Citrus Sinensis ID: 027472

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220---
Protein Sequence
MASSSSSSNSPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDAVNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQNLGHAGLIAAAHHHHHHQNMGMNLIGGAGGGGRDHHFHHHFFPRDHHPNNNHNHNQHHQMIRGFDGAAAANGNNYDATLLAAGIGQFTQFQQPRAAAGDDRRSSIDPS
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHcccccccccccccccccHHHHHHHHHHHccHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccHHccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHHHHHcccccEcccccccccHHHHHHHHHHHcHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHccccccHHHHHHcccccHHcccccHccccccccccccc
Coil and Loop (DISEMBL)
massssssnspcaACKLLrrkcqpecvfapyfppdqpqkfanvhkVFGASNVTKLLNELQPSQREDAVNSLAYEAEMrlrdpvygcVGVISFLQHRLRQLQMDLSCAKSELSKYQNLGHAGLIAAAHhhhhhqnmgmnliggaggggrdhhfhhhffprdhhpnnnhnhnqhHQMIRGFdgaaaangnnydATLLAAGIgqftqfqqpraaagddrrssidps
Flexible Loop (DISEMBL)
massssssnspcAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDAVNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQNLGHAGLIAAAHHHHHHQNMGMNLIGGAGGGGRDHHFHHHFFPRDHHPNNNHNHNQHHQMIRGFDGAAAANGNNYDATLLAAGIGQFTQFqqpraaagddrrssidps
Low Complexity Region (SEG)
MAssssssnsPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDAVNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQNlghagliaaahhhhhhQNMGMNLIggaggggrdhhfhhhffprdhhpnnnhnhnqhhqMIRGFDgaaaangnnYDATLLAAGIGQFTQFQQPRAAAGDDRRSSIDPS
Disordered region (IsUnstruct)
***********CAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLN**********VNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCA*******************************************HFHHHFF******************IRGFDGAAAANGNNYDATLLAAGIGQFTQ*******************
Disordered Region (DISOPRED)
**************CKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDAVNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSK**************************************************************************************************************
Disordered Region (DISEMBL)
************AACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDAVNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQNLGHAGLIAAAHHHHHHQNMGMNLIGGAGGGGRDHHFHHHFFPRDHHPNNNHNHNQHHQMIRGFDGAAAANGNNYDATLLAAGIGQFTQF******************
Disordered Region (DISPRO)
*********SPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDAVNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQNLGHAGLIAAAHHHHHHQNMGMNLIGGAGGGGRDHHFHHHFFPRDHHPNNNHNHNQHHQMIRGFDGAAAANGNNYDATLLAAGIGQFTQFQQ****************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASSSSSSNSPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDAVNSLAYEAEMRLRDPVYGCVGVxxxxxxxxxxxxxxxxxxxxxxxxxxxxGHAGLIAAAHHHHHHQNMGMNLIGGAGGGGRDHHFHHHFFPRDHHPNNNHNHNQHHQMIRGFDGAAAANGNNYDATLLAAGIGQFTQFQQPRAAAGDDRRSSIDPS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	223	2.2.26 [Sep-21-2011]
O04479	199	LOB domain-containing pro	yes	no	0.869	0.974	0.700	3e-72
Q32SG3	260	LOB domain-containing pro	N/A	no	0.484	0.415	0.842	4e-50
A1YKY7	269	Protein IAL1 OS=Zea mays	N/A	no	0.484	0.401	0.805	6e-49
Q8LQH4	269	LOB domain-containing pro	yes	no	0.484	0.401	0.814	2e-48
A2WXT0	269	LOB domain-containing pro	N/A	no	0.484	0.401	0.814	2e-48
Q9FML4	186	Protein LATERAL ORGAN BOU	no	no	0.511	0.612	0.736	2e-45
Q9FKZ3	313	LOB domain-containing pro	no	no	0.488	0.348	0.788	3e-45
O64836	311	LOB domain-containing pro	no	no	0.529	0.379	0.658	3e-42
Q8L8Q3	159	LOB domain-containing pro	no	no	0.493	0.691	0.663	7e-40
Q8LBW3	193	LOB domain-containing pro	no	no	0.556	0.642	0.569	4e-37

>sp|O04479|LBD6_ARATH LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1

 Score =  271 bits (693), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 157/224 (70%), Positives = 174/224 (77%), Gaps = 30/224 (13%)

Query: 4   SSSSSNSPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQ 63
           +SSS+NSPCAACK LRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNEL PSQ
Sbjct: 2   ASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQ 61

Query: 64  REDAVNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQNLGHAGLI 123
           REDAVNSLAYEA+MRLRDPVYGCVGVIS LQH+LRQLQ+DLSCAKSELSKYQ+L   G++
Sbjct: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSL---GIL 118

Query: 124 AAAHHHHHHQNMGMNLIGGAGGGG----RDHHFHHHFFPRDHHPNNNHNHNQHHQMIRGF 179
           AA      HQ++G+NL+ GA  G     RDH+ HH FFPR+             QM  G 
Sbjct: 119 AAT-----HQSLGINLLAGAADGTATAVRDHYHHHQFFPRE-------------QMFGGL 160

Query: 180 DGAAAANGNNYDATLLAAGIGQFTQFQQPRAAAGDDRRSSIDPS 223
           D  A   GNNYD  +LA  IGQ TQFQQPRAAAGDD R ++DPS
Sbjct: 161 DVPA---GNNYDGGILA--IGQITQFQQPRAAAGDDGRRTVDPS 199

