Citrus Sinensis ID: 027152

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------
Protein Sequence
MACASQAMISANSYIFTSPKLFFNRKHKNQLYSRKRNVNLFAVRASSDDPDDCNDEECAPDKEVGKVSMEWLAGEKTKVAGTFPPRKREWTGYVEKDTAGQTNIYAVEPTVYVADSAISSGSAGSSAAGSENTIAITAGVAFLAIAAASSILLQVGKNPPPMQTIDYNGPSLSYYINKFKPPAFVQASVSSPAESSPSVQAETSAQEVPQIQIQSESNPEPSTNNIS
Secondary Structure (PSIPRED)
cccccHHHHccccEEEEcccHHHcccccccccccccEEEEEEEEcccccccccccccccccccccEEEcEEEcccccEEEEEccccccccccEEEEccccccEEEEEcccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHcEEEcccccccccccccccccccHHHHHccccccHHcccccccccccccccccccccccccEEEcccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHccccEEEEcccHHHHccccccccccccEEEEEEEEccccccHHccccHccccccccEEEEEEEcccccEEEccccccccccEEEEEEcccccccEEEEccEEEEEEHEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEcccccHHHHHccccHHHHHcccccccccccccccccccccccccccHccccccccccccc
Coil and Loop (DISEMBL)
MACASQAMISansyiftspklffnrkhknqLYSRKRNVNLFAVrassddpddcndeecapdkevgKVSMEWLAgektkvagtfpprkrewtgyvekdtagqtniyaveptVYVAdsaissgsagssaagsenTIAITAGVAFLAIAAASSILLqvgknpppmqtidyngpslsyyinkfkppafvqasvsspaesspsvqaetsaqevpqiqiqsesnpepstnnis
Flexible Loop (DISEMBL)
macasqamisansyiftspkLFFNRKHKNQLYSRKRNVNLFAVrassddpddcndeecapdkevgkvsmewlagektkvagtfpprkrewtgyvekdtagqtniyAVEPTVYVADSAISSGSAGSSAAGSENTIAITAGVAFLAIAAASSILLQVGKNPPPMQTIDYNGPSLSYYINKFKPPAFVQASVSSPAESSPSVQAETSAQEvpqiqiqsesnpepstnnis
Low Complexity Region (SEG)
MACASQAMISANSYIFTSPKLFFNRKHKNQLYSRKRNVNLFAVRASSDDPDDCNDEECAPDKEVGKVSMEWLAGEKTKVAGTFPPRKREWTGYVEKDTAGQTNIYAVEPTVYVADsaissgsagssaagsENTIaitagvaflaiaaassillQVGKNPPPMQTIDYNGPSLSYYINKFKPPAFvqasvsspaesspsvqaeTSAQEVPQIQIQSESNPEPSTNNIS
Disordered region (IsUnstruct)
********ISANSYIFTSPKLFFNRKHKNQLYSRKRNVNLFAV*************************MEWLAGEKTKVAGTFPPRKREWTGYVEKDTAGQTNIYAVEPTVY********************TIAITAGVAFLAIAAASSILLQVGKNPPPMQTIDYNGPSLSYYINKFKPPAF*******************************************
Disordered Region (DISOPRED)
********ISANSYIFTSP***************************************APDKEVGKVSMEWLAGEKTKVAGTFPPRKREWTGYVEKDTAGQTNIYAVEPTVYVADSAI**************TIAITAGVAFLAIAAASSILLQVG***********NGPSLSYYINKFKPPA********************************************
Disordered Region (DISEMBL)
********ISANSYIFTSPKLFFNRKHKNQLYSRKRNVNLFAVRA*********DEECAPDKEVGKVSMEWLAGEKTKVAGTFPPRKREWTGYVEKDTAGQTNIYAVEPTVYVADSAI************ENTIAITAGVAFLAIAAASSILLQVGKNPPPMQTIDYNGPSLSYYINKFKPPAFVQ*****************************************
Disordered Region (DISPRO)
*AC*********SYIFTSPKLFFNRKHKNQLYSRKRNVNLFAVRASSDDPDDCNDEECAPDKEVGKVSMEWLAGEKTKVAGTFPPRKREWTGYVEKDTAGQTNIYAVEPTVYVADSAI************ENTIAITAGVAFLAIAAASSILLQVGKNPPPMQTIDYNGPSLSYYINKFKPPAFVQA****************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MACASQAMISANSYIFTSPKLFFNRKHKNQLYSRKRNVNLFAVRASSDDPDDCNDEECAPDKEVGKVSMEWLAGEKTKVAGTFPPRKREWTGYVEKDTAGQTNIYAVEPTVYVADSAISSGSAGSSAAGSENTIAITAGVAFLAIAAASSILLQVGKNPPPMQTIDYNGPSLSYYINKFKPPAFVQASVSSPAESSPSVQAETSAQEVPQIQIQSESNPEPSTNNIS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	227
255569149	226	conserved hypothetical protein [Ricinus	0.964	0.969	0.678	9e-73
356508288	223	PREDICTED: uncharacterized protein LOC10	0.964	0.982	0.640	1e-72
255635272	196	unknown [Glycine max]	0.828	0.959	0.688	3e-68
449449248	238	PREDICTED: uncharacterized protein LOC10	0.916	0.873	0.612	1e-67
449528868	306	PREDICTED: uncharacterized LOC101215285,	0.977	0.725	0.560	4e-67
18415378	235	proline-rich family protein [Arabidopsis	0.920	0.889	0.624	9e-66
21553857	235	unknown [Arabidopsis thaliana]	0.920	0.889	0.624	1e-65
350536853	238	uncharacterized protein LOC543930 [Solan	0.933	0.890	0.593	4e-65
388512217	252	unknown [Lotus japonicus]	0.942	0.849	0.603	4e-64
357456281	269	hypothetical protein MTR_3g013460 [Medic	0.863	0.728	0.631	8e-61

