Citrus Sinensis ID: 027710

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
MSNHLGTAGSNNSGGPPVALNERILSSMSHRSVAAHPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLYASYIVESLRQ
ccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccEEEEEEEEcccccccEEEEcccccEEEEEEcccccccccccccccccccccccccEEEEEcccccccccEEEEEEEEEEEEEcccccccEEEEEEccccccccccccccccHHHHHHHHHHHHHHccccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHcc
cccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccEEEEEEEcccccEEEEEEccccEEEEEEEcccccccccEEEEccccccccccccEEEEEcccccccccEEEEEEEEEEEEEEcccEEEEEEEEEcccHHHcccccHHHccHHHHHHHHHHHHHccHHHHHHEEEcccccHHHHHHHHHHHHHHHHHHHHHHHcc
msnhlgtagsnnsggppvaLNERILSsmshrsvaahpwhdleigpgapavcnCCKSLRQVVEIGKGGKVKYELDkasglikvdRVLYSSvvyphnygfiprticedsdpmDVLVLMqepvlpgsflrcraiglmpmidqgekddKIIAvcaddpefrhykdikelpphRLAEIRRFFEDYKknenkkvdvedflPAEAAIEAIKYSMDLYASYIVESLRQ
msnhlgtagsnnsggppVALNERILSSMSHRSVAAHPWHDLEIGPGAPAVCNCCKSLRQVVEigkggkvkyeldkasglikvDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPmidqgekdDKIIAVCADDPEFrhykdikelpphrLAEIRRFFEdykknenkkvdvedflPAEAAIEAIKYSMDLYASYIVESLRQ
MSNHLGTAGSNNSGGPPVALNERILSSMSHRSVAAHPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLYASYIVESLRQ
********************************VAAHPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLYASYIV*****
************************LSSMSHRSVAAHPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLYASYIV*****
*************GGPPVALNERILSSMSHRSVAAHPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLYASYIVESLRQ
****************PVAL***ILSSMSHRSVAAHPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLYASYIVESLRQ
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SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSNHLGTAGSNNSGGPPVALNERILSSMSHRSVAAHPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLYASYIVESLRQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query220 2.2.26 [Sep-21-2011]
P21216218 Soluble inorganic pyropho yes no 0.909 0.917 0.830 4e-96
Q0DYB1214 Soluble inorganic pyropho yes no 0.904 0.929 0.824 9e-96
A2X8Q3214 Soluble inorganic pyropho N/A no 0.904 0.929 0.824 9e-96
O48556214 Soluble inorganic pyropho N/A no 0.972 1.0 0.768 4e-94
Q43187211 Soluble inorganic pyropho N/A no 0.886 0.924 0.805 4e-92
O23979215 Soluble inorganic pyropho N/A no 0.940 0.962 0.739 2e-85
Q949J1192 Soluble inorganic pyropho N/A no 0.818 0.937 0.623 4e-64
Q8EZ21178 Inorganic pyrophosphatase yes no 0.772 0.955 0.494 8e-44
Q72MG4178 Inorganic pyrophosphatase yes no 0.772 0.955 0.494 8e-44
O26363176 Inorganic pyrophosphatase yes no 0.786 0.982 0.491 9e-41
>sp|P21216|IPYR2_ARATH Soluble inorganic pyrophosphatase 2 OS=Arabidopsis thaliana GN=PPA2 PE=2 SV=2 Back     alignment and function desciption
 Score =  350 bits (898), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 171/206 (83%), Positives = 181/206 (87%), Gaps = 6/206 (2%)

Query: 15  GPPVALNERILSSMSHRSVAAHPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELD 74
            P V LNER  ++ +HRS AAHPWHDLEIGP AP V NC      VVEI KGGKVKYELD
Sbjct: 19  NPNVTLNERNFAAFTHRSAAAHPWHDLEIGPEAPTVFNC------VVEISKGGKVKYELD 72

Query: 75  KASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLM 134
           K SGLIKVDRVLYSS+VYPHNYGFIPRTICEDSDPMDVLVLMQEPVL GSFLR RAIGLM
Sbjct: 73  KNSGLIKVDRVLYSSIVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLTGSFLRARAIGLM 132

