Citrus Sinensis ID: 027121

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
Protein Sequence
MPIYTSSSESDNEPSRPSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKKMFRRFNSQFLNKIPRGPVKEN
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccHHHHcccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccHcccccccHHHHcccccHHHEEEEHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
mpiytsssesdnepsrpsrttprprpprllgsqkpihdilgggkVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWskgaeffnwkppqipevilrESTFREVASTLRVRFNKILSKLLDvacgkdpglFILVIAILYIFSVIGTYFSFLNLLYLGFICiltvpflydrydeHVDYIADREFRRMKKMFRRFNSQflnkiprgpvken
Flexible Loop (DISEMBL)
mpiytsssesdnepsrpsrttprprpprllgsqkpihdILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKKMFRRFnsqflnkiprgpvken
Low Complexity Region (SEG)
MPIYTSSSESDNEpsrpsrttprprpprLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREfrrmkkmfrrfNSQFLNKIPRGPVKEN
Disordered region (IsUnstruct)
***********************************IHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKKMFRRFNSQFL***********
Disordered Region (DISOPRED)
***************************************LGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKKMFRRFNSQFL****R******
Disordered Region (DISEMBL)
************************RPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKKMFRRFNSQFLNKIPRGPVKEN
Disordered Region (DISPRO)
*************************PPRLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKKMFRRFNSQFLNKIPR******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MPIYTSSSESDNEPSRPSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKKMFRRFNSQFLNKIPRGPVKEN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	228	2.2.26 [Sep-21-2011]
Q9LJQ5	225	Reticulon-like protein B9	yes	no	0.973	0.986	0.521	3e-68
Q9SUT9	271	Reticulon-like protein B2	no	no	0.881	0.741	0.398	8e-47
Q9SUR3	275	Reticulon-like protein B1	no	no	0.872	0.723	0.407	4e-46
O82352	255	Reticulon-like protein B5	no	no	0.934	0.835	0.4	2e-45
Q6DBN4	253	Reticulon-like protein B6	no	no	0.929	0.837	0.401	1e-44
Q9FFS0	257	Reticulon-like protein B4	no	no	0.881	0.782	0.4	1e-42
Q9SH59	255	Reticulon-like protein B3	no	no	0.864	0.772	0.402	2e-42
Q9SS37	247	Reticulon-like protein B8	no	no	0.969	0.894	0.345	1e-39
A2RVT6	215	Reticulon-like protein B1	no	no	0.807	0.855	0.418	1e-35
Q9M145	244	Reticulon-like protein B7	no	no	0.899	0.840	0.377	1e-32

>sp|Q9LJQ5|RTNLI_ARATH Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1

 Score =  258 bits (658), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 119/228 (52%), Positives = 169/228 (74%), Gaps = 6/228 (2%)

Query: 1   MPIYTSSSESDNEPSRPSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASL 60
           MPI+T SS SD+E  R    T +     L   Q+ IH I GGGKVAD+LLW+   ++A+L
Sbjct: 1   MPIFTGSS-SDSEDERTIHKTTK-----LFTRQRSIHSIFGGGKVADILLWREPKIAATL 54

Query: 61  LIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTF 120
           +IG++++WFL EVVEYNF+TL+CH S+TSML  FIWS  ++F NW+ P IPEV+L ES+F
Sbjct: 55  VIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSF 114

Query: 121 REVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICI 180
           +++A +  VRFN+IL+KLLDVACG+DP LF L    LYI S+IGTYF+F+NLL++GF+ +
Sbjct: 115 KQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSM 174

Query: 181 LTVPFLYDRYDEHVDYIADREFRRMKKMFRRFNSQFLNKIPRGPVKEN 228
            T+P +Y+ Y++ VD  A +  R+MKK++++ ++  L+KIPRG VK  
Sbjct: 175 QTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTVKNK 222

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUT9|RTNLB_ARATH Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1

 Score =  186 bits (473), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 80/201 (39%), Positives = 130/201 (64%)

Query: 28  RLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISI 87
           RL G ++P+H +LGGGK AD+ +WK+  +S  +  G TV W LFE++EY+ +TLLCH+ I
Sbjct: 68  RLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMI 127

Query: 88  TSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDP 147
            ++  LF+WS    F +  PP+IPEV + E    ++AS LR+  N+ +S L ++A G+D 
Sbjct: 128 VALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDI 187

Query: 148 GLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKK 207
             F+  IA L++ S++G  +SFL L Y+  + + TVP  YD+Y++ VD   ++    +KK
Sbjct: 188 KKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKK 247

Query: 208 MFRRFNSQFLNKIPRGPVKEN 228
            +   +++  +KIPRGP+K+ 
Sbjct: 248 QYAVLDAKVFSKIPRGPLKDK 268

Plays a role in the Agrobacterium-mediated plant transformation via its interaction with VirB2, the major component of the T-pilus.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUR3|RTNLA_ARATH Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1

 Score =  184 bits (468), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 128/199 (64%)

Query: 28  RLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISI 87
           RL G ++P+H +LGGGK AD+ +WKN  +S  +L G T  W +FE++EY+ +TLLCH+ I
Sbjct: 72  RLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMI 131

Query: 88  TSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDP 147
             +  LF+WS    F N  PP+IPEV + E    ++AS LR+  N+  S L ++A G+D 
Sbjct: 132 VVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDL 191

Query: 148 GLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKK 207
             F++ IA L++ S++G  F+FL L Y+  + + TVP  YD+Y++ VD + ++    +KK
Sbjct: 192 KKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKK 251

Query: 208 MFRRFNSQFLNKIPRGPVK 226
            +   + + L+KIP GP+K
Sbjct: 252 QYAVLDEKVLSKIPLGPLK 270

Plays a role in the Agrobacterium-mediated plant transformation via its interaction with VirB2, the major component of the T-pilus.

Arabidopsis thaliana (taxid: 3702)

>sp|O82352|RTNLE_ARATH Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1

 Score =  182 bits (461), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 86/215 (40%), Positives = 138/215 (64%), Gaps = 2/215 (0%)

Query: 12  NEPSRPSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLF 71
            +P  PS    + +  R+ G +KP+H +LGGGK ADV LW++  +S ++L   T IW LF
Sbjct: 37  EKPDSPSAV--KAKIYRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLF 94

Query: 72  EVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRF 131
           E+VEY+ ++LLCHISI ++  LF+WS      N   PQIPE+ + E  F  VAS+LR   
Sbjct: 95  ELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNEL 154

Query: 132 NKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYD 191
           N+    L  +A G+D   F++V+  L+I SV+G +F+FL L+Y+ F+ + TVP LY++++
Sbjct: 155 NQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHE 214

Query: 192 EHVDYIADREFRRMKKMFRRFNSQFLNKIPRGPVK 226
           + VD +A++  + ++K +  F+ + L+KIP   +K
Sbjct: 215 DKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLK 249

Arabidopsis thaliana (taxid: 3702)

>sp|Q6DBN4|RTNLF_ARATH Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1

 Score =  179 bits (455), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 86/214 (40%), Positives = 139/214 (64%), Gaps = 2/214 (0%)

Query: 13  EPSRPSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFE 72
           +P  PS    + +  RL G +KP+H +LGGG  ADV LW++  +SAS+L   T IW LFE
Sbjct: 38  KPESPSAL--KAKIYRLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFE 95

Query: 73  VVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFN 132
           +VEY+F++L+CHI I ++ ALF+ S    F N  PP+IPE+ ++E  F  + S LR   N
Sbjct: 96  LVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELN 155

Query: 133 KILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDE 192
           +    L  +A G+D   F++V+  L+I SV+G +F+FL L+Y+ F+ + TVP LY+++++
Sbjct: 156 QAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHED 215

