Citrus Sinensis ID: 027126

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
Protein Sequence
MVEPSPPSPSLQIPNHMVPPPLDPQPQPSPSPPQPQQQRTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGICTAQYEEEDLKLRYCYKLLVQF
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccEEEEEEHHHHccccccEEEEEEEcccccccccEEEEEEEcEEEEEEcccccEEEEEEccccccEEEEEEccccccccEEEEEEEccccccEEEEEccccccccccEEEEEcccEEEcHHHHHHHHccEEEEEcEEccEEEccEEEEEEccccccEEEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccccEEccccccEEEEEEEccccHEEEEEEEEHHHccccEEEEEEcccccccccccEEEEEEEEEEEEEEHHHccEEEEEcccccccEEEEEcccHHHcccEEEEEEEccccccEEEEcccccccccccEEEEccccEEEEEEEEcccccEEEEEEEEEEcccccEEEEEEEccccccEEEEEEEEEEc
Coil and Loop (DISEMBL)
mvepsppspslqipnhmvpppldpqpqpspsppqpqqqrtsslfsfpsrpalrvtsefdsdssiFLHKISCKLFDSLAKLKVSfqndnkgqifepqlaFTSKHLSLHYdleeqnafvkssfdvgpklhfrAAHDvkaqqgevgvvanlgdpgyalelsspvpyvgypkatfkfplgevslvereEEEVKKTLSISGIAKGQILNGICTAQYEEEDLKLRYCYKLLVQF
Flexible Loop (DISEMBL)
mvepsppspslqipnHMVPPPLDPQPQPSPSPPQPQQQRTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGEVSLVEREEEEVKKtlsisgiakgqilNGICTAQYEEEDLKLRYCYKLLVQF
Low Complexity Region (SEG)
MVEPSPPSPSLQIPNHMVpppldpqpqpspsppqpqqqRTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGevslvereeeevKKTLSISGIAKGQILNGICTAQYEEEDLKLRYCYKLLVQF
Disordered region (IsUnstruct)
*************************************************************SSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGEV***************ISGIAKGQILNGICTAQYEEEDLKLRYCYKLLV**
Disordered Region (DISOPRED)
*********************************************FPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKV***********EPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGEVS***********TLSISGIAKGQILNGICTAQYEEEDLKLRYCYKLLVQF
Disordered Region (DISEMBL)
**********LQIPNHMVPPPL********************LFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGEVSLVE**********SISGIAKGQILNGICTAQYEEEDLKLRYCYKLLVQF
Disordered Region (DISPRO)
**************************************RTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGICTAQYEEEDLKLRYCYKLLVQF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVEPSPPSPSLQIPNHMVPPPLDPQPQPSPSPPQPQQQRTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGICTAQYEEEDLKLRYCYKLLVQF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	228	2.2.26 [Sep-21-2011]
Q4LDF9	329	Outer envelope pore prote	N/A	no	0.890	0.617	0.607	4e-70
O80565	343	Outer envelope pore prote	yes	no	0.973	0.647	0.563	6e-63

>sp|Q4LDF9|OEP37_PEA Outer envelope pore protein 37, chloroplastic OS=Pisum sativum GN=OEP37 PE=1 SV=1

 Score =  264 bits (675), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 130/214 (60%), Positives = 165/214 (77%), Gaps = 11/214 (5%)

Query: 14  PNHMVPPPLDPQPQPSPSPPQPQQQRTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKL 73
           PN+   P +DPQP PS +P       +  +FSFP RPALR+T+EFDS+S++F HKISCK 
Sbjct: 8   PNY--SPEVDPQPLPSTNPIH-----SRPIFSFPKRPALRITTEFDSESTVFFHKISCKF 60

Query: 74  FDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAH 133
            DSLAKLK +F N++KG+I EPQ++F SK+LSLHYDLE+ +A VKSS DVGPKL     H
Sbjct: 61  LDSLAKLKFAFHNNSKGEIAEPQISFVSKYLSLHYDLEDHSALVKSSVDVGPKLKLIGTH 120

Query: 134 DVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGEVSLVE----REEEEVK 189
           DVKAQQGEV +VANL DPGYAL+LS+P+P +  PKATFKFP GE+SL E     E+E+VK
Sbjct: 121 DVKAQQGEVTMVANLDDPGYALQLSTPLPSIALPKATFKFPQGEISLQEINDHDEDEQVK 180

