Citrus Sinensis ID: 027197

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220------
Protein Sequence
MDYYILKLVVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWRCPVCPLASNSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEKSGSELVAALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSARNPIIIKAMALGLQLVSAFWFFKIARMVKYKLAKWTSKKAA
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHEEEEEEEEEcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccHEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MDYYILKLVVVAVVSWTAAFLFIRkifpnrsfdfcNRLVSTTHAALAVTLTSlsvqdwrcpvcplasnssplqMQTLAWTLAYLIYDLVCCLFdqrvnvdnTIHHLISIVGIGAGLVYEKSGSELVAALWITEISSPFLHCREMLKElgyrdtglnltaDVTFAAIFTFARMVCGPYLAYLTLSARNPIIIKAMALGLQLVSAFWFFKIARMVKYKLAKWTSKKAA
Flexible Loop (DISEMBL)
MDYYILKLVVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWRCPVCPLASNSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEKSGSELVAALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSARNPIIIKAMALGLQLVSAFWFFKIARMVKYKLAkwtskkaa
Low Complexity Region (SEG)
MDYYILKLVVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWRCPVCPLASNSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEKSGSELVAALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSARNPIIIKAMALGLQLVSAFWFFKIARMVKYKLAKWTSKKAA
Disordered region (IsUnstruct)
**YYILKLVVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWRCPVCPLASNSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEKSGSELVAALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSARNPIIIKAMALGLQLVSAFWFFKIARMVKYKLAKW******
Disordered Region (DISOPRED)
MDYYILKLVVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWRCPVCPLASNSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEKSGSELVAALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSARNPIIIKAMALGLQLVSAFWFFKIARMVKY****W******
Disordered Region (DISEMBL)
MDYYILKLVVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWRCPVCPLASNSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEKSGSELVAALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSARNPIIIKAMALGLQLVSAFWFFKIARMVKYKL*********
Disordered Region (DISPRO)
MDYYILKLVVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWRCPVCPLASNSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEKSGSELVAALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSARNPIIIKAMALGLQLVSAFWFFKIARMVKYKLAKWTSK***
Transmembrane Helix (TMHMM)
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDYYILKLVVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWRCPVCPLASNSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEKSGSELVAALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSARNPIIIKAMALGLQLVSAFWFFKIARMVKYKLAKWTSKKAA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	226	2.2.26 [Sep-21-2011]
Q6ZRR5	245	Transmembrane protein 136	yes	no	0.960	0.885	0.295	4e-20
Q0VD42	245	Transmembrane protein 136	yes	no	0.907	0.836	0.299	1e-18
Q3TYE7	245	Transmembrane protein 136	yes	no	0.862	0.795	0.305	3e-18
Q1LXV8	242	Transmembrane protein 136	no	no	0.876	0.818	0.269	1e-12
Q5XIY2	264	Transmembrane protein 56-	no	no	0.792	0.678	0.278	0.0004

>sp|Q6ZRR5|TM136_HUMAN Transmembrane protein 136 OS=Homo sapiens GN=TMEM136 PE=2 SV=2

 Score = 98.2 bits (243), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 114/223 (51%), Gaps = 6/223 (2%)

Query: 9   VVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTS-LSVQDWRCPVCPLAS 67
           V+ ++  W + ++    +  +RS+++  RLV+ TH  L++ L++ +   D   P     S
Sbjct: 9   VLCSLCGWLSLYISFCHLNKHRSYEWSCRLVTFTHGVLSIGLSAYIGFIDGPWPFTHPGS 68

Query: 68  NSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEKSGSELVA 127
            ++PLQ+  L  TL Y I+DL  C++ Q        HH +SI+GI   LV  +SG+E+ A
Sbjct: 69  PNTPLQVHVLCLTLGYFIFDLGWCVYFQSEGALMLAHHTLSILGIIMALVLGESGTEVNA 128

Query: 128 ALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSARN 187
            L+ +E+++P L  R  L+E G+  +      D  F A+FT  R+  G  L +  + +  
Sbjct: 129 VLFGSELTNPLLQMRWFLRETGHYHSFTGDVVDFLFVALFTGVRIGVGACLLFCEMVSPT 188

Query: 188 P-IIIKAMALGLQLVSAFWFFKIARMVKYKLAK----WTSKKA 225
           P   +KA  + +  VS  + F I R    K  K    W S+++
Sbjct: 189 PKWFVKAGGVAMYAVSWCFMFSIWRFAWRKSIKKYHAWRSRRS 231

Homo sapiens (taxid: 9606)

>sp|Q0VD42|TM136_BOVIN Transmembrane protein 136 OS=Bos taurus GN=TMEM136 PE=2 SV=1

 Score = 93.6 bits (231), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 2/207 (0%)

Query: 15  SWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTS-LSVQDWRCPVCPLASNSSPLQ 73
            W + ++   ++  +RS+++  RLV+ TH  L++ L++ +   D   P     S ++PLQ
Sbjct: 15  GWLSLYVSFCRLNKHRSYEWNCRLVTFTHGILSIGLSAYIGFIDGPWPFTHPGSPNTPLQ 74

Query: 74  MQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEKSGSELVAALWITE 133
           +  L  TL Y I+DL  C++ +        HH +SI+GI   LV  +SG+E+ A L+ +E
Sbjct: 75  VHVLCLTLGYFIFDLGWCIYFRSEGPLMLAHHTLSILGIIVALVLGESGTEVNAVLFGSE 134

Query: 134 ISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSARNP-IIIK 192
           I++P L  R  L+E G+  +      D  F A+FT  R+  G  L +  + +  P   +K
Sbjct: 135 ITNPLLQIRWFLRETGHYHSFTGDVVDFLFVALFTGVRIGVGACLLFCEMVSPTPKWFVK 194

Query: 193 AMALGLQLVSAFWFFKIARMVKYKLAK 219
              + + +VS  + F I R    K  K
Sbjct: 195 VGGVAMYVVSWCFMFSIWRFAWRKSIK 221

Bos taurus (taxid: 9913)

>sp|Q3TYE7|TM136_MOUSE Transmembrane protein 136 OS=Mus musculus GN=Tmem136 PE=2 SV=1

 Score = 92.0 bits (227), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 8/203 (3%)

Query: 29  NRSFDFCNRLVSTTHAALAVTLTS-LSVQDWRCPVCPLASNSSPLQMQTLAWTLAYLIYD 87
           +RS ++  RLV+ TH  L++ L++ +   D   P     S ++PLQ+  L  TL Y I+D
Sbjct: 29  HRSCEWSCRLVTFTHGVLSIGLSAYIGFIDGPWPFTHPGSPNTPLQVHVLCLTLGYFIFD 88

Query: 88  LVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEKSGSELVAALWITEISSPFLHCREMLKE 147
           L  C++ Q        HH +SI+GI   L   +SG+E+ A L+ +EI++P L  R  L+E
Sbjct: 89  LGWCIYFQSEGPLMLAHHTLSILGIIMALALGESGTEVNAVLFGSEITNPLLQMRWFLRE 148

Query: 148 LGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSARNPI-IIKAMALGLQLVS---- 202
            G+  +      D  F A+FT  R+  G +L +  + +  P   +K   + +  VS    
Sbjct: 149 TGHYHSFTGDVVDFLFVALFTGVRIGVGAHLLFCEMVSPTPKWFVKVGGVAMYAVSWCFM 208

Query: 203 -AFWFFKIARMVKYKLAKWTSKK 224
            + W F   + +K K   W S++
Sbjct: 209 VSIWRFAWKKSIK-KYHAWRSRR 230

Mus musculus (taxid: 10090)

>sp|Q1LXV8|TM136_DANRE Transmembrane protein 136 OS=Danio rerio GN=tmem136 PE=2 SV=1

 Score = 73.2 bits (178), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 6/204 (2%)

Query: 12  AVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTS---LSVQDWRCPVCPLASN 68
           +++SW   +L +  +   R  ++  RLV+  H  L + LT+        W  P     + 
Sbjct: 11  SLISWLFLYLLLCHLNSGRDSEWNCRLVTLFHGILIICLTAYIGFIAGPW--PFTHPGTE 68

Query: 69  SSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEKSGSELVAA 128
           ++  Q+ TL  +L Y ++D+  C++ +        HH +SI GI   L   +SG E  A 
Sbjct: 69  NTYFQILTLVLSLGYFLFDMAWCVYFRTEGPVMLAHHTMSIFGILLALGLGESGIETCAV 128

Query: 129 LWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSARNP 188
           L+ +EI++P L  R  LK +G  D+      D+ F  +F   R+  G  + Y  L++  P
Sbjct: 129 LFGSEITNPLLQARWFLKRMGCYDSLAGDVVDLLFILLFASVRIGVGSRMLYCELTSPKP 188

Query: 189 -IIIKAMALGLQLVSAFWFFKIAR 211
            +I+K   + +  +S  +   IAR
Sbjct: 189 SLIVKVGGVAIYTLSWIFMVDIAR 212

Danio rerio (taxid: 7955)

>sp|Q5XIY2|TM56B_DANRE Transmembrane protein 56-B OS=Danio rerio GN=tmem56b PE=2 SV=1

 Score = 45.1 bits (105), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 29/208 (13%)

Query: 25  KIFPNRSFDFCNRLVSTTHAALAVTLTSLSV--QDWRCPVCPLASNSSPLQMQTLAWTLA 82
           K+ PN+  D+ +RLVST H AL V L  L +   D      P+  + + +++  +A T  
Sbjct: 37  KLPPNKLNDWNSRLVSTVH-ALIVGLFCLYILWYDDAVNEDPVWGDPNLVKLN-VAITCG 94

