Citrus Sinensis ID: 027326

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-----
Protein Sequence
MTPRRRTIMTSLLLLLLSLPSISLAYRPGDIVPMSKMSQYHNSRTVWHDVIGKHCPIFAVNREALIPIAKPTGFTGADPVKISFQVGREKFRVPWLFVINRKSSQVPMIDVHLRYSGNDLLGVTAKIVDMPQRYVEIHPDLPKYFWQPESWPKHVLIRYTWEEQSEIDVASGFYVLFASGKSLYSNQGSKWYWLLYRALISHSCCVNFLASRFCRNFLCQLHLTS
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHcHHHcccccccccccccccccccccccEEEEcccccccccccccEEEEEccccccccccccEEEEEEEcccccEEcEEEEEccccccccEEEEEEEEEccEEEEEEEEEEEcccHHHHHccccccccccccccccEEEEEEEEEEEEEEEccccEEEEEEccEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHcccccccccHHHHHcccccccccccEEEEEccccccccccccEEEEEEEcccccEcEEEEEEccccccccEEEEEEEEccccEEEEEEEEEcccHHHHHHcHHHHHHHccccccccEEEEEEEEEEEccccccccEEEEEccccHHHHHcccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MTPRRRTIMTSLLLLLLSlpsislayrpgdivpmskmsqyhnsrtvwhdvigkhcpifavnrealipiakptgftgadpvkisfqvgrekfrvPWLFVINrkssqvpmidvhlrysgndllGVTAkivdmpqryveihpdlpkyfwqpeswpkhvLIRYTWeeqseidvaSGFYVLFASGKslysnqgsKWYWLLYRALISHSCCVNFLASRFCRNFLCQLHLTS
Flexible Loop (DISEMBL)
MTPRRRTIMTSLLLLLLSLPSISLAYRPGDIVPMSKMSQYHNSRTVWHDVIGKHCPIFAVNREALIPIAkptgftgadpVKISFQVGREKFRVPWLFVINRKSSQVPMIDVHLRYSGNDLLGVTAKIVDMPQRYVEIHPDLPKYFWQPESWPKHVLIRYTWEEQSEIDVASGFYVLFASGKSLYSNQGSKWYWLLYRALISHSCCVNFLASRFCRNFLCQLHLTS
Low Complexity Region (SEG)
MTPRRRTIMTsllllllslpsislAYRPGDIVPMSKMSQYHNSRTVWHDVIGKHCPIFAVNREALIPIAKPTGFTGADPVKISFQVGREKFRVPWLFVINRKSSQVPMIDVHLRYSGNDLLGVTAKIVDMPQRYVEIHPDLPKYFWQPESWPKHVLIRYTWEEQSEIDVASGFYVLFASGKSLYSNQGSKWYWLLYRALISHSCCVNFLASRFCRNFLCQLHLTS
Disordered region (IsUnstruct)
*******IMTSLLLLLLSLPSISLAYRPGDIVPMSKMSQYHNSRTVWHDVIGKHCPIFAVNREALIPIAKPTGFTGADPVKISFQVGREKFRVPWLFVINRKSSQVPMIDVHLRYSGNDLLGVTAKIVDMPQRYVEIHPDLPKYFWQPESWPKHVLIRYTWEEQSEIDVASGFYVLFASGKSLYSNQGSKWYWLLYRALISHSCCVNFLASRFCRNFLCQLHL**
Disordered Region (DISOPRED)
**********SLLLLLLSLPSISLAYRPGDIVPMSK********TVWHDVIGKHCPIFAVNREALIPIAKPTGFTGADPVKISFQVGREKFRVPWLFVINRKSSQVPMIDVHLRYSGNDLLGVTAKIVDMPQRYVEIHPDLPKYFWQPESWPKHVLIRYTWEEQSEIDVASGFYVLFASGKSLYSNQGSKWYWLLYRALISHSCCVNFLASRFCRNFLCQLHLT*
Disordered Region (DISEMBL)
MTPRRRTIMTSLLLLLLSLPSISLAYRPGDIVPMSKMSQYHNSRTVWHDVIGKHCPIFAVNREALIPIAKPTGFTGADPVKISFQVGREKFRVPWLFVINRKSSQVPMIDVHLRYSGNDLLGVTAKIVDMPQRYVEIHPDLPKYFWQPESWPKHVLIRYTWEEQSEIDVASGFYVLFASGKSLYSNQGSKWYWLLYRALISHSCCVNFLASRFCRNFLCQLHLTS
Disordered Region (DISPRO)
****RRTIMTSLLLLLLSLPSISLAYRPGDIVPMSKMSQYHNSRTVWHDVIGKHCPIFAVNREALIPIAKPTGFTGADPVKISFQVGREKFRVPWLFVINRKSSQVPMIDVHLRYSGNDLLGVTAKIVDMPQRYVEIHPDLPKYFWQPESWPKHVLIRYTWEEQSEIDVASGFYVLFASGKSLYSNQGSKWYWLLYRALISHSCCVNFLASRFCRNFLCQLHL**
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTPRRRTIMTSLLLLLLSLPSISLAYRPGDIVPMSKMSQYHNSRTVWHDVIGKHCPIFAVNREALIPIAKPTGFTGADPVKISFQVGREKFRVPWLFVINRKSSQVPMIDVHLRYSGNDLLGVTAKIVDMPQRYVEIHPDLPKYFWQPESWPKHVLIRYTWEEQSEIDVASGFYVLFASGKSLYSNQGSKWYWLLYRALISHSCCVNFLASRFCRNFLCQLHLTS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	225
118488995	221	unknown [Populus trichocarpa x Populus d	0.8	0.814	0.744	2e-79
224139342	221	predicted protein [Populus trichocarpa]	0.8	0.814	0.738	2e-78
255584249	226	conserved hypothetical protein [Ricinus	0.795	0.792	0.741	1e-76
225439667	219	PREDICTED: uncharacterized protein LOC10	0.693	0.712	0.826	1e-74
226501618	227	uncharacterized protein LOC100278212 pre	0.795	0.788	0.7	4e-74
297819862	230	hypothetical protein ARALYDRAFT_906509 [	0.764	0.747	0.726	9e-72
18409385	230	uncharacterized protein [Arabidopsis tha	0.764	0.747	0.720	4e-71
21617957	227	unknown [Arabidopsis thaliana]	0.764	0.757	0.720	5e-71
242087037	228	hypothetical protein SORBIDRAFT_09g00500	0.724	0.714	0.736	1e-70
357506569	228	hypothetical protein MTR_7g072680 [Medic	0.737	0.728	0.703	7e-70

