MNMSHV++HLSFGR++ P+  S+ +RL PYLG SHDRL+GRSFIN R++G NVT
Sbjct: 319 SFDSSQMNMSHVVNHLSFGRRIMPQKFSEFKRLSPYLGLSHDRLDGRSFINQRDLGPNVT 378

Query: 124 IEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITED 183
           IEHYLQIVKTEV+    S   +L+E YEYTAHSS+  S Y+P AKFHFELSPMQV+ITE+
Sbjct: 379 IEHYLQIVKTEVVK---SNGQALVEAYEYTAHSSVAHSYYLPVAKFHFELSPMQVLITEN 435

Query: 184 PKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKNF 228
            KSFSHFITNVCAIIGGVFTVAGILD+ILH++M LMKK+E+GKNF
Sbjct: 436 SKSFSHFITNVCAIIGGVFTVAGILDSILHHSMTLMKKIELGKNF 480

Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds.

Arabidopsis thaliana (taxid: 3702)

>sp|Q69SA9|PDI54_ORYSJ Protein disulfide isomerase-like 5-4 OS=Oryza sativa subsp. japonica GN=PDIL5-4 PE=2 SV=1

 Score =  317 bits (812), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 152/228 (66%), Positives = 189/228 (82%), Gaps = 2/228 (0%)

Query: 1   MEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARS 60
           ME  VA IP +++H LAL+ K   T +  KRPAP   GCRIEG+VRVKKVPG+++ISARS
Sbjct: 258 METYVANIP-KDAHVLALEDKSNKTVDPAKRPAPLTSGCRIEGFVRVKKVPGSVVISARS 316

Query: 61  GAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFI-NHREVG 119
           G+HSFD S++N+SH ++  SFG++LS K+ ++++RL PY+GG HDRL G+S+I  H +V 
Sbjct: 317 GSHSFDPSQINVSHYVTQFSFGKRLSAKMFNELKRLTPYVGGHHDRLAGQSYIVKHGDVN 376

Query: 120 ANVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVV 179
           ANVTIEHYLQIVKTE++T R S+E  L+EEYEYTAHSSLV S Y+P  KFHFE SPMQV+
Sbjct: 377 ANVTIEHYLQIVKTELVTLRSSKELKLVEEYEYTAHSSLVHSFYVPVVKFHFEPSPMQVL 436

Query: 180 ITEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKN 227
           +TE PKSFSHFITNVCAIIGGVFTVAGILD+I HNT+RL+KKVE+GKN
Sbjct: 437 VTELPKSFSHFITNVCAIIGGVFTVAGILDSIFHNTLRLVKKVELGKN 484

Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds. May play a role in storage protein biogenesis.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q4V8Y6|ERGI1_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Danio rerio GN=ergic1 PE=2 SV=1

 Score =  108 bits (271), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 114/213 (53%), Gaps = 24/213 (11%)

Query: 20  GKHKT--TAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVIS 77
           G+H+      ++K P     GCR EG   + KVPGN  +S  S   +      +M+H+I 
Sbjct: 94  GRHEVGHIENSMKVPLNNGHGCRFEGEFSINKVPGNFHVSTHSA--TAQPQSPDMTHIIH 151

Query: 78  HLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKT--EV 135
            L+FG KL    +  VQ     LGG+ DRL   +  +H         ++ L+IV T  E 
Sbjct: 152 KLAFGAKLQ---VQHVQGAFNALGGA-DRLQSNALASH---------DYILKIVPTVYEE 198

Query: 136 I--TRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITN 193
           +   +R+S ++++  + EY A+S   +   IPA  F ++LSP+ V  TE  + F  FIT 
Sbjct: 199 LGGKQRFSYQYTVANK-EYVAYSHTGR--IIPAIWFRYDLSPITVKYTERRRPFYRFITT 255

Query: 194 VCAIIGGVFTVAGILDAILHNTMRLMKKVEIGK 226
           +CAIIGG FTVAGI+D+ +       KK++IGK
Sbjct: 256 ICAIIGGTFTVAGIIDSCIFTASEAWKKIQIGK 288

Possible role in transport between endoplasmic reticulum and Golgi.

Danio rerio (taxid: 7955)

>sp|Q969X5|ERGI1_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Homo sapiens GN=ERGIC1 PE=1 SV=1

 Score =  107 bits (267), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 109/213 (51%), Gaps = 24/213 (11%)

Query: 20  GKHKT--TAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVIS 77
           G+H+      ++K P     GCR EG   + KVPGN  +S  S          +M+HVI 
Sbjct: 94  GRHEVGHIDNSMKIPLNNGAGCRFEGQFSINKVPGNFHVSTHSATAQ--PQNPDMTHVIH 151

Query: 78  HLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKT---- 133
            LSFG  L    + ++      LGG+ DRL      +H         ++ L+IV T    
Sbjct: 152 KLSFGDTLQ---VQNIHGAFNALGGA-DRLTSNPLASH---------DYILKIVPTVYED 198

Query: 134 EVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITN 193
           +   +RYS ++++  + EY A+S   +   IPA  F ++LSP+ V  TE  +    FIT 
Sbjct: 199 KSGKQRYSYQYTVANK-EYVAYSHTGR--IIPAIWFRYDLSPITVKYTERRQPLYRFITT 255

Query: 194 VCAIIGGVFTVAGILDAILHNTMRLMKKVEIGK 226
           +CAIIGG FTVAGILD+ +       KK+++GK
Sbjct: 256 ICAIIGGTFTVAGILDSCIFTASEAWKKIQLGK 288

Possible role in transport between endoplasmic reticulum and Golgi.

Homo sapiens (taxid: 9606)

>sp|Q9DC16|ERGI1_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Mus musculus GN=Ergic1 PE=1 SV=1

 Score =  106 bits (264), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 108/213 (50%), Gaps = 24/213 (11%)

Query: 20  GKHKT--TAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVIS 77
           G+H+      ++K P     GCR EG   + KVPGN  +S  S          +M+H I 
Sbjct: 94  GRHEVGHIDNSMKIPLNNGAGCRFEGQFSINKVPGNFHVSTHSATAQ--PQNPDMTHTIH 151

Query: 78  HLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKT---- 133
            LSFG  L    + +V      LGG+ DRL      +H         ++ L+IV T    
Sbjct: 152 KLSFGDTLQ---VQNVHGAFNALGGA-DRLTSNPLASH---------DYILKIVPTVYED 198

Query: 134 EVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITN 193
           +   +RYS ++++  + EY A+S   +   IPA  F ++LSP+ V  TE  +    FIT 
Sbjct: 199 KSGKQRYSYQYTVANK-EYVAYSHTGR--IIPAIWFRYDLSPITVKYTERRQPLYRFITT 255

Query: 194 VCAIIGGVFTVAGILDAILHNTMRLMKKVEIGK 226
           +CAIIGG FTVAGILD+ +       KK+++GK
Sbjct: 256 ICAIIGGTFTVAGILDSCIFTASEAWKKIQLGK 288

Possible role in transport between endoplasmic reticulum and Golgi.