Negative regulator of cell proliferation in the adaxial side of leaves. Regulates the formation of a symmetric lamina and the establishment of venation. Positively regulates LATERAL ORGAN BOUNDARIES (LOB) within the shoot apex, and the class III HD-ZIP genes REV, PHB, and PHV. Interacts directly with ASYMMETRIC LEAVES 1 (AS1) to repress the knox homeobox genes BP/KNAT1, KNAT2, and KNAT6 and the abaxial determinants ARF3/ETT, KAN2 and YAB5. May act in parallel with the RDR6-SGS3-AGO7 pathway, an endogenous RNA silencing pathway, to regulate the leaf morphogenesis.
Arabidopsis thaliana (taxid: 3702)

>sp|Q32SG3|LBD6_MAIZE LOB domain-containing protein 6 OS=Zea mays GN=LBD6 PE=1 SV=1

 Score =  197 bits (501), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 91/108 (84%), Positives = 97/108 (89%)

Query: 8   SNSPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDA 67
           + SPCAACK LRRKCQP+CVFAPYFPPD PQKF +VH+VFGASNVTKLLNEL P QREDA
Sbjct: 30  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDA 89

Query: 68  VNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQ 115
           VNSLAYEA+MRLRDPVYGCVGVIS LQH LRQLQ DL+ AK ELSKYQ
Sbjct: 90  VNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQ 137

Promotes the switch from proliferation to differentiation in the embryo sac. Negative regulator of cell proliferation in the adaxial side of leaves. Regulates the formation of a symmetric lamina and the establishment of venation. Interacts directly with RS2 (rough sheath 2) to repress some knox homeobox genes.

Zea mays (taxid: 4577)

>sp|A1YKY7|IAL1_MAIZE Protein IAL1 OS=Zea mays PE=2 SV=1

 Score =  194 bits (492), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 87/108 (80%), Positives = 96/108 (88%)

Query: 8   SNSPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDA 67
           + SPCAACK LRRKCQP+CVFAPYFPPD PQKF  VH+VFGASNVTKL+NE+ P QREDA
Sbjct: 30  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVRVHRVFGASNVTKLMNEIHPLQREDA 89

Query: 68  VNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQ 115
           +NSLAYEA+MR+RDPVYGCVGVIS LQH LRQLQ DL+ AK ELSKYQ
Sbjct: 90  MNSLAYEADMRIRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQ 137

Zea mays (taxid: 4577)

>sp|Q8LQH4|LBD6_ORYSJ LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=LBD6 PE=2 SV=1

 Score =  192 bits (487), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 88/108 (81%), Positives = 95/108 (87%)

Query: 8   SNSPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDA 67
           + SPCAACK LRRKCQP+CVFAPYFPPD PQKF +VH+VFGASNVTKLLNEL P QREDA
Sbjct: 35  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDA 94

Query: 68  VNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQ 115
           VNSLAYEA+MRLRDPVYGCV +IS LQ  LRQLQ DL+ AK ELSKYQ
Sbjct: 95  VNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQ 142

Negative regulator of cell proliferation in the adaxial side of leaves. Regulates the formation of a symmetric lamina and the establishment of venation.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2WXT0|LBD6_ORYSI LOB domain-containing protein 6 OS=Oryza sativa subsp. indica GN=LBD6 PE=3 SV=1

 Score =  192 bits (487), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 88/108 (81%), Positives = 95/108 (87%)

Query: 8   SNSPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDA 67
           + SPCAACK LRRKCQP+CVFAPYFPPD PQKF +VH+VFGASNVTKLLNEL P QREDA
Sbjct: 35  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDA 94

Query: 68  VNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQ 115
           VNSLAYEA+MRLRDPVYGCV +IS LQ  LRQLQ DL+ AK ELSKYQ
Sbjct: 95  VNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQ 142

Negative regulator of cell proliferation in the adaxial side of leaves. Regulates the formation of a symmetric lamina and the establishment of venation.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q9FML4|LOB_ARATH Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana GN=LOB PE=2 SV=1

 Score =  181 bits (460), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 84/114 (73%), Positives = 98/114 (85%)

Query: 1   MASSSSSSNSPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQ 60
           MASSS+S NSPCAACK LRRKC P C+FAPYFPP++P KFANVHK+FGASNVTKLLNEL 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PSQREDAVNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKY 114
           P QREDAVNSLAYEAE R+RDPVYGCVG IS+LQ ++ +LQ +L  A ++L+ Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

Not known; ectopic expression of LOB leads to alterations in the size and shape of leaves and floral organs and causes male and female sterility.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FKZ3|LBD36_ARATH LOB domain-containing protein 36 OS=Arabidopsis thaliana GN=LBD36 PE=2 SV=1

 Score =  181 bits (460), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 86/109 (78%), Positives = 93/109 (85%)

Query: 6   SSSNSPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQRE 65
           +SS+SPCAACK LRRKC  ECVFAPYFPPDQPQKFA VHKVFGASNV KLLNEL  +QRE
Sbjct: 2   ASSSSPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQRE 61

Query: 66  DAVNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKY 114
           DAVNSL YEAE RLRDPVYGCVG+IS LQHRL+Q+  DL  AK EL+ Y
Sbjct: 62  DAVNSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATY 110

Controls the proximal-distal patterning in petals and the adaxial-abaxial determination of leaves. Involved in the repression of the homeobox gene BP.