>gi|118488995|gb|ABK96305.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 134/180 (74%), Positives = 158/180 (87%)

Query: 1   MTPRRRTIMTSLLLLLLSLPSISLAYRPGDIVPMSKMSQYHNSRTVWHDVIGKHCPIFAV 60
           M   R++ + S+   L+SLPS+S AYRPGDIVPMSKM QYH+SRTVWHD+IGKHCPIFAV
Sbjct: 1   MEANRKSRIASVFFFLISLPSVSFAYRPGDIVPMSKMGQYHSSRTVWHDMIGKHCPIFAV 60

Query: 61  NREALIPIAKPTGFTGADPVKISFQVGREKFRVPWLFVINRKSSQVPMIDVHLRYSGNDL 120
           NRE LIPIAKPTG+TG+DP K+SFQVG+EKF +PWLFVI+RKSS+VPMIDVHLRYSG+DL
Sbjct: 61  NREVLIPIAKPTGYTGSDPYKLSFQVGKEKFLIPWLFVIHRKSSEVPMIDVHLRYSGSDL 120

Query: 121 LGVTAKIVDMPQRYVEIHPDLPKYFWQPESWPKHVLIRYTWEEQSEIDVASGFYVLFASG 180
            GVTAK++DMP  YVEIHPD+ + FW  E WPKH+L+RYTW+EQSEIDV+SGFYVLF SG
Sbjct: 121 HGVTAKVIDMPHHYVEIHPDIRQQFWDAERWPKHILVRYTWKEQSEIDVSSGFYVLFGSG 180

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139342|ref|XP_002323065.1| predicted protein [Populus trichocarpa] gi|222867695|gb|EEF04826.1| predicted protein [Populus trichocarpa]

 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 133/180 (73%), Positives = 157/180 (87%)