Query: 135 PMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFL 194
           PMIDQGEKDDKIIAVCADDPEFRHY+DIKELPPHRLAEIRRFFEDYKKNENKKVDVE FL
Sbjct: 133 PMIDQGEKDDKIIAVCADDPEFRHYRDIKELPPHRLAEIRRFFEDYKKNENKKVDVEAFL 192

Query: 195 PAEAAIEAIKYSMDLYASYIVESLRQ 220
           PA+AAI+AIK SMDLYA+YI   L++
Sbjct: 193 PAQAAIDAIKDSMDLYAAYIKAGLQR 218

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 6EC: .EC: 1EC: .EC: 1
>sp|Q0DYB1|IPYR_ORYSJ Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. japonica GN=IPP PE=2 SV=1 Back     alignment and function description
>sp|A2X8Q3|IPYR_ORYSI Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. indica GN=IPP PE=2 SV=1 Back     alignment and function description
>sp|O48556|IPYR_MAIZE Soluble inorganic pyrophosphatase OS=Zea mays GN=IPP PE=2 SV=1 Back     alignment and function description
>sp|Q43187|IPYR_SOLTU Soluble inorganic pyrophosphatase OS=Solanum tuberosum GN=PPA PE=2 SV=1 Back     alignment and function description
>sp|O23979|IPYR_HORVD Soluble inorganic pyrophosphatase OS=Hordeum vulgare var. distichum GN=IPP PE=2 SV=1 Back     alignment and function description
>sp|Q949J1|IPYR2_CHLRE Soluble inorganic pyrophosphatase 2 OS=Chlamydomonas reinhardtii GN=ppa2 PE=1 SV=1 Back     alignment and function description
>sp|Q8EZ21|IPYR_LEPIN Inorganic pyrophosphatase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) GN=ppa PE=3 SV=1 Back     alignment and function description
>sp|Q72MG4|IPYR_LEPIC Inorganic pyrophosphatase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) GN=ppa PE=3 SV=1 Back     alignment and function description
>sp|O26363|IPYR_METTH Inorganic pyrophosphatase OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=ppa PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query220
449451549239 PREDICTED: soluble inorganic pyrophospha 0.972 0.895 0.868 1e-106
359476682215 PREDICTED: soluble inorganic pyrophospha 0.972 0.995 0.864 1e-105
388515711216 unknown [Lotus japonicus] 0.968 0.986 0.858 1e-104
255561090212 inorganic pyrophosphatase, putative [Ric 0.963 1.0 0.872 1e-104
118484220220 unknown [Populus trichocarpa] 0.968 0.968 0.854 1e-103
224094817213 predicted protein [Populus trichocarpa] 0.968 1.0 0.854 1e-103
118489670212 unknown [Populus trichocarpa x Populus d 0.945 0.981 0.865 1e-102
351727729213 uncharacterized protein LOC100306258 [Gl 0.968 1.0 0.845 1e-102
388504010216 unknown [Medicago truncatula] 0.968 0.986 0.831 1e-101
357483543213 Soluble inorganic pyrophosphatase [Medic 0.968 1.0 0.831 1e-101
>gi|449451549|ref|XP_004143524.1| PREDICTED: soluble inorganic pyrophosphatase-like [Cucumis sativus] gi|449522764|ref|XP_004168396.1| PREDICTED: soluble inorganic pyrophosphatase-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  389 bits (998), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/220 (86%), Positives = 198/220 (90%), Gaps = 6/220 (2%)

Query: 1   MSNHLGTAGSNNSGGPPVALNERILSSMSHRSVAAHPWHDLEIGPGAPAVCNCCKSLRQV 60
           M N  G   S N G P + LNERILSS+S RSVAAHPWHDLEIGPGAP+V NC      V
Sbjct: 26  MENSAGGGSSANMGFPRIRLNERILSSLSRRSVAAHPWHDLEIGPGAPSVFNC------V 79

Query: 61  VEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPV 120
           VEIGKG KVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPV
Sbjct: 80  VEIGKGSKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPV 139