Arabidopsis thaliana (taxid: 3702)

>sp|O64836|LBD10_ARATH LOB domain-containing protein 10 OS=Arabidopsis thaliana GN=LBD10 PE=2 SV=1

 Score =  171 bits (434), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 79/120 (65%), Positives = 93/120 (77%), Gaps = 2/120 (1%)

Query: 8   SNSPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDA 67
           +++PCAACKLLRRKC  ECVFAPYFPP  PQKF  VH+VFGASNVTK+LN+L P QRED 
Sbjct: 2   ASTPCAACKLLRRKCTQECVFAPYFPPTNPQKFIFVHRVFGASNVTKILNDLPPDQREDT 61

Query: 68  VNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQNLGHAGLIAAAH 127
           VNSL YEAE R+RDP+YGCVG+ISFLQ  L+++Q DL  AK EL  Y  LG   +I   +
Sbjct: 62  VNSLFYEAEARIRDPIYGCVGLISFLQQYLKKIQQDLLTAKEELVGY--LGPDAVIPPPY 119

Arabidopsis thaliana (taxid: 3702)

>sp|Q8L8Q3|LBD25_ARATH LOB domain-containing protein 25 OS=Arabidopsis thaliana GN=LBD25 PE=2 SV=3

 Score =  163 bits (413), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 73/110 (66%), Positives = 92/110 (83%)

Query: 5   SSSSNSPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQR 64
           S+ +NSPCAACK LRRKC  +CVFAPYFPP++P KFANVH++FGASNV+K+L+E+ P QR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 65  EDAVNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKY 114
           EDAVNSLAYEAE RL+DPVYGCVG IS LQ ++ +LQ +L    ++L +Y
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRY 142

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LBW3|LBD12_ARATH LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2

 Score =  154 bits (390), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 74/130 (56%), Positives = 94/130 (72%), Gaps = 6/130 (4%)

Query: 9   NSPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDAV 68
           +SPCA+CKLLRR+C  +C+FAPYFPPD P KFA VHKVFGASNV+K+L EL   QR DAV
Sbjct: 6   SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAV 65

Query: 69  NSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQNLGHAGLIAAAHH 128
           NSL +EA  R+RDPVYGCVG IS+LQ+++ QLQM L+ A++E+   Q      L      
Sbjct: 66  NSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTL------ 119

Query: 129 HHHHQNMGMN 138
             HHQ + ++
Sbjct: 120 QSHHQVLELD 129

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	223
255547418	218	conserved hypothetical protein [Ricinus	0.919	0.940	0.748	6e-83
225470636	216	PREDICTED: LOB domain-containing protein	0.887	0.916	0.707	7e-80
224101277	222	predicted protein [Populus trichocarpa]	0.905	0.909	0.705	2e-78
224109148	220	predicted protein [Populus trichocarpa]	0.901	0.913	0.704	2e-76
152926166	205	asymmetric leaves 2 [Carica papaya]	0.892	0.970	0.736	9e-74
15218746	199	LOB domain-containing protein 6 [Arabido	0.869	0.974	0.700	1e-70
297838145	201	hypothetical protein ARALYDRAFT_475666 [	0.869	0.965	0.699	3e-70
449470364	218	PREDICTED: LOB domain-containing protein	0.878	0.899	0.632	2e-67
356546320	214	PREDICTED: LOB domain-containing protein	0.874	0.911	0.647	3e-63
356554963	212	PREDICTED: LOB domain-containing protein	0.878	0.924	0.628	9e-62

>gi|255547418|ref|XP_002514766.1| conserved hypothetical protein [Ricinus communis] gi|223545817|gb|EEF47320.1| conserved hypothetical protein [Ricinus communis]

 Score =  312 bits (800), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 173/231 (74%), Positives = 186/231 (80%), Gaps = 26/231 (11%)

Query: 5   SSSSNSPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQR 64
           +SSSNSPCAACK LRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNEL PSQR
Sbjct: 2   ASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQR 61

Query: 65  EDAVNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQNL---GHAG 121
           EDAVNSLAYEA+MRLRDPVYGCVGVIS LQH+LRQLQMDLSCAKSELSKYQNL   GHAG
Sbjct: 62  EDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLSCAKSELSKYQNLGITGHAG 121

Query: 122 LIAAAHHHHHH-----QNMGMNLIGGAGGGGRDHHFHHHFFPRDHHPNNNHNHNQHHQMI 176
           L AAA           QN+G+NLIG AGGGGR+HH+HH FFPRD             QM+
Sbjct: 122 LFAAAAAAATATHHHPQNLGINLIGAAGGGGREHHYHHQFFPRD-----------QQQMM 170

Query: 177 RGFDGAAAANGNNYDATLLA----AGIGQFTQFQQPRAAAGDDRRSSIDPS 223
           R FD AAA   N YDA+LLA    A IGQ +QFQQPRAAAG+DRR++IDPS
Sbjct: 171 RSFDTAAA---NTYDASLLAMNVSASIGQLSQFQQPRAAAGEDRRTTIDPS 218

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225470636|ref|XP_002266137.1| PREDICTED: LOB domain-containing protein 6 [Vitis vinifera] gi|296080960|emb|CBI18626.3| unnamed protein product [Vitis vinifera]

 Score =  302 bits (773), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 167/236 (70%), Positives = 176/236 (74%), Gaps = 38/236 (16%)

Query: 5   SSSSNSPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQR 64
           +SSSNSPCAACK LRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNEL P QR
Sbjct: 2   ASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQR 61

Query: 65  EDAVNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQNLGHA--GL 122
           EDAVNSLAYEA+MRLRDPVYGCVGVIS LQH+LRQLQMDLSCAKSELSKYQNLG    GL
Sbjct: 62  EDAVNSLAYEADMRLRDPVYGCVGVISVLQHQLRQLQMDLSCAKSELSKYQNLGITSHGL 121