>gi|255569149|ref|XP_002525543.1| conserved hypothetical protein [Ricinus communis] gi|223535122|gb|EEF36802.1| conserved hypothetical protein [Ricinus communis]

 Score =  278 bits (712), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 154/227 (67%), Positives = 188/227 (82%), Gaps = 8/227 (3%)

Query: 1   MACASQAMISANSYIFTSPKLFFNRKHKNQLYSRKRNVNLFAVRASSDDPDDCNDEECAP 60
           MACAS+AMI+AN+  FTSP+ F     K Q ++R R++ LF +RA +DD D CNDEECAP
Sbjct: 1   MACASRAMITANTCTFTSPRFF----KKYQTFNR-RSLKLFTIRAETDDAD-CNDEECAP 54

Query: 61  DKEVGKVSMEWLAGEKTKVAGTFPPRKREWTGYVEKDTAGQTNIYAVEPTVYVADSAISS 120
           DKEVGKVSMEWLAG+KTKVAGTFPPR R WTGYVEKDTAGQTNIY+VEP VYVA+SAISS
Sbjct: 55  DKEVGKVSMEWLAGDKTKVAGTFPPRTRGWTGYVEKDTAGQTNIYSVEPVVYVAESAISS 114

Query: 121 GSAGSSAAGSENTIAITAGVAFLAIAAASSILLQVGKNPPPMQTIDYNGPSLSYYINKFK 180
           G+AGSSA G+ENT AI AG+A +++AAASSILLQVGK P  ++T++Y+GPSL+YYINKFK
Sbjct: 115 GTAGSSADGAENTAAIAAGIALISVAAASSILLQVGKTPAEIKTVEYSGPSLTYYINKFK 174

Query: 181 PPAFVQASVSSPAESSPSVQA--ETSAQEVPQIQIQSESNPEPSTNN 225
           P   VQA++ S  ESSPS+Q   E+SA EV QIQ+QS+  PEP+T++
Sbjct: 175 PAEIVQAALPSQTESSPSIQLPPESSAPEVSQIQVQSQVQPEPATSS 221

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508288|ref|XP_003522890.1| PREDICTED: uncharacterized protein LOC100779195 [Glycine max]

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 146/228 (64%), Positives = 179/228 (78%), Gaps = 9/228 (3%)

Query: 1   MACASQAMISANSYIFTSPKLFFNRKHKNQLYSRKRNVNLFAVRASSDDPDDCNDEECAP 60
           MACA QA ++AN+Y+F+S + F  +  KN     KR  +LF VR  SD+  DCN+EECAP
Sbjct: 1   MACALQATLAANAYVFSS-RRFSLKLQKNS----KRRFSLFTVRVDSDE-SDCNEEECAP 54