Query: 1   MTPRRRTIMTSLLLLLLSLPSISLAYRPGDIVPMSKMSQYHNSRTVWHDVIGKHCPIFAV 60
           M   R++ + S+   L+SLPS+S AYRPGDIVPMSKM QYH+SRTVWHD+IGKHCPIFAV
Sbjct: 1   METNRKSRIASVFFFLISLPSVSFAYRPGDIVPMSKMGQYHSSRTVWHDMIGKHCPIFAV 60

Query: 61  NREALIPIAKPTGFTGADPVKISFQVGREKFRVPWLFVINRKSSQVPMIDVHLRYSGNDL 120
           NRE LIPIAKPTG+TG+DP K+SFQVG+EKF +PWLFVI+RKSS+VPMIDVHLRYSG+DL
Sbjct: 61  NREVLIPIAKPTGYTGSDPYKLSFQVGKEKFLIPWLFVIHRKSSEVPMIDVHLRYSGSDL 120

Query: 121 LGVTAKIVDMPQRYVEIHPDLPKYFWQPESWPKHVLIRYTWEEQSEIDVASGFYVLFASG 180
            GV AK++DMP  YVEIHPD+ + FW  E WPKH+L+RYTW+EQSEIDV+SGFYVLF SG
Sbjct: 121 HGVMAKVIDMPHHYVEIHPDIHQKFWDAELWPKHILVRYTWKEQSEIDVSSGFYVLFGSG 180

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255584249|ref|XP_002532862.1| conserved hypothetical protein [Ricinus communis] gi|223527374|gb|EEF29516.1| conserved hypothetical protein [Ricinus communis]

 Score =  291 bits (746), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 135/182 (74%), Positives = 156/182 (85%), Gaps = 3/182 (1%)

Query: 2   TPRRRTIMTSLLLL---LLSLPSISLAYRPGDIVPMSKMSQYHNSRTVWHDVIGKHCPIF 58
           T  R +   +L+LL   LLSLPS S AYRPGDIVPMS+M QYH+SRT+W D+IGKHCP+F
Sbjct: 4   TSNRSSKKNALILLMSFLLSLPSTSTAYRPGDIVPMSEMGQYHSSRTLWQDMIGKHCPVF 63

Query: 59  AVNREALIPIAKPTGFTGADPVKISFQVGREKFRVPWLFVINRKSSQVPMIDVHLRYSGN 118
            VNRE LIPI KPTG+TGADP KISFQVGREKF VPWLF+INR+SS+VPMIDVHLRYSG+
Sbjct: 64  GVNREVLIPIPKPTGYTGADPYKISFQVGREKFLVPWLFLINRRSSEVPMIDVHLRYSGS 123

Query: 119 DLLGVTAKIVDMPQRYVEIHPDLPKYFWQPESWPKHVLIRYTWEEQSEIDVASGFYVLFA 178
           DL GVTAK++DMP  YVE+HP++ K FW P+ WPKHVL+RYTWEEQS+IDVASGFYVLF 
Sbjct: 124 DLHGVTAKVIDMPHHYVELHPNIRKQFWDPQVWPKHVLVRYTWEEQSDIDVASGFYVLFG 183

Query: 179 SG 180
           SG
Sbjct: 184 SG 185

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439667|ref|XP_002270471.1| PREDICTED: uncharacterized protein LOC100249981 [Vitis vinifera] gi|297735555|emb|CBI18049.3| unnamed protein product [Vitis vinifera]

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 129/156 (82%), Positives = 139/156 (89%)

Query: 25  AYRPGDIVPMSKMSQYHNSRTVWHDVIGKHCPIFAVNREALIPIAKPTGFTGADPVKISF 84
           AYRPGDIVPMSKM QYH+SRTVWHDV+GKHCPIFAVNRE LIPI KPTG+TGADP KISF
Sbjct: 23  AYRPGDIVPMSKMGQYHSSRTVWHDVVGKHCPIFAVNREVLIPIQKPTGYTGADPYKISF 82

Query: 85  QVGREKFRVPWLFVINRKSSQVPMIDVHLRYSGNDLLGVTAKIVDMPQRYVEIHPDLPKY 144
           QVGREKF +PWL +INRKSS+VPMIDVHLRYSGNDL GV AK+VDMP  YVEIHP++   
Sbjct: 83  QVGREKFLIPWLLLINRKSSEVPMIDVHLRYSGNDLHGVVAKVVDMPHHYVEIHPNIRTQ 142