Query: 123 IAAAHHHHHH-----------QNMGMNLIGGAGGGGRDHHFHHHFFPRDHHPNNNHNHNQ 171
           IAAA                 QN+G+NLI    GGGRDHH+HH FFPR+           
Sbjct: 122 IAAAAAAATATATTHNHHHHPQNLGINLI----GGGRDHHYHHQFFPRE----------- 166

Query: 172 HHQMIRGFDGAAAANGNNYDATLLA----AGIGQFTQFQQPRAAAGDDRRSSIDPS 223
             QMIR FD       NNYDA+LLA    A IGQ +QF QPRAA GDDRR SIDPS
Sbjct: 167 QQQMIRTFDAT-----NNYDASLLAMNVSASIGQLSQFHQPRAAGGDDRR-SIDPS 216

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224101277|ref|XP_002312212.1| predicted protein [Populus trichocarpa] gi|222852032|gb|EEE89579.1| predicted protein [Populus trichocarpa]

 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 168/238 (70%), Positives = 181/238 (76%), Gaps = 36/238 (15%)

Query: 5   SSSSNSPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQR 64
           +SSSNSPCAACK LRRKCQPECVFAPYFPPDQPQKF+NVHKVFGASNVTKLLNEL PSQR
Sbjct: 2   ASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFSNVHKVFGASNVTKLLNELHPSQR 61

Query: 65  EDAVNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQNL---GHAG 121
           EDAVNSLAYEA+MRLRDPVYGCVGVIS LQH+LRQLQMDLSCAKSELSKYQNL   GHAG
Sbjct: 62  EDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLSCAKSELSKYQNLGINGHAG 121

Query: 122 LIAAAHHHHHH------------QNMGMNLIGGAGGGGRDHHFHHHFFPRDHHPNNNHNH 169
            + AA                  QN+G+NLIG  GGG RDHH+HH FFPRD         
Sbjct: 122 SLIAAAAAAATATATTHHHHHHPQNLGINLIGAGGGGSRDHHYHHQFFPRD--------- 172

Query: 170 NQHHQMIRGFDGAAAANGNNYDATLLA----AGIGQFTQFQQPRAAAGDDRRSSIDPS 223
               QM+R FD     +GNNYDA+LLA    A IGQ +QFQQPRAA GDDRR +IDPS
Sbjct: 173 --QQQMMRSFD-----SGNNYDASLLAMNVSASIGQLSQFQQPRAATGDDRR-TIDPS 222

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109148|ref|XP_002315100.1| predicted protein [Populus trichocarpa] gi|222864140|gb|EEF01271.1| predicted protein [Populus trichocarpa]

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 167/237 (70%), Positives = 181/237 (76%), Gaps = 36/237 (15%)

Query: 5   SSSSNSPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQR 64
           +SSSNSPCAACK LRRKCQPECVFAPYFPPDQPQKF+NVHKVFGASNVTKLLNEL PSQR
Sbjct: 2   ASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFSNVHKVFGASNVTKLLNELHPSQR 61

Query: 65  EDAVNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQNL---GHAG 121
           EDAVNSLAYEA+MRLRDPVYGCVGVIS LQH+LRQLQ+DLSCAKSELSKYQNL   GHAG
Sbjct: 62  EDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQNLGITGHAG 121

Query: 122 LIAAAHHHHHH-----------QNMGMNLIGGAGGGGRDHHFHHHFFPRDHHPNNNHNHN 170
            + AA                 QN+G+NLI GAGGG RDHH+HH FFP+D          
Sbjct: 122 SLIAAAAAAATATATTHHHHHPQNLGINLI-GAGGGSRDHHYHHQFFPKD---------- 170

Query: 171 QHHQMIRGFDGAAAANGNNYDATLLA----AGIGQFTQFQQPRAAAGDDRRSSIDPS 223
              QM+R FD      GNNYDA+LLA    A IGQ + FQQPRAAAGDDRR +IDPS
Sbjct: 171 -QQQMMRSFDA-----GNNYDASLLAMNVSASIGQLSHFQQPRAAAGDDRR-TIDPS 220

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|152926166|gb|ABS32237.1| asymmetric leaves 2 [Carica papaya]

 Score =  281 bits (720), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 165/224 (73%), Positives = 178/224 (79%), Gaps = 25/224 (11%)

Query: 5   SSSSNSPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQR 64
           +SSSNSPCAACK LRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNEL PSQR
Sbjct: 2   ASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQR 61

Query: 65  EDAVNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQNLG---HAG 121
           EDAVNSLAYEA+MRLRDPVYGCVGVIS LQH+LRQLQMDLSCAKSELSKYQNLG   HAG
Sbjct: 62  EDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLSCAKSELSKYQNLGITSHAG 121

Query: 122 LIAAAHH--HHHHQNMGMNLIGGAGGGGRDHHFHHHFFPRDHHPNNNHNHNQHHQMIRGF 179
           LIAAA    H+HHQN+G       GG  RDHH+HH FFPRDHH      H+Q   +   F
Sbjct: 122 LIAAAAAASHNHHQNIG-------GGAVRDHHYHHQFFPRDHH------HHQQQMLRTTF 168

Query: 180 DGAAAANGNNYDATLLAAGIGQFTQFQQPRAAAGDDRRSSIDPS 223
           + A   +G    A+LLA  IGQ +QFQ  RAAAGDDRR +IDPS
Sbjct: 169 EAAGGYDG----ASLLA--IGQLSQFQPSRAAAGDDRR-TIDPS 205