Query: 61  DKEVGKVSMEWLAGEKTKVAGTFPPRKR-EWTGYVEKDTAGQTNIYAVEPTVYVADSAIS 119
           DKEVGKVS+EWLAGEKTKV GTFPPR++  WTGYVEKDTAGQTNIY+VEP VYVA+SAIS
Sbjct: 55  DKEVGKVSVEWLAGEKTKVVGTFPPRRKPGWTGYVEKDTAGQTNIYSVEPAVYVAESAIS 114

Query: 120 SGSAGSSAAGSENTIAITAGVAFLAIAAASSILLQVGKNPPP-MQTIDYNGPSLSYYINK 178
           SG+AGSS+ G ENT AI  G+A ++IAAASSILLQVGKN PP +QT +Y+GPSLSYYIN+
Sbjct: 115 SGTAGSSSDGVENTAAIVTGLALISIAAASSILLQVGKNAPPQIQTAEYSGPSLSYYINQ 174

Query: 179 FKPPAFVQASVSSPAESSPSVQAETSAQEVPQIQIQSESNPEPSTNNI 226
           FKP    + SV S AE S SVQ E+S  EV Q+Q+++++ PE S+ NI
Sbjct: 175 FKPLEITEVSVPSEAELSSSVQLESSPPEVSQVQVEAQA-PETSSVNI 221

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255635272|gb|ACU17990.1| unknown [Glycine max]

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 135/196 (68%), Positives = 159/196 (81%), Gaps = 8/196 (4%)

Query: 1   MACASQAMISANSYIFTSPKLFFNRKHKNQLYSRKRNVNLFAVRASSDDPDDCNDEECAP 60
           MACA QA ++AN+Y F+S +  F+ KH+    + KR  +LF VRA SDD  DCN+EECAP
Sbjct: 1   MACALQATLAANTYAFSSRR--FSLKHQK---NSKRRFSLFTVRADSDD-SDCNEEECAP 54

Query: 61  DKEVGKVSMEWLAGEKTKVAGTFPPRKR-EWTGYVEKDTAGQTNIYAVEPTVYVADSAIS 119
           DKEVGKVS+EWLAGEKTKV GTFPPR++  WTGYVEKDTAGQTNIY+VEP VYVA+SAIS
Sbjct: 55  DKEVGKVSVEWLAGEKTKVVGTFPPRRKPGWTGYVEKDTAGQTNIYSVEPAVYVAESAIS 114

Query: 120 SGSAGSSAAGSENTIAITAGVAFLAIAAASSILLQVGKNPPP-MQTIDYNGPSLSYYINK 178
           SG+AGSS+ G+ENT AI AG+A ++IAAASSILLQVGKN PP +QT  Y+GPSLSYYINK
Sbjct: 115 SGTAGSSSDGAENTAAIVAGLALISIAAASSILLQVGKNAPPQIQTAQYSGPSLSYYINK 174

Query: 179 FKPPAFVQASVSSPAE 194
           F PP   Q SV S A+
Sbjct: 175 FTPPEITQVSVPSEAD 190

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449248|ref|XP_004142377.1| PREDICTED: uncharacterized protein LOC101215285 [Cucumis sativus]

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 131/214 (61%), Positives = 162/214 (75%), Gaps = 6/214 (2%)

Query: 1   MACASQAMISANSYIFTSPKLFFNRKHKNQLYSRKRNVNLFAVRASSDDPDDCNDEECAP 60
           MACASQ +I+ANS  F S +     +   +L+S+  +  +  VRASS+D  DCN +ECAP
Sbjct: 2   MACASQTLIAANSCSFPSHRAM---RKSQRLFSQNTSNLVLTVRASSED-SDCNVDECAP 57

Query: 61  DKEVGKVSMEWLAGEKTKVAGTFPPRKREWTGYVEKDTAGQTNIYAVEPTVYVADSAISS 120
           DKEVGK+SMEWLAGEKTKV GT+PPR++ WTGYVEKDTAGQTNIY++EP VYVA+SAISS
Sbjct: 58  DKEVGKISMEWLAGEKTKVVGTYPPRRKGWTGYVEKDTAGQTNIYSIEPVVYVAESAISS 117