Query: 83  YLIYD--LVCCLFDQRVNVDNTIHHLISIVGIG----AGLVYEKSGSELVAALWITEISS 136
           YL YD  L+ C +    +V    HHL ++   G     G++   +   L     I+E+S+
Sbjct: 95  YLFYDLLLLACNWSTMGDVFFVCHHLAALYAYGYVLTRGVLPYFANFRL-----ISELST 149

Query: 137 PFLHCREMLKELGY-RDTGLNLTADVTFAAIFTFARM-VCGPYLAYLTLSARNPIIIKAM 194
           PF++ R   + L Y R   L +   +  A +F   R+ V  PY A +     +P   K +
Sbjct: 150 PFVNQRWFFEALAYPRTHQLVVANGIAMAVVFFLVRIAVMPPYWAKVFGIIYSPTFEK-L 208

Query: 195 ALGLQ-----------LVSAFWFFKIAR 211
            L +Q           +++  W +KIAR
Sbjct: 209 GLAIQVAWIISCVCLDILNIIWMYKIAR 236

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	226
225458175	231	PREDICTED: transmembrane protein 136 [Vi	0.995	0.974	0.752	5e-97
356551918	250	PREDICTED: uncharacterized protein LOC10	0.991	0.896	0.714	4e-93
356564310	242	PREDICTED: uncharacterized protein LOC10	0.991	0.925	0.705	9e-93
255538748	233	conserved hypothetical protein [Ricinus	0.991	0.961	0.705	2e-92
388516813	244	unknown [Lotus japonicus]	0.982	0.909	0.711	5e-92
255634753	217	unknown [Glycine max]	0.938	0.976	0.716	7e-89
224082916	222	predicted protein [Populus trichocarpa]	0.969	0.986	0.703	2e-88
449515752	233	PREDICTED: uncharacterized LOC101213712	0.995	0.965	0.654	1e-85
449469953	233	PREDICTED: uncharacterized protein LOC10	0.995	0.965	0.650	3e-85
357438093	259	Transmembrane protein [Medicago truncatu	0.982	0.857	0.630	9e-85

>gi|225458175|ref|XP_002281067.1| PREDICTED: transmembrane protein 136 [Vitis vinifera] gi|302142550|emb|CBI19753.3| unnamed protein product [Vitis vinifera]

 Score =  359 bits (922), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 170/226 (75%), Positives = 194/226 (85%), Gaps = 1/226 (0%)

Query: 1   MDYYILKLVVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWRC 60
           M+ YI+KLVV  V+SW + F+ IR++FP RSF FCNRLVST HA LAVTL+SL+V+DWRC
Sbjct: 1   MEDYIVKLVVSGVISWASTFMVIRRMFPKRSFGFCNRLVSTIHATLAVTLSSLTVEDWRC 60

Query: 61  PVCPLASNSSPLQMQTLAWTLAYLIYDLVCCLF-DQRVNVDNTIHHLISIVGIGAGLVYE 119
           PVCPLAS SSP QMQTLA TLAYLIYDL+CCL  D+RVN+DN+IHHL+SIVGIGAGL YE
Sbjct: 61  PVCPLASKSSPKQMQTLAVTLAYLIYDLICCLLEDKRVNLDNSIHHLVSIVGIGAGLFYE 120

Query: 120 KSGSELVAALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLA 179
             GSE+VA+LWITEISSPFLH RE+LKELGYRDT LNL  D+ FA IFT ARM+CGP L 
Sbjct: 121 MCGSEMVASLWITEISSPFLHLRELLKELGYRDTDLNLIVDMLFAIIFTIARMICGPCLV 180

Query: 180 YLTLSARNPIIIKAMALGLQLVSAFWFFKIARMVKYKLAKWTSKKA 225
           Y+TLSA NP++IKAMALGLQLVSAFWFFKIARMVKYK+ K T  KA
Sbjct: 181 YVTLSASNPLLIKAMALGLQLVSAFWFFKIARMVKYKMTKRTKSKA 226

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356551918|ref|XP_003544319.1| PREDICTED: uncharacterized protein LOC100789395 [Glycine max]

 Score =  346 bits (888), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 160/224 (71%), Positives = 190/224 (84%)

Query: 1   MDYYILKLVVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWRC 60
           M+ Y++K +VV VVSWT+AF+ +R+IFP RSFDFCNR+VST HA LAVTL  LSV+DWRC
Sbjct: 1   MEDYVIKTIVVGVVSWTSAFVLVRRIFPKRSFDFCNRVVSTLHATLAVTLAWLSVKDWRC 60

Query: 61  PVCPLASNSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEK 120
           P+CP+ S SSP QMQ LA +L+YLIYDL CC  D+RVN+DNT+HHL+SIVGIGAGL ++K
Sbjct: 61  PICPVGSKSSPKQMQVLAVSLSYLIYDLACCQLDERVNLDNTVHHLVSIVGIGAGLSHQK 120

Query: 121 SGSELVAALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAY 180
            GSE+VA +WITEISSPFLH RE+LKELGYRDT LNL AD+ FAAIFTFARMV GP L Y
Sbjct: 121 CGSEMVATIWITEISSPFLHLRELLKELGYRDTLLNLAADILFAAIFTFARMVVGPCLTY 180

Query: 181 LTLSARNPIIIKAMALGLQLVSAFWFFKIARMVKYKLAKWTSKK 224
           +TLSA  P++IKAM LGLQLVSAFWFFKI RM+K+KL K T+ K
Sbjct: 181 VTLSANYPLLIKAMGLGLQLVSAFWFFKIVRMMKHKLTKRTTSK 224

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564310|ref|XP_003550398.1| PREDICTED: uncharacterized protein LOC100801989 [Glycine max]

 Score =  345 bits (885), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 158/224 (70%), Positives = 190/224 (84%)

Query: 1   MDYYILKLVVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWRC 60
           M+ Y+++ +VV VVSWT+AF+ +R+IFP RSFDFCNR+VST HA LAVTL  LSV+DW+C
Sbjct: 1   MEDYVIRTIVVGVVSWTSAFVLVRRIFPKRSFDFCNRVVSTLHATLAVTLAWLSVEDWKC 60

Query: 61  PVCPLASNSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEK 120
           P+CP+ S SSP QMQ LA +L+YLIYDL CC  D+RVN+DNT+HHL+SIVGIGAGL Y+K
Sbjct: 61  PICPVGSKSSPKQMQVLAVSLSYLIYDLACCQLDERVNLDNTVHHLVSIVGIGAGLSYQK 120

Query: 121 SGSELVAALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAY 180
            GSE+VA +WITEISSPFLH RE+LKELGYRDT LNL AD+ FAAIFTFARMV GP + Y
Sbjct: 121 CGSEMVATIWITEISSPFLHLRELLKELGYRDTLLNLAADILFAAIFTFARMVVGPCITY 180

Query: 181 LTLSARNPIIIKAMALGLQLVSAFWFFKIARMVKYKLAKWTSKK 224
           +TLSA  P++IKAM LGLQLVSAFWFFKI RM+K+KL K T+ K
Sbjct: 181 VTLSANYPLLIKAMGLGLQLVSAFWFFKIVRMMKHKLTKRTTSK 224

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538748|ref|XP_002510439.1| conserved hypothetical protein [Ricinus communis] gi|223551140|gb|EEF52626.1| conserved hypothetical protein [Ricinus communis]

 Score =  344 bits (882), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 158/224 (70%), Positives = 190/224 (84%)

Query: 1   MDYYILKLVVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWRC 60
           M+ YIL ++++ V+SW   FL IRK+ P+RSF+FCNRLVST HA +AVTL S+SV+DWRC
Sbjct: 1   MEKYILNIIILGVISWGTIFLLIRKVVPSRSFEFCNRLVSTIHAIVAVTLASISVEDWRC 60

Query: 61  PVCPLASNSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEK 120
           PV PLAS  +P QM  LA T++YLIYDL+CCLFD R N+DNTIHHL+SIVG+GAGLVY K
Sbjct: 61  PVRPLASECTPSQMIALAVTVSYLIYDLLCCLFDTRPNLDNTIHHLVSIVGLGAGLVYHK 120

Query: 121 SGSELVAALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAY 180
           SG+ELVAALWITEISSPFLH RE+LKELGYR+T LNL AD++FA +F+  RMV GPYLAY
Sbjct: 121 SGTELVAALWITEISSPFLHLRELLKELGYRNTNLNLAADISFAVVFSVGRMVVGPYLAY 180

Query: 181 LTLSARNPIIIKAMALGLQLVSAFWFFKIARMVKYKLAKWTSKK 224
            TL+A NPIII+AMA+GLQ+VSAFWF+KI RMVKYKLA  T+ K
Sbjct: 181 ATLTANNPIIIQAMAVGLQMVSAFWFYKIVRMVKYKLATRTTSK 224

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388516813|gb|AFK46468.1| unknown [Lotus japonicus]

 Score =  342 bits (878), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 158/222 (71%), Positives = 189/222 (85%)

Query: 1   MDYYILKLVVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWRC 60
           M+ YI K++VV VVSWT AF+ +R+IFP R+FDF NR+VST HA LAVTL SLSV+DW+C
Sbjct: 1   MEDYITKIIVVGVVSWTTAFVLVRRIFPKRTFDFSNRIVSTIHATLAVTLASLSVEDWKC 60