Mus musculus (taxid: 10090)

>sp|Q6NS19|ERGI1_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Xenopus laevis GN=ergic1 PE=2 SV=1

 Score =  100 bits (248), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 112/214 (52%), Gaps = 26/214 (12%)

Query: 20  GKHKT--TAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVIS 77
           G+H+      ++K P   A GCR EG   + KVPGN  +S  S       +  +M H+I 
Sbjct: 94  GRHEVGHIDNSMKIPINNAYGCRFEGLFSINKVPGNFHVSTHSAIAQ--PANPDMRHIIH 151

Query: 78  HLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKT--EV 135
            LSFG  L    + ++      LGG+ D+L  ++  +H         ++ L+IV T  E 
Sbjct: 152 KLSFGNTLQ---VDNIHGAFNALGGA-DKLASKALESH---------DYVLKIVPTVYED 198

Query: 136 IT--RRYSREHSLLEE-YEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFIT 192
           +   +++S ++++  + Y   +H+  V    +PA  F ++LSP+ V  TE  +    FIT
Sbjct: 199 LNGKQQFSYQYTVANKAYVAYSHTGRV----VPAIWFRYDLSPITVKYTERRQPMYRFIT 254

Query: 193 NVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGK 226
            VCAIIGG FTVAGILD+ +       KK+++GK
Sbjct: 255 TVCAIIGGTFTVAGILDSFIFTASEAWKKIQLGK 288

Possible role in transport between endoplasmic reticulum and Golgi.

Xenopus laevis (taxid: 8355)

>sp|Q6NVS2|ERGI3_XENTR Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Xenopus tropicalis GN=ergic3 PE=2 SV=1

 Score = 99.4 bits (246), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 35/212 (16%)

Query: 30  KRPAPKAGGCRIEGYVRVKKVPGNLIIS-----ARSGAH-----SFDTSEMNMSHVISHL 79
           K    K  GC++ G++ V KV GN   +      +S  H     SF    +NM+H I HL
Sbjct: 191 KMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHEIRHL 250

Query: 80  SFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRR 139
           SFGR        D   L+  L GS          +   + +++  +++++IV T  +  +
Sbjct: 251 SFGR--------DYPGLVNPLDGS----------SVAAMQSSMMFQYFVKIVPTVYV--K 290

Query: 140 YSREHSLLEEYEYTAHSSLVQSIY----IPAAKFHFELSPMQVVITEDPKSFSHFITNVC 195
              E     ++  T H  +   +     +P     +ELSPM V +TE  +SF+HF+T VC
Sbjct: 291 VDGEVLRTNQFSVTRHEKMTNGLIGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVC 350

Query: 196 AIIGGVFTVAGILDAILHNTMR-LMKKVEIGK 226
           AIIGGVFTVAG++D++++ + R + KK+E+GK
Sbjct: 351 AIIGGVFTVAGLIDSLVYYSTRAIQKKIELGK 382

Possible role in transport between endoplasmic reticulum and Golgi.

Xenopus tropicalis (taxid: 8364)

>sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1

 Score = 98.2 bits (243), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 110/230 (47%), Gaps = 46/230 (20%)

Query: 21  KHKTTAENVKRPA-------PKAGGCRIEGYVRVKKVPGNLIIS-----ARSGAH----- 63
           K   T E  KR          K  GC++ G++ V KV GN   +      +S  H     
Sbjct: 174 KTPDTIEQCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQ 233

Query: 64  SFDTSEMNMSHVISHLSFGRKLSPKV--MSDVQRLIPYLGGSHDRLNGRSFINHREVGAN 121
           SF    +NM+H I HLSFG+     V  + D     P                     A+
Sbjct: 234 SFGLDNINMTHFIKHLSFGKDYPGIVNPLDDTNVAAPQ--------------------AS 273

Query: 122 VTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIY----IPAAKFHFELSPMQ 177
           +  +++++IV T  I  +   E     ++  T H  +   +     +P     +ELSPM 
Sbjct: 274 MMYQYFVKIVPT--IYVKGDGEVVKTNQFSVTRHEKIANGLIGDQGLPGVFVLYELSPMM 331

Query: 178 VVITEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMR-LMKKVEIGK 226
           V  TE  +SF+HF+T VCAIIGGVFTVAG++D++++++ R + KK+E+GK
Sbjct: 332 VKFTEKQRSFTHFLTGVCAIIGGVFTVAGLIDSLIYHSARAIQKKIELGK 381

Possible role in transport between endoplasmic reticulum and Golgi.

Danio rerio (taxid: 7955)

>sp|Q66KH2|ERGI3_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Xenopus laevis GN=ergic3 PE=2 SV=1

 Score = 97.1 bits (240), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 40/217 (18%)

Query: 30  KRPAPKAGGCRIEGYVRVKKVPGNLIIS-----ARSGAH----------SFDTSEMNMSH 74
           K    K  GC++ G++ V KV GN   +      +S  H          SF    +NM+H
Sbjct: 191 KMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHAVEIHDLQSFGLDNINMTH 250

Query: 75  VISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTE 134
            I HLSFG+                  G  + L+G S +  +   +++  +++++IV T 
Sbjct: 251 EIKHLSFGKDYP---------------GLVNPLDGTSIVAMQ---SSMMFQYFVKIVPTV 292

Query: 135 VITRRYSREHSLLEEYEYTAHSSLVQSIY----IPAAKFHFELSPMQVVITEDPKSFSHF 190
            +  +   E     ++  T H  +   +     +P     +ELSPM V  TE  +SF+HF
Sbjct: 293 YV--KVDGEVLRTNQFSVTRHEKMTNGLIGDQGLPGVFVLYELSPMMVKFTEKHRSFTHF 350

Query: 191 ITNVCAIIGGVFTVAGILDAILHNTMR-LMKKVEIGK 226
           +T VCAIIGGVFTVAG++D++++ + R + KK+E+GK
Sbjct: 351 LTGVCAIIGGVFTVAGLIDSLIYYSTRAIQKKIELGK 387

Possible role in transport between endoplasmic reticulum and Golgi.

Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	228
255563725	478	thioredoxin domain-containing protein, p	0.969	0.462	0.802	1e-103
224126339	484	predicted protein [Populus trichocarpa]	0.995	0.469	0.785	1e-103
225461068	482	PREDICTED: protein disulfide isomerase-l	0.982	0.464	0.768	1e-101
224117462	484	predicted protein [Populus trichocarpa]	0.995	0.469	0.763	2e-99
449489976	224	PREDICTED: protein disulfide-isomerase 5	0.982	1.0	0.767	2e-98
449468488	481	PREDICTED: protein disulfide-isomerase 5	0.982	0.465	0.767	2e-98
356543934	480	PREDICTED: protein disulfide-isomerase 5	0.978	0.464	0.767	5e-97
356549839	480	PREDICTED: protein disulfide-isomerase 5	0.978	0.464	0.754	9e-97
297830752	483	hypothetical protein ARALYDRAFT_479582 [	0.986	0.465	0.740	4e-96
18402672	483	protein PDI-like 5-3 [Arabidopsis thalia	0.986	0.465	0.726	1e-94

>gi|255563725|ref|XP_002522864.1| thioredoxin domain-containing protein, putative [Ricinus communis] gi|223537948|gb|EEF39562.1| thioredoxin domain-containing protein, putative [Ricinus communis]

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 183/228 (80%), Positives = 204/228 (89%), Gaps = 7/228 (3%)