Query: 121 LPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDY 180
           LPGSFLR RAIGLMPMIDQGE+DDKIIAVCADDPEFRHY DIKE+PPHRLAEIRRFFEDY
Sbjct: 140 LPGSFLRARAIGLMPMIDQGERDDKIIAVCADDPEFRHYTDIKEIPPHRLAEIRRFFEDY 199

Query: 181 KKNENKKVDVEDFLPAEAAIEAIKYSMDLYASYIVESLRQ 220
           KKNENKKVDVEDFLPAEAAI+AIKYSMDLYA+YIVESLRQ
Sbjct: 200 KKNENKKVDVEDFLPAEAAIDAIKYSMDLYAAYIVESLRQ 239

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359476682|ref|XP_002264695.2| PREDICTED: soluble inorganic pyrophosphatase-like [Vitis vinifera] gi|297735129|emb|CBI17491.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|388515711|gb|AFK45917.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|255561090|ref|XP_002521557.1| inorganic pyrophosphatase, putative [Ricinus communis] gi|223539235|gb|EEF40828.1| inorganic pyrophosphatase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|118484220|gb|ABK93990.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224094817|ref|XP_002310249.1| predicted protein [Populus trichocarpa] gi|222853152|gb|EEE90699.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118489670|gb|ABK96636.1| unknown [Populus trichocarpa x Populus deltoides] Back     alignment and taxonomy information
>gi|351727729|ref|NP_001236147.1| uncharacterized protein LOC100306258 [Glycine max] gi|255628027|gb|ACU14358.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|388504010|gb|AFK40071.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|357483543|ref|XP_003612058.1| Soluble inorganic pyrophosphatase [Medicago truncatula] gi|355513393|gb|AES95016.1| Soluble inorganic pyrophosphatase [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query220
TAIR|locus:2062195218 PPa2 "pyrophosphorylase 2" [Ar 0.904 0.912 0.834 3.2e-88
TAIR|locus:2084066216 PPa4 "pyrophosphorylase 4" [Ar 0.886 0.902 0.810 1.8e-87
TAIR|locus:2200965212 PPa1 "pyrophosphorylase 1" [Ar 0.904 0.938 0.785 8.9e-86
TAIR|locus:2041424216 PPa3 "pyrophosphorylase 3" [Ar 0.945 0.962 0.766 3.4e-84
TAIR|locus:2116997216 PPa5 "pyrophosphorylase 5" [Ar 0.904 0.921 0.760 4.5e-82
UNIPROTKB|Q949J1192 ppa2 "Soluble inorganic pyroph 0.836 0.958 0.617 2.7e-61
TIGR_CMR|DET_0367211 DET_0367 "inorganic pyrophosph 0.7 0.729 0.435 4.9e-30
TIGR_CMR|CJE_0741172 CJE_0741 "inorganic pyrophosph 0.7 0.895 0.426 1.5e-28
UNIPROTKB|P65746162 ppa "Inorganic pyrophosphatase 0.677 0.919 0.401 1.2e-26
UNIPROTKB|P0A7A9176 ppa [Escherichia coli K-12 (ta 0.731 0.914 0.406 1.8e-25
TAIR|locus:2062195 PPa2 "pyrophosphorylase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
 Identities = 171/205 (83%), Positives = 181/205 (88%)

Query:    16 PPVALNERILSSMSHRSVAAHPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDK 75
             P V LNER  ++ +HRS AAHPWHDLEIGP AP V NC      VVEI KGGKVKYELDK
Sbjct:    20 PNVTLNERNFAAFTHRSAAAHPWHDLEIGPEAPTVFNC------VVEISKGGKVKYELDK 73

Query:    76 ASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMP 135
              SGLIKVDRVLYSS+VYPHNYGFIPRTICEDSDPMDVLVLMQEPVL GSFLR RAIGLMP
Sbjct:    74 NSGLIKVDRVLYSSIVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLTGSFLRARAIGLMP 133

Query:   136 MIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLP 195
             MIDQGEKDDKIIAVCADDPEFRHY+DIKELPPHRLAEIRRFFEDYKKNENKKVDVE FLP
Sbjct:   134 MIDQGEKDDKIIAVCADDPEFRHYRDIKELPPHRLAEIRRFFEDYKKNENKKVDVEAFLP 193