Source: Carica papaya

Species: Carica papaya

Genus: Carica

Family: Caricaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15218746|ref|NP_176739.1| LOB domain-containing protein 6 [Arabidopsis thaliana] gi|145326660|ref|NP_001077777.1| LOB domain-containing protein 6 [Arabidopsis thaliana] gi|145326662|ref|NP_001077778.1| LOB domain-containing protein 6 [Arabidopsis thaliana] gi|186493252|ref|NP_001117553.1| LOB domain-containing protein 6 [Arabidopsis thaliana] gi|29427552|sp|O04479.1|LBD6_ARATH RecName: Full=LOB domain-containing protein 6; AltName: Full=Protein ASYMMETRIC LEAVES 2 gi|17227156|gb|AAL38032.1|AF447887_1 LOB DOMAIN 6 [Arabidopsis thaliana] gi|2190548|gb|AAB60912.1| EST gb|ATTS1121 comes from this gene [Arabidopsis thaliana] gi|19918971|dbj|BAB88693.1| ASYMMETRIC LEAVES2 [Arabidopsis thaliana] gi|41351792|gb|AAS00609.1| AS2 [Arabidopsis thaliana] gi|92856575|gb|ABE77401.1| At1g65620 [Arabidopsis thaliana] gi|219807076|dbj|BAH10544.1| ASYMMETRIC LEAVES2 [Arabidopsis thaliana] gi|332196280|gb|AEE34401.1| LOB domain-containing protein 6 [Arabidopsis thaliana] gi|332196281|gb|AEE34402.1| LOB domain-containing protein 6 [Arabidopsis thaliana] gi|332196282|gb|AEE34403.1| LOB domain-containing protein 6 [Arabidopsis thaliana] gi|332196283|gb|AEE34404.1| LOB domain-containing protein 6 [Arabidopsis thaliana]

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 157/224 (70%), Positives = 174/224 (77%), Gaps = 30/224 (13%)

Query: 4   SSSSSNSPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQ 63
           +SSS+NSPCAACK LRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNEL PSQ
Sbjct: 2   ASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQ 61

Query: 64  REDAVNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQNLGHAGLI 123
           REDAVNSLAYEA+MRLRDPVYGCVGVIS LQH+LRQLQ+DLSCAKSELSKYQ+L   G++
Sbjct: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSL---GIL 118

Query: 124 AAAHHHHHHQNMGMNLIGGAGGGG----RDHHFHHHFFPRDHHPNNNHNHNQHHQMIRGF 179
           AA      HQ++G+NL+ GA  G     RDH+ HH FFPR+             QM  G 
Sbjct: 119 AAT-----HQSLGINLLAGAADGTATAVRDHYHHHQFFPRE-------------QMFGGL 160

Query: 180 DGAAAANGNNYDATLLAAGIGQFTQFQQPRAAAGDDRRSSIDPS 223
           D  A   GNNYD  +LA  IGQ TQFQQPRAAAGDD R ++DPS
Sbjct: 161 DVPA---GNNYDGGILA--IGQITQFQQPRAAAGDDGRRTVDPS 199

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297838145|ref|XP_002886954.1| hypothetical protein ARALYDRAFT_475666 [Arabidopsis lyrata subsp. lyrata] gi|297332795|gb|EFH63213.1| hypothetical protein ARALYDRAFT_475666 [Arabidopsis lyrata subsp. lyrata]

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 158/226 (69%), Positives = 176/226 (77%), Gaps = 32/226 (14%)

Query: 4   SSSSSNSPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQ 63
           +SSS+NSPCAACK LRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNEL PSQ
Sbjct: 2   ASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQ 61

Query: 64  REDAVNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQNLGHAGLI 123
           REDAVNSLAYEA+MRLRDPVYGCVGVIS LQH+LRQLQ+DLSCAKSELSKYQ+L   G++
Sbjct: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSL---GIL 118

Query: 124 AAAHHHHHHQNMGMNLIGGAGGGG-----RDHHFHHH-FFPRDHHPNNNHNHNQHHQMIR 177
           AA      HQ++G+NL+ GA  G      RDHH+HHH FFPR+             QM  
Sbjct: 119 AAT-----HQSLGINLLAGAADGTATATVRDHHYHHHQFFPRE-------------QMFG 160

Query: 178 GFDGAAAANGNNYDATLLAAGIGQFTQFQQPRAAAGDDRRSSIDPS 223
           G D  A   G+NYD  +LA  IGQ TQFQQPRAAAGDD R ++DPS
Sbjct: 161 GLDVPA---GSNYDGGILA--IGQITQFQQPRAAAGDDGRRTVDPS 201

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449470364|ref|XP_004152887.1| PREDICTED: LOB domain-containing protein 6-like [Cucumis sativus] gi|449528990|ref|XP_004171484.1| PREDICTED: LOB domain-containing protein 6-like [Cucumis sativus]

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 150/237 (63%), Positives = 164/237 (69%), Gaps = 41/237 (17%)

Query: 4   SSSSSNSPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQ 63
           +SSSSNSPCAACK LRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNEL P Q
Sbjct: 2   ASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 61

Query: 64  REDAVNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQNLG---HA 120
           REDAVNSLAYEA+MRLRDPVYGCVGVIS LQH+L +LQMDL+CAKSELSKYQNLG   HA
Sbjct: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHA 121

Query: 121 GLIA-------AAHHHHHHQNMGMNLIGGAGGGGRDHH---FHHHFFPRDHHPNNNHNHN 170
            LI+         H   +HQ         A    RD     +H  FFPRD          
Sbjct: 122 TLISPPSTLSTVPHGQRNHQ--------PAFNFARDQPHSLYHDQFFPRDQ--------- 164

Query: 171 QHHQMI--RGFDGAAAANGNNYDATL---LAAGIGQFT-QFQQPRAAAGDDRRSSID 221
           Q  QM+  R FDG     G+NYD  L   + A IG  + QFQQ RAAAGDDRR ++D
Sbjct: 165 QQPQMMLRRNFDG-----GSNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLD 216