Query: 1   MEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARS 60
           ME LVAPI LE         K +   ++ KRPAP  GGCRIEGYVRVKKVPGNLIISARS
Sbjct: 258 MESLVAPIQLESL-------KSENATQSTKRPAPLTGGCRIEGYVRVKKVPGNLIISARS 310

Query: 61  GAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGA 120
           GAHSFD S+MNMSHVISHLSFG K+SPKVM++ +RL+PY+GGSHD+LNGRSF+NHR+V A
Sbjct: 311 GAHSFDPSQMNMSHVISHLSFGLKVSPKVMNEAKRLVPYIGGSHDKLNGRSFVNHRDVDA 370

Query: 121 NVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVI 180
           NVTIEHYLQIVKTEV+TRR SREH LLEEYEYTAHSSLVQS+YIPAAKFHFELSPMQV+I
Sbjct: 371 NVTIEHYLQIVKTEVVTRRSSREHKLLEEYEYTAHSSLVQSVYIPAAKFHFELSPMQVLI 430

Query: 181 TEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKNF 228
           TE+PKSFSHFITNVCAIIGGVFTVAGILD+ILH+T+RLMKKVE+GKNF
Sbjct: 431 TENPKSFSHFITNVCAIIGGVFTVAGILDSILHHTVRLMKKVELGKNF 478

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224126339|ref|XP_002319814.1| predicted protein [Populus trichocarpa] gi|222858190|gb|EEE95737.1| predicted protein [Populus trichocarpa]

 Score =  378 bits (971), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 179/228 (78%), Positives = 207/228 (90%), Gaps = 1/228 (0%)

Query: 1   MEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARS 60
           ME LVAPI +E S + AL+ K +   E+VKRPAP AGGCRIEGYVRVKKVPGNL+ISARS
Sbjct: 258 MEGLVAPIAME-SQRHALEHKPENATEHVKRPAPSAGGCRIEGYVRVKKVPGNLVISARS 316

Query: 61  GAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGA 120
           GAHSFD+++MN+SHVISH SFG K+ P+VMSDV+RLIP++G SHD+LNGRSFINHR+VGA
Sbjct: 317 GAHSFDSAQMNLSHVISHFSFGMKVLPRVMSDVKRLIPHIGRSHDKLNGRSFINHRDVGA 376

Query: 121 NVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVI 180
           NVTIEHYLQ+VKTEV+TRR S EH L+EEYEYTAHSSL Q++Y+P AKFHFELSPMQV+I
Sbjct: 377 NVTIEHYLQVVKTEVVTRRSSAEHKLIEEYEYTAHSSLAQTVYMPTAKFHFELSPMQVLI 436

Query: 181 TEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKNF 228
           TE+PKSFSHFITNVCAIIGGVFTVAGILD+ILHNT R+MKKVE+GKNF
Sbjct: 437 TENPKSFSHFITNVCAIIGGVFTVAGILDSILHNTFRMMKKVELGKNF 484

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461068|ref|XP_002281649.1| PREDICTED: protein disulfide isomerase-like 5-4 [Vitis vinifera] gi|297735969|emb|CBI23943.3| unnamed protein product [Vitis vinifera]

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 176/229 (76%), Positives = 210/229 (91%), Gaps = 5/229 (2%)

Query: 1   MEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARS 60
           ME LVAPIPLE S +LAL+ K  +TA+++KRPAP+ GGCRIEG+VRVKKVPGNL+ISARS
Sbjct: 258 METLVAPIPLE-SQRLALENKSDSTADHIKRPAPRTGGCRIEGFVRVKKVPGNLVISARS 316

Query: 61  GAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINH-REVG 119
           G+HSFD S+MNMSHVISHLSFGRK++P+VMSD++R++PY+GGSHDRLNGRS+I+H  +  
Sbjct: 317 GSHSFDPSQMNMSHVISHLSFGRKIAPRVMSDMKRVLPYIGGSHDRLNGRSYISHPSDSN 376

Query: 120 ANVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVV 179
           ANVTIEHYLQ+VKTEVIT   +R+H L+EEYEYTAHSSLVQS+YIP AKFHFELSPMQV+
Sbjct: 377 ANVTIEHYLQVVKTEVIT---TRDHKLVEEYEYTAHSSLVQSLYIPVAKFHFELSPMQVL 433

Query: 180 ITEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKNF 228
           +TE+ KSF HFITNVCAIIGGVFTVAGILD++LHNTMRLMKK+E+GKNF
Sbjct: 434 VTENRKSFWHFITNVCAIIGGVFTVAGILDSVLHNTMRLMKKIELGKNF 482

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117462|ref|XP_002317580.1| predicted protein [Populus trichocarpa] gi|222860645|gb|EEE98192.1| predicted protein [Populus trichocarpa]

 Score =  367 bits (943), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 174/228 (76%), Positives = 204/228 (89%), Gaps = 1/228 (0%)

Query: 1   MEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARS 60
           ME LVAPI +E S + AL+ K +   ++VKRPAP AGGCRIEGYVRVKKVPGNL+ISA S
Sbjct: 258 MEALVAPIAME-SQRQALEHKPENATQHVKRPAPSAGGCRIEGYVRVKKVPGNLMISALS 316

Query: 61  GAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGA 120
           GAHSFD+ +MN+SHVISH SFG K+ P+VMSDV+RL+PY+G SHD+LNGRSFINHR+VGA
Sbjct: 317 GAHSFDSKQMNLSHVISHFSFGMKVLPRVMSDVKRLLPYIGRSHDKLNGRSFINHRDVGA 376

Query: 121 NVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVI 180
           NVTIEHYLQ+VKTEV+TRR S E  L+EEYEYTAHSSL Q++Y+P AKFHFELSPMQV+I
Sbjct: 377 NVTIEHYLQVVKTEVVTRRSSSERKLIEEYEYTAHSSLSQTVYMPTAKFHFELSPMQVLI 436

Query: 181 TEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKNF 228
           TE+ KSFSHFITNVCAIIGGVFTVAGILD+ILH+T+R+MKKVE+GKNF
Sbjct: 437 TENSKSFSHFITNVCAIIGGVFTVAGILDSILHHTVRMMKKVELGKNF 484

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449489976|ref|XP_004158474.1| PREDICTED: protein disulfide-isomerase 5-3-like [Cucumis sativus]

 Score =  364 bits (934), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 175/228 (76%), Positives = 199/228 (87%), Gaps = 4/228 (1%)

Query: 1   MEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARS 60
           ME+L+AP+P   S KLAL+ K      NVKRPAP AGGCRIEGYVRVKKVPG+L+I+ARS
Sbjct: 1   MEDLIAPLP-AGSQKLALEDKSNNETGNVKRPAPSAGGCRIEGYVRVKKVPGSLVIAARS 59

Query: 61  GAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGA 120
            +HSFD S+MNMSH+ISHLSFGRK+SPK  SD ++LIPY+G SHDRLNGRSFIN R++GA
Sbjct: 60  ESHSFDASQMNMSHIISHLSFGRKISPKAFSDAKQLIPYIGISHDRLNGRSFINQRDLGA 119