Query: 61  PVCPLASNSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEK 120
           P+CP+AS SS  +MQ LA +L+YLIYDLVCCLFD R N+DNTIHHL+SIVGIGAGL Y+K
Sbjct: 61  PICPVASKSSHPKMQVLAVSLSYLIYDLVCCLFDGRANMDNTIHHLVSIVGIGAGLYYQK 120

Query: 121 SGSELVAALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAY 180
            GSE+VAALW+TE+SSPFLH RE+LKELGYRDT LN TAD+ FAAIFTFARM+ GP L Y
Sbjct: 121 CGSEMVAALWVTEMSSPFLHLRELLKELGYRDTLLNFTADILFAAIFTFARMMAGPCLTY 180

Query: 181 LTLSARNPIIIKAMALGLQLVSAFWFFKIARMVKYKLAKWTS 222
           +TLSA NP +IKAM LGLQLVS FWFFKI R++K+KL K ++
Sbjct: 181 VTLSANNPFLIKAMGLGLQLVSTFWFFKIVRIMKHKLTKRST 222

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255634753|gb|ACU17738.1| unknown [Glycine max]

 Score =  332 bits (851), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 152/212 (71%), Positives = 181/212 (85%)

Query: 1   MDYYILKLVVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWRC 60
           M+ Y+++ +VV VVSWT+AF+ +R+IFP RSFDFCNR+VST HA LAVTL  LSV+DW+C
Sbjct: 1   MEDYVIRTIVVGVVSWTSAFVLVRRIFPKRSFDFCNRVVSTLHATLAVTLAWLSVEDWKC 60

Query: 61  PVCPLASNSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEK 120
           P+CP+ S SSP QMQ LA +L+YLIYDL CC  D+RVN+DNT+HHL+SIVGIGAGL Y+K
Sbjct: 61  PICPVGSKSSPKQMQVLAVSLSYLIYDLACCQLDERVNLDNTVHHLVSIVGIGAGLSYQK 120

Query: 121 SGSELVAALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAY 180
            GSE+VA +WITEISSPFLH RE+LKELGYRDT LNL AD+ FAAIFTFARMV GP + Y
Sbjct: 121 CGSEMVATIWITEISSPFLHLRELLKELGYRDTFLNLAADILFAAIFTFARMVVGPCITY 180

Query: 181 LTLSARNPIIIKAMALGLQLVSAFWFFKIARM 212
           +TLSA  P++IKAM LGLQLVSAFWFFKI RM
Sbjct: 181 VTLSANYPLLIKAMGLGLQLVSAFWFFKIVRM 212

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082916|ref|XP_002306890.1| predicted protein [Populus trichocarpa] gi|222856339|gb|EEE93886.1| predicted protein [Populus trichocarpa]

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 154/219 (70%), Positives = 182/219 (83%)

Query: 1   MDYYILKLVVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWRC 60
           M+  IL+++ + ++SWT AF   RK  P RSF+FCNRLVST HA LA TL SLSV+DW C
Sbjct: 3   MEERILRIITLGIISWTTAFHLFRKFLPKRSFEFCNRLVSTVHATLAFTLASLSVEDWTC 62

Query: 61  PVCPLASNSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEK 120
           PVCPLAS  SP QMQ LA +L+YLIYDL+CC FD+RV +DNTIHHL+SIVGI AGL Y K
Sbjct: 63  PVCPLASRPSPSQMQALAVSLSYLIYDLICCQFDKRVTIDNTIHHLVSIVGIAAGLAYGK 122

Query: 121 SGSELVAALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAY 180
            GSEL+AAL ITEISSPFLH RE+LKELGYRDT LNL AD+ FA +F+FARMV GPYLA+
Sbjct: 123 CGSELIAALCITEISSPFLHLRELLKELGYRDTDLNLAADILFAVVFSFARMVFGPYLAW 182

Query: 181 LTLSARNPIIIKAMALGLQLVSAFWFFKIARMVKYKLAK 219
           +TL+A NP++IKAMA+GLQLVSA+WFFKIA M+KYKL K
Sbjct: 183 VTLTADNPLVIKAMAVGLQLVSAYWFFKIAGMMKYKLTK 221

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449515752|ref|XP_004164912.1| PREDICTED: uncharacterized LOC101213712 isoform 1 [Cucumis sativus]

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 148/226 (65%), Positives = 187/226 (82%), Gaps = 1/226 (0%)

Query: 2   DYYILKLVVVAVVSWTAAFLFIRK-IFPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWRC 60
           D  ++ ++V  V+SWT  F+ +RK +FPNRSF+FCNRL+ST HA LAVTL S+SVQ+WRC
Sbjct: 8   DPDVINVMVYGVISWTLGFILLRKAVFPNRSFEFCNRLISTIHAFLAVTLASISVQNWRC 67

Query: 61  PVCPLASNSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEK 120
           P+CPLAS SS  QMQTL+ + +YLIYD+VCC FD++V++DNTIHHL+SIVGI AGL Y+K
Sbjct: 68  PICPLASKSSSFQMQTLSVSCSYLIYDMVCCHFDKKVSLDNTIHHLVSIVGIAAGLAYQK 127

Query: 121 SGSELVAALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAY 180
            GSE+VAALWITEISSPFLH RE+LKE+GY+ T LNL AD+ FA IF+FARMV GPYL Y
Sbjct: 128 CGSEMVAALWITEISSPFLHLREILKEIGYKGTDLNLAADIGFAVIFSFARMVGGPYLTY 187

Query: 181 LTLSARNPIIIKAMALGLQLVSAFWFFKIARMVKYKLAKWTSKKAA 226
           +TL A  P +IKAMALGLQLVSA+WF+KI RM+++KL   ++ K +
Sbjct: 188 VTLFANVPFLIKAMALGLQLVSAYWFYKIVRMIRFKLNNRSTLKKS 233

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469953|ref|XP_004152683.1| PREDICTED: uncharacterized protein LOC101213712 isoform 1 [Cucumis sativus]

 Score =  320 bits (819), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 147/226 (65%), Positives = 187/226 (82%), Gaps = 1/226 (0%)

Query: 2   DYYILKLVVVAVVSWTAAFLFIRK-IFPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWRC 60
           D  ++ ++V  V++WT  F+ +RK +FPNRSF+FCNRL+ST HA LAVTL S+SVQ+WRC
Sbjct: 8   DPDVINVMVYGVIAWTLGFILLRKAVFPNRSFEFCNRLISTIHAFLAVTLASISVQNWRC 67

Query: 61  PVCPLASNSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEK 120
           P+CPLAS SS  QMQTL+ + +YLIYD+VCC FD++V++DNTIHHL+SIVGI AGL Y+K
Sbjct: 68  PICPLASKSSSFQMQTLSVSCSYLIYDMVCCHFDKKVSLDNTIHHLVSIVGIAAGLAYQK 127

Query: 121 SGSELVAALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAY 180
            GSE+VAALWITEISSPFLH RE+LKE+GY+ T LNL AD+ FA IF+FARMV GPYL Y
Sbjct: 128 CGSEMVAALWITEISSPFLHLREILKEIGYKGTDLNLAADIGFAVIFSFARMVGGPYLTY 187

Query: 181 LTLSARNPIIIKAMALGLQLVSAFWFFKIARMVKYKLAKWTSKKAA 226
           +TL A  P +IKAMALGLQLVSA+WF+KI RM+++KL   ++ K +
Sbjct: 188 VTLFANVPFLIKAMALGLQLVSAYWFYKIVRMIRFKLNNRSTLKKS 233

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357438093|ref|XP_003589322.1| Transmembrane protein [Medicago truncatula] gi|358348470|ref|XP_003638269.1| Transmembrane protein [Medicago truncatula] gi|355478370|gb|AES59573.1| Transmembrane protein [Medicago truncatula] gi|355504204|gb|AES85407.1| Transmembrane protein [Medicago truncatula]

 Score =  318 bits (815), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 152/241 (63%), Positives = 186/241 (77%), Gaps = 19/241 (7%)

Query: 1   MDYYILKLVVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWRC 60
           M+ YI K +VV V SWT  FL +RKIFP RSFDF NR+VST HA LAVTL +LSVQDW+C
Sbjct: 1   MEEYIQKTIVVGVFSWTTTFLVMRKIFPKRSFDFSNRIVSTIHAILAVTLATLSVQDWKC 60

Query: 61  PVCPLASNSSPLQ-------------------MQTLAWTLAYLIYDLVCCLFDQRVNVDN 101
           P+CP+AS+SS  Q                   M+ LA +L+YLIYDLVCCLFD++ N DN
Sbjct: 61  PICPVASDSSYKQDISFLLNWCELFICLKFDQMEVLAVSLSYLIYDLVCCLFDEKFNWDN 120

Query: 102 TIHHLISIVGIGAGLVYEKSGSELVAALWITEISSPFLHCREMLKELGYRDTGLNLTADV 161
           TIHHL+SIVG+ AGL Y+K GSE+V A+W+TE+SSPFLH RE+LKELGY+DT LNLTAD+
Sbjct: 121 TIHHLVSIVGLIAGLCYQKCGSEMVGAVWVTEMSSPFLHLRELLKELGYKDTPLNLTADI 180

Query: 162 TFAAIFTFARMVCGPYLAYLTLSARNPIIIKAMALGLQLVSAFWFFKIARMVKYKLAKWT 221
            FA+IFTFARM+ GP + Y+TL++ NP +IKAM LGLQLVS FWF+KI RM+KYKL K +
Sbjct: 181 LFASIFTFARMMIGPCITYVTLTSNNPFLIKAMGLGLQLVSTFWFYKIVRMMKYKLTKKS 240