Query: 190 KTLSISGIAKGQILNGICTAQYEEEDLKLRYCYK 223
            +LS+SG  KGQ+L G+CTAQY++++ KLRY YK
Sbjct: 181 NSLSVSGTLKGQLLKGLCTAQYKDQEFKLRYRYK 214

Voltage-dependent peptide-sensitive high conductance rectifying cation channel with a strong affinity for TIC32 that is imported into the chloroplast. Conductance is pH-dependent decreasing with decreasing pH values.
Pisum sativum (taxid: 3888)

>sp|O80565|OEP37_ARATH Outer envelope pore protein 37, chloroplastic OS=Arabidopsis thaliana GN=OEP37 PE=1 SV=2

 Score =  240 bits (612), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 129/229 (56%), Positives = 170/229 (74%), Gaps = 7/229 (3%)

Query: 1   MVEPSPPSPSLQIPNHMVPPPLDPQPQPSPSPPQPQQQRTSSLFSF---PSRPALRVTSE 57
           M +PS  +P+L  P     P    Q Q   S   P  +   S  SF    +RP LRVTSE
Sbjct: 1   MADPSSQNPNLATPPPPSSPSPTHQIQSGTSELSPPSRPPCSTLSFLKTANRPKLRVTSE 60

Query: 58  FDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFV 117
           FDSDS +FL+K+SCKLFD+LAKLK+SFQN+++ +I +PQ++FTSKH+S+ YD+EE+N F+
Sbjct: 61  FDSDSLLFLNKVSCKLFDNLAKLKLSFQNNSQREISQPQVSFTSKHVSVLYDVEEKNTFI 120

Query: 118 KSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGE 177
           KS+ DV P+L  RA H+VKAQQGEV + ANL +PGY+LELSSPVP +GYP+AT KFPLGE
Sbjct: 121 KSTLDVHPRLQLRALHNVKAQQGEVAMEANLTEPGYSLELSSPVP-IGYPRATLKFPLGE 179

Query: 178 VSL---VEREEEEVKKTLSISGIAKGQILNGICTAQYEEEDLKLRYCYK 223
           +SL    E EEE+ K+TLS++GI K Q++NG+CTA Y +E+L+LRY YK
Sbjct: 180 ISLQEKDEEEEEKQKRTLSVNGILKRQVMNGVCTALYTDEELRLRYAYK 228

Voltage-dependent peptide-sensitive high conductance rectifying cation channel with a strong affinity for TIC32 that is imported into the chloroplast. Conductance is pH-dependent decreasing with decreasing pH values.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	228
224140693	270	predicted protein [Populus trichocarpa]	0.864	0.729	0.682	2e-73
224095364	318	predicted protein [Populus trichocarpa]	0.767	0.550	0.737	7e-72
118485779	334	unknown [Populus trichocarpa]	0.767	0.523	0.737	8e-72
122220797	329	RecName: Full=Outer envelope pore protei	0.890	0.617	0.607	2e-68
449444675	333	PREDICTED: outer envelope pore protein 3	0.793	0.543	0.690	1e-67
359478237	328	PREDICTED: uncharacterized protein LOC10	0.820	0.570	0.682	2e-67
296084367	325	unnamed protein product [Vitis vinifera]	0.820	0.575	0.682	3e-67
449489770	369	PREDICTED: outer envelope pore protein 3	0.793	0.490	0.690	3e-67
255645606	319	unknown [Glycine max]	0.850	0.608	0.622	1e-65
356562587	319	PREDICTED: uncharacterized protein LOC10	0.798	0.570	0.650	2e-65

>gi|224140693|ref|XP_002323713.1| predicted protein [Populus trichocarpa] gi|222866715|gb|EEF03846.1| predicted protein [Populus trichocarpa]

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 142/208 (68%), Positives = 164/208 (78%), Gaps = 11/208 (5%)

Query: 17  MVPP-PLDPQPQPSPSPPQPQQQRTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKLFD 75
           MVPP P    PQ   SP         SL S   RP LRVTSEFDSD+S+F HK+SCKL D
Sbjct: 1   MVPPIPHTDAPQSPASPI--------SLLS--KRPKLRVTSEFDSDTSLFFHKVSCKLLD 50

Query: 76  SLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDV 135
           S AKLK+SFQN+NKG+  +PQ A TSK LS+HYDLEEQNA VK+SFD+GPK HF+AAHDV
Sbjct: 51  SFAKLKLSFQNNNKGEPSQPQFALTSKLLSIHYDLEEQNALVKTSFDLGPKFHFKAAHDV 110