Query: 193 HVDYIADREFRRMKKMFRRFNSQFLNKIPRGPVK 226
            VD +A++  + +KK +  F+ + L+K+P   +K
Sbjct: 216 KVDPVAEKTLKELKKHYMVFDEKVLSKLPVASLK 249

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFS0|RTNLD_ARATH Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1

 Score =  173 bits (438), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 82/205 (40%), Positives = 127/205 (61%), Gaps = 4/205 (1%)

Query: 28  RLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISI 87
           RL G +KP+H +LGGGK AD+ LW+N  VS  +L  +T  W LFE+ EY+ +  LCH +I
Sbjct: 51  RLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAI 110

Query: 88  TSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDP 147
            ++ ALF+WS    F +   P IPEV + E    ++ S LR+  N+ L+ L ++A GKD 
Sbjct: 111 FALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDV 170

Query: 148 GLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKK 207
             FILVIA L++ S+IG+ ++FL L Y   + + T+P LY++Y++ VD   ++  R +KK
Sbjct: 171 KKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKK 230

Query: 208 MFRRFNSQFL----NKIPRGPVKEN 228
            +   + + L    +KIPRG + + 
Sbjct: 231 QYAVLDEKVLRKVISKIPRGALNKK 255

Plays a role in the Agrobacterium-mediated plant transformation via its interaction with VirB2, the major component of the T-pilus.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SH59|RTNLC_ARATH Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1

 Score =  172 bits (435), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 81/201 (40%), Positives = 128/201 (63%), Gaps = 4/201 (1%)

Query: 28  RLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISI 87
           RL G ++P+H + GGGK AD+ LW+N  VS  +L   TV W LFE++EYN +TL  HISI
Sbjct: 47  RLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISI 106

Query: 88  TSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDP 147
            ++  LF+WS  + F +  P  IPEV + E    ++AS LR+  N+  + L D+A G+D 
Sbjct: 107 LALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDL 166

Query: 148 GLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKK 207
             F+LVIA L++ S +G+  +FL L+Y+  + + T+P LY++Y++ VD   ++  R +KK
Sbjct: 167 KKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKK 226

Query: 208 MFRRFN----SQFLNKIPRGP 224
            +  F+    S+ ++KIP+G 
Sbjct: 227 QYVEFDVKVLSKVMSKIPKGA 247

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SS37|RTNLH_ARATH Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1 SV=1

 Score =  163 bits (412), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 132/223 (59%), Gaps = 2/223 (0%)

Query: 4   YTSSSESDNEPSR--PSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASLL 61
           +T + + +   S       +   R  RL   QKPIH +LGGGK ADVLLW+N  +SAS+L
Sbjct: 18  FTETVQKNKHGSSFFEQEDSVSSRFNRLFDRQKPIHHVLGGGKSADVLLWRNKKISASVL 77

Query: 62  IGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFR 121
           +G T IW LFE + ++F++L+C+  +  M+A F+WS  + F N    ++P ++L +  F 
Sbjct: 78  MGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPRLVLPKDFFA 137

Query: 122 EVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICIL 181
           EV   +    N+ L  L D+AC  +   F++ +  L++ +++G+  +FL +LY+GF+   
Sbjct: 138 EVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTVLYIGFVGAH 197

Query: 182 TVPFLYDRYDEHVDYIADREFRRMKKMFRRFNSQFLNKIPRGP 224
           T+P LY+RY++ VD   D    +    +++ ++ FL++IP G 
Sbjct: 198 TMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLSRIPSGK 240

Arabidopsis thaliana (taxid: 3702)

>sp|A2RVT6|RTNLN_ARATH Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2 SV=2

 Score =  149 bits (376), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 82/196 (41%), Positives = 120/196 (61%), Gaps = 12/196 (6%)

Query: 36  IHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFI 95
           ++  LGGG+ AD++ WKN   S ++L   T+IWFLFEVVEY F+T LC I +  +    I
Sbjct: 22  LYHNLGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLI 81

Query: 96  WS--KGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKI---LSKLLDVACGKDPGLF 150
           WS    ++    KPP I ++ + ES +R +       FNKI   + KL D++ GKD  L 
Sbjct: 82  WSYIGSSQLIQSKPPSINDLRISESNWRFL-------FNKINWFIIKLYDISSGKDFRLL 134

Query: 151 ILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKKMFR 210
            L +  L+I SV+G YFS L LLY+ F+ + T+P LY++Y+E + Y A +  R MKK+  
Sbjct: 135 FLAVVSLWILSVVGNYFSSLTLLYIVFVGLETIPMLYEQYEEELTYAASKSGRDMKKLLN 194

Query: 211 RFNSQFLNKIPRGPVK 226
           +FNS+ +NKIP+   K
Sbjct: 195 KFNSKVINKIPKAQAK 210

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M145|RTNLG_ARATH Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=3 SV=2

 Score =  139 bits (351), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 121/209 (57%), Gaps = 4/209 (1%)

Query: 15  SRPSRTTPRPRPP-RLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEV 73
            +P    P   P  R+ G ++PIH +LGGGK ADVLLW++  V+  LL  +TVIW LF  
Sbjct: 39  EKPDSPVPINAPIYRMFGRERPIHMVLGGGKPADVLLWRDKKVTLGLLSAVTVIWLLFGF 98

Query: 74  VEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNK 133
                +T LC  SI  +L  F+WS      N  P  + ++ + E    + AS +    N 
Sbjct: 99  GGRRLLTSLCRGSILFLLLSFLWSNA---LNKSPENMMDIYIPEKPLLQAASAMTFELNC 155

Query: 134 ILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEH 193
             + L  +A  +D   F++ +  L++ SVIG +FSFL+LLY+ F+ I TVP LY++Y++ 
Sbjct: 156 AFATLRSIALERDIKNFVMAVIGLWLVSVIGNWFSFLSLLYICFVLIHTVPMLYEKYEDE 215

Query: 194 VDYIADREFRRMKKMFRRFNSQFLNKIPR 222
           +D IA++    MKK ++ F ++FL+KIP 
Sbjct: 216 IDPIAEKAVIEMKKHYQVFEAKFLSKIPH 244

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	228
224121258	221	predicted protein [Populus trichocarpa]	0.947	0.977	0.596	3e-70
449439423	219	PREDICTED: reticulon-like protein B9-lik	0.894	0.931	0.6	4e-69
224133136	221	predicted protein [Populus trichocarpa]	0.956	0.986	0.578	1e-68
21592845	225	unknown [Arabidopsis thaliana]	0.973	0.986	0.521	2e-66
18401821	225	reticulon-like protein B9 [Arabidopsis t	0.973	0.986	0.521	2e-66
356520621	222	PREDICTED: reticulon-like protein B9-lik	0.942	0.968	0.551	9e-66
297834728	225	reticulon family protein [Arabidopsis ly	0.969	0.982	0.504	9e-65
351721651	222	uncharacterized protein LOC100527903 [Gl	0.942	0.968	0.562	1e-64
388494646	226	unknown [Lotus japonicus]	0.929	0.938	0.522	6e-60
388491750	233	unknown [Lotus japonicus]	0.925	0.905	0.520	2e-59

>gi|224121258|ref|XP_002318538.1| predicted protein [Populus trichocarpa] gi|222859211|gb|EEE96758.1| predicted protein [Populus trichocarpa]

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 136/228 (59%), Positives = 165/228 (72%), Gaps = 12/228 (5%)

Query: 1   MPIYTSSSESDNEPSRPSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASL 60
           MPIY  SS+SDNE      TTPR +   L G Q+PI  +LGGG+VA VLLW+N  VSA+L
Sbjct: 1   MPIY--SSDSDNE------TTPRTK---LFGRQRPIRSVLGGGQVAGVLLWENKKVSAAL 49

Query: 61  LIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTF 120
             GMT++WFLFEV EYNFVTL  HISIT+ML +FIW   AEFFNW PP IP  IL +STF
Sbjct: 50  SFGMTILWFLFEVAEYNFVTLFSHISITAMLIVFIWCTSAEFFNWNPPAIPRSILDKSTF 109