Query: 121 GSAGSSAAGSENTIAITAGVAFLAIAAASSILLQVGKNPPPMQTIDYNGPSLSYYINKFK 180
           G+AGSS+ G+ENT+AI  G+A +A+A ASSILLQVGK PP ++T++Y GPSLSYYINKF 
Sbjct: 118 GTAGSSSEGAENTLAIAGGIALIAVAVASSILLQVGKKPPEVKTVEYTGPSLSYYINKFN 177

Query: 181 PPAFVQASVSSPAESSPSVQAETSAQEVPQIQIQ 214
               VQ  V S  ESS  +   T   +V QIQIQ
Sbjct: 178 TREIVQPPVQSEPESSSQIDGVTP--QVTQIQIQ 209

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449528868|ref|XP_004171424.1| PREDICTED: uncharacterized LOC101215285, partial [Cucumis sativus]

 Score =  259 bits (663), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 134/239 (56%), Positives = 173/239 (72%), Gaps = 17/239 (7%)

Query: 1   MACASQAMISANSYIFTSPKLFFNRKHKNQLYSRKRNVNLFAVRASSDDPDDCNDEECAP 60
           MACASQ +I+ANS  F S +     +   +L+S+  +  +  VRASS+D  DCN +ECAP
Sbjct: 70  MACASQTLIAANSCSFPSHRAM---RKSQRLFSQNTSNLVLTVRASSED-SDCNVDECAP 125

Query: 61  DKEVGKVSMEWLAGEKTKVAGTFPPRKREWTGYVEKDTAGQTNIYAVEPTVYVADSAISS 120
           DKEVGK+SMEWLAGEKTKV GT+PPR++ WTGYVEKDTAGQTNIY++EP VYVA+SAISS
Sbjct: 126 DKEVGKISMEWLAGEKTKVVGTYPPRRKGWTGYVEKDTAGQTNIYSIEPVVYVAESAISS 185

Query: 121 GSAGSSAAGSENTIAITAGVAFLAIAAASSILLQVGKNPPPMQTIDYNGPSLSYYINKFK 180
           G+AGSS+ G+ENT+AI  G+A +A+A ASSILLQVGK PP ++T++Y GPSLSYYINKF 
Sbjct: 186 GTAGSSSEGAENTLAIAGGIALIAVAVASSILLQVGKKPPEVKTVEYTGPSLSYYINKFN 245

Query: 181 PPAFVQASVSSPAESSP------------SVQAETSAQEVPQIQIQSESNPEPSTNNIS 227
               VQ  V S  ESS              +Q +  A EV  +Q++S++  EPS++ +S
Sbjct: 246 TREIVQPPVQSEPESSSQFDGVTPQVTQIQIQPDIPAPEVTDVQVESQTT-EPSSSAVS 303

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18415378|ref|NP_568178.1| proline-rich family protein [Arabidopsis thaliana] gi|9759558|dbj|BAB11160.1| unnamed protein product [Arabidopsis thaliana] gi|15293031|gb|AAK93626.1| unknown protein [Arabidopsis thaliana] gi|20258893|gb|AAM14118.1| unknown protein [Arabidopsis thaliana] gi|332003716|gb|AED91099.1| proline-rich family protein [Arabidopsis thaliana]

 Score =  255 bits (652), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 138/221 (62%), Positives = 159/221 (71%), Gaps = 12/221 (5%)

Query: 5   SQAMISANSYIFTSPK---LFFNRKHKNQLYSRKRNVNLFAVRASSDDPDDCNDEECAPD 61
           S  ++S N Y+F SPK    F N K      S  R +    VRASSDD  DCN EECAP+
Sbjct: 2   SNVLLSPNGYVFASPKPLGRFINSK------SGGRKLFFSVVRASSDD-ADCNAEECAPE 54

Query: 62  KEVGKVSMEWLAGEKTKVAGTFPPRK-REWTGYVEKDTAGQTNIYAVEPTVYVADSAISS 120
           KEVG VSMEWLAGEKTKV GTFPPRK R WTGYVEKDTAGQTN+Y++EP VYVA+SAISS
Sbjct: 55  KEVGTVSMEWLAGEKTKVVGTFPPRKPRGWTGYVEKDTAGQTNVYSIEPAVYVAESAISS 114