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546320|ref|XP_003541575.1| PREDICTED: LOB domain-containing protein 6-like [Glycine max]

 Score =  247 bits (630), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 147/227 (64%), Positives = 159/227 (70%), Gaps = 32/227 (14%)

Query: 6   SSSNSPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQRE 65
           +SSNSPCAACK LRRKCQPEC FAPYFPPDQPQKFANVH++FGASNVTKLLN+L P QRE
Sbjct: 2   ASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQRE 61

Query: 66  DAVNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQNL-------G 118
           DAVNSLAYEAEMRLRDPVYGCVGVIS LQH+LRQLQMDL CAKSELS+YQNL        
Sbjct: 62  DAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYCAKSELSRYQNLSITTNLSS 121

Query: 119 HAGLIAAAHHHHHHQNMGMNLIGGAGGGGRD----HHFHHHFFPRDHHPNNNHNHNQHHQ 174
            A   A   +HHHHQNM     G   G GRD    +H HH FFPRD H        Q  Q
Sbjct: 122 LASESATTAYHHHHQNMS----GAGAGAGRDHHYHYHRHHQFFPRDQH--------QQQQ 169

Query: 175 MIRGFDGAAAANGNNYDATLLA----AGIGQFTQFQQPRAAAGDDRR 217
           ++R FD      GNNYDA+LLA    A +GQ  Q Q   AA G D R
Sbjct: 170 VVRSFDA-----GNNYDASLLAMNISANLGQLNQLQHHSAAGGGDDR 211

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554963|ref|XP_003545810.1| PREDICTED: LOB domain-containing protein 6-like [Glycine max]

 Score =  242 bits (617), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 144/229 (62%), Positives = 160/229 (69%), Gaps = 33/229 (14%)

Query: 6   SSSNSPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQRE 65
           +SSNSPCAACK LRRKCQPEC FAPYFPPDQPQKFANVH++FGASNVTKLLN+L P QRE
Sbjct: 2   ASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQRE 61

Query: 66  DAVNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQNLGHAGLIAA 125
           DAVNSLAYEAEMRLRDPVYGCVGVIS LQH+LRQLQMDL CAKSELS+YQNL     +++
Sbjct: 62  DAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYCAKSELSRYQNLSTTTNLSS 121

Query: 126 ------AHHHHHHQNMGMNLIGGAGGGGRD----HHFHHHFFPRDHHPNNNHNHNQHHQM 175
                 A  +HHHQN       G GG  RD    +H HH FFPRD H        Q  Q+
Sbjct: 122 LASESTATTYHHHQN-----TSGGGGFSRDHHYHYHHHHQFFPRDQH--------QQQQV 168

Query: 176 IRGFDGAAAANGNNYDATLLA----AGIGQFTQFQ-QPRAAAGDDRRSS 219
           ++ FD      GNNYDA+LLA    A +GQ  Q Q Q     GDDR  S
Sbjct: 169 VKSFDA-----GNNYDASLLAMNISASLGQLNQLQHQSATGGGDDRNRS 212

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	223
TAIR|locus:2034163	199	AS2 "ASYMMETRIC LEAVES 2" [Ara	0.475	0.532	0.933	9.9e-62
UNIPROTKB|Q32SG3	260	LBD6 "LOB domain-containing pr	0.470	0.403	0.857	4.8e-46
TAIR|locus:2174989	313	ASL1 "ASYMMETRIC LEAVES 2-like	0.466	0.332	0.798	4.6e-41
TAIR|locus:2161982	186	LOB "LATERAL ORGAN BOUNDARIES"	0.511	0.612	0.684	7.5e-41
TAIR|locus:2046817	311	LBD10 "LOB domain-containing p	0.466	0.334	0.730	2.1e-38
TAIR|locus:2089184	159	LBD25 "LOB domain-containing p	0.466	0.654	0.673	1.3e-36
TAIR|locus:2060842	193	ASL5 [Arabidopsis thaliana (ta	0.452	0.523	0.673	5.1e-35
TAIR|locus:2061828	224	LBD15 "LOB domain-containing p	0.470	0.468	0.638	5.8e-34
TAIR|locus:2065769	268	LBD13 "AT2G30340" [Arabidopsis	0.470	0.391	0.626	3.2e-33
TAIR|locus:2197500	172	LBD4 "LOB domain-containing pr	0.452	0.587	0.653	6.7e-33

TAIR|locus:2034163 AS2 "ASYMMETRIC LEAVES 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 533 (192.7 bits), Expect = 9.9e-62, Sum P(2) = 9.9e-62
 Identities = 99/106 (93%), Positives = 103/106 (97%)

Query:    11 PCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDAVNS 70
             PCAACK LRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNEL PSQREDAVNS
Sbjct:     9 PCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVNS 68

Query:    71 LAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQN 116
             LAYEA+MRLRDPVYGCVGVIS LQH+LRQLQ+DLSCAKSELSKYQ+
Sbjct:    69 LAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQS 114

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0009799 "specification of symmetry" evidence=IMP

GO:0009954 "proximal/distal pattern formation" evidence=IGI

GO:0048441 "petal development" evidence=IGI

GO:0005515 "protein binding" evidence=IPI

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=IMP

GO:0005654 "nucleoplasm" evidence=IDA

GO:0009943 "adaxial/abaxial axis specification" evidence=IMP

UNIPROTKB|Q32SG3 LBD6 "LOB domain-containing protein 6" [Zea mays (taxid:4577)]

 Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
 Identities = 90/105 (85%), Positives = 95/105 (90%)