Query:   196 AEAAIEAIKYSMDLYASYIVESLRQ 220
             A+AAI+AIK SMDLYA+YI   L++
Sbjct:   194 AQAAIDAIKDSMDLYAAYIKAGLQR 218
GO:0000287 "magnesium ion binding" evidence=IEA
GO:0004427 "inorganic diphosphatase activity" evidence=IEA;NAS
GO:0005737 "cytoplasm" evidence=ISM;IEA
GO:0006796 "phosphate-containing compound metabolic process" evidence=IEA
GO:0008152 "metabolic process" evidence=ISS
GO:0016020 "membrane" evidence=ISS
GO:0016462 "pyrophosphatase activity" evidence=ISS
TAIR|locus:2084066 PPa4 "pyrophosphorylase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200965 PPa1 "pyrophosphorylase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2041424 PPa3 "pyrophosphorylase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116997 PPa5 "pyrophosphorylase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q949J1 ppa2 "Soluble inorganic pyrophosphatase 2" [Chlamydomonas reinhardtii (taxid:3055)] Back     alignment and assigned GO terms
TIGR_CMR|DET_0367 DET_0367 "inorganic pyrophosphatase" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
TIGR_CMR|CJE_0741 CJE_0741 "inorganic pyrophosphatase" [Campylobacter jejuni RM1221 (taxid:195099)] Back     alignment and assigned GO terms
UNIPROTKB|P65746 ppa "Inorganic pyrophosphatase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
UNIPROTKB|P0A7A9 ppa [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q43187IPYR_SOLTU3, ., 6, ., 1, ., 10.80590.88630.9241N/Ano
O48556IPYR_MAIZE3, ., 6, ., 1, ., 10.76810.97271.0N/Ano
P21216IPYR2_ARATH3, ., 6, ., 1, ., 10.83000.90900.9174yesno
O23979IPYR_HORVD3, ., 6, ., 1, ., 10.73950.94090.9627N/Ano
Q0DYB1IPYR_ORYSJ3, ., 6, ., 1, ., 10.82430.90450.9299yesno
Q949J1IPYR2_CHLRE3, ., 6, ., 1, ., 10.62360.81810.9375N/Ano
A2X8Q3IPYR_ORYSI3, ., 6, ., 1, ., 10.82430.90450.9299N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.6.1.10.979
3rd Layer3.6.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00024902001
SubName- Full=Chromosome chr4 scaffold_32, whole genome shotgun sequence; (232 aa)
(Vitis vinifera)
Predicted Functional Partners:
atpA
RecName- Full=ATP synthase subunit alpha; Short=ATPase subunit alpha; EC=3.6.3.14; AltName- Ful [...] (507 aa)
     •• 0.919
atp1
RecName- Full=ATP synthase subunit alpha;; Produces ATP from ADP in the presence of a proton gr [...] (495 aa)
     •• 0.918
GSVIVG00029622001
SubName- Full=Chromosome chr9 scaffold_49, whole genome shotgun sequence; (623 aa)
     •• 0.917
GSVIVG00032341001
SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (629 aa)
     •• 0.916
GSVIVG00036158001
SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (488 aa)
     •• 0.906
GSVIVG00030440001
RecName- Full=ATP synthase subunit beta; EC=3.6.3.14;; Produces ATP from ADP in the presence of [...] (560 aa)
     •• 0.906
GSVIVG00015498001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (509 aa)
     •• 0.905
GSVIVG00017772001
RecName- Full=ATP synthase subunit beta; EC=3.6.3.14;; Produces ATP from ADP in the presence of [...] (554 aa)
     •• 0.905
GSVIVG00038692001
SubName- Full=Chromosome chr18 scaffold_96, whole genome shotgun sequence; (110 aa)
     •  0.899
GSVIVG00038691001
SubName- Full=Chromosome chr18 scaffold_96, whole genome shotgun sequence; (134 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query220
PLN02373188 PLN02373, PLN02373, soluble inorganic pyrophosphat 1e-147
cd00412155 cd00412, pyrophosphatase, Inorganic pyrophosphatas 5e-83
pfam00719156 pfam00719, Pyrophosphatase, Inorganic pyrophosphat 3e-78
COG0221171 COG0221, Ppa, Inorganic pyrophosphatase [Energy pr 2e-62
PRK01250176 PRK01250, PRK01250, inorganic pyrophosphatase; Pro 7e-52
PRK02230184 PRK02230, PRK02230, inorganic pyrophosphatase; Pro 9e-51
PRK00642205 PRK00642, PRK00642, inorganic pyrophosphatase; Pro 2e-45
PLN02707267 PLN02707, PLN02707, Soluble inorganic pyrophosphat 6e-18
>gnl|CDD|178001 PLN02373, PLN02373, soluble inorganic pyrophosphatase Back     alignment and domain information 
 Score =  407 bits (1048), Expect = e-147
 Identities = 168/194 (86%), Positives = 177/194 (91%), Gaps = 6/194 (3%)