Query: 121 NVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVI 180
           NVTIEHYLQIVKTEV+TRR  +   LLEEYEYTAHSS+ QS+YIP  KFHF LSPMQVVI
Sbjct: 120 NVTIEHYLQIVKTEVLTRRSGK---LLEEYEYTAHSSVSQSLYIPVVKFHFVLSPMQVVI 176

Query: 181 TEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKNF 228
           TE+ KSFSHFITNVCAIIGGVFTVAGILDA+LHNT+RLMKKVE+GKNF
Sbjct: 177 TENQKSFSHFITNVCAIIGGVFTVAGILDALLHNTIRLMKKVELGKNF 224

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449468488|ref|XP_004151953.1| PREDICTED: protein disulfide-isomerase 5-4-like [Cucumis sativus]

 Score =  364 bits (934), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 175/228 (76%), Positives = 199/228 (87%), Gaps = 4/228 (1%)

Query: 1   MEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARS 60
           ME+L+AP+P   S KLAL+ K      NVKRPAP AGGCRIEGYVRVKKVPG+L+I+ARS
Sbjct: 258 MEDLIAPLP-AGSQKLALEDKSNNETGNVKRPAPSAGGCRIEGYVRVKKVPGSLVIAARS 316

Query: 61  GAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGA 120
            +HSFD S+MNMSH+ISHLSFGRK+SPK  SD ++LIPY+G SHDRLNGRSFIN R++GA
Sbjct: 317 ESHSFDASQMNMSHIISHLSFGRKISPKAFSDAKQLIPYIGISHDRLNGRSFINQRDLGA 376

Query: 121 NVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVI 180
           NVTIEHYLQIVKTEV+TRR  +   LLEEYEYTAHSS+ QS+YIP  KFHF LSPMQVVI
Sbjct: 377 NVTIEHYLQIVKTEVLTRRSGK---LLEEYEYTAHSSVSQSLYIPVVKFHFVLSPMQVVI 433

Query: 181 TEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKNF 228
           TE+ KSFSHFITNVCAIIGGVFTVAGILDA+LHNT+RLMKKVE+GKNF
Sbjct: 434 TENQKSFSHFITNVCAIIGGVFTVAGILDALLHNTIRLMKKVELGKNF 481

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356543934|ref|XP_003540413.1| PREDICTED: protein disulfide-isomerase 5-4-like [Glycine max]

 Score =  359 bits (922), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 175/228 (76%), Positives = 198/228 (86%), Gaps = 5/228 (2%)

Query: 1   MEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARS 60
           ME LVA +P  ES KL L+ K    A N KRPAP  GGCRI+GYVRVKKVPGNLIISARS
Sbjct: 258 MENLVASLP-SESQKLPLEDK-SNVATNTKRPAPSTGGCRIDGYVRVKKVPGNLIISARS 315

Query: 61  GAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGA 120
            AHSFD S+MNMSHVI+HLSFGRK+S +VMSDV+RLIPY+G SHDRLNGRSFIN  ++GA
Sbjct: 316 NAHSFDASQMNMSHVINHLSFGRKVSLRVMSDVKRLIPYVGSSHDRLNGRSFINTHDLGA 375

Query: 121 NVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVI 180
           NVTIEHYLQIVKTEVITR   +E+ L+EEYEYTAHSS+ QS++IP AKFH ELSPMQV+I
Sbjct: 376 NVTIEHYLQIVKTEVITR---KEYKLVEEYEYTAHSSVAQSLHIPVAKFHLELSPMQVLI 432

Query: 181 TEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKNF 228
           TE+ KSFSHFITNVCAIIGG+FTVAGI+DAI HNT+RLMKKVE+GKNF
Sbjct: 433 TENQKSFSHFITNVCAIIGGIFTVAGIMDAIFHNTIRLMKKVELGKNF 480

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549839|ref|XP_003543298.1| PREDICTED: protein disulfide-isomerase 5-4-like [Glycine max]

 Score =  358 bits (919), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 172/228 (75%), Positives = 200/228 (87%), Gaps = 5/228 (2%)

Query: 1   MEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARS 60
           ME LVA +P  ES KL L+ K    A+N +RPAP  GGCRI+GYVRVKKVPGNLI SARS
Sbjct: 258 MENLVASLP-SESQKLPLEDK-SDVAKNTERPAPSTGGCRIDGYVRVKKVPGNLIFSARS 315

Query: 61  GAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGA 120
            AHSFD S+MNMSHVI+HLSFGRK+SP+VMSDV+RLIPY+G SHDRLNGRSFIN  ++GA
Sbjct: 316 NAHSFDASQMNMSHVINHLSFGRKVSPRVMSDVKRLIPYVGSSHDRLNGRSFINTHDLGA 375

Query: 121 NVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVI 180
           NVT+EHYLQIVKTEVITR   +++ L+EEYEYTAHSS+ QS++IP AKFH ELSPMQV+I
Sbjct: 376 NVTMEHYLQIVKTEVITR---KDYKLVEEYEYTAHSSVAQSLHIPVAKFHLELSPMQVLI 432

Query: 181 TEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKNF 228
           TE+ KSFSHFITNVCAI+GG+FTVAGI+DAILHNT+RLMKKVE+GKNF
Sbjct: 433 TENQKSFSHFITNVCAIVGGIFTVAGIMDAILHNTIRLMKKVELGKNF 480

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297830752|ref|XP_002883258.1| hypothetical protein ARALYDRAFT_479582 [Arabidopsis lyrata subsp. lyrata] gi|297329098|gb|EFH59517.1| hypothetical protein ARALYDRAFT_479582 [Arabidopsis lyrata subsp. lyrata]

 Score =  356 bits (914), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 168/227 (74%), Positives = 203/227 (89%), Gaps = 2/227 (0%)

Query: 1   MEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARS 60
           +E LVAPI   E+HK+A DGK   T +N+K+ AP  GGCR+EGYVRVKKVPGNL+ISA S
Sbjct: 258 VEGLVAPIH-PETHKVASDGKSNDTVKNLKK-APVTGGCRVEGYVRVKKVPGNLVISAHS 315

Query: 61  GAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGA 120
           GAHSFD+S+MNMSHV+SHLSFGR +SP++++D++RL+PYLG SHDRL+G++FIN  E GA
Sbjct: 316 GAHSFDSSQMNMSHVVSHLSFGRMISPRLLTDMKRLLPYLGLSHDRLDGKAFINQHEFGA 375

Query: 121 NVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVI 180
           NVTIEHYLQIVKTEVITRR  +EHSL+EEYEYTAHSS+ Q+ Y+P AKFHFELSPMQ++I
Sbjct: 376 NVTIEHYLQIVKTEVITRRSGQEHSLIEEYEYTAHSSVAQTYYLPVAKFHFELSPMQILI 435

Query: 181 TEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKN 227
           TE+PKSFSHFITN+CAIIGGVFTVAGILD+I HNT+RL+KKVE+GKN
Sbjct: 436 TENPKSFSHFITNLCAIIGGVFTVAGILDSIFHNTVRLIKKVELGKN 482