Query:    11 PCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDAVNS 70
             PCAACK LRRKCQP+CVFAPYFPPD PQKF +VH+VFGASNVTKLLNEL P QREDAVNS
Sbjct:    33 PCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDAVNS 92

Query:    71 LAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQ 115
             LAYEA+MRLRDPVYGCVGVIS LQH LRQLQ DL+ AK ELSKYQ
Sbjct:    93 LAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQ 137

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2174989 ASL1 "ASYMMETRIC LEAVES 2-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 83/104 (79%), Positives = 88/104 (84%)

Query:    11 PCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDAVNS 70
             PCAACK LRRKC  ECVFAPYFPPDQPQKFA VHKVFGASNV KLLNEL  +QREDAVNS
Sbjct:     7 PCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVNS 66

Query:    71 LAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKY 114
             L YEAE RLRDPVYGCVG+IS LQHRL+Q+  DL  AK EL+ Y
Sbjct:    67 LFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATY 110

GO:0005634 "nucleus" evidence=ISM

GO:0009965 "leaf morphogenesis" evidence=IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP

GO:0009954 "proximal/distal pattern formation" evidence=IGI

GO:0048441 "petal development" evidence=IGI

TAIR|locus:2161982 LOB "LATERAL ORGAN BOUNDARIES" [Arabidopsis thaliana (taxid:3702)]

 Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
 Identities = 78/114 (68%), Positives = 91/114 (79%)

Query:     1 MAXXXXXXXXPCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQ 60
             MA        PCAACK LRRKC P C+FAPYFPP++P KFANVHK+FGASNVTKLLNEL 
Sbjct:     1 MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query:    61 PSQREDAVNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKY 114
             P QREDAVNSLAYEAE R+RDPVYGCVG IS+LQ ++ +LQ +L  A ++L+ Y
Sbjct:    61 PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

GO:0005634 "nucleus" evidence=ISM

GO:0010199 "organ boundary specification between lateral organs and the meristem" evidence=IMP

TAIR|locus:2046817 LBD10 "LOB domain-containing protein 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 76/104 (73%), Positives = 85/104 (81%)

Query:    11 PCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDAVNS 70
             PCAACKLLRRKC  ECVFAPYFPP  PQKF  VH+VFGASNVTK+LN+L P QRED VNS
Sbjct:     5 PCAACKLLRRKCTQECVFAPYFPPTNPQKFIFVHRVFGASNVTKILNDLPPDQREDTVNS 64

Query:    71 LAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKY 114
             L YEAE R+RDP+YGCVG+ISFLQ  L+++Q DL  AK EL  Y
Sbjct:    65 LFYEAEARIRDPIYGCVGLISFLQQYLKKIQQDLLTAKEELVGY 108

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2089184 LBD25 "LOB domain-containing protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 70/104 (67%), Positives = 87/104 (83%)

Query:    11 PCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDAVNS 70
             PCAACK LRRKC  +CVFAPYFPP++P KFANVH++FGASNV+K+L+E+ P QREDAVNS
Sbjct:    39 PCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVNS 98

Query:    71 LAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKY 114
             LAYEAE RL+DPVYGCVG IS LQ ++ +LQ +L    ++L +Y
Sbjct:    99 LAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRY 142

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2060842 ASL5 [Arabidopsis thaliana (taxid:3702)]

 Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
 Identities = 68/101 (67%), Positives = 84/101 (83%)

Query:    11 PCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDAVNS 70
             PCA+CKLLRR+C  +C+FAPYFPPD P KFA VHKVFGASNV+K+L EL   QR DAVNS
Sbjct:     8 PCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNS 67

Query:    71 LAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSEL 111
             L +EA  R+RDPVYGCVG IS+LQ+++ QLQM L+ A++E+
Sbjct:    68 LVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 108

GO:0005634 "nucleus" evidence=ISM

GO:0003677 "DNA binding" evidence=TAS

GO:0009965 "leaf morphogenesis" evidence=IMP

GO:0010016 "shoot system morphogenesis" evidence=IMP

TAIR|locus:2061828 LBD15 "LOB domain-containing protein 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 67/105 (63%), Positives = 84/105 (80%)

Query:    11 PCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDAVNS 70
             PCAACKLLRR+C  EC F+PYF P +P KFA+VHKVFGASNV+K+L E+  SQR DA NS
Sbjct:    45 PCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANS 104

Query:    71 LAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQ 115
             L YEA +RLRDPVYGC+G IS LQ +++ LQ +L+  +SE+ KY+
Sbjct:   105 LVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYK 149

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2065769 LBD13 "AT2G30340" [Arabidopsis thaliana (taxid:3702)]

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 67/107 (62%), Positives = 83/107 (77%)

Query:    11 PCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDAVNS 70
             PCAACKLLRR+C  EC F+PYF P +P KFA VHKVFGASNV+K+L E+  SQR DA NS
Sbjct:    52 PCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANS 111

Query:    71 LAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSEL--SKYQ 115
             L YEA +RLRDP+YGC+G IS LQH ++ LQ +L+  ++E+   KYQ
Sbjct:   112 LVYEANLRLRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQ 158

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IDA

TAIR|locus:2197500 LBD4 "LOB domain-containing protein 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 66/101 (65%), Positives = 81/101 (80%)

Query:    11 PCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDAVNS 70
             PCAACKLLRR+C  +CVF+PYFP D+PQKFANVH+VFGASNV K+L EL   QR DAV+S
Sbjct:    13 PCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSS 72

Query:    71 LAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSEL 111
             + YEA  R+RDPVYGCVG IS LQ ++  LQ  L+ A++E+
Sbjct:    73 MVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEV 113