Query: 121 REVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICI 180
            E A T   RFN+ LS  +D+ACGK P LF + I  LYI SVIG YF+FLN LYL F+C+
Sbjct: 110 HEFALTFHERFNQALSSFVDIACGKQPALFFVAIFCLYILSVIGNYFTFLNFLYLCFVCL 169

Query: 181 LTVPFLYDRYDEHVDYIADREFRRMKKMFRRFNSQFLNKIPRG-PVKE 227
            T+PFLY++Y++ V+  A +  R +KKM+RRF+S  LNKIPRG PVKE
Sbjct: 170 QTLPFLYNKYEDEVERYAGKLTREVKKMYRRFDSNVLNKIPRGVPVKE 217

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439423|ref|XP_004137485.1| PREDICTED: reticulon-like protein B9-like [Cucumis sativus] gi|449518549|ref|XP_004166304.1| PREDICTED: reticulon-like protein B9-like [Cucumis sativus]

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 123/205 (60%), Positives = 160/205 (78%), Gaps = 1/205 (0%)

Query: 24  PRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLC 83
           PR  +L G ++P++DI GGG+VAD+LLWK+   SA LL+GMTV+WFLFE+VEYNFVTL+C
Sbjct: 13  PRS-KLFGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTVLWFLFEIVEYNFVTLIC 71

Query: 84  HISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVAC 143
           H+SITSML  FIW  GAEFF W PP++PE IL+ESTF++VASTL  R N+  +K+ D+A 
Sbjct: 72  HLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVASTLHRRINQFFTKIFDIAY 131

Query: 144 GKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFR 203
           GKD  LF L I  LY+ SVIG+Y SFLNLLY GF+ + T+PFLY++Y+E VD +A     
Sbjct: 132 GKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEEEVDQLAGMAIY 191

Query: 204 RMKKMFRRFNSQFLNKIPRGPVKEN 228
           + KK +R F+++FLNKIPRGPVK+ 
Sbjct: 192 QTKKSYRNFDAKFLNKIPRGPVKDK 216

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133136|ref|XP_002321491.1| predicted protein [Populus trichocarpa] gi|222868487|gb|EEF05618.1| predicted protein [Populus trichocarpa]

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 132/228 (57%), Positives = 165/228 (72%), Gaps = 10/228 (4%)

Query: 1   MPIYTSSSESDNEPSRPSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASL 60
           MPI   SS+S+NE      TTPR +   L G Q+PI  +LGGG+VADVLLW+N  VSA+L
Sbjct: 1   MPI-IYSSDSENE------TTPRTK---LFGRQRPIRSVLGGGQVADVLLWENKKVSAAL 50

Query: 61  LIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTF 120
            +GMTV+W LFEV EYN VTL  HISI +ML +FIW   A+FFNW  P++P  IL +STF
Sbjct: 51  SVGMTVLWLLFEVAEYNLVTLFSHISIATMLIVFIWFTTADFFNWSHPELPTSILDKSTF 110

Query: 121 REVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICI 180
           +E ASTL  R N+ LSK +D+A GK+P LF + I  LYI SVIG YF+FLN LYL F+C+
Sbjct: 111 QEFASTLHGRSNQALSKFMDIARGKEPALFFMAIFFLYILSVIGNYFTFLNFLYLCFVCL 170

Query: 181 LTVPFLYDRYDEHVDYIADREFRRMKKMFRRFNSQFLNKIPRGPVKEN 228
            T+PFLY++Y++ VD  A +  RR KKMF+RF+S  LNKIPRGP KE 
Sbjct: 171 QTLPFLYNKYEDEVDRYAGKLIRRAKKMFKRFDSSVLNKIPRGPAKEK 218

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21592845|gb|AAM64795.1| unknown [Arabidopsis thaliana]

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 119/228 (52%), Positives = 169/228 (74%), Gaps = 6/228 (2%)

Query: 1   MPIYTSSSESDNEPSRPSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASL 60
           MPI+T SS SD+E  R    T +     L   Q+ IH I GGGKVAD+LLW+   ++A+L
Sbjct: 1   MPIFTGSS-SDSEDERTIHKTTK-----LFTRQRSIHSIFGGGKVADILLWREPKIAATL 54

Query: 61  LIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTF 120
           +IG++++WFL EVVEYNF+TL+CH S+TSML  FIWS  ++F NW+ P IPEV+L ES+F
Sbjct: 55  VIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPIIPEVVLDESSF 114

Query: 121 REVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICI 180
           +++A +  VRFN+IL+KLLDVACG+DP LF L    LYI S+IGTYF+F+NLL++GF+ +
Sbjct: 115 KQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFMNLLFIGFVIM 174

Query: 181 LTVPFLYDRYDEHVDYIADREFRRMKKMFRRFNSQFLNKIPRGPVKEN 228
            T+P +Y+ Y++ VD  A +  R+MKK++++ ++  L+KIPRG VK  
Sbjct: 175 QTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTVKNK 222

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18401821|ref|NP_566604.1| reticulon-like protein B9 [Arabidopsis thaliana] gi|75273624|sp|Q9LJQ5.1|RTNLI_ARATH RecName: Full=Reticulon-like protein B9; Short=AtRTNLB9 gi|9279659|dbj|BAB01175.1| seed maturation protein-like [Arabidopsis thaliana] gi|89111912|gb|ABD60728.1| At3g18260 [Arabidopsis thaliana] gi|332642552|gb|AEE76073.1| reticulon-like protein B9 [Arabidopsis thaliana]

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 119/228 (52%), Positives = 169/228 (74%), Gaps = 6/228 (2%)

Query: 1   MPIYTSSSESDNEPSRPSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASL 60
           MPI+T SS SD+E  R    T +     L   Q+ IH I GGGKVAD+LLW+   ++A+L
Sbjct: 1   MPIFTGSS-SDSEDERTIHKTTK-----LFTRQRSIHSIFGGGKVADILLWREPKIAATL 54

Query: 61  LIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTF 120
           +IG++++WFL EVVEYNF+TL+CH S+TSML  FIWS  ++F NW+ P IPEV+L ES+F
Sbjct: 55  VIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSF 114

Query: 121 REVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICI 180
           +++A +  VRFN+IL+KLLDVACG+DP LF L    LYI S+IGTYF+F+NLL++GF+ +
Sbjct: 115 KQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSM 174

Query: 181 LTVPFLYDRYDEHVDYIADREFRRMKKMFRRFNSQFLNKIPRGPVKEN 228
            T+P +Y+ Y++ VD  A +  R+MKK++++ ++  L+KIPRG VK  
Sbjct: 175 QTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTVKNK 222

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520621|ref|XP_003528960.1| PREDICTED: reticulon-like protein B9-like [Glycine max]

 Score =  255 bits (652), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 123/223 (55%), Positives = 164/223 (73%), Gaps = 8/223 (3%)

Query: 4   YTSSSESDNEPSRPSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIG 63
           + +SS+S+NE              +L G +KPIH++LGGGKVAD+LLW++  VS +LL G
Sbjct: 3   HDTSSDSENEIIGAR--------AKLFGHEKPIHEVLGGGKVADMLLWRDRYVSGALLGG 54

Query: 64  MTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREV 123
           MTVIWFLFE+VEYNFV LLCHISIT+ML LFIWS  A+ F WK PQIP ++L+ES F ++
Sbjct: 55  MTVIWFLFEIVEYNFVALLCHISITTMLVLFIWSTVADIFKWKGPQIPNIVLQESFFHDL 114

Query: 124 ASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTV 183
           AS L  RFN++L  LL ++CG D  +F+L I  LYI SVIG+YFSF+NLLY+GF+C+ T+
Sbjct: 115 ASILHKRFNQLLPMLLHISCGIDLPIFLLNIVSLYILSVIGSYFSFVNLLYIGFLCMQTL 174