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18402672|ref|NP_566664.1| protein PDI-like 5-3 [Arabidopsis thaliana] gi|75273652|sp|Q9LJU2.1|PDI53_ARATH RecName: Full=Protein disulfide-isomerase 5-3; Short=AtPDIL5-3; AltName: Full=Protein disulfide-isomerase 12; Short=PDI12; AltName: Full=Protein disulfide-isomerase 8-1; Short=AtPDIL8-1; Flags: Precursor gi|11994143|dbj|BAB01164.1| unnamed protein product [Arabidopsis thaliana] gi|15215847|gb|AAK91468.1| AT3g20560/K10D20_9 [Arabidopsis thaliana] gi|332642877|gb|AEE76398.1| protein PDI-like 5-3 [Arabidopsis thaliana]

 Score =  352 bits (902), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 165/227 (72%), Positives = 201/227 (88%), Gaps = 2/227 (0%)

Query: 1   MEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARS 60
           +E LVAPI   E+HK+ALDGK   T +++K+  P  GGCR+EGYVRVKKVPGNL+ISA S
Sbjct: 258 VEGLVAPIH-PETHKVALDGKSNDTVKHLKK-GPVTGGCRVEGYVRVKKVPGNLVISAHS 315

Query: 61  GAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGA 120
           GAHSFD+S+MNMSHV+SH SFGR +SP++++D++RL+PYLG SHDRL+G++FIN  E GA
Sbjct: 316 GAHSFDSSQMNMSHVVSHFSFGRMISPRLLTDMKRLLPYLGLSHDRLDGKAFINQHEFGA 375

Query: 121 NVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVI 180
           NVTIEHYLQ VKTEVITRR  +EHSL+EEYEYTAHSS+ Q+ Y+P AKFHFELSPMQ++I
Sbjct: 376 NVTIEHYLQTVKTEVITRRSGQEHSLIEEYEYTAHSSVAQTYYLPVAKFHFELSPMQILI 435

Query: 181 TEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKN 227
           TE+PKSFSHFITN+CAIIGGVFTVAGILD+I HNT+RL+KKVE+GKN
Sbjct: 436 TENPKSFSHFITNLCAIIGGVFTVAGILDSIFHNTVRLVKKVELGKN 482

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	228
TAIR|locus:2085750	483	PDIL5-3 "PDI-like 5-3" [Arabid	0.986	0.465	0.726	5.9e-89
TAIR|locus:2036371	484	AT1G50950 [Arabidopsis thalian	0.986	0.464	0.691	5.6e-84
TAIR|locus:2136491	532	PDIL5-4 "PDI-like 5-4" [Arabid	0.964	0.413	0.688	1.8e-80
ZFIN|ZDB-GENE-050913-75	290	zgc:114085 "zgc:114085" [Danio	0.828	0.651	0.366	4.6e-25
UNIPROTKB|E2QTE3	290	ERGIC1 "Uncharacterized protei	0.828	0.651	0.356	6.8e-24
UNIPROTKB|E1C2I3	290	ERGIC1 "Uncharacterized protei	0.828	0.651	0.352	1.1e-23
UNIPROTKB|Q969X5	290	ERGIC1 "Endoplasmic reticulum-	0.828	0.651	0.352	1.8e-23
MGI|MGI:1914708	290	Ergic1 "endoplasmic reticulum-	0.828	0.651	0.352	3.8e-23
RGD|1585015	289	Ergic1 "endoplasmic reticulum-	0.828	0.653	0.352	3.8e-23
UNIPROTKB|F1SJY1	290	ERGIC1 "Uncharacterized protei	0.828	0.651	0.352	6.1e-23

TAIR|locus:2085750 PDIL5-3 "PDI-like 5-3" [Arabidopsis thaliana (taxid:3702)]

 Score = 888 (317.7 bits), Expect = 5.9e-89, P = 5.9e-89
 Identities = 165/227 (72%), Positives = 201/227 (88%)

Query:     1 MEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARS 60
             +E LVAPI   E+HK+ALDGK   T +++K+  P  GGCR+EGYVRVKKVPGNL+ISA S
Sbjct:   258 VEGLVAPIH-PETHKVALDGKSNDTVKHLKK-GPVTGGCRVEGYVRVKKVPGNLVISAHS 315

Query:    61 GAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGA 120
             GAHSFD+S+MNMSHV+SH SFGR +SP++++D++RL+PYLG SHDRL+G++FIN  E GA
Sbjct:   316 GAHSFDSSQMNMSHVVSHFSFGRMISPRLLTDMKRLLPYLGLSHDRLDGKAFINQHEFGA 375

Query:   121 NVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVI 180
             NVTIEHYLQ VKTEVITRR  +EHSL+EEYEYTAHSS+ Q+ Y+P AKFHFELSPMQ++I
Sbjct:   376 NVTIEHYLQTVKTEVITRRSGQEHSLIEEYEYTAHSSVAQTYYLPVAKFHFELSPMQILI 435

Query:   181 TEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKN 227
             TE+PKSFSHFITN+CAIIGGVFTVAGILD+I HNT+RL+KKVE+GKN
Sbjct:   436 TENPKSFSHFITNLCAIIGGVFTVAGILDSIFHNTVRLVKKVELGKN 482

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0003756 "protein disulfide isomerase activity" evidence=ISS

GO:0030244 "cellulose biosynthetic process" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2036371 AT1G50950 [Arabidopsis thaliana (taxid:3702)]

 Score = 841 (301.1 bits), Expect = 5.6e-84, P = 5.6e-84
 Identities = 157/227 (69%), Positives = 195/227 (85%)

Query:     1 MEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARS 60
             +EEL+ PI  +E HKLALDGK    A   K+ AP +GGCRIEGYVR KKVPG L+ISA S
Sbjct:   259 VEELLKPIK-KEDHKLALDGKSDNAASTFKK-APVSGGCRIEGYVRAKKVPGELVISAHS 316

Query:    61 GAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGA 120
             GAHSFD S+MNMSH+++HL+FG  +S ++ +D++RL+PYLG S+DRLNG+SFIN R++ A
Sbjct:   317 GAHSFDASQMNMSHIVTHLTFGTMVSERLWTDMKRLLPYLGQSYDRLNGKSFINERQLDA 376

Query:   121 NVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVI 180
             NVTIEHYLQI+KTEVI+RR  +EHSL+EEYEYTAHSS+ +S + P AKFHFELSPMQV+I
Sbjct:   377 NVTIEHYLQIIKTEVISRRSGQEHSLIEEYEYTAHSSVARSYHYPEAKFHFELSPMQVLI 436

Query:   181 TEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKN 227
             +E+PKSFSHFITNVCAIIGGVFTVAGILD+I  NT+R++KK+E+GKN
Sbjct:   437 SENPKSFSHFITNVCAIIGGVFTVAGILDSIFQNTVRMVKKIELGKN 483

GO:0045454 "cell redox homeostasis" evidence=IEA

TAIR|locus:2136491 PDIL5-4 "PDI-like 5-4" [Arabidopsis thaliana (taxid:3702)]

 Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
 Identities = 155/225 (68%), Positives = 189/225 (84%)

Query:     4 LVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAH 63
             LV PI LE  H LAL+ K   ++  +K+ AP  GGCR+EGY+RVKKVPGNL++SARSG+H
Sbjct:   313 LVEPIHLEP-HNLALEDKSDNSSRTLKK-APSTGGCRVEGYMRVKKVPGNLMVSARSGSH 370

