Citrus Sinensis ID: 027596
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 221 | ||||||
| 225452839 | 214 | PREDICTED: uncharacterized protein LOC10 | 0.945 | 0.976 | 0.778 | 9e-96 | |
| 255562880 | 221 | conserved hypothetical protein [Ricinus | 0.995 | 0.995 | 0.75 | 2e-88 | |
| 357501905 | 218 | hypothetical protein MTR_7g010890 [Medic | 0.981 | 0.995 | 0.698 | 2e-86 | |
| 449457987 | 214 | PREDICTED: uncharacterized protein LOC10 | 0.941 | 0.971 | 0.733 | 4e-86 | |
| 357487595 | 218 | hypothetical protein MTR_5g044580 [Medic | 0.981 | 0.995 | 0.702 | 4e-86 | |
| 224101355 | 234 | predicted protein [Populus trichocarpa] | 0.990 | 0.935 | 0.692 | 6e-86 | |
| 224109008 | 234 | predicted protein [Populus trichocarpa] | 0.986 | 0.931 | 0.676 | 1e-83 | |
| 356569808 | 214 | PREDICTED: uncharacterized protein LOC10 | 0.954 | 0.985 | 0.678 | 4e-80 | |
| 356569815 | 214 | PREDICTED: uncharacterized protein LOC10 | 0.950 | 0.981 | 0.666 | 4e-76 | |
| 79317444 | 243 | uncharacterized protein [Arabidopsis tha | 1.0 | 0.909 | 0.596 | 5e-72 |
| >gi|225452839|ref|XP_002278425.1| PREDICTED: uncharacterized protein LOC100243883 [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 355 bits (910), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 176/226 (77%), Positives = 195/226 (86%), Gaps = 17/226 (7%)
Query: 1 MEQHQEGIGIKIYNATPPEGS-----TPRMADALPAEPSSGVHQPGRKRRAVAKGVQKTI 55
MEQ E +GIK+YNATP E S +PR+A +PGRKRRAVAKGVQKT+
Sbjct: 1 MEQ-LEDLGIKVYNATPQEASPCPSSSPRLAP-----------EPGRKRRAVAKGVQKTL 48
Query: 56 SKTSMLVNFLPTGTLLTFEMILPSVYGNGECSPVNTLMIHVLLGLCALSCFFFHFTDSFR 115
SKTSMLVNFLPTGTLLTFEM+LPS+Y NGECS V+ LMIH+LLGLC LSCFFFHFTD FR
Sbjct: 49 SKTSMLVNFLPTGTLLTFEMVLPSIYRNGECSSVSILMIHMLLGLCCLSCFFFHFTDGFR 108
Query: 116 GPDGKVYYGFVTPRGLAVFKPGLEVEVPKEERYKVGLTDFVHAMMSVMVFVAIAFSDFRV 175
GPDGKVYYGFVT +GLAVFKPGLEVEVPK+ER+KVGLTDFVHA MSVMVF+AIAFSD R+
Sbjct: 109 GPDGKVYYGFVTTKGLAVFKPGLEVEVPKDERFKVGLTDFVHATMSVMVFIAIAFSDHRI 168
Query: 176 TRCLFPGHEKEMDQVMESFPLMVGVICSGLFLVFPNTRYGIGCMAA 221
T CLFPGHEK+MD+VMESFPLMVG++CSGLFLVFPNTRYGIGCMAA
Sbjct: 169 TDCLFPGHEKDMDEVMESFPLMVGIVCSGLFLVFPNTRYGIGCMAA 214
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255562880|ref|XP_002522445.1| conserved hypothetical protein [Ricinus communis] gi|223538330|gb|EEF39937.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|357501905|ref|XP_003621241.1| hypothetical protein MTR_7g010890 [Medicago truncatula] gi|355496256|gb|AES77459.1| hypothetical protein MTR_7g010890 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|449457987|ref|XP_004146729.1| PREDICTED: uncharacterized protein LOC101222659 [Cucumis sativus] gi|449525279|ref|XP_004169645.1| PREDICTED: uncharacterized protein LOC101228440 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|357487595|ref|XP_003614085.1| hypothetical protein MTR_5g044580 [Medicago truncatula] gi|355515420|gb|AES97043.1| hypothetical protein MTR_5g044580 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|224101355|ref|XP_002312247.1| predicted protein [Populus trichocarpa] gi|222852067|gb|EEE89614.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224109008|ref|XP_002315049.1| predicted protein [Populus trichocarpa] gi|222864089|gb|EEF01220.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356569808|ref|XP_003553088.1| PREDICTED: uncharacterized protein LOC100802901 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356569815|ref|XP_003553091.1| PREDICTED: uncharacterized protein LOC100806096 [Glycine max] | Back alignment and taxonomy information |