Query: 184 PFLYDRYDEHVDYIADREFRRMKKMFRRFNSQFLNKIPRGPVK 226
           P +Y+RY+E ++         ++K +RRFN  +LNKIPRGPVK
Sbjct: 175 PIVYERYEEEINNWVSDIIIVIRKNYRRFNKNYLNKIPRGPVK 217

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297834728|ref|XP_002885246.1| reticulon family protein [Arabidopsis lyrata subsp. lyrata] gi|297331086|gb|EFH61505.1| reticulon family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  252 bits (643), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 116/230 (50%), Positives = 169/230 (73%), Gaps = 9/230 (3%)

Query: 1   MPIYTSSSESDNEPSRPSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASL 60
           MPI+T SS+S++E +    T       +L   Q+ IH I GGGKVAD+LLW+    +A+L
Sbjct: 1   MPIFTGSSDSEDERTIHKTT-------KLFTRQRSIHSIFGGGKVADILLWREPKTAATL 53

Query: 61  LIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTF 120
           +IG++++WFL EVV YNF+TL+CH S+TSML  FIWS  ++F NW+ P IPEV+L ES+F
Sbjct: 54  VIGVSLLWFLMEVVGYNFITLICHASMTSMLLFFIWSTASDFLNWERPIIPEVVLDESSF 113

Query: 121 REVASTLRVRFNKILSKLLDVACGKDPGLFILVIAI--LYIFSVIGTYFSFLNLLYLGFI 178
           +++A +  VRFN+IL+KLLD+ACG+DP LF L +    LYI S+IGTYF+F+N L+LGF+
Sbjct: 114 KQLARSFHVRFNQILAKLLDIACGRDPPLFFLTLGTISLYILSIIGTYFNFVNFLFLGFV 173

Query: 179 CILTVPFLYDRYDEHVDYIADREFRRMKKMFRRFNSQFLNKIPRGPVKEN 228
            + T+P +Y+ Y++ VD +A +  R+MKK++++ +S  L+KIPRG VK  
Sbjct: 174 SMHTLPVMYEMYEDDVDRVAGKWMRKMKKLYKKVDSNVLSKIPRGTVKNK 223

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721651|ref|NP_001235425.1| uncharacterized protein LOC100527903 [Glycine max] gi|255633514|gb|ACU17115.1| unknown [Glycine max]

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 121/215 (56%), Positives = 158/215 (73%)

Query: 12  NEPSRPSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLF 71
           N+ S  S         +L G ++PIH++LGGGKVADVLLWK+  VS +LL GMTVIWFLF
Sbjct: 3   NDTSSDSENEIIGSRAKLFGHEEPIHEVLGGGKVADVLLWKDRYVSDALLGGMTVIWFLF 62

Query: 72  EVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRF 131
           E+VEYNFV LLCHISIT+ML LFIWS  A+ F WK PQIP+++L+ES F ++AS L  RF
Sbjct: 63  EIVEYNFVALLCHISITTMLVLFIWSTVADIFKWKGPQIPDIVLKESFFHDLASILHKRF 122

Query: 132 NKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYD 191
           N++L  LL ++CG D  +F+  I  LYI SVIG+YFSF+NLLY+GF+C+ T+P +Y+RY+
Sbjct: 123 NQLLPMLLRISCGIDLPIFLPNIVSLYILSVIGSYFSFVNLLYIGFLCMQTLPIVYERYE 182

Query: 192 EHVDYIADREFRRMKKMFRRFNSQFLNKIPRGPVK 226
           E ++         +KK +RRFN  +LNKIPRGP K
Sbjct: 183 EEINNWVGDVIIVLKKNYRRFNKNYLNKIPRGPGK 217

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388494646|gb|AFK35389.1| unknown [Lotus japonicus]

 Score =  236 bits (602), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 115/220 (52%), Positives = 154/220 (70%), Gaps = 8/220 (3%)

Query: 8   SESDNEPSRPSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVI 67
           S+SD+E S+   T        +L   KPIH+ILGGGKVADVLLW++  VSA+LL+GMT I
Sbjct: 11  SDSDDEISKTQAT--------ILTRDKPIHEILGGGKVADVLLWRDRNVSAALLLGMTAI 62

Query: 68  WFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTL 127
           WFLFEV EYN VTLLCH +ITSMLAL++WS  A+      PQ  E IL+ES F+++   L
Sbjct: 63  WFLFEVAEYNLVTLLCHFAITSMLALYLWSIAADILKRDGPQFLENILQESLFQDLGFIL 122

Query: 128 RVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLY 187
             R N+IL  LL ++ G D   F+L++  LY+ SVIGT+FSF+NLLY+GF+CI T+P  Y
Sbjct: 123 HRRLNQILRLLLHISSGTDLPTFLLIVVSLYVLSVIGTFFSFVNLLYIGFLCIQTLPIAY 182

Query: 188 DRYDEHVDYIADREFRRMKKMFRRFNSQFLNKIPRGPVKE 227
           DR++E ++ +       ++K +RRF   ++NKIPRGPVKE
Sbjct: 183 DRHEEEINNLFGHIIVDLRKKYRRFKKTYVNKIPRGPVKE 222

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388491750|gb|AFK33941.1| unknown [Lotus japonicus]

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 114/219 (52%), Positives = 154/219 (70%), Gaps = 8/219 (3%)

Query: 8   SESDNEPSRPSRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVI 67
           S+SD+E S+   T        +L   KPIH+ILGGGKVADVLLW++  VSA+LL+GMT I
Sbjct: 11  SDSDDEISKTQAT--------ILTRDKPIHEILGGGKVADVLLWRDRNVSAALLLGMTAI 62

Query: 68  WFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTL 127
           WFLFEV EYN VTLLCH +ITSMLAL++WS  A+      PQ  E IL+ES F+++   L
Sbjct: 63  WFLFEVAEYNLVTLLCHFAITSMLALYLWSIAADILKRDGPQFLENILQESLFQDLGFIL 122

Query: 128 RVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLY 187
             R N+IL  LL ++ G D   F+L++  LY+ SVIGT+FSF+NLLY+GF+CI T+P +Y
Sbjct: 123 HRRLNQILRLLLHISSGTDLPTFLLIVVSLYVLSVIGTFFSFVNLLYIGFLCIQTLPIVY 182

Query: 188 DRYDEHVDYIADREFRRMKKMFRRFNSQFLNKIPRGPVK 226
           DR++E ++ +       ++K +RRF   ++NKIPRGPVK
Sbjct: 183 DRHEEEINNLFGHIIVDLRKKYRRFKKTYVNKIPRGPVK 221

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	228
TAIR|locus:2089663	225	AT3G18260 "AT3G18260" [Arabido	0.964	0.977	0.5	6.6e-58
TAIR|locus:2128238	271	BTI2 "VIRB2-interacting protei	0.978	0.822	0.364	1.5e-42
TAIR|locus:2128494	275	BTI1 "VIRB2-interacting protei	0.868	0.72	0.393	1.7e-41
TAIR|locus:2062882	255	AT2G46170 [Arabidopsis thalian	0.969	0.866	0.387	1.8e-39
TAIR|locus:2160447	257	BTI3 "VIRB2-interacting protei	0.973	0.863	0.358	6.1e-39
TAIR|locus:2080315	203	AT3G54120 "AT3G54120" [Arabido	0.728	0.817	0.337	3.2e-26
TAIR|locus:2049077	201	AT2G15280 "AT2G15280" [Arabido	0.714	0.810	0.337	1.4e-25
TAIR|locus:2082772	264	AT3G61560 [Arabidopsis thalian	0.442	0.382	0.441	1e-23
TAIR|locus:1005716554	249	AT3G10915 [Arabidopsis thalian	0.657	0.602	0.324	3.4e-23
TAIR|locus:2090609	218	AT3G19460 "AT3G19460" [Arabido	0.570	0.596	0.328	2.9e-16