Query: 27  SMSHRSVAAHPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVL 86
           SMS RSVAAHPWHDLEIGPGAPA+ NC      VVEI KG KVKYELDK +GLIKVDRVL
Sbjct: 1   SMSRRSVAAHPWHDLEIGPGAPAIFNC------VVEITKGSKVKYELDKKTGLIKVDRVL 54

Query: 87  YSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKI 146
           YSSVVYPHNYGFIPRT+CED+DP+DVLVLMQEPVLPG FLR RAIGLMPMIDQGEKDDKI
Sbjct: 55  YSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKI 114

Query: 147 IAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYS 206
           IAVCADDPE+RHY DIKELPPHRLAEIRRFFEDYKKNENK+V V DFLPAEAAIEAI+YS
Sbjct: 115 IAVCADDPEYRHYTDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPAEAAIEAIQYS 174

Query: 207 MDLYASYIVESLRQ 220
           MDLYA YIVESLR+
Sbjct: 175 MDLYAEYIVESLRR 188

Length = 188
>gnl|CDD|238239 cd00412, pyrophosphatase, Inorganic pyrophosphatase Back     alignment and domain information
>gnl|CDD|189686 pfam00719, Pyrophosphatase, Inorganic pyrophosphatase Back     alignment and domain information
>gnl|CDD|223299 COG0221, Ppa, Inorganic pyrophosphatase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|179262 PRK01250, PRK01250, inorganic pyrophosphatase; Provisional Back     alignment and domain information
>gnl|CDD|179388 PRK02230, PRK02230, inorganic pyrophosphatase; Provisional Back     alignment and domain information
>gnl|CDD|179080 PRK00642, PRK00642, inorganic pyrophosphatase; Provisional Back     alignment and domain information
>gnl|CDD|178309 PLN02707, PLN02707, Soluble inorganic pyrophosphatase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 220
PLN02373188 soluble inorganic pyrophosphatase 100.0
PRK00642205 inorganic pyrophosphatase; Provisional 100.0
PRK01250176 inorganic pyrophosphatase; Provisional 100.0
PLN02707267 Soluble inorganic pyrophosphatase 100.0
PRK02230184 inorganic pyrophosphatase; Provisional 100.0
cd00412155 pyrophosphatase Inorganic pyrophosphatase. These e 100.0
PF00719156 Pyrophosphatase: Inorganic pyrophosphatase; InterP 100.0
COG0221171 Ppa Inorganic pyrophosphatase [Energy production a 100.0
KOG1626279 consensus Inorganic pyrophosphatase/Nucleosome rem 100.0
KOG1626279 consensus Inorganic pyrophosphatase/Nucleosome rem 94.45
>PLN02373 soluble inorganic pyrophosphatase Back     alignment and domain information 
Probab=100.00  E-value=4.3e-74  Score=489.47  Aligned_cols=187  Identities=90%  Similarity=1.438  Sum_probs=182.4