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| >gi|79317444|ref|NP_001031010.1| uncharacterized protein [Arabidopsis thaliana] gi|3249106|gb|AAC24089.1| T12M4.16 [Arabidopsis thaliana] gi|98961961|gb|ABF59310.1| unknown protein [Arabidopsis thaliana] gi|332190283|gb|AEE28404.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 221 | ||||||
| TAIR|locus:2164850 | 244 | DAU2 "AT5G39650" [Arabidopsis | 0.990 | 0.897 | 0.632 | 3.1e-76 | |
| TAIR|locus:1009023066 | 243 | AT1G09157 "AT1G09157" [Arabido | 0.995 | 0.905 | 0.615 | 3.1e-74 | |
| TAIR|locus:2135952 | 213 | AT4G24310 "AT4G24310" [Arabido | 0.832 | 0.863 | 0.423 | 2.8e-34 | |
| TAIR|locus:2076894 | 219 | AT3G02430 "AT3G02430" [Arabido | 0.923 | 0.931 | 0.371 | 1.5e-33 | |
| TAIR|locus:2161393 | 214 | AT5G46090 "AT5G46090" [Arabido | 0.764 | 0.789 | 0.378 | 4.9e-30 | |
| TAIR|locus:505006493 | 213 | AT4G18425 "AT4G18425" [Arabido | 0.773 | 0.802 | 0.374 | 6.2e-30 | |
| TAIR|locus:2146380 | 191 | AT5G27370 "AT5G27370" [Arabido | 0.737 | 0.853 | 0.417 | 2.7e-29 | |
| TAIR|locus:2089865 | 184 | DMP2 "AT3G21550" [Arabidopsis | 0.723 | 0.869 | 0.381 | 1.1e-25 | |
| TAIR|locus:2089915 | 207 | DMP1 "AT3G21520" [Arabidopsis | 0.728 | 0.777 | 0.367 | 1.8e-25 | |
| TAIR|locus:504955516 | 165 | DMP7 "AT4G28485" [Arabidopsis | 0.429 | 0.575 | 0.431 | 5.1e-19 |
| TAIR|locus:2164850 DAU2 "AT5G39650" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 153/242 (63%), Positives = 187/242 (77%)
Query: 1 MEQHQEGIGIKIYNATPPEGSTPR---------MADALPAEPSSGVHQPGR--KRRAVAK 49
ME+ +E +GI++Y ATPP+ +P + +LP+ PS GR KRR VA+
Sbjct: 1 MEKTEESVGIRVYTATPPQKPSPSPPSRSPKPVLISSLPSLPSGAAAGGGRGRKRRMVAQ 60
Query: 50 GVQKTISKTSMLVNFLPTGTLLTFEMILPSVYGNGECSPVNTLMIHVLLGLCALSCFFFH 109
GVQKT+SKTSMLVNFLPTGTLL FEM+LPS+Y +G+C+ +NTLMIH+LL LCA+SCFFFH
Sbjct: 61 GVQKTVSKTSMLVNFLPTGTLLMFEMVLPSIYRDGDCNGINTLMIHLLLLLCAMSCFFFH 120
Query: 110 FTDSFRGPDGKVYYGFVTPRGLAVF-KP------G----LEVEVP-KEERYKVGLTDFVH 157
FTDSF+ DGK+YYGFVTPRGLAVF KP G E E+P ++RYK+ + DFVH
Sbjct: 121 FTDSFKASDGKIYYGFVTPRGLAVFMKPPPPEFGGGDVIAEAEIPVTDDRYKLTVNDFVH 180
Query: 158 AMMSVMVFVAIAFSDFRVTRCLFPGHEKEMDQVMESFPLMVGVICSGLFLVFPNTRYGIG 217
A+MSV+VF+AIAFSD RVT CLFPG EKEMDQVMESFP+MVG++CS LFLVFP TRYG+G
Sbjct: 181 AVMSVLVFMAIAFSDRRVTGCLFPGKEKEMDQVMESFPIMVGIVCSALFLVFPTTRYGVG 240
Query: 218 CM 219
CM
Sbjct: 241 CM 242
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| TAIR|locus:1009023066 AT1G09157 "AT1G09157" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2135952 AT4G24310 "AT4G24310" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2076894 AT3G02430 "AT3G02430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2161393 AT5G46090 "AT5G46090" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:505006493 AT4G18425 "AT4G18425" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2146380 AT5G27370 "AT5G27370" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2089865 DMP2 "AT3G21550" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2089915 DMP1 "AT3G21520" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:504955516 DMP7 "AT4G28485" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 221 | |||