Query: 121 GSAGSSAAGSENTIAITAGVAFLAIAAASSILLQVGKNPPPM-QTIDYNGPSLSYYINKF 179
           G+AGSSA G+ENT AI AG+A +A+AAASSILLQVGK+ P   + +DY+GPSLSYYINKF
Sbjct: 115 GTAGSSADGAENTAAIVAGIALIAVAAASSILLQVGKDAPTRPKAVDYSGPSLSYYINKF 174

Query: 180 KPPAFVQASVSSPAESSPSVQAETSAQEVPQIQIQSESNPE 220
           KP   VQ S  S  E+ P  + ETS  E P +  Q  S PE
Sbjct: 175 KPSEIVQPSTPSVTEAPPVAELETSLPETPSVAQQETSLPE 215

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21553857|gb|AAM62950.1| unknown [Arabidopsis thaliana]

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 138/221 (62%), Positives = 159/221 (71%), Gaps = 12/221 (5%)

Query: 5   SQAMISANSYIFTSPK---LFFNRKHKNQLYSRKRNVNLFAVRASSDDPDDCNDEECAPD 61
           S  ++S N Y+F SPK    F N K      S  R +    VRASSDD  DCN EECAP+
Sbjct: 2   SNVLLSPNGYVFASPKPLGRFINSK------SGGRKLFFSVVRASSDD-ADCNAEECAPE 54

Query: 62  KEVGKVSMEWLAGEKTKVAGTFPPRK-REWTGYVEKDTAGQTNIYAVEPTVYVADSAISS 120
           KEVG VSMEWLAGEKTKV GTFPPRK R WTGYVEKDTAGQTN+Y++EP VYVA+SAISS
Sbjct: 55  KEVGTVSMEWLAGEKTKVVGTFPPRKPRGWTGYVEKDTAGQTNVYSIEPAVYVAESAISS 114

Query: 121 GSAGSSAAGSENTIAITAGVAFLAIAAASSILLQVGKNPPPM-QTIDYNGPSLSYYINKF 179
           G+AGSSA G+ENT AI AG+A +A+AAASSILLQVGK+ P   + +DY+GPSLSYYINKF
Sbjct: 115 GTAGSSADGAENTAAIVAGIALIAVAAASSILLQVGKDAPTRPKAVDYSGPSLSYYINKF 174

Query: 180 KPPAFVQASVSSPAESSPSVQAETSAQEVPQIQIQSESNPE 220
           KP   VQ S  S  E+ P  + ETS  E P +  Q  S PE
Sbjct: 175 KPSEIVQPSTPSVTEAPPVAELETSLPETPPVAQQETSLPE 215

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350536853|ref|NP_001234524.1| uncharacterized protein LOC543930 [Solanum lycopersicum] gi|51457942|gb|AAU03360.1| unknown protein [Solanum lycopersicum]

 Score =  253 bits (646), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 137/231 (59%), Positives = 173/231 (74%), Gaps = 19/231 (8%)

Query: 1   MACASQAMISANSYIFTSP---KLFFNRKHKNQLYSRKRNVNLFAVRASSDDPDDCNDEE 57
           MACA+   +SANS    S    +L F+   K+    ++ ++  F VRAS+DD  DCN EE
Sbjct: 1   MACAA---LSANSCTIASSSTGRLSFSTYQKDSKLRQRHSLVRFRVRASTDD-SDCNAEE 56

Query: 58  CAPDKEVGKVSMEWLAGEKTKVAGTFPPRK-REWTGYVEKDTAGQTNIYAVEPTVYVADS 116
           CAPDKEVGKVSMEW+A + TKV GTFPPRK R WTGYVEKDTAGQTNIY+VEP VYVA+S
Sbjct: 57  CAPDKEVGKVSMEWVAMDNTKVVGTFPPRKPRGWTGYVEKDTAGQTNIYSVEPAVYVAES 116

Query: 117 AISSGSAGSSAAGSENTIAITAGVAFLAIAAASSILLQVGKN-PPPMQTIDYNGPSLSYY 175
           AISSG+AG+S+ G+ENT AI+AG+A +++AAASSILLQVGKN PPP+QT++Y GPSLSYY
Sbjct: 117 AISSGTAGTSSDGAENTKAISAGIALISVAAASSILLQVGKNSPPPIQTVEYRGPSLSYY 176