Query: 136 KAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGEVSLVEREEEEVKKTLSIS 195
           KAQQGEV +VA+LGDPGYALE+SSPVP VG P+AT KFP GEVSL E+EEEE ++TLS+S
Sbjct: 111 KAQQGEVAMVADLGDPGYALEISSPVPTVGAPRATLKFPHGEVSLGEKEEEEARRTLSVS 170

Query: 196 GIAKGQILNGICTAQYEEEDLKLRYCYK 223
           GI K Q+ NGI TAQ+ +EDLKLRYCYK
Sbjct: 171 GIVKSQLTNGIFTAQFNDEDLKLRYCYK 198

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224095364|ref|XP_002310382.1| predicted protein [Populus trichocarpa] gi|222853285|gb|EEE90832.1| predicted protein [Populus trichocarpa]

 Score =  276 bits (705), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 129/175 (73%), Positives = 155/175 (88%)

Query: 49  RPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHY 108
           RP LRVTSEFDSDSS+F HK+SCKL DS AK K+SFQN+NKG++ +PQ AFTSK LS+HY
Sbjct: 29  RPKLRVTSEFDSDSSLFFHKVSCKLLDSFAKFKLSFQNNNKGELSQPQFAFTSKLLSIHY 88

Query: 109 DLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPK 168
           DLEE NA VK SFD+GP LHF+AAHDVKAQQGEV +VA+LGDPGYALE+SSPVP VG P+
Sbjct: 89  DLEEHNALVKGSFDLGPNLHFKAAHDVKAQQGEVAMVADLGDPGYALEISSPVPTVGVPR 148

Query: 169 ATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGICTAQYEEEDLKLRYCYK 223
           AT KFPLGEVSL E+EEEE+++TLS+SG+ K Q++NG+CTAQ+ +EDLKL+YCYK
Sbjct: 149 ATLKFPLGEVSLEEKEEEELRRTLSVSGVVKSQLMNGLCTAQFSDEDLKLKYCYK 203

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118485779|gb|ABK94738.1| unknown [Populus trichocarpa]

 Score =  275 bits (704), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 129/175 (73%), Positives = 155/175 (88%)

Query: 49  RPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHY 108
           RP LRVTSEFDSDSS+F HK+SCKL DS AK K+SFQN+NKG++ +PQ AFTSK LS+HY
Sbjct: 45  RPKLRVTSEFDSDSSLFFHKVSCKLLDSFAKFKLSFQNNNKGELSQPQFAFTSKLLSIHY 104

Query: 109 DLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPK 168
           DLEE NA VK SFD+GP LHF+AAHDVKAQQGEV +VA+LGDPGYALE+SSPVP VG P+
Sbjct: 105 DLEEHNALVKGSFDLGPNLHFKAAHDVKAQQGEVAMVADLGDPGYALEISSPVPTVGVPR 164

Query: 169 ATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGICTAQYEEEDLKLRYCYK 223
           AT KFPLGEVSL E+EEEE+++TLS+SG+ K Q++NG+CTAQ+ +EDLKL+YCYK
Sbjct: 165 ATLKFPLGEVSLEEKEEEELRRTLSVSGVVKSQLMNGLCTAQFSDEDLKLKYCYK 219

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|122220797|sp|Q4LDF9.1|OEP37_PEA RecName: Full=Outer envelope pore protein 37, chloroplastic; AltName: Full=Chloroplastic outer envelope pore protein of 37 kDa; Short=PsOEP37; Flags: Precursor gi|5531418|emb|CAB50915.1| outer envelope protein [Pisum sativum]

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 130/214 (60%), Positives = 165/214 (77%), Gaps = 11/214 (5%)

Query: 14  PNHMVPPPLDPQPQPSPSPPQPQQQRTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKL 73
           PN+   P +DPQP PS +P       +  +FSFP RPALR+T+EFDS+S++F HKISCK 
Sbjct: 8   PNY--SPEVDPQPLPSTNPIH-----SRPIFSFPKRPALRITTEFDSESTVFFHKISCKF 60

Query: 74  FDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAH 133
            DSLAKLK +F N++KG+I EPQ++F SK+LSLHYDLE+ +A VKSS DVGPKL     H
Sbjct: 61  LDSLAKLKFAFHNNSKGEIAEPQISFVSKYLSLHYDLEDHSALVKSSVDVGPKLKLIGTH 120