TAIR|locus:2089663 AT3G18260 "AT3G18260" [Arabidopsis thaliana (taxid:3702)]

 Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
 Identities = 113/226 (50%), Positives = 157/226 (69%)

Query:     1 MPIYTSSSESDNEXXXXXXXXXXXXXXXLLGSQKPIHDILGGGKVADVLLWKNITVSASL 60
             MPI+T SS SD+E               L   Q+ IH I GGGKVAD+LLW+   ++A+L
Sbjct:     1 MPIFTGSS-SDSEDERTIHKTTK-----LFTRQRSIHSIFGGGKVADILLWREPKIAATL 54

Query:    61 LIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTF 120
             +IG++++WFL EVVEYNF+TL+CH S+TSML  FIWS  ++F NW+ P IPEV+L ES+F
Sbjct:    55 VIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSF 114

Query:   121 REVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICI 180
             +++A +  VRFN+IL+KLLDVACG+DP LF L    LYI S+IGTYF+F+NLL++GF+ +
Sbjct:   115 KQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSM 174

Query:   181 LTVPFLYDRYDEHVDYIADREXXXXXXXXXXXNSQFLNKIPRGPVK 226
              T+P +Y+ Y++ VD  A +            ++  L+KIPRG VK
Sbjct:   175 QTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTVK 220

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2128238 BTI2 "VIRB2-interacting protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 82/225 (36%), Positives = 133/225 (59%)

Query:     5 TSSSESDNEXXXXXXX--XXXXXXXXLLGSQKPIHDILGGGKVADVLLWKNITVSASLLI 62
             +SSS+ +NE                 L G ++P+H +LGGGK AD+ +WK+  +S  +  
Sbjct:    43 SSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFG 102

Query:    63 GMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFRE 122
             G TV W LFE++EY+ +TLLCH+ I ++  LF+WS    F +  PP+IPEV + E    +
Sbjct:   103 GATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQ 162

Query:   123 VASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILT 182
             +AS LR+  N+ +S L ++A G+D   F+  IA L++ S++G  +SFL L Y+  + + T
Sbjct:   163 LASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFT 222

Query:   183 VPFLYDRYDEHVDYIADREXXXXXXXXXXXNSQFLNKIPRGPVKE 227
             VP  YD+Y++ VD   ++            +++  +KIPRGP+K+
Sbjct:   223 VPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPRGPLKD 267

GO:0005634 "nucleus" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0071458 "integral to cytosolic side of endoplasmic reticulum membrane" evidence=IDA

GO:0071782 "endoplasmic reticulum tubular network" evidence=IDA

GO:0071786 "endoplasmic reticulum tubular network organization" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0010286 "heat acclimation" evidence=RCA

TAIR|locus:2128494 BTI1 "VIRB2-interacting protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
 Identities = 78/198 (39%), Positives = 123/198 (62%)

Query:    29 LLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISIT 88
             L G ++P+H +LGGGK AD+ +WKN  +S  +L G T  W +FE++EY+ +TLLCH+ I 
Sbjct:    73 LFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIV 132

Query:    89 SMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPG 148
              +  LF+WS    F N  PP+IPEV + E    ++AS LR+  N+  S L ++A G+D  
Sbjct:   133 VLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLK 192

Query:   149 LFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREXXXXXXX 208
              F++ IA L++ S++G  F+FL L Y+  + + TVP  YD+Y++ VD + ++        
Sbjct:   193 KFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQ 252

Query:   209 XXXXNSQFLNKIPRGPVK 226
                 + + L+KIP GP+K
Sbjct:   253 YAVLDEKVLSKIPLGPLK 270

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0071458 "integral to cytosolic side of endoplasmic reticulum membrane" evidence=IDA

GO:0071782 "endoplasmic reticulum tubular network" evidence=IDA

GO:0071786 "endoplasmic reticulum tubular network organization" evidence=IMP

TAIR|locus:2062882 AT2G46170 [Arabidopsis thaliana (taxid:3702)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 86/222 (38%), Positives = 133/222 (59%)

Query:     5 TSSSESDNEXXXXXXXXXXXXXXXLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGM 64
             +SSSES+ E               + G +KP+H +LGGGK ADV LW++  +S ++L   
Sbjct:    29 SSSSESEYEKPDSPSAVKAKIYR-MFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVA 87

Query:    65 TVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVA 124
             T IW LFE+VEY+ ++LLCHISI ++  LF+WS      N   PQIPE+ + E  F  VA
Sbjct:    88 TAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVA 147

Query:   125 STLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVP 184
             S+LR   N+    L  +A G+D   F++V+  L+I SV+G +F+FL L+Y+ F+ + TVP
Sbjct:   148 SSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVP 207

Query:   185 FLYDRYDEHVDYIADREXXXXXXXXXXXNSQFLNKIPRGPVK 226
              LY+++++ VD +A++            + + L+KIP   +K
Sbjct:   208 MLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLK 249

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0080167 "response to karrikin" evidence=IEP

GO:0006007 "glucose catabolic process" evidence=RCA

TAIR|locus:2160447 BTI3 "VIRB2-interacting protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 81/226 (35%), Positives = 126/226 (55%)

Query:     6 SSSESDNEXXXXXXXXXXXXXXXLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMT 65
             S S+ D +               L G +KP+H +LGGGK AD+ LW+N  VS  +L  +T
Sbjct:    29 SDSDDDKKSTSSSSSSFKSKIYRLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVT 88

Query:    66 VIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVAS 125
               W LFE+ EY+ +  LCH +I ++ ALF+WS    F +   P IPEV + E    ++ S
Sbjct:    89 ASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVS 148

Query:   126 TLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPF 185
              LR+  N+ L+ L ++A GKD   FILVIA L++ S+IG+ ++FL L Y   + + T+P 
Sbjct:   149 GLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPV 208

Query:   186 LYDRYDEHVDYIADREXXXXXXXXXXXNSQFL----NKIPRGPVKE 227
             LY++Y++ VD   ++            + + L    +KIPRG + +
Sbjct:   209 LYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIPRGALNK 254

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0071458 "integral to cytosolic side of endoplasmic reticulum membrane" evidence=IDA

GO:0071782 "endoplasmic reticulum tubular network" evidence=IDA

GO:0071786 "endoplasmic reticulum tubular network organization" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2080315 AT3G54120 "AT3G54120" [Arabidopsis thaliana (taxid:3702)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 56/166 (33%), Positives = 90/166 (54%)

Query:    29 LLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISIT 88
             L    + IH+ILGGG VADV+LW+   VS  ++      W +FE   Y   TL+  + + 
Sbjct:     8 LFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLL 67

Query:    89 SMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPG 148
              +  LF+WSK A   N   P +PE  + E+   E +  LR+  NK+L    D+A  +D  
Sbjct:    68 LLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSE 127

Query:   149 LFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHV 194
             L+  V   L++ S+IG+   F  L +   + ++TVP  Y+RY++++
Sbjct:   128 LYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2049077 AT2G15280 "AT2G15280" [Arabidopsis thaliana (taxid:3702)]

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 55/163 (33%), Positives = 93/163 (57%)

Query:    33 QKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLA 92
             ++ +H  +  G VAD+++WKN      LL   T++WFLFE   Y+F   + +  + S++ 
Sbjct:     2 EESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVI 61

Query:    93 LFIWSKGAEFFNWKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFIL 152
             LF+W+K A  FN   PQ+P + + E     VA  +RV  N +L+   ++  G++      
Sbjct:    62 LFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFR 121

Query:   153 VIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVD 195
             V  +L+  S +G + +FL +LYLG +  L +PFLY+RY + +D
Sbjct:   122 VSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLID 164