Query: 176 INKFKPPAFVQASVSSPAESSPSV-------QAETSAQE--VPQIQIQSES 217
           INK KP   VQAS++  A ++P         + E+SA E   PQ+++QSE+
Sbjct: 177 INKLKPAEIVQASITE-APTAPETEEVAITPEVESSAPEAPAPQVEVQSEA 226

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388512217|gb|AFK44170.1| unknown [Lotus japonicus]

 Score =  249 bits (637), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 134/222 (60%), Positives = 164/222 (73%), Gaps = 8/222 (3%)

Query: 1   MACASQAMISANSYIFTSPKLFFNRKHKNQLYSRKRNVNLFAVRASSDDPDDCNDEECAP 60
           M+CA QA +++N+  F+S +L  N    NQ +S KR+  L  VRA+SDD  DCNDEECAP
Sbjct: 1   MSCALQATLASNTCAFSSRRLSLN----NQKFS-KRSSYLLTVRANSDD-ADCNDEECAP 54

Query: 61  DKEVGKVSMEWLAGEKTKVAGTFPPRK-REWTGYVEKDTAGQTNIYAVEPTVYVADSAIS 119
           DKEVGK+S+EWLAGEKTKV GTFPPR+ + WTGYVEKDTAGQTNIY+VEP VYVA+S +S
Sbjct: 55  DKEVGKISVEWLAGEKTKVVGTFPPRRAKGWTGYVEKDTAGQTNIYSVEPAVYVAESVLS 114

Query: 120 SGSAGSSAAGSENTIAITAGVAFLAIAAASSILLQVGKNPPPMQTIDYNGPSLSYYINKF 179
           SG+AGSS  G+ENT  I A +A ++IAAASSILLQVGK  PP+Q  +Y+ PSLSYYI+KF
Sbjct: 115 SGTAGSSKEGAENTAGIVAFLALISIAAASSILLQVGKTTPPIQRAEYSRPSLSYYISKF 174

Query: 180 KPPAFVQASVSSPAE-SSPSVQAETSAQEVPQIQIQSESNPE 220
           KPP   QA     AE  S  VQ ET+ +    +  +SE  PE
Sbjct: 175 KPPEITQAPAPIEAELPSSVVQPETAPEVSSSVAAESEIQPE 216

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357456281|ref|XP_003598421.1| hypothetical protein MTR_3g013460 [Medicago truncatula] gi|355487469|gb|AES68672.1| hypothetical protein MTR_3g013460 [Medicago truncatula]

 Score =  239 bits (609), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 130/206 (63%), Positives = 160/206 (77%), Gaps = 10/206 (4%)

Query: 1   MACASQAMISANSYIFTSPKLFFNRKHKNQLYSRKRNVNLFAVRASSDDPDDCNDEECAP 60
           MACA QA I+ N+  F++ K    ++  N     KR+  +F VRASS+   DCNDEECAP
Sbjct: 1   MACALQATITTNTCAFSTRKFSLKQQKIN-----KRSSCMFIVRASSES--DCNDEECAP 53

Query: 61  DKEVGKVSMEWLAGEKTKVAGTFPPRKRE-WTGYVEKDTAGQTNIYAVEPTVYVADSAIS 119
           DKEVGKVSMEWLA EKTKV GT+PPR+++ WTGYVEKDTAGQTNIY+VEP VYVA+SAIS
Sbjct: 54  DKEVGKVSMEWLAEEKTKVVGTYPPRRKQGWTGYVEKDTAGQTNIYSVEPAVYVAESAIS 113

Query: 120 SGSAGSSAAGSENTIAITAGVAFLAIAAASSILLQVGKNPPP-MQTIDYNGPSLSYYINK 178
           SG+AG+S+ G++NT AI AG+A ++IAAASSILLQVGKN PP +Q ++Y+GPSLSYYIN+
Sbjct: 114 SGTAGTSSDGAQNTAAIAAGLALISIAAASSILLQVGKNSPPQVQKVEYSGPSLSYYINE 173