Query: 222 S 222
           S
Sbjct: 241 S 241

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	226
TAIR|locus:2203256	231	AT1G35180 "AT1G35180" [Arabido	0.982	0.961	0.620	2.7e-75
TAIR|locus:2028220	231	AT1G45010 "AT1G45010" [Arabido	0.946	0.926	0.621	6.7e-72
TAIR|locus:2203272	229	AT1G35170 "AT1G35170" [Arabido	0.969	0.956	0.582	8e-69
UNIPROTKB|Q6ZRR5	245	TMEM136 "Transmembrane protein	0.960	0.885	0.295	2.4e-21
UNIPROTKB|E2QSX2	245	TMEM136 "Uncharacterized prote	0.951	0.877	0.298	1e-20
UNIPROTKB|F6UPA7	266	TMEM136 "Uncharacterized prote	0.951	0.808	0.298	1e-20
RGD|1565079	245	Tmem136 "transmembrane protein	0.951	0.877	0.291	4.4e-20
UNIPROTKB|E1C635	242	TMEM136 "Uncharacterized prote	0.933	0.871	0.295	5.7e-20
UNIPROTKB|F1NUQ1	245	TMEM136 "Uncharacterized prote	0.933	0.861	0.295	5.7e-20
UNIPROTKB|Q0VD42	245	TMEM136 "Transmembrane protein	0.920	0.848	0.299	5.7e-20

TAIR|locus:2203256 AT1G35180 "AT1G35180" [Arabidopsis thaliana (taxid:3702)]

 Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
 Identities = 139/224 (62%), Positives = 180/224 (80%)

Query:     5 ILKLVVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWRCPVCP 64
             ++ +  + V+SW   F+ +R+IF + SFDF  R+VST HA +AVTL +LS+QDW CPVCP
Sbjct:     8 VISITTIGVISWGLIFILVRRIFSSYSFDFSTRIVSTLHATIAVTLATLSIQDWSCPVCP 67

Query:    65 LASNSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEKSGSE 124
             +AS SS  QM+TLA++L+Y+IYDL+C  FDQ +++DN +HH + I+G  AGL Y+K GSE
Sbjct:    68 IASTSSLRQMETLAFSLSYMIYDLICSHFDQVLSIDNAVHHSVCILGFVAGLFYQKCGSE 127

Query:   125 LVAALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLS 184
             +VAALWITEISSPFLH RE+LKE+GYRDT LNL ADV FA IF+ ARMV GPYL Y+T+S
Sbjct:   128 MVAALWITEISSPFLHLREILKEIGYRDTDLNLAADVCFATIFSLARMVGGPYLVYVTIS 187

Query:   185 ARNPIIIKAMALGLQLVSAFWFFKIARMVKYKLAK--WTSKKAA 226
             A NPI+IKAMALGLQLVSAFWF+KI +M++YK  K   ++KK+A
Sbjct:   188 ADNPILIKAMALGLQLVSAFWFYKILKMMRYKFIKRSMSNKKSA 231

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2028220 AT1G45010 "AT1G45010" [Arabidopsis thaliana (taxid:3702)]

 Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
 Identities = 133/214 (62%), Positives = 167/214 (78%)

Query:     6 LKLVVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWRCPVCPL 65
             +K++V  V+SW  AF+  R+IF + SF F NRL+ST HA +AVTL +LSVQD  CPVCPL
Sbjct:     9 IKIIVFGVISWGVAFILTRRIFSSYSFSFSNRLLSTAHATIAVTLATLSVQDLSCPVCPL 68

Query:    66 ASNSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEKSGSEL 125
             AS  S  QM  +A++L+Y+IYDL+CC FDQ  ++DN +HH +SI+G  AGL Y+KSGSE+
Sbjct:    69 ASKPSHKQMDVMAFSLSYMIYDLICCHFDQVFSIDNAVHHFVSILGFIAGLAYQKSGSEI 128

Query:   126 VAALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSA 185
             VA LW+ EISSPF H RE+LKE+GY+DT LNL ADV FA IFT AR+VCGP+L Y++LSA
Sbjct:   129 VATLWVAEISSPFFHLREILKEIGYKDTKLNLAADVCFATIFTLARIVCGPFLVYVSLSA 188

Query:   186 RNPIIIKAMALGLQLVSAFWFFKIARMVKYKLAK 219
              NPI IKAM  GLQLVS FWF+KI  M++YKL K
Sbjct:   189 DNPIFIKAMGSGLQLVSIFWFYKIFGMMRYKLFK 222

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2203272 AT1G35170 "AT1G35170" [Arabidopsis thaliana (taxid:3702)]

 Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
 Identities = 130/223 (58%), Positives = 173/223 (77%)

Query:     5 ILKLVVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWRCPVCP 64
             I+ +  + ++SW   F+ +R+IF + SFDF  R+VST HA +AVTL +LS+QDW CPVCP
Sbjct:     8 IISITTIRIISWGLIFILVRRIFSSYSFDFSTRIVSTLHATIAVTLATLSIQDWSCPVCP 67

Query:    65 LASNSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEKSGSE 124
             +AS SS  QM+TLA++L+Y+IYDL+C  FDQ +++DN +HH + I+G  AGL Y+K GSE
Sbjct:    68 IASTSSLRQMETLAFSLSYMIYDLICSHFDQVLSIDNAVHHSVCILGFVAGLFYQKCGSE 127

Query:   125 LVAALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLS 184
             +VAA+WITEISSPFLH RE+LKE+G RDT LNL ADV FA IF+ ARMV GPYL Y+T+ 
Sbjct:   128 MVAAIWITEISSPFLHLREILKEIGCRDTDLNLAADVFFATIFSVARMVGGPYLVYVTIP 187

Query:   185 ARNPIIIKAMALGLQLVSAFWFFKIARMVKYKLAK--WTSKKA 225
             A NPI+IK M LGLQLVSAF  +K+ +M++YK  K   ++KK+
Sbjct:   188 ADNPILIKVMGLGLQLVSAF--YKLLKMMRYKFIKRSMSTKKS 228

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q6ZRR5 TMEM136 "Transmembrane protein 136" [Homo sapiens (taxid:9606)]

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 66/223 (29%), Positives = 114/223 (51%)

Query:     9 VVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTS-LSVQDWRCPVCPLAS 67
             V+ ++  W + ++    +  +RS+++  RLV+ TH  L++ L++ +   D   P     S
Sbjct:     9 VLCSLCGWLSLYISFCHLNKHRSYEWSCRLVTFTHGVLSIGLSAYIGFIDGPWPFTHPGS 68

Query:    68 NSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEKSGSELVA 127
              ++PLQ+  L  TL Y I+DL  C++ Q        HH +SI+GI   LV  +SG+E+ A
Sbjct:    69 PNTPLQVHVLCLTLGYFIFDLGWCVYFQSEGALMLAHHTLSILGIIMALVLGESGTEVNA 128

Query:   128 ALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSARN 187
              L+ +E+++P L  R  L+E G+  +      D  F A+FT  R+  G  L +  + +  
Sbjct:   129 VLFGSELTNPLLQMRWFLRETGHYHSFTGDVVDFLFVALFTGVRIGVGACLLFCEMVSPT 188

Query:   188 PI-IIKAMALGLQLVSAFWFFKIARMVKYKLAK----WTSKKA 225
             P   +KA  + +  VS  + F I R    K  K    W S+++
Sbjct:   189 PKWFVKAGGVAMYAVSWCFMFSIWRFAWRKSIKKYHAWRSRRS 231

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E2QSX2 TMEM136 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 66/221 (29%), Positives = 112/221 (50%)

Query:     9 VVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTS-LSVQDWRCPVCPLAS 67
             V+ ++  W + ++   ++  +RS+++  RLV+ TH  L++ L++ +   D   P     S
Sbjct:     9 VLCSLGGWLSLYISFCRLNKHRSYEWSCRLVTFTHGILSIGLSAYIGFIDGPWPFTHPGS 68

Query:    68 NSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEKSGSELVA 127
              ++PLQ+  L  TL Y I+DL  C++ Q        HH +SI+GI   LV  +SG+E+ A
Sbjct:    69 PNTPLQVHVLCLTLGYFIFDLGWCIYFQSEGALMLAHHTLSILGIIMALVLGESGTEVNA 128

Query:   128 ALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSARN 187
              L+ +EI++P L  R  L+E G+  +      D  F A+FT  R+  G  L +  + +  
Sbjct:   129 VLFGSEITNPLLQMRWFLRETGHYHSFTGDVVDFLFVALFTGVRIGVGARLLFCEMVSPK 188

Query:   188 PI-IIKAMALGLQLVSAFWFFKIARMVKYKLAK----WTSK 223
             P   +K   + +  VS  + F I R    K  K    W S+
Sbjct:   189 PKWFVKFGGVAMYAVSWCFMFSIWRFAWRKSIKKYHAWRSR 229

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F6UPA7 TMEM136 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 66/221 (29%), Positives = 112/221 (50%)

Query:     9 VVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTS-LSVQDWRCPVCPLAS 67
             V+ ++  W + ++   ++  +RS+++  RLV+ TH  L++ L++ +   D   P     S
Sbjct:    30 VLCSLGGWLSLYISFCRLNKHRSYEWSCRLVTFTHGILSIGLSAYIGFIDGPWPFTHPGS 89