Query: 134 DVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGEVSLVE----REEEEVK 189
           DVKAQQGEV +VANL DPGYAL+LS+P+P +  PKATFKFP GE+SL E     E+E+VK
Sbjct: 121 DVKAQQGEVTMVANLDDPGYALQLSTPLPSIALPKATFKFPQGEISLQEINDHDEDEQVK 180

Query: 190 KTLSISGIAKGQILNGICTAQYEEEDLKLRYCYK 223
            +LS+SG  KGQ+L G+CTAQY++++ KLRY YK
Sbjct: 181 NSLSVSGTLKGQLLKGLCTAQYKDQEFKLRYRYK 214

Source: Pisum sativum

Species: Pisum sativum

Genus: Pisum

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444675|ref|XP_004140099.1| PREDICTED: outer envelope pore protein 37, chloroplastic-like [Cucumis sativus]

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 125/181 (69%), Positives = 152/181 (83%)

Query: 43  LFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSK 102
           LF F  RPA+RVTSEFDS+SSIF HK+SCKL D+LAK+K SFQNDNKGQI + Q  F SK
Sbjct: 38  LFPFSKRPAIRVTSEFDSESSIFFHKVSCKLLDNLAKVKFSFQNDNKGQITDSQFQFRSK 97

Query: 103 HLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVP 162
           +LS+HYD +E NA ++SS DVGP+LHFRAAHDVK QQGE+GVVA + DPGY+LELSSPVP
Sbjct: 98  YLSIHYDPDEHNALLRSSIDVGPRLHFRAAHDVKGQQGELGVVAKIADPGYSLELSSPVP 157

Query: 163 YVGYPKATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGICTAQYEEEDLKLRYCY 222
            +G P+ATFKFP+GE+SL EREEEEV + +SI+G+ KG+ LNG C A Y++EDL+LRY Y
Sbjct: 158 AIGAPRATFKFPMGEISLEEREEEEVNRAMSINGVLKGKFLNGNCAAHYKDEDLELRYSY 217

Query: 223 K 223
           K
Sbjct: 218 K 218

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478237|ref|XP_002275927.2| PREDICTED: uncharacterized protein LOC100264576 [Vitis vinifera]

 Score =  260 bits (665), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 133/195 (68%), Positives = 157/195 (80%), Gaps = 8/195 (4%)

Query: 29  SPSPPQPQQQRTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDN 88
           SPSP  P        + +P RP++R+TSEFDSDSSIF HKISCKLFDSLAKLK+SFQN+N
Sbjct: 27  SPSPQGP--------WLWPRRPSIRLTSEFDSDSSIFFHKISCKLFDSLAKLKLSFQNNN 78

Query: 89  KGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANL 148
            G+IF+PQL F SKHLSLHYDL+  NAF+K  FDVG +LHF AAHDVKAQQGEV +VA+L
Sbjct: 79  DGEIFDPQLGFISKHLSLHYDLQNHNAFIKGCFDVGSRLHFNAAHDVKAQQGEVAMVADL 138

Query: 149 GDPGYALELSSPVPYVGYPKATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGICT 208
             PGY  ELSS VP +G+PKAT KFP GEVSL E+EEEEVKK LSI+GI + QILNG+ +
Sbjct: 139 AGPGYKFELSSAVPAIGFPKATLKFPAGEVSLEEKEEEEVKKMLSINGILQHQILNGVFS 198

Query: 209 AQYEEEDLKLRYCYK 223
           AQ+ ++DLKLRY YK
Sbjct: 199 AQFRDDDLKLRYLYK 213

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296084367|emb|CBI24755.3| unnamed protein product [Vitis vinifera]

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 133/195 (68%), Positives = 157/195 (80%), Gaps = 8/195 (4%)

Query: 29  SPSPPQPQQQRTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDN 88
           SPSP  P        + +P RP++R+TSEFDSDSSIF HKISCKLFDSLAKLK+SFQN+N
Sbjct: 24  SPSPQGP--------WLWPRRPSIRLTSEFDSDSSIFFHKISCKLFDSLAKLKLSFQNNN 75

Query: 89  KGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANL 148
            G+IF+PQL F SKHLSLHYDL+  NAF+K  FDVG +LHF AAHDVKAQQGEV +VA+L
Sbjct: 76  DGEIFDPQLGFISKHLSLHYDLQNHNAFIKGCFDVGSRLHFNAAHDVKAQQGEVAMVADL 135