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2082772 AT3G61560 [Arabidopsis thaliana (taxid:3702)]

 Score = 215 (80.7 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
 Identities = 45/102 (44%), Positives = 62/102 (60%)

Query:     4 YTSSSESDNEXXXXXX-XXXXXXXXXLLGSQKPIHDILGGGKVADVLLWKNITVSASLLI 62
             + SSS SD+E                L G +KP+H +LGGG  ADV LW++  +SAS+L 
Sbjct:    26 HDSSSSSDSEHEKPESPSALKAKIYRLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLG 85

Query:    63 GMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFN 104
               T IW LFE+VEY+F++L+CHI I ++ ALF+ S    F N
Sbjct:    86 VATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMN 127

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:1005716554 AT3G10915 [Arabidopsis thaliana (taxid:3702)]

 Score = 232 (86.7 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
 Identities = 49/151 (32%), Positives = 83/151 (54%)

Query:    46 ADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNW 105
             AD+LLW+   +S  ++I  TV W +FE     F+++   + +  ++  F+ ++ + F N 
Sbjct:    64 ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 123

Query:   106 KPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIAI-LYIFSVIG 164
             +   +PE++L E      A++ R++ N +L    DV  G D  LF   + I L++ S IG
Sbjct:   124 QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIG 183

Query:   165 TYFSFLNLLYLGFICILTVPFLYDRYDEHVD 195
             +Y S   LLY+G I  +T+P LY +Y   VD
Sbjct:   184 SYISLCTLLYIGTILSVTIPALYSKYQSKVD 214

GO:0005634 "nucleus" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2090609 AT3G19460 "AT3G19460" [Arabidopsis thaliana (taxid:3702)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 43/131 (32%), Positives = 72/131 (54%)

Query:    45 VADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFN 104
             VAD+LLW+N T +  LLI  T  WFLFE   YN ++ + ++ +  +   F+W+K A   N
Sbjct:     6 VADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLN 65

Query:   105 WKPPQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIG 164
                P +P + + E    + A  LRV  N +LS   D+   ++P + +L +   +++  I 
Sbjct:    66 RPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNP-IRLLQVFFHHLWQTIC 124

Query:   165 TYFSFLNLLYL 175
               F FL+++YL
Sbjct:   125 CIFLFLHVMYL 135

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LJQ5	RTNLI_ARATH	No assigned EC number	0.5219	0.9736	0.9866	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	228
pfam02453	164	pfam02453, Reticulon, Reticulon	3e-46

>gnl|CDD|217046 pfam02453, Reticulon, Reticulon

 Score =  150 bits (381), Expect = 3e-46
 Identities = 53/152 (34%), Positives = 85/152 (55%), Gaps = 1/152 (0%)

Query: 45  VADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFN 104
           VAD+LLW++   S  +   + VIW LF +  Y+ +++L ++ +  +   F+W    +  N
Sbjct: 1   VADLLLWRDPKKSGVVFGSLLVIWLLFSLSGYSLLSVLSYLLLLLLAVTFLWRLAKKLLN 60

Query: 105 WKP-PQIPEVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVI 163
             P P  P+V L E T  E+A +LRV  NK L +L  +  G+D    +     L++ S +
Sbjct: 61  AVPEPLDPDVTLSEETVEEIADSLRVLINKALKELRRLFLGEDLVDSLKAAVGLWLLSYL 120

Query: 164 GTYFSFLNLLYLGFICILTVPFLYDRYDEHVD 195
           G+ FS L LLY+G I   TVP LY++Y + +D
Sbjct: 121 GSLFSGLTLLYIGVILAFTVPLLYEKYQDEID 152

Reticulon, also know as neuroendocrine-specific protein (NSP), is a protein of unknown function which associates with the endoplasmic reticulum. This family represents the C-terminal domain of the three reticulon isoforms and their homologues. Length = 164

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	228
KOG1792	230	consensus Reticulon [Intracellular trafficking, se	100.0
PF02453	169	Reticulon: Reticulon; InterPro: IPR003388 Eukaryot	100.0
PF04842	683	DUF639: Plant protein of unknown function (DUF639)	97.23
KOG1792	230	consensus Reticulon [Intracellular trafficking, se	94.45
PF06398	359	Pex24p: Integral peroxisomal membrane peroxin; Int	93.56
PF08372	156	PRT_C: Plant phosphoribosyltransferase C-terminal;	92.59
PF08372	156	PRT_C: Plant phosphoribosyltransferase C-terminal;	87.1

>KOG1792 consensus Reticulon [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.5e-50  Score=347.36  Aligned_cols=217  Identities=41%  Similarity=0.788  Sum_probs=207.0

Q ss_pred             CCCCCCC-CCCCCCCCCCCCCCCCCccccccCCCcccceecccccchhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Q 027121           11 DNEPSRP-SRTTPRPRPPRLLGSQKPIHDILGGGKVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITS   89 (228)
Q Consensus        11 ~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~lg~~~v~dlLlWrn~~~Sg~vf~~~~~~~~L~~~~~~sliSvvs~~~ll~   89 (228)
                      |+++++. .++ ..++.+|+|+||.++|+.+|||+++|+++|||++.||.+|++.+++|++|...+|+.++++|+++++.
T Consensus         9 ~~~~~~~~~~s-~~~~~~rlf~~~~~v~~~lg~~~vaDlllWrdkk~s~~vl~~~~~~w~lf~~~~~~~vt~~~~i~ll~   87 (230)
T KOG1792|consen    9 NSESEKLKFTS-AIEKSSRLFGREGPVHKVLGGGKVADLLLWRDKKKSGTVLGVATALWLLFEFFSYNSVTLLCHILLLA   87 (230)
T ss_pred             ccccccccccc-ccchhccccCCCccccccCCCCchhheeeeeccccceeehHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            8887884 455 88889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhCC-CCC--CCC-ceeeCHHHHHHHHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHHHHHHHHHH
Q 027121           90 MLALFIWSKGAEFFNW-KPP--QIP-EVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGT  165 (228)
Q Consensus        90 l~~~fl~~~l~~~~~k-~~~--~~p-~~~isee~v~~~~~~v~~~in~~l~~lr~l~~~~d~~~slkv~~~L~~ls~lGs  165 (228)
                      +.+.|.|.+...+++| +.|  ..| ++++|||.+++.++.++.++|+.+.++|++++++|+.+++|+++.||+++++|+
T Consensus        88 ~~i~F~w~~~~~~~~k~~~~~~~lp~~i~ipee~~~~~a~~~~~~in~~l~~l~~ia~~~d~~~~lk~~v~lw~lS~vGs  167 (230)
T KOG1792|consen   88 LAILFLWSKAVTFLNKKSEPGAYLPVEITIPEEFVLALASSLRVEINQALSELRDIALGRDLKDFLKVAVGLWILSYVGS  167 (230)
T ss_pred             HHHHHHHHHHHHHHhcCCCccccCCceeecCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence            9999999998777777 555  577 999999999999999999999999999999999999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 027121          166 YFSFLNLLYLGFICILTVPFLYDRYDEHVDYIADREFRRMKKMFRRFNSQFLNKIPRGPVKEN  228 (228)
Q Consensus       166 ~~s~~tLl~i~~v~~FTvP~lYe~~q~~ID~~v~~~~~~i~~~~~~~~~kv~~kip~~~~~~~  228 (228)
                      |||++|++|+|++++||+|.+||+|||+||++++++.++.+++|+++++|+.+|||+++.+++
T Consensus       168 ~fn~lTll~ig~v~~~TvP~~YEky~d~ID~~~~~~~~~~k~~~~~~~~k~l~kip~~~~~~~  230 (230)
T KOG1792|consen  168 LFNFLTLLYIGLVLLFTVPVLYEKYEDQIDPYLGKVMEELKKHYRKFDEKVLSKIPAGPRKKE  230 (230)
T ss_pred             hhhHHHHHHHHHHHHhcccchhHHhHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCC
Confidence            999999999999999999999999999999999999999999999999999999999987764