Query:    64 SFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVT 123
             SFD+S+MNMSHV++HLSFGR++ P+  S+ +RL PYLG SHDRL+GRSFIN R++G NVT
Sbjct:   371 SFDSSQMNMSHVVNHLSFGRRIMPQKFSEFKRLSPYLGLSHDRLDGRSFINQRDLGPNVT 430

Query:   124 IEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITED 183
             IEHYLQIVKTEV+    S   +L+E YEYTAHSS+  S Y+P AKFHFELSPMQV+ITE+
Sbjct:   431 IEHYLQIVKTEVVK---SNGQALVEAYEYTAHSSVAHSYYLPVAKFHFELSPMQVLITEN 487

Query:   184 PKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMKKVEIGKNF 228
              KSFSHFITNVCAIIGGVFTVAGILD+ILH++M LMKK+E+GKNF
Sbjct:   488 SKSFSHFITNVCAIIGGVFTVAGILDSILHHSMTLMKKIELGKNF 532

GO:0005634 "nucleus" evidence=ISM

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0003756 "protein disulfide isomerase activity" evidence=ISS

GO:0019932 "second-messenger-mediated signaling" evidence=RCA

GO:0005783 "endoplasmic reticulum" evidence=IDA

ZFIN|ZDB-GENE-050913-75 zgc:114085 "zgc:114085" [Danio rerio (taxid:7955)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 78/213 (36%), Positives = 115/213 (53%)

Query:    20 GKHKTT-AEN-VKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVIS 77
             G+H+    EN +K P     GCR EG   + KVPGN  +S  S   +      +M+H+I 
Sbjct:    94 GRHEVGHIENSMKVPLNNGHGCRFEGEFSINKVPGNFHVSTHSA--TAQPQSPDMTHIIH 151

Query:    78 HLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKT--EV 135
              L+FG KL    +  VQ     LGG+ DRL   +  +H         ++ L+IV T  E 
Sbjct:   152 KLAFGAKLQ---VQHVQGAFNALGGA-DRLQSNALASH---------DYILKIVPTVYEE 198

Query:   136 I--TRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITN 193
             +   +R+S ++++  + EY A+S   +   IPA  F ++LSP+ V  TE  + F  FIT 
Sbjct:   199 LGGKQRFSYQYTVANK-EYVAYSHTGR--IIPAIWFRYDLSPITVKYTERRRPFYRFITT 255

Query:   194 VCAIIGGVFTVAGILDAILHNTMRLMKKVEIGK 226
             +CAIIGG FTVAGI+D+ +       KK++IGK
Sbjct:   256 ICAIIGGTFTVAGIIDSCIFTASEAWKKIQIGK 288

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

UNIPROTKB|E2QTE3 ERGIC1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 76/213 (35%), Positives = 110/213 (51%)

Query:    20 GKHKTT-AENVKR-PAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVIS 77
             G+H+    +N  R P     GCR EG+  + KVPGN  +S  S   +      +M+HVI 
Sbjct:    94 GRHEVGHIDNSMRIPVNNGAGCRFEGHFSINKVPGNFHVSTHSA--TAQPQNPDMTHVIH 151

Query:    78 HLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVIT 137
              LSFG  L    + +V      LGG+ DRL      +H         ++ L+IV T    
Sbjct:   152 KLSFGDTLQ---VQNVHGAFNALGGA-DRLTSNPLASH---------DYILKIVPTVYED 198

Query:   138 R----RYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITN 193
             +    RYS ++++  + EY A+S   +   IPA  F ++LSP+ V  TE  +    FIT 
Sbjct:   199 KSGKQRYSYQYTVANK-EYVAYSHTGR--IIPAIWFRYDLSPITVKYTERRQPLYRFITT 255

Query:   194 VCAIIGGVFTVAGILDAILHNTMRLMKKVEIGK 226
             +CAIIGG FTVAGILD+ +       KK+++GK
Sbjct:   256 ICAIIGGTFTVAGILDSCIFTASEAWKKIQLGK 288

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IEA

UNIPROTKB|E1C2I3 ERGIC1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 75/213 (35%), Positives = 116/213 (54%)

Query:    20 GKHKTT-AEN-VKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVIS 77
             G+H+    +N +K P     GCR EG+  + KVPGN  +S  S   +      +M+H+I 
Sbjct:    94 GRHEVGHIDNSMKIPLNNGDGCRFEGHFSINKVPGNFHVSTHSA--TAQPQNPDMTHIIH 151

Query:    78 HLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKT--EV 135
              LSFG KL    + +V      L G+ D+L+     +H         ++ L+IV T  E 
Sbjct:   152 KLSFGDKLQ---VQNVHGAFNALEGA-DKLSSNPLASH---------DYILKIVPTVYED 198

Query:   136 IT--RRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITN 193
             ++  +RYS ++++  + EY A+S   +   IPA  F ++LSP+ V  TE  +    FIT+
Sbjct:   199 MSGKQRYSYQYTVANK-EYVAYSHTGR--IIPAIWFRYDLSPITVKYTERRQPLYRFITS 255

Query:   194 VCAIIGGVFTVAGILDAILHNTMRLMKKVEIGK 226
             +CAIIGG FTVAGILD+ +       KK+++GK
Sbjct:   256 ICAIIGGTFTVAGILDSCIFTASEAWKKIQLGK 288

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IEA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA

UNIPROTKB|Q969X5 ERGIC1 "Endoplasmic reticulum-Golgi intermediate compartment protein 1" [Homo sapiens (taxid:9606)]

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 75/213 (35%), Positives = 110/213 (51%)

Query:    20 GKHKTT-AEN-VKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVIS 77
             G+H+    +N +K P     GCR EG   + KVPGN  +S  S   +      +M+HVI 
Sbjct:    94 GRHEVGHIDNSMKIPLNNGAGCRFEGQFSINKVPGNFHVSTHSA--TAQPQNPDMTHVIH 151

Query:    78 HLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVIT 137
              LSFG  L    + ++      LGG+ DRL      +H         ++ L+IV T    
Sbjct:   152 KLSFGDTLQ---VQNIHGAFNALGGA-DRLTSNPLASH---------DYILKIVPTVYED 198

Query:   138 R----RYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITN 193
             +    RYS ++++  + EY A+S   +   IPA  F ++LSP+ V  TE  +    FIT 
Sbjct:   199 KSGKQRYSYQYTVANK-EYVAYSHTGR--IIPAIWFRYDLSPITVKYTERRQPLYRFITT 255

Query:   194 VCAIIGGVFTVAGILDAILHNTMRLMKKVEIGK 226
             +CAIIGG FTVAGILD+ +       KK+++GK
Sbjct:   256 ICAIIGGTFTVAGILDSCIFTASEAWKKIQLGK 288

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IDA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

MGI|MGI:1914708 Ergic1 "endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1" [Mus musculus (taxid:10090)]

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 75/213 (35%), Positives = 109/213 (51%)

Query:    20 GKHKTT-AEN-VKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVIS 77
             G+H+    +N +K P     GCR EG   + KVPGN  +S  S   +      +M+H I 
Sbjct:    94 GRHEVGHIDNSMKIPLNNGAGCRFEGQFSINKVPGNFHVSTHSA--TAQPQNPDMTHTIH 151