Query: 149 GDPGYALELSSPVPYVGYPKATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGICT 208
             PGY  ELSS VP +G+PKAT KFP GEVSL E+EEEEVKK LSI+GI + QILNG+ +
Sbjct: 136 AGPGYKFELSSAVPAIGFPKATLKFPAGEVSLEEKEEEEVKKMLSINGILQHQILNGVFS 195

Query: 209 AQYEEEDLKLRYCYK 223
           AQ+ ++DLKLRY YK
Sbjct: 196 AQFRDDDLKLRYLYK 210

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449489770|ref|XP_004158410.1| PREDICTED: outer envelope pore protein 37, chloroplastic-like, partial [Cucumis sativus]

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 125/181 (69%), Positives = 152/181 (83%)

Query: 43  LFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSK 102
           LF F  RPA+RVTSEFDS+SSIF HK+SCKL D+LAK+K SFQNDNKGQI + Q  F SK
Sbjct: 74  LFPFSKRPAIRVTSEFDSESSIFFHKVSCKLLDNLAKVKFSFQNDNKGQITDSQFQFRSK 133

Query: 103 HLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVP 162
           +LS+HYD +E NA ++SS DVGP+LHFRAAHDVK QQGE+GVVA + DPGY+LELSSPVP
Sbjct: 134 YLSIHYDPDEHNALLRSSIDVGPRLHFRAAHDVKGQQGELGVVAKIADPGYSLELSSPVP 193

Query: 163 YVGYPKATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGICTAQYEEEDLKLRYCY 222
            +G P+ATFKFP+GE+SL EREEEEV + +SI+G+ KG+ LNG C A Y++EDL+LRY Y
Sbjct: 194 AIGAPRATFKFPMGEISLEEREEEEVNRAMSINGVLKGKFLNGNCAAHYKDEDLELRYSY 253

Query: 223 K 223
           K
Sbjct: 254 K 254

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255645606|gb|ACU23297.1| unknown [Glycine max]

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 122/196 (62%), Positives = 153/196 (78%), Gaps = 2/196 (1%)

Query: 29  SPSPPQPQQQRTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDN 88
           +P+ P    +R S + SFP RPALRVTSEFDS+S++F HKISCKL DSLAK K SF +  
Sbjct: 10  NPNYPAVDYKRLS-ILSFPRRPALRVTSEFDSESAVFFHKISCKLLDSLAKFKFSFNHSG 68

Query: 89  KG-QIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVAN 147
           KG  I EPQ +F SKHLSLHYDLE+ NA VK+S D+ P L   A+HD+KAQQGEV V+AN
Sbjct: 69  KGGDISEPQFSFVSKHLSLHYDLEDHNALVKTSIDLAPSLQLTASHDLKAQQGEVTVLAN 128

Query: 148 LGDPGYALELSSPVPYVGYPKATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGIC 207
           L DP Y+L+LS+P+P VG PKATF+FPLGE+SL E++EEEV   LS+ G+ KGQ+ NG+C
Sbjct: 129 LADPAYSLQLSTPLPSVGLPKATFRFPLGELSLQEKQEEEVNNLLSVDGVLKGQLFNGLC 188

Query: 208 TAQYEEEDLKLRYCYK 223
           +A Y++E+LKLRY YK
Sbjct: 189 SAHYKDEELKLRYGYK 204

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356562587|ref|XP_003549551.1| PREDICTED: uncharacterized protein LOC100789625 [Glycine max]

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 119/183 (65%), Positives = 147/183 (80%), Gaps = 1/183 (0%)

Query: 42  SLFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKG-QIFEPQLAFT 100
           S+ SFP RPALRVTSEFDS+S++F HKISCKL DSLAK K SF +  KG  I EPQ +F 
Sbjct: 22  SILSFPRRPALRVTSEFDSESAVFFHKISCKLLDSLAKFKFSFNHSGKGGDISEPQFSFV 81

Query: 101 SKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSP 160
           SKHLSLHYDLE+ NA VK+S D+ P L   A+HD+KAQQGEV V+ANL DP Y+L+LS+P
Sbjct: 82  SKHLSLHYDLEDHNALVKTSIDLAPSLQLTASHDLKAQQGEVTVLANLADPAYSLQLSTP 141