>PF02453 Reticulon: Reticulon; InterPro: IPR003388 Eukaryotic proteins of the reticulon (RTN) family all share an association with the endoplasmic reticulum (ER)

Probab=100.00  E-value=2.2e-37  Score=252.95  Aligned_cols=163  Identities=31%  Similarity=0.591  Sum_probs=46.5

Q ss_pred             ccceecccccchhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHHhhhCCCC------CCCCceeeCHH
Q 027121           45 VADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKP------PQIPEVILRES  118 (228)
Q Consensus        45 v~dlLlWrn~~~Sg~vf~~~~~~~~L~~~~~~sliSvvs~~~ll~l~~~fl~~~l~~~~~k~~------~~~p~~~isee  118 (228)
                      |+|+|+||||++||.+|++++++|++++++++|++|++|+++++.+++.+++....+.+++.+      ++.++.+++||
T Consensus         1 V~dll~W~~~~~S~~v~~~~~~~~~l~~~~~~s~is~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (169)
T PF02453_consen    1 VADLLLWRDPKKSGIVFGAILLFWLLFWLFNYSLISLVSYILLLLLAISFLYRLLSKVLSRSPKGPFKEPLDYDLEISEE   80 (169)
T ss_dssp             ----------------------------------------------------THCCCTCCHHHHCTTHHHHCHHHHHCCH
T ss_pred             CceeeEecCCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccCCccccccccHH
Confidence            689999999999999999999999999999999999999999999999888877766666543      22347899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhchhHHHHHH
Q 027121          119 TFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEHVDYIA  198 (228)
Q Consensus       119 ~v~~~~~~v~~~in~~l~~lr~l~~~~d~~~slkv~~~L~~ls~lGs~~s~~tLl~i~~v~~FTvP~lYe~~q~~ID~~v  198 (228)
                      .++++++.+.+.+|..++.+|+++.++|+..++++++++|+++++|+++|++||++++++++||+|++||+||++||+++
T Consensus        81 ~~~~~~~~~~~~~n~~~~~~~~l~~~~~~~~~l~~~~~l~~l~~lg~~~s~~~L~~l~~~~~f~~P~ly~~~~~~Id~~~  160 (169)
T PF02453_consen   81 RVERLADSVAEWINSVLSWLRRLVFGEDPKKSLKVFVVLYILSFLGSWFSFLTLLYLGVLGAFTVPKLYEKYQEEIDQYV  160 (169)
T ss_dssp             HHHHHHHHCCCCCCHHHHHHHCCCHCT-TTGGG-----------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHH
Q 027121          199 DREFRRMKK  207 (228)
Q Consensus       199 ~~~~~~i~~  207 (228)
                      ++++++++|
T Consensus       161 ~~~~~~~~k  169 (169)
T PF02453_consen  161 AKVKEKVKK  169 (169)
T ss_dssp             ---------
T ss_pred             HHHHHHhcC
Confidence            998888764

Whereas amino-terminal regions are not related to one another, all reticulon proteins share a 200 amino acid residue region of sequence similarity at the C-terminal. This region contains two large hydrophobic regions separated by a 66 residue hydrophilic segment. The conserved hydrophobic C-terminal portion has been shown to play an essential role in the association of reticulons with the ER membrane. The hydrophobic portions are supposed to be membrane-embedded and the hydrophilic 66 residue localized to the lumenal/extracellular face of the membrane. Most reticulons have a di-lysine ER retention motif at the C-terminal. Because of their likely association with the rough as well as the smooth ER, the reticulons might play some role in transport processes or in regulation of intracellular calcium levels. It has been suggested that the reticulons may be serving as ER-associated channel-like complexes [, , , ].; GO: 0005783 endoplasmic reticulum; PDB: 2KO2_A 2JV5_A 2G31_A.

>PF04842 DUF639: Plant protein of unknown function (DUF639); InterPro: IPR006927 The sequences in this family are plant proteins of unknown function

Probab=97.23  E-value=0.0069  Score=59.53  Aligned_cols=161  Identities=17%  Similarity=0.179  Sum_probs=101.8

Q ss_pred             cccceecccccchhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHHhhhCCC--------CCCCC--ce
Q 027121           44 KVADVLLWKNITVSASLLIGMTVIWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWK--------PPQIP--EV  113 (228)
Q Consensus        44 ~v~dlLlWrn~~~Sg~vf~~~~~~~~L~~~~~~sliSvvs~~~ll~l~~~fl~~~l~~~~~k~--------~~~~p--~~  113 (228)
                      .+.+|..|+||.+|...++..+.+.+-=|      +.-+.-.+++.+++..+|....+..++.        +|+-.  +-
T Consensus       505 ~~~~l~~We~P~kt~~Fl~~~~~iI~r~w------l~Y~~p~~Ll~~a~~Ml~~r~~~~~g~~~~~v~V~~pP~~nTvEq  578 (683)
T PF04842_consen  505 WLQKLASWEEPLKTLVFLALFLYIIYRGW------LGYIFPAFLLFSAVFMLWLRYQGRLGKSFGEVTVRDPPPKNTVEQ  578 (683)
T ss_pred             HHHHHhhccCcchhHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHhhhccCCccceEEecCCCCccHHHH
Confidence            56689999999999998877766322211      2211122222222223443322222232        11111  11


Q ss_pred             eeCHHHHHHHHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhchhH
Q 027121          114 ILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRYDEH  193 (228)
Q Consensus       114 ~isee~v~~~~~~v~~~in~~l~~lr~l~~~~d~~~slkv~~~L~~ls~lGs~~s~~tLl~i~~v~~FTvP~lYe~~q~~  193 (228)
                      .+.-..+..-++......|-++-++|.|++...+..+-++++.|..++.+-..+-+--++.+.++-.||-..=+.+    
T Consensus       579 ilalQ~Ais~~E~~iQ~~NI~LLKiRsllls~~PqaT~~Va~~Ll~~A~~LavvP~kyil~~v~l~~FTre~~~Rr----  654 (683)
T PF04842_consen  579 ILALQEAISQLEEYIQAANIVLLKIRSLLLSKFPQATNKVALALLGLAAVLAVVPFKYILLFVFLEVFTRESPFRR----  654 (683)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCch----
Confidence            1222234444577788889999999999999999999999999999999999999999999999988886432221    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 027121          194 VDYIADREFRRMKKMFRRFNSQFLNKIPRGP  224 (228)
Q Consensus       194 ID~~v~~~~~~i~~~~~~~~~kv~~kip~~~  224 (228)
                        .-.++..+++++.|        ..||-+|
T Consensus       655 --~s~er~~RRlrEWW--------~sIPAaP  675 (683)
T PF04842_consen  655 --ESSERFNRRLREWW--------DSIPAAP  675 (683)
T ss_pred             --hhHHHHHHHHHHHH--------hhCCccc
Confidence              12345566677777        4566654

>KOG1792 consensus Reticulon [Intracellular trafficking, secretion, and vesicular transport]

Probab=94.45  E-value=0.19  Score=43.70  Aligned_cols=79  Identities=16%  Similarity=0.193  Sum_probs=65.0

Q ss_pred             HHhhhhccCChhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhc-----------------------hhH
Q 027121          137 KLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRY-----------------------DEH  193 (228)
Q Consensus       137 ~lr~l~~~~d~~~slkv~~~L~~ls~lGs~~s~~tLl~i~~v~~FTvP~lYe~~-----------------------q~~  193 (228)
                      ...++++|||.+.++.+.++..++..+-..++..++..+..+.+++++.++.++                       |+.
T Consensus        42 ~vaDlllWrdkk~s~~vl~~~~~~w~lf~~~~~~~vt~~~~i~ll~~~i~F~w~~~~~~~~k~~~~~~~lp~~i~ipee~  121 (230)
T KOG1792|consen   42 KVADLLLWRDKKKSGTVLGVATALWLLFEFFSYNSVTLLCHILLLALAILFLWSKAVTFLNKKSEPGAYLPVEITIPEEF  121 (230)
T ss_pred             chhheeeeeccccceeehHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCceeecCHHH
Confidence            577999999999999999988888888888888888888888888777766555                       567