Query:    68 NSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEKSGSELVA 127
              ++PLQ+  L  TL Y I+DL  C++ Q        HH +SI+GI   LV  +SG+E+ A
Sbjct:    90 PNTPLQVHVLCLTLGYFIFDLGWCIYFQSEGALMLAHHTLSILGIIMALVLGESGTEVNA 149

Query:   128 ALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSARN 187
              L+ +EI++P L  R  L+E G+  +      D  F A+FT  R+  G  L +  + +  
Sbjct:   150 VLFGSEITNPLLQMRWFLRETGHYHSFTGDVVDFLFVALFTGVRIGVGARLLFCEMVSPK 209

Query:   188 PI-IIKAMALGLQLVSAFWFFKIARMVKYKLAK----WTSK 223
             P   +K   + +  VS  + F I R    K  K    W S+
Sbjct:   210 PKWFVKFGGVAMYAVSWCFMFSIWRFAWRKSIKKYHAWRSR 250

GO:0016021 "integral to membrane" evidence=IEA

RGD|1565079 Tmem136 "transmembrane protein 136" [Rattus norvegicus (taxid:10116)]

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 65/223 (29%), Positives = 112/223 (50%)

Query:     9 VVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTS-LSVQDWRCPVCPLAS 67
             V+ ++  W + +  +  +  +RS ++  RLV+ TH  L++ L++ +   D   P     S
Sbjct:     9 VLCSLGGWLSLYTSLCGLNKHRSCEWSCRLVTFTHGILSIGLSAYIGFIDGPWPFTHPGS 68

Query:    68 NSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEKSGSELVA 127
              ++PLQ+  L  TL Y I+DL  C++ Q        HH +SI+GI   L   +SG+E+ A
Sbjct:    69 PNTPLQVHVLCLTLGYFIFDLGWCIYFQSEGALMLAHHTLSILGIIMALALGESGTEVNA 128

Query:   128 ALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSARN 187
              L+ +EI++P L  R  L+E G+  +      D  F A+FT  R+  G +L +  + +  
Sbjct:   129 VLFGSEITNPLLQMRWFLRETGHYHSFTGDVVDFLFVALFTGVRIGVGAHLLFCEMVSPT 188

Query:   188 PI-IIKAMALGLQLVS-----AFWFFKIARMVKYKLAKWTSKK 224
             P   +K   + +  VS     + W F   + VK K   W S++
Sbjct:   189 PRWFVKVGGVAMYAVSWCFMVSIWRFAWKKSVK-KYHAWRSRR 230

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E1C635 TMEM136 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 63/213 (29%), Positives = 112/213 (52%)

Query:     9 VVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTS-LSVQDWRCPVCPLAS 67
             V+ ++++W   +        +RS ++  RLV+  H A A  L+  +++ D   P+    S
Sbjct:     8 VLGSLLAWLCLYAAFCLWNRHRSPEWNCRLVTLLHGATATCLSGYIALWDGPWPLSHAGS 67

Query:    68 NSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEKSGSELVA 127
              ++ LQ+  L+ TL Y I+DL+ CL+ Q       +HH +SI G+   L   KS +E+ A
Sbjct:    68 PNTALQVHVLSLTLGYFIFDLLWCLYFQTEGDLMLLHHTLSICGMVLVLGLGKSATEVNA 127

Query:   128 ALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSARN 187
              ++++EI++P L  R  L+E+G   + L    D  F  +F   R+  G  + Y  ++A +
Sbjct:   128 VVFVSEITNPLLQTRWFLREMGCYHSFLGEVVDFCFVLLFLVLRIGGGALIMYAMVTAPD 187

Query:   188 PI-IIKAMALGLQLVSAFWFFKIARMVKYKLAK 219
             P  I+K   L + +VS  +  +I R V+ K+ K
Sbjct:   188 PNWILKGGGLAMYIVSLGFMVEICRFVRRKMLK 220

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1NUQ1 TMEM136 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 63/213 (29%), Positives = 112/213 (52%)

Query:     9 VVVAVVSWTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTS-LSVQDWRCPVCPLAS 67
             V+ ++++W   +        +RS ++  RLV+  H A A  L+  +++ D   P+    S
Sbjct:     9 VLGSLLAWLCLYAAFCLWNRHRSPEWNCRLVTLLHGATATCLSGYIALWDGPWPLSHAGS 68

Query:    68 NSSPLQMQTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEKSGSELVA 127
              ++ LQ+  L+ TL Y I+DL+ CL+ Q       +HH +SI G+   L   KS +E+ A
Sbjct:    69 PNTALQVHVLSLTLGYFIFDLLWCLYFQTEGDLMLLHHTLSICGMVLVLGLGKSATEVNA 128

Query:   128 ALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSARN 187
              ++++EI++P L  R  L+E+G   + L    D  F  +F   R+  G  + Y  ++A +
Sbjct:   129 VVFVSEITNPLLQTRWFLREMGCYHSFLGEVVDFCFVLLFLVLRIGGGALIMYAMVTAPD 188

Query:   188 PI-IIKAMALGLQLVSAFWFFKIARMVKYKLAK 219
             P  I+K   L + +VS  +  +I R V+ K+ K
Sbjct:   189 PNWILKGGGLAMYIVSLGFMVEICRFVRRKMLK 221

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q0VD42 TMEM136 "Transmembrane protein 136" [Bos taurus (taxid:9913)]

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 64/214 (29%), Positives = 109/214 (50%)

Query:    16 WTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTS-LSVQDWRCPVCPLASNSSPLQM 74
             W + ++   ++  +RS+++  RLV+ TH  L++ L++ +   D   P     S ++PLQ+
Sbjct:    16 WLSLYVSFCRLNKHRSYEWNCRLVTFTHGILSIGLSAYIGFIDGPWPFTHPGSPNTPLQV 75

Query:    75 QTLAWTLAYLIYDLVCCLFDQRVNVDNTIHHLISIVGIGAGLVYEKSGSELVAALWITEI 134
               L  TL Y I+DL  C++ +        HH +SI+GI   LV  +SG+E+ A L+ +EI
Sbjct:    76 HVLCLTLGYFIFDLGWCIYFRSEGPLMLAHHTLSILGIIVALVLGESGTEVNAVLFGSEI 135

Query:   135 SSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSARNPI-IIKA 193
             ++P L  R  L+E G+  +      D  F A+FT  R+  G  L +  + +  P   +K 
Sbjct:   136 TNPLLQIRWFLRETGHYHSFTGDVVDFLFVALFTGVRIGVGACLLFCEMVSPTPKWFVKV 195

Query:   194 MALGLQLVSAFWFFKIARMVKYKLAK----WTSK 223
               + + +VS  + F I R    K  K    W S+
Sbjct:   196 GGVAMYVVSWCFMFSIWRFAWRKSIKKYHTWRSR 229

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00014554001 SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (231 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	226
smart00724	205	smart00724, TLC, TRAM, LAG1 and CLN8 homology doma	1e-24
pfam03798	198	pfam03798, TRAM_LAG1_CLN8, TLC domain	2e-18

>gnl|CDD|214789 smart00724, TLC, TRAM, LAG1 and CLN8 homology domains

 Score = 95.8 bits (239), Expect = 1e-24
 Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 17/205 (8%)

Query: 29  NRSFDFCNRLVSTTHAALAVTLTSLSVQDWRCPV-CPLASNSSPLQMQTLAWTLAYLIYD 87
           ++  +  NRLVS  H+ +A      S      P         SPL      ++L Y I+D
Sbjct: 1   SKFNESSNRLVSYLHSVIAGLYALYSEPWLSDPKSLYPIQGMSPLAKFYYLFSLGYFIHD 60

Query: 88  LVCCLFDQRVN----VDNTIHHLISIVGIGAGLVYEKSGSELVAALWITEISSPFLHCRE 143
           LV  L  Q +      +  +HH+ +++ I    V   +   L+  L + E+S PFLH R+
Sbjct: 61  LVALLLFQDLKRKDFKEMLVHHIATLLLISLSYVLNFTRLGLLL-LLLHELSDPFLHLRK 119

Query: 144 MLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSARN-----------PIIIK 192
           +L   G + + L     V FA +F   R++  P+L                     ++  
Sbjct: 120 LLNYAGRKKSLLYDVNFVLFAVVFFVFRLILFPFLILTVTVHYAQAESGLFPPLLYLLFL 179

Query: 193 AMALGLQLVSAFWFFKIARMVKYKL 217
            + L LQL++ +WFF I RM +  L
Sbjct: 180 LLLLCLQLLNIYWFFLILRMARKLL 204

Protein domain with at least 5 transmembrane alpha-helices. Lag1p and Lac1p are essential for acyl-CoA-dependent ceramide synthesis, TRAM is a subunit of the translocon and the CLN8 gene is mutated in Northern epilepsy syndrome. The family may possess multiple functions such as lipid trafficking, metabolism, or sensing. Trh homologues possess additional homeobox domains. Length = 205

>gnl|CDD|217735 pfam03798, TRAM_LAG1_CLN8, TLC domain

 Score = 79.6 bits (197), Expect = 2e-18
 Identities = 52/201 (25%), Positives = 82/201 (40%), Gaps = 25/201 (12%)

Query: 33  DFCNRLVSTTHAALAVTL----------TSLSVQDWRCPVCPLASNSSPLQMQTLAWTLA 82
            F  R VS  H  ++  L                 W      +   +S L        L 
Sbjct: 1   KFNERGVSLVHYLVSGILGLYVLLSEPWFWNPTWLWYPYPDRILGGTSALVKFYYLIQLG 60