| pfam05078 | 169 | pfam05078, DUF679, Protein of unknown function (DU | 1e-75 |
| >gnl|CDD|147322 pfam05078, DUF679, Protein of unknown function (DUF679) | Back alignment and domain information |
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Score = 225 bits (575), Expect = 1e-75
Identities = 82/168 (48%), Positives = 108/168 (64%), Gaps = 5/168 (2%)
Query: 56 SKTSMLVNFLPTGTLLTFEMILPSVYGNGECSPVNTLMIHVLLGLCALSCFFFHFTDSFR 115
S T+ L LPTGT+L F+ + PS +GEC N ++ L+ LCA SCFFF FTDS+
Sbjct: 2 SSTANLAKLLPTGTVLAFQALSPSFTNHGECDAANRVLTAALVALCAASCFFFSFTDSYV 61
Query: 116 GPDGKVYYGFVTPRGLAVF-----KPGLEVEVPKEERYKVGLTDFVHAMMSVMVFVAIAF 170
GPDGKVYYG TPRGL VF + G ++ RY++ DFVHA SV+VF+A+A
Sbjct: 62 GPDGKVYYGVATPRGLWVFNYEGGRGGGDLPQRDLSRYRLRFLDFVHAFFSVLVFLAVAL 121
Query: 171 SDFRVTRCLFPGHEKEMDQVMESFPLMVGVICSGLFLVFPNTRYGIGC 218
SD V C +PG +E +V+ + PL VGV+ S +F+VFP TR+GIG
Sbjct: 122 SDANVVSCFYPGPGEETKEVLTNLPLGVGVVSSFVFMVFPTTRHGIGY 169
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This family contains several uncharacterized plant proteins. Length = 169 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 221 | |||
| PF05078 | 170 | DUF679: Protein of unknown function (DUF679); Inte | 100.0 |
| >PF05078 DUF679: Protein of unknown function (DUF679); InterPro: IPR007770 This family contains uncharacterised plant proteins of unknown function | Back alignment and domain information |
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Probab=100.00 E-value=1.1e-85 Score=555.24 Aligned_cols=164 Identities=52% Similarity=0.970 Sum_probs=159.2
Q ss_pred hhhhhhhhccCCchhHHHHHhhcccccCCCcccchhHHHHHHHHHHhhhhhhceecccceecCCCcEEEEEeeccceeee
Q 027596 55 ISKTSMLVNFLPTGTLLTFEMILPSVYGNGECSPVNTLMIHVLLGLCALSCFFFHFTDSFRGPDGKVYYGFVTPRGLAVF 134 (221)
Q Consensus 55 lssta~La~LLPTGTvLaFQ~LsP~~TN~G~C~~~nr~Lt~~Ll~lca~sCff~sFTDS~~~~dGkvyYG~aT~~Glw~f 134 (221)
|+++|||+|||||||||+||+|+|++||||+|+++|||||++||++||+||||+||||||+|+|||+|||+||+||||+|
T Consensus 1 ls~ta~La~LLPTGTvlaFq~L~P~~Tn~G~C~~~nr~lt~~Ll~lca~sC~f~sFTDS~~~~dGkvyYG~aT~~Gl~~f 80 (170)
T PF05078_consen 1 LSSTANLAKLLPTGTVLAFQILSPSFTNNGECDTANRWLTAALLALCAASCFFFSFTDSFRGSDGKVYYGFATPRGLWVF 80 (170)
T ss_pred CccHHHHHHhCcchHHHHHHHhhhhcccCCccCcchHHHHHHHHHHHHHHHHHeeecceeECCCCCEEEEEEEcccceec
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C------CCCCCCCCccccceeeecchhhhHHHHHHHHHHHhccCCcceeeCCCCchhHHHHHHhhchHHHhhhheeeeE
Q 027596 135 K------PGLEVEVPKEERYKVGLTDFVHAMMSVMVFVAIAFSDFRVTRCLFPGHEKEMDQVMESFPLMVGVICSGLFLV 208 (221)
Q Consensus 135 ~------~~~~~~~~~~s~yrLr~~DfvHA~lS~~VF~avAl~D~nvv~Cf~P~~~~~~~evl~~lPl~vG~~~S~lF~i 208 (221)
| ++.+.++++++|||||++|||||+||++||++||++|+|||+||||++++|+||+|+++|++||++||+|||+
T Consensus 81 ~~~~~~~g~~~~~~~~~~~yrlr~~DfvHA~lS~~VF~aval~d~~v~~Cf~P~~~~~~~~~l~~lP~~vG~~~S~vF~~ 160 (170)
T PF05078_consen 81 NYPGPEEGGGELKPRDLSKYRLRFIDFVHAFLSVVVFLAVALSDQNVVSCFFPSPSSETKEVLMNLPLGVGVLCSMVFMI 160 (170)
T ss_pred CCCCccccccCCCccccccceEehhhhhHHHHHHHHHHHhheeCCCcceecCCCCchhHHHHHHHhHHHHHHhHeeEEEE
Confidence 9 3444566799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccCC
Q 027596 209 FPNTRYGIGC 218 (221)
Q Consensus 209 FPt~RhGIGy 218 (221)
|||+||||||
T Consensus 161 FPt~R~GIGy 170 (170)
T PF05078_consen 161 FPTTRHGIGY 170 (170)
T ss_pred CCCCCCCCCC
Confidence 9999999998
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00