Query: 179 FKPPAFVQA-SVSSPAESSPSVQAET 203
           FK     QA SVS+  E S SV  E+
Sbjct: 174 FKTQEITQAPSVSTETELSSSVPTES 199

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	227
TAIR|locus:2169359	235	AT5G07020 "AT5G07020" [Arabido	0.920	0.889	0.475	2.1e-45

TAIR|locus:2169359 AT5G07020 "AT5G07020" [Arabidopsis thaliana (taxid:3702)]

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 105/221 (47%), Positives = 119/221 (53%)

Query:     5 SQAMISANSYIFTSPK---LFFNRKHKNQLYSRKRNVNLFAVRASSDDPDDCNDEECAPD 61
             S  ++S N Y+F SPK    F N K      S  R +    VRASSDD D CN EECAP+
Sbjct:     2 SNVLLSPNGYVFASPKPLGRFINSK------SGGRKLFFSVVRASSDDAD-CNAEECAPE 54

Query:    62 KEVGKVSMEWLAGEKTKVAGTFPPRK-REWTGYVEKDTAGQTNIYAVEPTVYVADXXXXX 120
             KEVG VSMEWLAGEKTKV GTFPPRK R WTGYVEKDTAGQTN+Y++EP VYVA+     
Sbjct:    55 KEVGTVSMEWLAGEKTKVVGTFPPRKPRGWTGYVEKDTAGQTNVYSIEPAVYVAESAISS 114

Query:   121 XXXXXXXXXXENTIXXXXXXXXXXXXXXXXXXXQVGKNPPPM-QTIDYNGPSLSYYINKF 179
                       ENT                    QVGK+ P   + +DY+GPSLSYYINKF
Sbjct:   115 GTAGSSADGAENTAAIVAGIALIAVAAASSILLQVGKDAPTRPKAVDYSGPSLSYYINKF 174

Query:   180 KPPAFXXXXXXXXXXXXXXXXXXTSAQEVPQIQIQSESNPE 220
             KP                     TS  E P +  Q  S PE
Sbjct:   175 KPSEIVQPSTPSVTEAPPVAELETSLPETPSVAQQETSLPE 215


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.311   0.128   0.377    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      227       175   0.00078  109 3  11 23  0.49    32
                                                     31  0.49    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  587 (62 KB)
  Total size of DFA:  162 KB (2096 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.51u 0.11s 15.62t   Elapsed:  00:00:01
  Total cpu time:  15.51u 0.11s 15.62t   Elapsed:  00:00:01
  Start:  Fri May 10 02:04:36 2013   End:  Fri May 10 02:04:37 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0034660 "ncRNA metabolic process" evidence=RCA

GO:0042793 "transcription from plastid promoter" evidence=RCA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT5G07020	proline-rich family protein; proline-rich family protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; Has 32 Blast hits to 32 proteins in 15 species- Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 1; Plants - 28; Viruses - 1; Other Eukaryotes - 1 (source- NCBI BLink). (235 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	SBPASE	SBPASE (sedoheptulose-bisphosphatase); phosphoric ester hydrolase/ sedoheptulose-bisphosphatase [...] (393 aa)				•					0.921
	ATPRX_Q	ATPRX Q; antioxidant/ peroxiredoxin; encodes periredoxin Q which decomposes peroxides and plays [...] (216 aa)				•					0.921
	CRB	CRB (CHLOROPLAST RNA BINDING); binding / catalytic/ coenzyme binding; Encodes CHLOROPLAST RNA B [...] (378 aa)				•					0.919
	AT1G55480	binding / protein binding; binding / protein binding; FUNCTIONS IN- protein binding, binding; L [...] (335 aa)				•					0.917
	AT3G61870	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (272 aa)				•					0.917
	AT1G74730	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (198 aa)				•					0.917
	AT1G32550	ferredoxin family protein; ferredoxin family protein; FUNCTIONS IN- electron carrier activity, [...] (194 aa)				•					0.917
	AT2G43560	immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein; immunophilin / FKB [...] (223 aa)				•					0.915
	AT1G71500	Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain-containing protein; FUNCTIONS [...] (287 aa)				•					0.915
	PSB28	PSB28 (PHOTOSYSTEM II REACTION CENTER PSB28 PROTEIN); Similar to PsbW subunit of photosystem II [...] (183 aa)				•					0.915

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00