Query: 83  YLIYDLVCCLF-DQRVNVDNTIHHLISIVGIGAGLVYEKSGSELVAALWITEISSPFLHC 141
           Y ++DL+  LF ++R   +  +HH+I+++ I     Y       +  L + E+S PFLH 
Sbjct: 61  YFLHDLLVLLFYEKRRKWEMLLHHIITLLLISFSYFY-NFTRVGLLVLLLHELSDPFLHL 119

Query: 142 REMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSARN-----------PII 190
           R+ L  LG + +   L   V F   F   R+V GP+L  L++                 I
Sbjct: 120 RKFLNYLGKKKSCDVLF--VLFLVSFFLVRLVLGPFLILLSILDEARLDIPGGPFNLYYI 177

Query: 191 IKAMALGLQLVSAFWFFKIAR 211
             A+ L LQL++ +WF+ I R
Sbjct: 178 FLALLLVLQLLNIYWFYLIIR 198

Length = 198

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	226
smart00724	205	TLC TRAM, LAG1 and CLN8 homology domains. Protein	100.0
PF03798	198	TRAM_LAG1_CLN8: TLC domain; InterPro: IPR006634 TL	100.0
KOG4561	281	consensus Uncharacterized conserved protein, conta	100.0
KOG4474	253	consensus Uncharacterized conserved protein [Funct	99.97
KOG1607	318	consensus Protein transporter of the TRAM (translo	99.27
COG5058	395	LAG1 Protein transporter of the TRAM (translocatin	99.04

>smart00724 TLC TRAM, LAG1 and CLN8 homology domains

Probab=100.00  E-value=1.7e-32  Score=224.34  Aligned_cols=188  Identities=28%  Similarity=0.369  Sum_probs=153.3

Q ss_pred             CCccCchhhhHHHHHHHHHHHHHHHHhcCCCCC-CCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhhc----cCCCchhHH
Q 027197           29 NRSFDFCNRLVSTTHAALAVTLTSLSVQDWRCP-VCPLASNSSPLQMQTLAWTLAYLIYDLVCCLFD----QRVNVDNTI  103 (226)
Q Consensus        29 ~~~~~w~~r~vS~iHa~v~~~~~~~~l~~~~~~-~d~~~~~~t~~~~~~~~is~GYfl~Dl~~~~~~----~~~~~~~~~  103 (226)
                      +|+.||++|++|.+||.+++..+++......++ .+....++++.++...++++|||++|+..+..+    +++++++++
T Consensus         1 ~k~~e~~~~~vs~~hs~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~gYfi~d~~~~~~~~~~~~~d~~~~~~   80 (205)
T smart00724        1 SKFNESSNRLVSYLHSVIAGLYALYSEPWLSDPKSLYPIQGMSPLAKFYYLFSLGYFIHDLVALLLFQDLKRKDFKEMLV   80 (205)
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhccCCcccCCcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHH
Confidence            578999999999999999999887654422222 122334668888999999999999999999843    233799999


Q ss_pred             HHHHHHHHHHHHHhcccchhHHHHHHHHHhhcchhhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHhhhhhhhhhHhhc
Q 027197          104 HHLISIVGIGAGLVYEKSGSELVAALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTL  183 (226)
Q Consensus       104 HH~v~l~~~~~~~~~~~~~~~~~~~~ll~E~Stpfl~~r~~l~~~g~~~s~~~~~n~~~~~~~F~~~Ri~~~~~~~~~~~  183 (226)
                      ||++++.++..++..+... .....++++|+||||+|+||++++.|.++++.+..|+.+|+++|+.+|++..|+..+...
T Consensus        81 HHv~~~~~~~~~~~~~~~~-~~~~~~~l~E~s~~fl~~~~~l~~~~~~~~~~~~~~~~~f~~~f~~~R~~~~p~~~~~~~  159 (205)
T smart00724       81 HHIATLLLISLSYVLNFTR-LGLLLLLLHELSDPFLHLRKLLNYAGRKKSLLYDVNFVLFAVVFFVFRLILFPFLILTVT  159 (205)
T ss_pred             HHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhhHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998888877554 344589999999999999999999999999999999999999999999999999876643


Q ss_pred             cc------C-C-c---HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 027197          184 SA------R-N-P---IIIKAMALGLQLVSAFWFFKIARMVKYKL  217 (226)
Q Consensus       184 ~~------~-~-p---~~~~~~~~~l~~ln~~Wf~~i~~~~~k~~  217 (226)
                      ..      + . |   ........++++||++|+++|+|+++|..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ln~~Wf~~i~~~~~~~~  204 (205)
T smart00724      160 VHYAQAESGLFPPLLYLLFLLLLLCLQLLNIYWFFLILRMARKLL  204 (205)
T ss_pred             hhhhhhhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            21      1 1 2   23345678899999999999999998875

Protein domain with at least 5 transmembrane alpha-helices. Lag1p and Lac1p are essential for acyl-CoA-dependent ceramide synthesis, TRAM is a subunit of the translocon and the CLN8 gene is mutated in Northern epilepsy syndrome. The family may possess multiple functions such as lipid trafficking, metabolism, or sensing. Trh homologues possess additional homeobox domains.

>PF03798 TRAM_LAG1_CLN8: TLC domain; InterPro: IPR006634 TLC is a protein domain with at least 5 transmembrane alpha-helices

Probab=100.00  E-value=4.6e-32  Score=219.61  Aligned_cols=178  Identities=29%  Similarity=0.360  Sum_probs=144.2

Q ss_pred             CchhhhHHHHHHHHHHHHHHHHhcCCC----CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhhcc-CC--CchhHHHH
Q 027197           33 DFCNRLVSTTHAALAVTLTSLSVQDWR----CPVCPLASNSSPLQMQTLAWTLAYLIYDLVCCLFDQ-RV--NVDNTIHH  105 (226)
Q Consensus        33 ~w~~r~vS~iHa~v~~~~~~~~l~~~~----~~~d~~~~~~t~~~~~~~~is~GYfl~Dl~~~~~~~-~~--~~~~~~HH  105 (226)
                      ||+||++|++|+++++.+|++++.+.+    ...|...+++++..+...++++|||++|+.++.... ..  ..++++||
T Consensus         1 ~~~~~~~s~~h~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gYf~~Dl~~~~~~~~~~~d~~~~~~HH   80 (198)
T PF03798_consen    1 KWNNRVVSFVHAIVSSIWGLYILLNDPELWSDWPDDPWYYSSWLVKFYYAFSLGYFLYDLIVMLLYYRKRGDFWEMLLHH   80 (198)
T ss_pred             CHhHHHHHHHHHHHHHHHHHHHHhcCcHHhhhcccCccCCccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHhhHHH
Confidence            799999999999999999999877544    123444445566667799999999999999998743 22  38999999


Q ss_pred             HHHHHHHHHHHhcccchhHHHHHHHHHhhcchhhhHHHHHHHh-CC-CCChhHHHHHHHHHHHHHHHhhhhhhhhhHhhc
Q 027197          106 LISIVGIGAGLVYEKSGSELVAALWITEISSPFLHCREMLKEL-GY-RDTGLNLTADVTFAAIFTFARMVCGPYLAYLTL  183 (226)
Q Consensus       106 ~v~l~~~~~~~~~~~~~~~~~~~~ll~E~Stpfl~~r~~l~~~-g~-~~s~~~~~n~~~~~~~F~~~Ri~~~~~~~~~~~  183 (226)
                      ++++.++..++..+ .+.+.+..++++|+||||+|+||++++. |. ++++.+..|+.+|+++|+.+|++..|+..+...
T Consensus        81 ~~~l~~~~~~~~~~-~~~~~~~~~ll~E~st~fl~~r~~l~~~~~~~~~~~~~~~~~~~f~~~f~~~Ri~~~~~~~~~~~  159 (198)
T PF03798_consen   81 VVTLVLFYFSYFYN-FGRFGIVVFLLHEISTPFLNLRWFLKYLGGYSKKSSLYRFNGVLFAVTFFVFRIVLFPYLIYWVY  159 (198)
T ss_pred             HHHHHHHHHhhHHH-HhhHHHHHHHHHhcccHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999988888765 4456678899999999999999999999 77 678999999999999999999999999765432


Q ss_pred             cc------C--Cc---HHHHHHHHHHHHHHHHHHHHHHH
Q 027197          184 SA------R--NP---IIIKAMALGLQLVSAFWFFKIAR  211 (226)
Q Consensus       184 ~~------~--~p---~~~~~~~~~l~~ln~~Wf~~i~~  211 (226)
                      ..      .  .+   .....+..++++||++|+++|+|
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~Ln~~W~~~i~r  198 (198)
T PF03798_consen  160 WDVWPLPLWKVPWPVPWIFLVLLLVLFVLNIYWFYLILR  198 (198)
T ss_pred             HHhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            21      1  11   23345567789999999999987

Lag1p and Lac1p are essential for acyl-CoA-dependent ceramide synthesis [], TRAM is a subunit of the translocon and the CLN8 gene is mutated in Northern epilepsy syndrome. Proteins containing this domain may possess multiple functions such as lipid trafficking, metabolism, or sensing. Trh homologues possess additional homeobox domains [].; GO: 0016021 integral to membrane

>KOG4561 consensus Uncharacterized conserved protein, contains TBC domain [Signal transduction mechanisms; General function prediction only]