Q ss_pred             cccCCCcccCCCCCCCCCCCCCceeeccCCCceEEEECCCCCceEEEecCCCCeEeeeeccccccCccccCcCccccCCC
Q 027710           27 SMSHRSVAAHPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICED  106 (220)
Q Consensus        27 ~~~~~~~~~s~whdip~~~~~p~~~n~~~~~~~VIEIPrgs~~KyE~d~~~g~i~~Dr~l~~~~~YP~NYGfIP~T~~gD  106 (220)
                      ||+++..++|||||||++++.|++|||      |||||+||++|||+|+++|.|++||++++++.||||||||||||++|
T Consensus         1 ~~~~~~~~~~~whdi~~~~~~~~~v~v------VIEIP~gs~~KyE~dk~~g~i~~Dr~l~~~~~yP~nYGfIP~T~~~D   74 (188)
T PLN02373          1 SMSRRSVAAHPWHDLEIGPGAPAIFNC------VVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCED   74 (188)
T ss_pred             CcccccccCCccccCCCCCCCCCEEEE------EEEECCCCCeeEEEccCCCCEEEeeecccCCcCCcccccccccccCC
Confidence            477888999999999999999999999      99999999999999999999999999999999999999999999999


Q ss_pred             CCcceEEEecCccCCCcceEEEEEeeeEEeeeCCCCcceEEEEecCCCCCCCCCCCCCCChhHHHHHHHHHHHhhcCCCc
Q 027710          107 SDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENK  186 (220)
Q Consensus       107 GDPLDvlvl~~~p~~~G~v~~vrviG~l~miD~ge~D~KiiaV~~~dp~~~~i~di~Dl~~~~l~~I~~fF~~YK~legK  186 (220)
                      |||||||||++.|++||++++|||||+|+|+|+||+|||||||+++||+|++|++++|||++++++|+|||++||.+|||
T Consensus        75 gDPLDvlvl~~~~~~~G~vi~~R~iG~l~m~D~ge~D~KiIaV~~~dp~~~~i~dl~Dl~~~~l~~I~~fF~~YK~legK  154 (188)
T PLN02373         75 NDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHYTDIKELPPHRLAEIRRFFEDYKKNENK  154 (188)
T ss_pred             CCccEEEEecCCCCCCceEEEEEEEEEEEEeeCCCCCCeEEEEECCCcccccCCChHHCCHHHHHHHHHHHHHhcccCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEeccccCHHHHHHHHHHHHHHHHHHHHhhhc
Q 027710          187 KVDVEDFLPAEAAIEAIKYSMDLYASYIVESLR  219 (220)
Q Consensus       187 ~v~~~~~~~~~~A~~vI~~~~~~~~~~i~~~~~  219 (220)
                      ++++++|.|+++|+++|++|+++|++++.+.++
T Consensus       155 ~v~v~g~~~~~~A~~~I~~~~~~y~~~~~~~~~  187 (188)
T PLN02373        155 EVAVNDFLPAEAAIEAIQYSMDLYAEYIVESLR  187 (188)
T ss_pred             eEEeCCccCHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            999999999999999999999999999887765