Query: 161 VPYVGYPKATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGICTAQYEEEDLKLRY 220
           +P VG PKATF+FPLGE+SL E++EEEV   LS+ G+ KGQ+ NG+C+A Y++E+LKLRY
Sbjct: 142 LPSVGLPKATFRFPLGELSLQEKQEEEVNNLLSVDGVLKGQLFNGLCSAHYKDEELKLRY 201

Query: 221 CYK 223
            YK
Sbjct: 202 GYK 204

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	228
UNIPROTKB|Q4LDF9	329	OEP37 "Outer envelope pore pro	0.793	0.550	0.610	6.6e-58
TAIR|locus:2051844	343	OEP37 "chloroplast outer envel	0.934	0.620	0.522	3.3e-56

UNIPROTKB|Q4LDF9 OEP37 "Outer envelope pore protein 37, chloroplastic" [Pisum sativum (taxid:3888)]

 Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
 Identities = 113/185 (61%), Positives = 141/185 (76%)

Query:    43 LFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSK 102
             +FSFP RPALR+T+EFDS+S++F HKISCK  DSLAKLK +F N++KG+I EPQ++F SK
Sbjct:    30 IFSFPKRPALRITTEFDSESTVFFHKISCKFLDSLAKLKFAFHNNSKGEIAEPQISFVSK 89

Query:   103 HLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVP 162
             +LSLHYDLE+ +A VKSS DVGPKL     HDVKAQQGEV +VANL DPGYAL+LS+P+P
Sbjct:    90 YLSLHYDLEDHSALVKSSVDVGPKLKLIGTHDVKAQQGEVTMVANLDDPGYALQLSTPLP 149

Query:   163 YVGYPKATFKFPLGXXXXXXXXXXXX----KKTLSISGIAKGQILNGICTAQYEEEDLKL 218
              +  PKATFKFP G                K +LS+SG  KGQ+L G+CTAQY++++ KL
Sbjct:   150 SIALPKATFKFPQGEISLQEINDHDEDEQVKNSLSVSGTLKGQLLKGLCTAQYKDQEFKL 209

Query:   219 RYCYK 223
             RY YK
Sbjct:   210 RYRYK 214

GO:0005216 "ion channel activity" evidence=IDA

GO:0006812 "cation transport" evidence=IDA

GO:0031359 "integral to chloroplast outer membrane" evidence=ISS

GO:0042802 "identical protein binding" evidence=IDA

TAIR|locus:2051844 OEP37 "chloroplast outer envelope protein 37" [Arabidopsis thaliana (taxid:3702)]

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 116/222 (52%), Positives = 153/222 (68%)

Query:     5 SPPSPSLQIPNHMVXXXXXXXXXXXXXXXXXXXXRTSSLFSFPSRPALRVTSEFDSDSSI 64
             +PP PS   P H +                     T S     +RP LRVTSEFDSDS +
Sbjct:    13 TPPPPSSPSPTHQIQSGTSELSPPSRPPCS-----TLSFLKTANRPKLRVTSEFDSDSLL 67

Query:    65 FLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVG 124
             FL+K+SCKLFD+LAKLK+SFQN+++ +I +PQ++FTSKH+S+ YD+EE+N F+KS+ DV 
Sbjct:    68 FLNKVSCKLFDNLAKLKLSFQNNSQREISQPQVSFTSKHVSVLYDVEEKNTFIKSTLDVH 127

Query:   125 PKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGXXXXXXXX 184
             P+L  RA H+VKAQQGEV + ANL +PGY+LELSSPVP +GYP+AT KFPLG        
Sbjct:   128 PRLQLRALHNVKAQQGEVAMEANLTEPGYSLELSSPVP-IGYPRATLKFPLGEISLQEKD 186

Query:   185 XXXX---KKTLSISGIAKGQILNGICTAQYEEEDLKLRYCYK 223
                    K+TLS++GI K Q++NG+CTA Y +E+L+LRY YK
Sbjct:   187 EEEEEKQKRTLSVNGILKRQVMNGVCTALYTDEELRLRYAYK 228


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.135   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      228       196   0.00080  111 3  11 22  0.47    32
                                                     31  0.44    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  564 (60 KB)
  Total size of DFA:  151 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.71u 0.18s 17.89t   Elapsed:  00:00:01
  Total cpu time:  17.71u 0.18s 17.89t   Elapsed:  00:00:01
  Start:  Mon May 20 21:32:30 2013   End:  Mon May 20 21:32:31 2013