Probab=100.00  E-value=2.7e-34  Score=240.55  Aligned_cols=216  Identities=17%  Similarity=0.256  Sum_probs=158.9

Q ss_pred             HHHHHHHHHHHHHHHHH---Hh-----------hCCCCccCch-hhhHHHHHHHHHHHHHHHHhcCCCC-CCCCCCCCCc
Q 027197            7 KLVVVAVVSWTAAFLFI---RK-----------IFPNRSFDFC-NRLVSTTHAALAVTLTSLSVQDWRC-PVCPLASNSS   70 (226)
Q Consensus         7 ~~~~~~~~~~~~~~~~~---~~-----------l~~~~~~~w~-~r~vS~iHa~v~~~~~~~~l~~~~~-~~d~~~~~~t   70 (226)
                      .....+.+++..+|..+   +.           +.++.|.||| +|++|++|+++++  +++.+++.+. ++|...++..
T Consensus        30 ~~~~~~~l~~~v~y~~~~~~~~~s~s~~~~~~~l~~k~~i~wn~~~~Vs~~hslv~~--s~y~lf~~~~f~yD~~~~~~~  107 (281)
T KOG4561|consen   30 TAHCHGILFYFVVYQLCNVIHNISVSLSHTYRSLDKKLKIEWNCVRVVSTVHSLVSS--SLYFLFGTPYFHYDKATGYSV  107 (281)
T ss_pred             HHHHHHHHHHhhhhhhhceehheeehhhhhHhhhcCcEEEEEecCceeeeehHhhhc--ccceeecCcccchhhhhccce
Confidence            34556778888888888   32           6678999999 9999999999987  6666554332 3233322211


Q ss_pred             HHHHHH-HHHHHHHHHHHHHHH-h-hccCCCchhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhcchhhhHHHHHHH
Q 027197           71 PLQMQT-LAWTLAYLIYDLVCC-L-FDQRVNVDNTIHHLISIVGIGAGLVYEKSGSELVAALWITEISSPFLHCREMLKE  147 (226)
Q Consensus        71 ~~~~~~-~~is~GYfl~Dl~~~-~-~~~~~~~~~~~HH~v~l~~~~~~~~~~~~~~~~~~~~ll~E~Stpfl~~r~~l~~  147 (226)
                      ..+... .+.-.||++.|+..+ . .+...+.+|++||+++. ........+..+.++....+++|+||||+|+||++.+
T Consensus       108 ~~~~~~~~~~g~gy~i~dl~~i~~~~~~~~~~~fviHh~~s~-~~v~~~~~~~~g~y~~~~~L~~ElSTPFvnlrw~L~~  186 (281)
T KOG4561|consen  108 VWSKHRDTSVGIGYFIPDLTWIIVRYFVLGGIEFVIHHIASL-VFVGCLLRRGVGQYYAGTFLMAELSTPFVNLRWFLDK  186 (281)
T ss_pred             eecceeeccccceEecccceeEEEEeeeecCeeEEeeHHHHh-hhheeeEecCccceeeeeeheeecCCceeeHHHHHHH
Confidence            111111 011155999999744 3 34556999999999882 2333333344567888899999999999999999999


Q ss_pred             hCCCCChhHHHHHHHHHHHHHHHhhhhhhhhhHhhc--cc-----CCc----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 027197          148 LGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTL--SA-----RNP----IIIKAMALGLQLVSAFWFFKIARMVKYK  216 (226)
Q Consensus       148 ~g~~~s~~~~~n~~~~~~~F~~~Ri~~~~~~~~~~~--~~-----~~p----~~~~~~~~~l~~ln~~Wf~~i~~~~~k~  216 (226)
                      +|+|+|+.|.+||++++++|+++|++..|++.+.++  .+     +.|    .....+.+.++++|++||+||+|+++|.
T Consensus       187 ~~~k~Sl~~~vNG~lm~~~F~v~RIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~L~v~Nl~Wf~km~~ga~K~  266 (281)
T KOG4561|consen  187 AGQKKSLFYKVNGLLLLVVFFVARILLWPYMGWHYYWRYQGLVLNQVPPFLPLFLLGLNALLLVLNLYWFSKMVRGALKV  266 (281)
T ss_pred             cCcccchHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhchhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence            999999999999999999999999998888766554  11     122    3445567899999999999999999999


Q ss_pred             hhccccccc
Q 027197          217 LAKWTSKKA  225 (226)
Q Consensus       217 ~~~~~~~~~  225 (226)
                      +++.|+++.
T Consensus       267 ~~~~~~~~~  275 (281)
T KOG4561|consen  267 LKKAKTSPP  275 (281)
T ss_pred             cCcccCCCh
Confidence            988766543

>KOG4474 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.97  E-value=3.8e-30  Score=211.17  Aligned_cols=203  Identities=25%  Similarity=0.292  Sum_probs=166.2

Q ss_pred             HHHHHHHH-HHHHHHHHHhhCCCCccCchhhhHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHHHHHHHHHH
Q 027197            8 LVVVAVVS-WTAAFLFIRKIFPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWRCPVCPLASNSSPLQMQTLAWTLAYLIY   86 (226)
Q Consensus         8 ~~~~~~~~-~~~~~~~~~~l~~~~~~~w~~r~vS~iHa~v~~~~~~~~l~~~~~~~d~~~~~~t~~~~~~~~is~GYfl~   86 (226)
                      .++-+.++ |...|.-.|.+++-+|.++.|+.||++||++++.++...+.+++++.++.....+..+..+.++|+|||+|
T Consensus        19 i~~~~~~~~w~~~f~~~~~~s~~~~~r~~n~~VSl~HS~Isg~~a~~~l~~~~~~~~~~~~~~s~~~~~l~~fS~gYfiy   98 (253)
T KOG4474|consen   19 IVVYSALFGWGLIFFDVRWFSVYQKKRFSNLTVSLLHSTISGLWALLSLLYDPEMVDDPITYHSLSAYQLLLFSAGYFIY   98 (253)
T ss_pred             hhHHHHHhhcceeeeeeEeeccccchhhhhhHHHHHHHHHHHHHHHHHHHhCcccccCHHHHHhhhhHHHHHHHHHHHHH
Confidence            34444444 66666666656677799999999999999999999998887776665554334466667889999999999


Q ss_pred             HHHHHhhcc--CCCchhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhcchhhhHHHHHHHhCCCCCh-hHHHHHHHH
Q 027197           87 DLVCCLFDQ--RVNVDNTIHHLISIVGIGAGLVYEKSGSELVAALWITEISSPFLHCREMLKELGYRDTG-LNLTADVTF  163 (226)
Q Consensus        87 Dl~~~~~~~--~~~~~~~~HH~v~l~~~~~~~~~~~~~~~~~~~~ll~E~Stpfl~~r~~l~~~g~~~s~-~~~~n~~~~  163 (226)
                      |+++|..++  ...+++++||++++.++..+++.++++. ++.+.+++|+||||||+|.+++..|.+++. .++++..++
T Consensus        99 D~vDm~~~~~s~~s~e~LvHH~v~i~aF~~~lf~~~~~~-~~~~~llmEv~SiFLH~R~il~l~g~s~~~~~~rv~v~lN  177 (253)
T KOG4474|consen   99 DLVDMLMNEQSELSWEYLVHHVVCIIAFVLGLFYSKFLG-YVVAALLMEVSSIFLHLRSILKLAGLSTTLPSFRVVVYLN  177 (253)
T ss_pred             HHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhHHHHHHHHHHHhCCCCCCchhHHHHHHH
Confidence            999999876  4579999999999999999999988765 568899999999999999999999997654 599999999


Q ss_pred             HHHHHHHhhhhhhhhhHhhccc--CCcHHH----HHHHHHHHHHHHHHHHHHHH
Q 027197          164 AAIFTFARMVCGPYLAYLTLSA--RNPIII----KAMALGLQLVSAFWFFKIAR  211 (226)
Q Consensus       164 ~~~F~~~Ri~~~~~~~~~~~~~--~~p~~~----~~~~~~l~~ln~~Wf~~i~~  211 (226)
                      .++|+++|.++..|+++....+  ..|+..    ..+...+.++|...++++++
T Consensus       178 ~i~f~~fR~~~~~~l~~~~i~~~~~~~~~~~~~~~gg~~~l~~~n~~l~~rll~  231 (253)
T KOG4474|consen  178 LITFFFFRLIPQIYLTYFLIANAPFLHWYLKLFALGGLLCLAVINTVLTLRLLA  231 (253)
T ss_pred             HHHHHHHHhccceeEEEEEeeeCCCcceehhHHHhhhHHHHHHHHHHHHHHHHH
Confidence            9999999999999887765543  344322    22457899999999999998

>KOG1607 consensus Protein transporter of the TRAM (translocating chain-associating membrane) superfamily [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.27  E-value=7e-10  Score=95.14  Aligned_cols=186  Identities=17%  Similarity=0.236  Sum_probs=127.3