Query:    78 HLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVIT 137
              LSFG  L    + +V      LGG+ DRL      +H         ++ L+IV T    
Sbjct:   152 KLSFGDTLQ---VQNVHGAFNALGGA-DRLTSNPLASH---------DYILKIVPTVYED 198

Query:   138 R----RYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITN 193
             +    RYS ++++  + EY A+S   +   IPA  F ++LSP+ V  TE  +    FIT 
Sbjct:   199 KSGKQRYSYQYTVANK-EYVAYSHTGR--IIPAIWFRYDLSPITVKYTERRQPLYRFITT 255

Query:   194 VCAIIGGVFTVAGILDAILHNTMRLMKKVEIGK 226
             +CAIIGG FTVAGILD+ +       KK+++GK
Sbjct:   256 ICAIIGGTFTVAGILDSCIFTASEAWKKIQLGK 288

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

RGD|1585015 Ergic1 "endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1" [Rattus norvegicus (taxid:10116)]

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 75/213 (35%), Positives = 110/213 (51%)

Query:    20 GKHKTT-AEN-VKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVIS 77
             G+H+    +N +K P     GCR EG   + KVPGN  +S  S   +      +M+H+I 
Sbjct:    93 GRHEVGHIDNSMKIPLNNGVGCRFEGQFSINKVPGNFHVSTHSA--TAQPQNPDMTHIIH 150

Query:    78 HLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVIT 137
              LSFG  L    + +V      LGG+ DRL      +H         ++ L+IV T    
Sbjct:   151 KLSFGDTLQ---VQNVHGAFNALGGA-DRLTSNPLASH---------DYILKIVPTVYED 197

Query:   138 R----RYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITN 193
             +    RYS ++++  + EY A+S   +   IPA  F ++LSP+ V  TE  +    FIT 
Sbjct:   198 KSGKQRYSYQYTVANK-EYVAYSHTGR--IIPAIWFRYDLSPITVKYTERRQPLYRFITT 254

Query:   194 VCAIIGGVFTVAGILDAILHNTMRLMKKVEIGK 226
             +CAIIGG FTVAGILD+ +       KK+++GK
Sbjct:   255 ICAIIGGTFTVAGILDSCIFTASEAWKKIQLGK 287

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IEA;ISO

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA;ISO

UNIPROTKB|F1SJY1 ERGIC1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 75/213 (35%), Positives = 110/213 (51%)

Query:    20 GKHKTT-AEN-VKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVIS 77
             G+H+    +N +K P     GCR EG   + KVPGN  +S  S   +      +M+HVI 
Sbjct:    94 GRHEVGHIDNSMKIPLNDGVGCRFEGQFSINKVPGNFHVSTHSA--TAQPPNPDMTHVIH 151

Query:    78 HLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVIT 137
              LSFG  L    + ++      LGG+ DRL      +H         ++ L+IV T    
Sbjct:   152 KLSFGDTLQ---VQNIHGAFNALGGA-DRLTSNPLASH---------DYILKIVPTVYED 198

Query:   138 R----RYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVVITEDPKSFSHFITN 193
             +    RYS ++++  + EY A+S   +   IPA  F ++LSP+ V  TE  +    FIT 
Sbjct:   199 KSGKQRYSYQYTVANK-EYVAYSHTGR--IIPAIWFRYDLSPITVKYTERRQPLYRFITT 255

Query:   194 VCAIIGGVFTVAGILDAILHNTMRLMKKVEIGK 226
             +CAIIGG FTVAGILD+ +       KK+++GK
Sbjct:   256 ICAIIGGTFTVAGILDSCIFTASEAWKKIQLGK 288

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LJU2	PDI53_ARATH	No assigned EC number	0.7268	0.9868	0.4658	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	228
pfam07970	222	pfam07970, COPIIcoated_ERV, Endoplasmic reticulum	1e-36

>gnl|CDD|219673 pfam07970, COPIIcoated_ERV, Endoplasmic reticulum vesicle transporter

 Score =  127 bits (322), Expect = 1e-36
 Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 42/191 (21%)

Query: 38  GCRIEGYVRVKKVPGNLIISAR-----SGAHSFDTS-----EMNMSHVISHLSFGRKLSP 87
           GCR++G + V +V GN  I+        G H  D S     ++N SH I+HLSFG +   
Sbjct: 55  GCRVKGTLEVNRVAGNFHIAPGRSFQEKGGHVHDLSLFTDEKLNFSHTINHLSFGEE--- 111

Query: 88  KVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYSREHSLL 147
                      + GG  + L+G +     + G      ++L++V T     RY   + L+
Sbjct: 112 -----------FPGGVTNPLDGTTKFVQTDKG-YHMYSYFLKVVPT-----RYESLNGLI 154

Query: 148 EE-YEYTAHSSLVQSIYIPAAK--------FHFELSPMQVVITEDPKSFSHFITNVCAII 198
            E  +Y+  S       +            F+++ SP++V+ TED +SFSHF+TN+CAII
Sbjct: 155 VETNQYSVTSH---DRPVTGGSRGGVPGVFFNYDFSPIKVINTEDRQSFSHFLTNLCAII 211

Query: 199 GGVFTVAGILD 209
           GGVF VAG++D
Sbjct: 212 GGVFAVAGLID 222

This family is conserved from plants and fungi to humans. Erv46 works in close conjunction with Erv41 and together they form a complex which cycles between the endoplasmic reticulum and Golgi complex. Erv46-41 interacts strongly with the endoplasmic reticulum glucosidase II. Mammalian glucosidase II comprises a catalytic alpha-subunit and a 58 kDa beta subunit, which is required for ER localisation. All proteins identified biochemically as Erv41p-Erv46p interactors are localised to the early secretory pathway and are involved in protein maturation and processing in the ER and/or sorting into COPII vesicles for transport to the Golgi. Length = 222

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	228
KOG2667	379	consensus COPII vesicle protein [Intracellular tra	100.0
PF07970	222	COPIIcoated_ERV: Endoplasmic reticulum vesicle tra	100.0

>KOG2667 consensus COPII vesicle protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=4.5e-56  Score=406.50  Aligned_cols=178  Identities=42%  Similarity=0.662  Sum_probs=155.4

Q ss_pred             ccCCCCCCCCceEEEEEEEeeeceEEEEEeC-----CCCCCCCCC---CCcccEEEeEeeecCCCCccchhhhhhcccCC
Q 027071           29 VKRPAPKAGGCRIEGYVRVKKVPGNLIISAR-----SGAHSFDTS---EMNMSHVISHLSFGRKLSPKVMSDVQRLIPYL  100 (228)
Q Consensus        29 ~~~~~~~~eGCrI~G~~~VnkV~GnfhIs~~-----~~~h~~~~~---~~N~SH~I~~LsFG~~~~~~~~~~~~~~~~~~  100 (228)
                      .+.+.+.+|||||+|++.||||||||||+|+     +..|.++..   .+||||+|||||||+.+|              
T Consensus       187 ~~~~~~~geGCRi~G~l~VNKVaGnfHia~g~~~~~~~~h~hd~~~~~~~n~SH~InhLSFG~~~p--------------  252 (379)
T KOG2667|consen  187 NKAAEQKGEGCRIYGQLEVNKVAGNFHIAPGKSSQHSNAHVHDLSLLDNLNFSHRINHLSFGEYIP--------------  252 (379)
T ss_pred             cccCCCCCCceEEEEEEEEeeecceEEEccCCCccccccccchhhhcccCCceEEEeeeccCCCCc--------------
Confidence            3456788999999999999999999999985     234666653   799999999999999875              