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8LQH4	LBD6_ORYSJ	No assigned EC number	0.8148	0.4843	0.4014	yes	no
O04479	LBD6_ARATH	No assigned EC number	0.7008	0.8699	0.9748	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00009328001 SubName- Full=Chromosome undetermined scaffold_229, whole genome shotgun sequence; (208 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	223
pfam03195	101	pfam03195, DUF260, Protein of unknown function DUF	2e-55

>gnl|CDD|190559 pfam03195, DUF260, Protein of unknown function DUF260

 Score =  171 bits (436), Expect = 2e-55
 Identities = 69/101 (68%), Positives = 81/101 (80%)

Query: 11  PCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDAVNS 70
           PCAACK LRRKC P+CV APYFP +QP +FANVHK+FGASNVTKLL  L P QR+DA+ S
Sbjct: 1   PCAACKHLRRKCPPDCVLAPYFPAEQPARFANVHKLFGASNVTKLLKALPPEQRDDAMRS 60

Query: 71  LAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSEL 111
           L YEA+ R RDPVYGCVGVI  LQ +L QLQ +L+  K++L
Sbjct: 61  LLYEADARARDPVYGCVGVIWSLQQQLEQLQAELALVKAQL 101

Length = 101

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	223
PF03195	101	DUF260: Protein of unknown function DUF260; InterP	100.0
COG3416	233	Uncharacterized protein conserved in bacteria [Fun	82.32

>PF03195 DUF260: Protein of unknown function DUF260; InterPro: IPR004883 The lateral organ boundaries (LOB) gene is expressed at the adaxial base of initiating lateral organs and encodes a plant-specific protein of unknown function

Probab=100.00  E-value=6.1e-50  Score=313.09  Aligned_cols=101  Identities=67%  Similarity=1.221  Sum_probs=99.8

Q ss_pred             CChhhhhhhcCCCCCCcCCCCCCCCCchhHHHHHHhhchhhHHHHHhhcCCcchHHHHHHHHHHHhhhccCCCCcchHHH
Q 027472           11 PCAACKLLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPSQREDAVNSLAYEAEMRLRDPVYGCVGVI   90 (223)
Q Consensus        11 ~CAACK~lRRkC~~~CilAPYFPadq~~~F~~vhkvFG~sNV~kmL~~lpp~qR~dA~~SLvYEA~aR~rDPVyGCvGiI   90 (223)
                      +|||||+|||||+++|+||||||++++++|++||||||++||+|||+++||++|+++|+||+|||++|.+||||||+|+|
T Consensus         1 ~CaaCk~lRr~C~~~C~laPyFP~~~~~~F~~vhkvFG~sni~k~L~~~~~~~R~~a~~Sl~yEA~~R~~dPv~Gc~G~i   80 (101)
T PF03195_consen    1 PCAACKHLRRRCSPDCVLAPYFPADQPQRFANVHKVFGVSNISKMLQELPPEQREDAMRSLVYEANARARDPVYGCVGII   80 (101)
T ss_pred             CChHHHHHhCCCCCCCcCCCCCChhHHHHHHHHHHHHchhHHHHHHHhCCccchhhHHHHHHHHHHhhccCCCcchHHHH
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHH
Q 027472           91 SFLQHRLRQLQMDLSCAKSEL  111 (223)
Q Consensus        91 ~~Lq~QL~~lq~eLa~aq~eL  111 (223)
                      |.|+|||+++++||+.+++||
T Consensus        81 ~~L~~ql~~~~~el~~~~~~l  101 (101)
T PF03195_consen   81 SQLQQQLQQLQAELALVRAQL  101 (101)
T ss_pred             HHHHHHHHHHHHHHHHHHccC
Confidence            999999999999999999886

The N-terminal one half of the LOB protein contains a conserved approximately 100-amino acid domain (the LOB domain) that is present in 42 other Arabidopsis thaliana proteins and in proteins from a variety of other plant species. Genes encoding LOB domain (LBD) proteins are expressed in a variety of temporal- and tissue-specific patterns, suggesting that they may function in diverse processes [] The LOB domain contains conserved blocks of amino acids that identify the LBD gene family. In particular, a conserved C-x(2)-C-x(6)-C-x(3)-C motif, which is defining feature of the LOB domain, is present in all LBD proteins. It is possible that this motif forms a new zinc finger [].

>COG3416 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=82.32  E-value=4.1  Score=37.01  Aligned_cols=67  Identities=15%  Similarity=0.197  Sum_probs=60.0

Q ss_pred             hHHHHHhhcCCcchHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 027472           51 NVTKLLNELQPSQREDAVNSLAYEAEMRLRDPVYGCVGVISFLQHRLRQLQMDLSCAKSELSKYQNL  117 (223)
Q Consensus        51 NV~kmL~~lpp~qR~dA~~SLvYEA~aR~rDPVyGCvGiI~~Lq~QL~~lq~eLa~aq~eLa~y~~~  117 (223)
                      |+..-|+......|+..++.||-|+-++.-|--|=-+-.|..+++-|+.++.+|+.++.+|+..+..
T Consensus        11 ~lf~rlk~a~~~~rD~~Ae~lI~~~~~~qP~a~Y~laQ~vliqE~ALk~a~~~i~eLe~ri~~lq~~   77 (233)
T COG3416          11 NLFHRLKKAEANERDPQAEALIAEAVAKQPDAAYYLAQRVLIQEQALKKASTQIKELEKRIAILQAG   77 (233)
T ss_pred             HHHHHHhhcccCCCChHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            4445567777789999999999999999999999999999999999999999999999999988774

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00