Query: 145 FWQPESWPKHVLIRYTWEEQSEIDVASGFYVLFASG 180
           FW PE WPKHVL+RYTWEEQSEIDV SGFYVLF SG
Sbjct: 143 FWNPEHWPKHVLVRYTWEEQSEIDVTSGFYVLFGSG 178

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226501618|ref|NP_001145033.1| uncharacterized protein LOC100278212 precursor [Zea mays] gi|195605980|gb|ACG24820.1| hypothetical protein [Zea mays] gi|195628092|gb|ACG35876.1| hypothetical protein [Zea mays] gi|413944509|gb|AFW77158.1| hypothetical protein ZEAMMB73_638350 [Zea mays]

 Score =  283 bits (723), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 126/180 (70%), Positives = 153/180 (85%), Gaps = 1/180 (0%)

Query: 2   TPRRRTIMTSLLLLLLS-LPSISLAYRPGDIVPMSKMSQYHNSRTVWHDVIGKHCPIFAV 60
           +P R  ++ +LLL+L S LPS++ AYRPGDIVPM +  QYH SR+VW DV+G+HCP FAV
Sbjct: 8   SPARHGVLPALLLILCSSLPSLAAAYRPGDIVPMLRSGQYHGSRSVWFDVVGRHCPAFAV 67

Query: 61  NREALIPIAKPTGFTGADPVKISFQVGREKFRVPWLFVINRKSSQVPMIDVHLRYSGNDL 120
           NRE L+PI KPTGFTGADP KI+FQ+G EKF VPWL+VINRK+S+VP+ID HL+YSGND+
Sbjct: 68  NREVLMPIPKPTGFTGADPYKITFQIGHEKFHVPWLYVINRKTSEVPLIDFHLKYSGNDI 127

Query: 121 LGVTAKIVDMPQRYVEIHPDLPKYFWQPESWPKHVLIRYTWEEQSEIDVASGFYVLFASG 180
           LGVTAK+VDMP  YVE+HPD+ K FW P++WPK+VL+RYTWEEQSEIDV  GFYVLF SG
Sbjct: 128 LGVTAKVVDMPHHYVEVHPDIKKNFWDPQNWPKYVLVRYTWEEQSEIDVTGGFYVLFGSG 187

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297819862|ref|XP_002877814.1| hypothetical protein ARALYDRAFT_906509 [Arabidopsis lyrata subsp. lyrata] gi|297323652|gb|EFH54073.1| hypothetical protein ARALYDRAFT_906509 [Arabidopsis lyrata subsp. lyrata]

 Score =  275 bits (703), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 125/172 (72%), Positives = 145/172 (84%)

Query: 9   MTSLLLLLLSLPSISLAYRPGDIVPMSKMSQYHNSRTVWHDVIGKHCPIFAVNREALIPI 68
           + +L+L+ LS P++S AYRPGDIV MSKM QYH+SRT WHDVIGKHCPIFAVNRE LIPI
Sbjct: 17  IQALVLISLSFPALSSAYRPGDIVRMSKMGQYHSSRTTWHDVIGKHCPIFAVNREVLIPI 76

Query: 69  AKPTGFTGADPVKISFQVGREKFRVPWLFVINRKSSQVPMIDVHLRYSGNDLLGVTAKIV 128
           AKP G+TG DP KI FQVG EK+ + WL VINRKSS+VPMIDV+LRYSG DLLGVTA++V
Sbjct: 77  AKPIGYTGTDPYKIKFQVGSEKYLIHWLLVINRKSSEVPMIDVNLRYSGGDLLGVTAEVV 136

Query: 129 DMPQRYVEIHPDLPKYFWQPESWPKHVLIRYTWEEQSEIDVASGFYVLFASG 180
           DMP  Y+  HP++ K FW PE WPKHVL+RYTW+EQSEIDV+SGFYVLF S 
Sbjct: 137 DMPHSYLNTHPEIRKQFWDPEHWPKHVLVRYTWKEQSEIDVSSGFYVLFGSA 188

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18409385|ref|NP_566953.1| uncharacterized protein [Arabidopsis thaliana] gi|22531176|gb|AAM97092.1| putative protein [Arabidopsis thaliana] gi|30023682|gb|AAP13374.1| At3g51610 [Arabidopsis thaliana] gi|110742543|dbj|BAE99187.1| hypothetical protein [Arabidopsis thaliana] gi|332645291|gb|AEE78812.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  273 bits (698), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 124/172 (72%), Positives = 144/172 (83%)