Q ss_pred             CCCcCCCCCceeeeecccCCceeeeEEEEEEEEEEEecccccccceeeeeEE--Eeeeecc----cCCCCCeEEEEEecc
Q 027071          101 GGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYSREHSLLEEYEY--TAHSSLV----QSIYIPAAKFHFELS  174 (228)
Q Consensus       101 ~~~~~PLdg~~~~~~~~~~~~~~~~YylkvVPT~y~~~~~~~~~~~~~tyQY--T~~~~~~----~~~~~PgIfF~Yd~S  174 (228)
                       +..|||||+.+   ...++..+|+||+|||||.|.+..+..    +.||||  |+++...    ...++|||||.||+|
T Consensus       253 -~~~nPLdG~~~---~~~~~~~~~~Yf~KvVPT~y~~~~~~~----~~T~QysVt~~~~~~~~~~~~~~~PGifF~YelS  324 (379)
T KOG2667|consen  253 -GIVNPLDGTNF---IANEHLTTFQYFLKVVPTVYKYKSGRV----IDTNQYSVTEYEYVLHSHRAKSGIPGIFFKYELS  324 (379)
T ss_pred             -ccccCCCCccc---cccCCccceeeEEEEcceEEEeecCce----ecceeeeeeeeEEeccccccccCCCeEEEEEecC
Confidence             78899999877   445668999999999999999777654    799999  5555432    234899999999999


Q ss_pred             ceEEEEEeecchhHHHHHhHhhhhcceeehhHHHHHHHHHHHHHhh-hhhcCCCC
Q 027071          175 PMQVVITEDPKSFSHFITNVCAIIGGVFTVAGILDAILHNTMRLMK-KVEIGKNF  228 (228)
Q Consensus       175 Pi~V~~~e~r~sf~~Flt~lcAIIGGvftv~gliD~~i~~~~~~~k-k~~~gk~~  228 (228)
                      ||+|+++|+|+||+||||++||||||+||||||||++++++++++| |.++||++
T Consensus       325 Pl~V~v~E~r~sf~~Flt~lCAIiGGvftvagiid~~~~~~~~~i~~k~~~gk~~  379 (379)
T KOG2667|consen  325 PLMVKVTEERQSFSHFLTRLCAIIGGVFTVAGILDSLLYHILELIKGKIALGKYT  379 (379)
T ss_pred             ceEEEEEeccccHHHHHHHHHHHhcceeehHHHHHHHHHHHHHHHhcchhhhccC
Confidence            9999999999999999999999999999999999999999999997 89999974

>PF07970 COPIIcoated_ERV: Endoplasmic reticulum vesicle transporter ; InterPro: IPR012936 This domain occurs in many hypothetical proteins, and also two partially characterised proteins

Probab=100.00  E-value=1.3e-52  Score=362.78  Aligned_cols=161  Identities=42%  Similarity=0.713  Sum_probs=135.7

Q ss_pred             ccCCCCCCCCceEEEEEEEeeeceEEEEEeCC-----CCCCCC-----CC-CCcccEEEeEeeecCCCCccchhhhhhcc
Q 027071           29 VKRPAPKAGGCRIEGYVRVKKVPGNLIISARS-----GAHSFD-----TS-EMNMSHVISHLSFGRKLSPKVMSDVQRLI   97 (228)
Q Consensus        29 ~~~~~~~~eGCrI~G~~~VnkV~GnfhIs~~~-----~~h~~~-----~~-~~N~SH~I~~LsFG~~~~~~~~~~~~~~~   97 (228)
                      ++.....+|||||+|++.||||+|||||+++.     ..|.++     .. .+||||+|||||||++++           
T Consensus        46 ~~~~~~~~egCri~G~l~VnkV~Gnfhi~~g~~~~~~~~h~hd~~~~~~~~~~N~SH~I~~lsFG~~~~-----------  114 (222)
T PF07970_consen   46 IKEQVNEGEGCRIYGSLEVNKVPGNFHIAPGRSFQQDGGHIHDLSPFDDEPKFNFSHTINHLSFGEEIP-----------  114 (222)
T ss_pred             hhhhccCCCCCEEEEEEEEEEEEEEEEEEecchhccCCcceeehhhhccccCCCCCeEEEEEEeccccc-----------
Confidence            34456678999999999999999999999975     234322     22 799999999999999876           


Q ss_pred             cCCCCCcCCCCCceeeeecccCCceeeeEEEEEEEEEEEecccccccceeeeeEEE--eeeeccc---CCCCCeEEEEEe
Q 027071           98 PYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYSREHSLLEEYEYT--AHSSLVQ---SIYIPAAKFHFE  172 (228)
Q Consensus        98 ~~~~~~~~PLdg~~~~~~~~~~~~~~~~YylkvVPT~y~~~~~~~~~~~~~tyQYT--~~~~~~~---~~~~PgIfF~Yd  172 (228)
                          +..|||||+.++. ..+....+|+||||||||+|.+.++..    ++||||+  ++.+...   ..++|||||+||
T Consensus       115 ----~~~~PLdg~~~~~-~~~~~~~~~~YflkvVPT~y~~~~~~~----~~t~qYsvt~~~~~~~~~~~~~~PGI~F~Yd  185 (222)
T PF07970_consen  115 ----GIVNPLDGTQKIV-QTDNGNYMYQYFLKVVPTTYEDLDGFS----IETYQYSVTEHSRPLNGGSSGGLPGIFFKYD  185 (222)
T ss_pred             ----cccccccCccccc-cCCCCceeEEEEEEEeeeeeEeccccc----cccccccceeeeeeccCCCCCCCceEEEEEe
Confidence                4568999998842 234568999999999999999987653    5899995  4444432   268999999999


Q ss_pred             ccceEEEEEeecchhHHHHHhHhhhhcceeehhHHHH
Q 027071          173 LSPMQVVITEDPKSFSHFITNVCAIIGGVFTVAGILD  209 (228)
Q Consensus       173 ~SPi~V~~~e~r~sf~~Flt~lcAIIGGvftv~gliD  209 (228)
                      ||||+|+++++|+||+||||+|||||||||||+||||
T Consensus       186 ~SPi~v~~~~~r~s~~~flt~lcaIiGGvftv~gliD  222 (222)
T PF07970_consen  186 FSPIMVVITEDRKSFLHFLTRLCAIIGGVFTVAGLID  222 (222)
T ss_pred             ceeEEEEEEEecCCHHHHHHHHHHHhchHheEEEecC
Confidence            9999999999999999999999999999999999998

One of these proteins, PTX1 Q96RQ1 from SWISSPROT, is a homeodomain-containing transcription factor involved in regulating all pituitary hormone genes []. This protein is down regulated in prostate carcinoma []. The other protein, ERGIC-32 Q969X5 from SWISSPROT, is involved in protein transport from the ER to the Golgi [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00