GO:0005634 "nucleus" evidence=ISM

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

GO:0005216 "ion channel activity" evidence=IDA

GO:0006812 "cation transport" evidence=IDA

GO:0031359 "integral to chloroplast outer membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O80565	OEP37_ARATH	No assigned EC number	0.5633	0.9736	0.6472	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	228
PHA01732	94	proline-rich protein	96.16
KOG1924	1102	consensus RhoA GTPase effector DIA/Diaphanous [Sig	93.91
KOG1924	1102	consensus RhoA GTPase effector DIA/Diaphanous [Sig	92.53
PHA01732	94	proline-rich protein	92.51
PF01690	465	PLRV_ORF5: Potato leaf roll virus readthrough prot	85.93

>PHA01732 proline-rich protein

Probab=96.16  E-value=0.009  Score=47.56  Aligned_cols=20  Identities=25%  Similarity=0.335  Sum_probs=15.5

Q ss_pred             ccccceeeeeeecCCCCCCC
Q 027126           74 FDSLAKLKVSFQNDNKGQIF   93 (228)
Q Consensus        74 L~G~AKLrLAghtD~SG~~~   93 (228)
                      -.|.|.||+--|+.+.|+++
T Consensus        61 a~gTasLrIpkqtg~~g~~s   80 (94)
T PHA01732         61 AGGTASLRIPKQSGTQGSIS   80 (94)
T ss_pred             ccCcceeEeecccccccccc
Confidence            35778899988888887765

>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]

Probab=93.91  E-value=0.095  Score=55.01  Aligned_cols=11  Identities=0%  Similarity=0.223  Sum_probs=5.4

Q ss_pred             eeeeeecCCcc
Q 027126           53 RVTSEFDSDSS   63 (228)
Q Consensus        53 rvtsEfDSe~s   63 (228)
                      +=.-+|+-|..
T Consensus       615 kpKK~~k~e~~  625 (1102)
T KOG1924|consen  615 KPKKVYKPEVP  625 (1102)
T ss_pred             CccccCCCCCc
Confidence            33445665543

>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]

Probab=92.53  E-value=0.16  Score=53.38  Aligned_cols=9  Identities=11%  Similarity=0.246  Sum_probs=3.8

Q ss_pred             hhhhhhhhc
Q 027126          112 EQNAFVKSS  120 (228)
Q Consensus       112 ~rNALvr~~  120 (228)
                      -||+++.-+
T Consensus       718 ik~~ILevn  726 (1102)
T KOG1924|consen  718 IKNVILEVN  726 (1102)
T ss_pred             HHHHHhhcc
Confidence            344444433

>PHA01732 proline-rich protein

Probab=92.51  E-value=0.11  Score=41.49  Aligned_cols=9  Identities=0%  Similarity=-0.333  Sum_probs=3.5

Q ss_pred             CCCCCCCCC
Q 027126           38 QRTSSLFSF   46 (228)
Q Consensus        38 ~~~~~~~~~   46 (228)
                      ++++.+.+.
T Consensus        28 pppP~p~p~   36 (94)
T PHA01732         28 PPAPVPEPT   36 (94)
T ss_pred             CCCCCCCcc
Confidence            333444443

>PF01690 PLRV_ORF5: Potato leaf roll virus readthrough protein; InterPro: IPR002929 This family consists mainly of the Potato leafroll virus (PLrV) read through protein otherwise known as the minor capsid protein

Probab=85.93  E-value=0.6  Score=46.08  Aligned_cols=11  Identities=0%  Similarity=-0.339  Sum_probs=5.3

Q ss_pred             CCCceeeeecc
Q 027126           93 FEPQLAFTSKH  103 (228)
Q Consensus        93 ~~P~~~~v~K~  103 (228)
                      ..=..|||+-+
T Consensus       121 dg~~~GlIAY~  131 (465)
T PF01690_consen  121 DGKWDGLIAYD  131 (465)
T ss_pred             CCceeeeEEec
Confidence            33445665533

This is generated via a readthrough of open reading frame 3, the coat protein, allowing transcription of open reading frame 5 to give an extended coat protein with a large C-terminal addition or read through domain []. The read through protein is essential for the circulative aphid transmission of PLrV [] and Beet western yellows virus []. The N-terminal region of the luteovirus readthrough domain determines virus binding to Buchnera GroEL and is essential for virus persistence in the aphid [].; GO: 0019028 viral capsid

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00