Query: 9   MTSLLLLLLSLPSISLAYRPGDIVPMSKMSQYHNSRTVWHDVIGKHCPIFAVNREALIPI 68
           + +L+L+ LS P +S AYRPGDIV MSKM QYH+SRT WHDVIGKHCPIFAVNRE LIPI
Sbjct: 17  IQALVLISLSFPFLSSAYRPGDIVRMSKMGQYHSSRTTWHDVIGKHCPIFAVNREVLIPI 76

Query: 69  AKPTGFTGADPVKISFQVGREKFRVPWLFVINRKSSQVPMIDVHLRYSGNDLLGVTAKIV 128
           AKP G+TG DP KI FQVG EKF + WL VINRKSS+VPMIDV+LRYSG DLLGVTA+++
Sbjct: 77  AKPIGYTGTDPYKIKFQVGSEKFLIHWLLVINRKSSEVPMIDVNLRYSGGDLLGVTAQVI 136

Query: 129 DMPQRYVEIHPDLPKYFWQPESWPKHVLIRYTWEEQSEIDVASGFYVLFASG 180
           DMP  Y+  HP++ K FW P+ WPKHVL+RYTW+EQSEIDV+SGFYVLF S 
Sbjct: 137 DMPHSYLNTHPEIRKQFWDPQHWPKHVLVRYTWKEQSEIDVSSGFYVLFGSA 188

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21617957|gb|AAM67007.1| unknown [Arabidopsis thaliana]

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 124/172 (72%), Positives = 144/172 (83%)

Query: 9   MTSLLLLLLSLPSISLAYRPGDIVPMSKMSQYHNSRTVWHDVIGKHCPIFAVNREALIPI 68
           + +L+L+ LS P +S AYRPGDIV MSKM QYH+SRT WHDVIGKHCPIFAVNRE LIPI
Sbjct: 14  IQALVLISLSFPFLSSAYRPGDIVRMSKMGQYHSSRTTWHDVIGKHCPIFAVNREVLIPI 73

Query: 69  AKPTGFTGADPVKISFQVGREKFRVPWLFVINRKSSQVPMIDVHLRYSGNDLLGVTAKIV 128
           AKP G+TG DP KI FQVG EKF + WL VINRKSS+VPMIDV+LRYSG DLLGVTA+++
Sbjct: 74  AKPIGYTGTDPYKIKFQVGSEKFLIHWLLVINRKSSEVPMIDVNLRYSGGDLLGVTAQVI 133

Query: 129 DMPQRYVEIHPDLPKYFWQPESWPKHVLIRYTWEEQSEIDVASGFYVLFASG 180
           DMP  Y+  HP++ K FW P+ WPKHVL+RYTW+EQSEIDV+SGFYVLF S 
Sbjct: 134 DMPHSYLNTHPEIRKQFWDPQHWPKHVLVRYTWKEQSEIDVSSGFYVLFGSA 185

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242087037|ref|XP_002439351.1| hypothetical protein SORBIDRAFT_09g005000 [Sorghum bicolor] gi|241944636|gb|EES17781.1| hypothetical protein SORBIDRAFT_09g005000 [Sorghum bicolor]

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 120/163 (73%), Positives = 139/163 (85%)

Query: 18  SLPSISLAYRPGDIVPMSKMSQYHNSRTVWHDVIGKHCPIFAVNREALIPIAKPTGFTGA 77
           SLP  + AYRPGDIVPM +  QYH SRTVW DV+G+HCP FAVNRE L+PI KPTGFTGA
Sbjct: 25  SLPHFAAAYRPGDIVPMLRSGQYHGSRTVWFDVVGRHCPAFAVNREVLMPIPKPTGFTGA 84

Query: 78  DPVKISFQVGREKFRVPWLFVINRKSSQVPMIDVHLRYSGNDLLGVTAKIVDMPQRYVEI 137
           DP KI+FQ+G EKF VPWL+VINRK+S+VP+ID HL+YSGND+LGVTAK+VDMP  YVE+
Sbjct: 85  DPYKITFQIGHEKFHVPWLYVINRKTSEVPLIDFHLKYSGNDILGVTAKVVDMPHHYVEV 144