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Q 027121          194 VDYIADREFRRMKKMFRRFNSQ  215 (228)
Q Consensus       194 ID~~v~~~~~~i~~~~~~~~~k  215 (228)
                      ++++...++.++|...+++++-
T Consensus       122 ~~~~a~~~~~~in~~l~~l~~i  143 (230)
T KOG1792|consen  122 VLALASSLRVEINQALSELRDI  143 (230)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            7788888888888888877754

>PF06398 Pex24p: Integral peroxisomal membrane peroxin; InterPro: IPR010482 Peroxisomes play diverse roles in the cell, compartmentalising many activities related to lipid metabolism and functioning in the decomposition of toxic hydrogen peroxide

Probab=93.56  E-value=1.1  Score=40.96  Aligned_cols=23  Identities=30%  Similarity=0.495  Sum_probs=17.8

Q ss_pred             cccceecccccchhHHHHHHHHH
Q 027121           44 KVADVLLWKNITVSASLLIGMTV   66 (228)
Q Consensus        44 ~v~dlLlWrn~~~Sg~vf~~~~~   66 (228)
                      .+.++++|+||..+-.++.+.+.
T Consensus        31 ~vl~il~W~~p~~t~~~L~l~t~   53 (359)
T PF06398_consen   31 RVLRILTWTNPDYTLSFLLLYTF   53 (359)
T ss_pred             HHHHeEEeCCCCcchHHHHHHHH
Confidence            57789999999987777655554

Sequence similarity was identified between two hypothetical proteins and the peroxin integral membrane protein Pex24p [].

>PF08372 PRT_C: Plant phosphoribosyltransferase C-terminal; InterPro: IPR013583 This domain is found at the C terminus of phosphoribosyltransferases and phosphoribosyltransferase-like proteins

Probab=92.59  E-value=0.99  Score=36.98  Aligned_cols=66  Identities=14%  Similarity=0.134  Sum_probs=51.6

Q ss_pred             HHHHHHHHHHHHHHhhhhccCChhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhc
Q 027121          125 STLRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFLYDRY  190 (228)
Q Consensus       125 ~~v~~~in~~l~~lr~l~~~~d~~~slkv~~~L~~ls~lGs~~s~~tLl~i~~v~~FTvP~lYe~~  190 (228)
                      +.+...+....+.++.++.++|+..|..+.+++++.+.+-....+..++.+..+..|+=|++-...
T Consensus        72 Q~vlgd~At~gERl~allsWrdP~aT~lf~~~clv~avvly~vP~r~l~l~~gly~~r~P~~R~~~  137 (156)
T PF08372_consen   72 QNVLGDVATQGERLQALLSWRDPRATALFVVFCLVAAVVLYFVPFRVLVLIWGLYKLRHPRFRNPL  137 (156)
T ss_pred             HHHHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCccccCCC
Confidence            334444555667899999999999999999999888888888788777777777777877776643

It contains putative transmembrane regions. It often appears together with calcium-ion dependent C2 domains (IPR000008 from INTERPRO).

>PF08372 PRT_C: Plant phosphoribosyltransferase C-terminal; InterPro: IPR013583 This domain is found at the C terminus of phosphoribosyltransferases and phosphoribosyltransferase-like proteins

Probab=87.10  E-value=0.52  Score=38.60  Aligned_cols=29  Identities=17%  Similarity=0.370  Sum_probs=23.4

Q ss_pred             CCcccceecccccchhHHHHHHHHHHHHH
Q 027121           42 GGKVADVLLWKNITVSASLLIGMTVIWFL   70 (228)
Q Consensus        42 ~~~v~dlLlWrn~~~Sg~vf~~~~~~~~L   70 (228)
                      |+++..++.||||..|++..++.+++.+.
T Consensus        82 gERl~allsWrdP~aT~lf~~~clv~avv  110 (156)
T PF08372_consen   82 GERLQALLSWRDPRATALFVVFCLVAAVV  110 (156)
T ss_pred             HHHHHHhhccCCccHHHHHHHHHHHHHHH
Confidence            46899999999999999988877664333

It contains putative transmembrane regions. It often appears together with calcium-ion dependent C2 domains (IPR000008 from INTERPRO).

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	228
2ko2_A	79	Reticulon-4; NOGO, membrane protein, peripheral, D	98.44
2g31_A	60	Reticulon-4; NOGO, helix, signaling protein; NMR {	97.79

>2ko2_A Reticulon-4; NOGO, membrane protein, peripheral, DPC micelle, myelin INHI endoplasmic reticulum, membrane, phosphoprotein, transmembr; NMR {Mus musculus}

Probab=98.44  E-value=3e-08  Score=70.89  Aligned_cols=58  Identities=14%  Similarity=0.068  Sum_probs=54.8

Q ss_pred             HHHHHHhhhCCCCCCCC-------ceeeCHHHHHHHHHHHHHHHHHHHHHHhhhhccCChhHHHH
Q 027121           95 IWSKGAEFFNWKPPQIP-------EVILRESTFREVASTLRVRFNKILSKLLDVACGKDPGLFIL  152 (228)
Q Consensus        95 l~~~l~~~~~k~~~~~p-------~~~isee~v~~~~~~v~~~in~~l~~lr~l~~~~d~~~slk  152 (228)
                      +|+.+.+.++|+...+|       |+.+|+|.+++.++.+...+|.+++++|+|++++|+.+|+|
T Consensus        15 iYk~vlqavqKtd~~hPFk~YLd~Di~ls~E~~~~~~~~~v~~in~~l~~LRrLfLVedlvDSLK   79 (79)
T 2ko2_A           15 IYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLK   79 (79)
T ss_dssp             HHHHTHHHHHCTTTTCCSHHHHHHHHHHTTCHHHHHHHCTTTHHHHHHHHHHHHHHHTCTTGGGC
T ss_pred             HHHHHHHHHHhCCCCCCccccccccccCCHHHHHHHHHHHHHHHHHHHHHHhHHhhcccHHHhcC
Confidence            89999999999988888       88999999999999999999999999999999999999875

>2g31_A Reticulon-4; NOGO, helix, signaling protein; NMR {Homo sapiens} PDB: 2jv5_A

Probab=97.79  E-value=3.3e-07  Score=62.32  Aligned_cols=51  Identities=14%  Similarity=0.109  Sum_probs=43.9

Q ss_pred             HHHHHhhhCCCCCCCC-------ceeeCHHHHHHHHHHHHHHHHHHHHHHhhhhccCC
Q 027121           96 WSKGAEFFNWKPPQIP-------EVILRESTFREVASTLRVRFNKILSKLLDVACGKD  146 (228)
Q Consensus        96 ~~~l~~~~~k~~~~~p-------~~~isee~v~~~~~~v~~~in~~l~~lr~l~~~~d  146 (228)
                      |+.+.+.++|+...+|       |+.+|+|.+++.++.+..++|.+++++|+|++++|
T Consensus         3 Yk~vlqavqKt~~~hPFk~yLd~di~ls~e~~~~~~~~~v~~in~~l~~lrrLfLVed   60 (60)
T 2g31_A            3 YKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDD   60 (60)
T ss_dssp             CCTTTTHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHGGGTCHHHHHHHHTSSCTTC
T ss_pred             HHHHHHHHHhCCCCCCchhccccCcCCCHHHHHHHHHHHHHHHHHHHHHHhHhhccCC
Confidence            3455566677665566       88999999999999999999999999999999987

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00