Q ss_pred             cCchhhhHHHHHHHHHHHHHHHHhcCCCCCCC------CC-CCCCcHHHHHHHHHHHHHHHHHHHHHhh--ccCCCchhH
Q 027197           32 FDFCNRLVSTTHAALAVTLTSLSVQDWRCPVC------PL-ASNSSPLQMQTLAWTLAYLIYDLVCCLF--DQRVNVDNT  102 (226)
Q Consensus        32 ~~w~~r~vS~iHa~v~~~~~~~~l~~~~~~~d------~~-~~~~t~~~~~~~~is~GYfl~Dl~~~~~--~~~~~~~~~  102 (226)
                      .+.....=..+-=.++...|++...+.++-.|      .- ..+.++..+..-.+-.|+..+-+.....  .+++.++|+
T Consensus        87 ~k~~Es~Wk~~yy~~s~~~glyV~~~~~wf~~~k~~w~~yP~~~~~~~~k~~Y~~e~gfY~~~l~al~~d~~rkDf~~m~  166 (318)
T KOG1607|consen   87 KKFCESAWKFLYYLVSWIFGLYVMYHEPWFYDTKSFWEGYPDQTLPPSFKAYYLLEAGFYIQLLFALFLDEKRKDFWEMV  166 (318)
T ss_pred             hhhHHHHHHHHHHHHHHHHhhhheecchhhcCHHHHHhcCCCCCCCHHHHHHHHHhhHHHHHHHHHHHhhccccHHHHHH
Confidence            34444444455555566666655444222111      11 1122333345556788998888887764  345678999


Q ss_pred             HHHHHHHHHHHHHHhcccchhHHHHHHHHHhhcchhhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHhhhhhhhhh-Hh
Q 027197          103 IHHLISIVGIGAGLVYEKSGSELVAALWITEISSPFLHCREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLA-YL  181 (226)
Q Consensus       103 ~HH~v~l~~~~~~~~~~~~~~~~~~~~ll~E~Stpfl~~r~~l~~~g~~~s~~~~~n~~~~~~~F~~~Ri~~~~~~~-~~  181 (226)
                      +||++++.....+...+..-. ......+++.|.++|.+.++++..+.+  ..-.....+|+..|+..|+...|... +.
T Consensus       167 vHHvvTl~Li~lSy~~~f~R~-G~lil~lhD~SD~~Le~~K~~nY~~~~--~~~~~~F~~F~~~wi~~RL~~~p~wil~s  243 (318)
T KOG1607|consen  167 VHHVVTLILISLSYVFNFTRV-GTLILALHDASDVFLELGKMLNYLQFE--AIADFVFVLFAFSWIYTRLIYYPFWILRS  243 (318)
T ss_pred             HHHHHHHHHHHHHHHhhhhcc-cceeeeeecchHHHHHHHHHHchhhHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999988877776553221 225689999999999999999888754  56667778999999999998888753 22


Q ss_pred             hc------cc--CCc--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 027197          182 TL------SA--RNP--IIIKAMALGLQLVSAFWFFKIARMVKYKLAKW  220 (226)
Q Consensus       182 ~~------~~--~~p--~~~~~~~~~l~~ln~~Wf~~i~~~~~k~~~~~  220 (226)
                      +.      .+  ..|  ....+...++++||++|++.|.|++.|..++|
T Consensus       244 t~~~~~~~~~~~~~~~~~~~~~lL~~Lqll~i~W~~lI~rm~~r~~~~g  292 (318)
T KOG1607|consen  244 TSREDFSLRQYQPKPSYYFFNCLLLALQLLHIYWFYLILRMAYRVIKRG  292 (318)
T ss_pred             hHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            22      11  222  45566778999999999999999999999844

>COG5058 LAG1 Protein transporter of the TRAM (translocating chain-associating membrane) superfamily, longevity assurance factor [Intracellular trafficking and secretion]

Probab=99.04  E-value=1.5e-09  Score=92.27  Aligned_cols=205  Identities=18%  Similarity=0.217  Sum_probs=130.9

Q ss_pred             HHHHHHHHHHHHHHHh-----h-----------CCCCccCchhhhHHHHHHHHHHHHHHHHhcCCC-C--CC------CC
Q 027197           10 VVAVVSWTAAFLFIRK-----I-----------FPNRSFDFCNRLVSTTHAALAVTLTSLSVQDWR-C--PV------CP   64 (226)
Q Consensus        10 ~~~~~~~~~~~~~~~~-----l-----------~~~~~~~w~~r~vS~iHa~v~~~~~~~~l~~~~-~--~~------d~   64 (226)
                      ....++|..+|...|-     +           ++++..+.+...=+..--.+++..|+++.-..+ +  ..      -+
T Consensus       117 ~~F~lfy~ifftf~ref~md~virpf~l~~~v~s~kkikRf~eq~y~~fyy~v~g~~Glyvmrss~~w~fntk~l~etyp  196 (395)
T COG5058         117 LCFVLFYMIFFTFLREFLMDVVIRPFGLELNVRSEKKIKRFCEQMYAIFYYGVSGPFGLYVMRSSPLWFFNTKALYETYP  196 (395)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhhccccceEEEEecCcchhhhhHHHHHhCc
Confidence            3456778888887774     1           112224566666666666666667765432211 1  11      12


Q ss_pred             CCCCCcHHHHHHHHHHHHHHHHHHHHHhh----ccCCCchhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhcchhhh
Q 027197           65 LASNSSPLQMQTLAWTLAYLIYDLVCCLF----DQRVNVDNTIHHLISIVGIGAGLVYEKSGSELVAALWITEISSPFLH  140 (226)
Q Consensus        65 ~~~~~t~~~~~~~~is~GYfl~Dl~~~~~----~~~~~~~~~~HH~v~l~~~~~~~~~~~~~~~~~~~~ll~E~Stpfl~  140 (226)
                      ..+. ++.-+..-.+-.||-+......+.    ++++-++++.||++++..+..++..+..-.+. +....+++|+|||.
T Consensus       197 ~~~~-p~lfk~fYliqaafw~qQa~ilvLqlEkprkD~~elv~HHIVTllLI~lSY~fhftr~Gl-AI~itmDvSD~~Ls  274 (395)
T COG5058         197 VFYN-PFLFKAFYLIQAAFWAQQACILVLQLEKPRKDFKELVFHHIVTLLLIWLSYVFHFTRMGL-AIYITMDVSDFFLS  274 (395)
T ss_pred             cccC-cHHHHHHHHHHHHHHHHHHhhheeeecchhhhHHHHHHHHHHHHHHHHHHHHHHHHhccc-eEEEEEeccHHHHH
Confidence            3323 444355556778888888554432    35567899999999998777776544322222 45788999999999


Q ss_pred             HHHHHHHhCCCCChhHHHHHHHHHHHHHHHhhhhhhhhhHhhccc---------C--------Cc--HHHHHHHHHHHHH
Q 027197          141 CREMLKELGYRDTGLNLTADVTFAAIFTFARMVCGPYLAYLTLSA---------R--------NP--IIIKAMALGLQLV  201 (226)
Q Consensus       141 ~r~~l~~~g~~~s~~~~~n~~~~~~~F~~~Ri~~~~~~~~~~~~~---------~--------~p--~~~~~~~~~l~~l  201 (226)
                      +.+.++..|-   .+..-....|+..|+-.|-....-+.+..+++         +        .|  .++.+....++.+
T Consensus       275 ~sK~lnYl~~---~l~~~iF~iFv~~wIysRHyln~kIlw~vlt~~r~~g~~~L~va~~qykcwisl~i~~iLl~aLQlv  351 (395)
T COG5058         275 LSKTLNYLNS---VLATFIFGIFVFIWIYSRHYLNLKILWSVLTAFRTIGNFVLDVATQQYKCWISLPIVFILLQALQLV  351 (395)
T ss_pred             HHHHHHHhhc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhcCceeeEeechhhccchHHHHHHHHHHHHHHH
Confidence            9999998874   55555567888999999966544333322221         0        12  1234456789999


Q ss_pred             HHHHHHHHHHHHHHHhhc
Q 027197          202 SAFWFFKIARMVKYKLAK  219 (226)
Q Consensus       202 n~~Wf~~i~~~~~k~~~~  219 (226)
                      |++|+..|+|.++|.+..
T Consensus       352 niyWl~lIvRvayRv~~~  369 (395)
T COG5058         352 NIYWLFLIVRVAYRVIWE  369 (395)
T ss_pred             HHHHHHHHHHHHHHHhcc
Confidence            999999999999999843

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	226
1v54_K	56	IHQ, cytochrome C oxidase polypeptide VIIB; oxidor	81.82

>1v54_K IHQ, cytochrome C oxidase polypeptide VIIB; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: f.23.5.1 PDB: 1oco_K* 1occ_K* 1ocz_K* 1ocr_K* 1v55_K* 2dyr_K* 2dys_K* 2eij_K* 2eik_K* 2eil_K* 2eim_K* 2ein_K* 2occ_K* 2ybb_V* 2zxw_K* 3abk_K* 3abl_K* 3abm_K* 3ag1_K* 3ag2_K* ...

Probab=81.82  E-value=2.9  Score=25.60  Aligned_cols=35  Identities=11%  Similarity=0.201  Sum_probs=26.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHh-------hCCCCcc---Cchh
Q 027197            2 DYYILKLVVVAVVSWTAAFLFIRK-------IFPNRSF---DFCN   36 (226)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~-------l~~~~~~---~w~~   36 (226)
                      |+|--.+++.|..||.+++..+-.       |+|-.|+   ||++
T Consensus        11 dKYGn~~L~~Ga~FC~a~W~y~~TQ~GIeWnlSPVGrVtPkeWr~   55 (56)
T 1v54_K           11 DKYGNAVLASGATFCVAVWVYMATQIGIEWNPSPVGRVTPKEWRE   55 (56)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCTTTCCCCCCC-
T ss_pred             hhcCceeeecchhhhHhhHhhhheeeceeeccCcccccCchhhcc
Confidence            688889999999999999887763       7775554   5653

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00