Query: 138 HPDLPKYFWQPESWPKHVLIRYTWEEQSEIDVASGFYVLFASG 180
           HPD+ K FW  + WPK+VL+RYTWEEQSEIDVA GFYVLF SG
Sbjct: 145 HPDIKKNFWDLQKWPKYVLVRYTWEEQSEIDVAGGFYVLFGSG 187

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357506569|ref|XP_003623573.1| hypothetical protein MTR_7g072680 [Medicago truncatula] gi|217075636|gb|ACJ86178.1| unknown [Medicago truncatula] gi|355498588|gb|AES79791.1| hypothetical protein MTR_7g072680 [Medicago truncatula] gi|388505934|gb|AFK41033.1| unknown [Medicago truncatula]

 Score =  269 bits (687), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 121/172 (70%), Positives = 145/172 (84%), Gaps = 6/172 (3%)

Query: 25  AYRPGDIVPMSKMSQYHNSRTVWHDVIGKHCPIFAVNREALIPIAKPTGFTGADPVKISF 84
           AY+PGDIVPMS+M QYH+SRTVW D+IG+HCPIFAVNRE LIPI KPTG+TGADP KISF
Sbjct: 32  AYKPGDIVPMSRMGQYHSSRTVWQDLIGRHCPIFAVNREVLIPIPKPTGYTGADPYKISF 91

Query: 85  QVGREKFRVPWLFVINRKSSQVPMIDVHLRYSGNDLLGVTAKIVDMPQRYVEIHPDLPKY 144
           QVGREKF +PWL V+NRKS++VPMID+ L+YSG+DLLGVTAK++DMP  YVEIHP++ K+
Sbjct: 92  QVGREKFYIPWLLVVNRKSTEVPMIDIELKYSGSDLLGVTAKVLDMPHHYVEIHPEIGKH 151

Query: 145 FWQPESWPKHVLIRYTWEEQSEIDVASGFYVLFASG------KSLYSNQGSK 190
           FW  + WPKH+L RYTW+E SEIDV SGFYVLF SG       S+Y+ Q S+
Sbjct: 152 FWDAQHWPKHILARYTWKEHSEIDVTSGFYVLFGSGLLLSFILSIYTLQSSR 203

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	225
TAIR|locus:2081870	230	NPU "AT3G51610" [Arabidopsis t	0.688	0.673	0.761	9.4e-66

TAIR|locus:2081870 NPU "AT3G51610" [Arabidopsis thaliana (taxid:3702)]

 Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
 Identities = 118/155 (76%), Positives = 133/155 (85%)

Query:    25 AYRPGDIVPMSKMSQYHNSRTVWHDVIGKHCPIFAVNREALIPIAKPTGFTGADPVKISF 84
             AYRPGDIV MSKM QYH+SRT WHDVIGKHCPIFAVNRE LIPIAKP G+TG DP KI F
Sbjct:    33 AYRPGDIVRMSKMGQYHSSRTTWHDVIGKHCPIFAVNREVLIPIAKPIGYTGTDPYKIKF 92

Query:    85 QVGREKFRVPWLFVINRKSSQVPMIDVHLRYSGNDLLGVTAKIVDMPQRYVEIHPDLPKY 144
             QVG EKF + WL VINRKSS+VPMIDV+LRYSG DLLGVTA+++DMP  Y+  HP++ K 
Sbjct:    93 QVGSEKFLIHWLLVINRKSSEVPMIDVNLRYSGGDLLGVTAQVIDMPHSYLNTHPEIRKQ 152

Query:   145 FWQPESWPKHVLIRYTWEEQSEIDVASGFYVLFAS 179
             FW P+ WPKHVL+RYTW+EQSEIDV+SGFYVLF S
Sbjct:   153 FWDPQHWPKHVLVRYTWKEQSEIDVSSGFYVLFGS 187


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.138   0.458    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      225       211   0.00081  112 3  11 22  0.43    32
                                                     31  0.48    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  617 (66 KB)
  Total size of DFA:  208 KB (2115 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.12u 0.11s 18.23t   Elapsed:  00:00:01
  Total cpu time:  18.12u 0.11s 18.23t   Elapsed:  00:00:01
  Start:  Fri May 10 09:51:51 2013   End:  Fri May 10 09:51:52 2013

GO:0003674 "molecular_function" evidence=ND

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0009555 "pollen development" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00