>PRK00642 inorganic pyrophosphatase; Provisional Back     alignment and domain information
>PRK01250 inorganic pyrophosphatase; Provisional Back     alignment and domain information
>PLN02707 Soluble inorganic pyrophosphatase Back     alignment and domain information
>PRK02230 inorganic pyrophosphatase; Provisional Back     alignment and domain information
>cd00412 pyrophosphatase Inorganic pyrophosphatase Back     alignment and domain information
>PF00719 Pyrophosphatase: Inorganic pyrophosphatase; InterPro: IPR008162 Inorganic pyrophosphatase (3 Back     alignment and domain information
>COG0221 Ppa Inorganic pyrophosphatase [Energy production and conversion] Back     alignment and domain information
>KOG1626 consensus Inorganic pyrophosphatase/Nucleosome remodeling factor, subunit NURF38 [Energy production and conversion] Back     alignment and domain information
>KOG1626 consensus Inorganic pyrophosphatase/Nucleosome remodeling factor, subunit NURF38 [Energy production and conversion] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query220
1twl_A186 Inorganic Pyrophosphatase From Pyrococcus Furiosus 1e-40
1ude_A195 Crystal Structure Of The Inorganic Pyrophosphatase 8e-40
3q46_A178 Magnesium Activated Inorganic Pyrophosphatase From 8e-38
3i98_A178 X-Ray Crystallographic Structure Of Inorganic Pyrop 3e-37
3r6e_A178 The Structure Of Thermococcus Thioreducens' Inorgan 4e-34
2bqx_A173 Inorganic Pyrophosphatase From The Pathogenic Bacte 1e-29
1qez_A173 Sulfolobus Acidocaldarius Inorganic Pyrophosphatase 1e-29
1ygz_A173 Crystal Structure Of Inorganic Pyrophosphatase From 3e-29
2uxs_A169 2.7a Crystal Structure Of Inorganic Pyrophosphatase 4e-27
1sxv_A172 1.3a Crystal Structure Of Rv3628, Mycobacterium Tub 5e-27
1wcf_A171 1.54 A Crystal Structure Of Rv3628, Mycobacterium T 6e-27
3sw5_A180 Crystal Structure Of Inorganic Pyrophosphatase From 3e-26
2prd_A174 Crystal Structure Of Inorganic Pyrophosphatase From 1e-25
4ecp_A167 X-Ray Crystal Structure Of Inorganic Pyrophosphate 3e-25
2eip_A175 Inorganic Pyrophosphatase Length = 175 4e-25
3fq3_A197 Crystal Structure Of Inorganic Phosphatase From Bru 7e-25
3d53_A173 2.2 A Crystal Structure Of Inorganic Pyrophosphatas 7e-25
1obw_A175 Structure Of Inorganic Pyrophosphatase Length = 175 8e-25
3d63_A196 Crystal Structure Of Inorganic Pyrophosphatase From 1e-24
1mjz_A175 Structure Of Inorganic Pyrophosphatase Mutant D97n 1e-24
1mjw_A175 Structure Of Inorganic Pyrophosphatase Mutant D42n 1e-24
1mjx_A175 Structure Of Inorganic Pyrophosphatase Mutant D65n 1e-24
2au7_A175 The R43q Active Site Variant Of E.Coli Inorganic Py 2e-24
1mjy_A175 Structure Of Inorganic Pyrophosphatase Mutant D70n 2e-24
3ld3_A199 Crystal Structure Of Inorganic Phosphatase From Ana 2e-22
3lo0_A193 Crystal Structure Of Inorganic Pyrophosphatase From 4e-22
3tr4_A178 Structure Of An Inorganic Pyrophosphatase (Ppa) Fro 1e-21
3i4q_A176 Structure Of A Putative Inorganic Pyrophosphatase F 1e-18
1ypp_A286 Acid Anhydride Hydrolase Length = 286 5e-10
8prk_A287 The R78k And D117e Active Site Variants Of Saccharo 1e-09
1wgi_A286 Structure Of Inorganic Pyrophosphatase Length = 286 2e-09
1m38_A287 Structure Of Inorganic Pyrophosphatase Length = 287 2e-09
1huj_A281 Refined Structure Of Yeast Inorganic Pyrophosphatas 2e-09
1huk_A281 Refined Structure Of Yeast Inorganic Pyrophosphatas 2e-09
2ik1_A286 Yeast Inorganic Pyrophosphatase Variant Y93f With M 5e-09
2ik0_A286 Yeast Inorganic Pyrophosphatase Variant E48d With M 5e-09
2ik7_A286 Yeast Inorganic Pyrophosphatase Variant D120n With 6e-09
117e_A286 The R78k And D117e Active Site Variants Of Saccharo 7e-09
2ik6_A286 Yeast Inorganic Pyrophosphatase Variant D120e With 7e-09
2ik9_A286 Yeast Inorganic Pyrophosphatase Variant D152e With 7e-09
2ik2_A286 Yeast Inorganic Pyrophosphatase Variant D115e With 7e-09
1pyp_A285 X-Ray Diffraction Study Of Inorganic Pyrophosphatas 1e-08
>pdb|1TWL|A Chain A, Inorganic Pyrophosphatase From Pyrococcus Furiosus Pfu-264096-001 Length = 186 Back     alignment and structure 
Iteration: 1

 Score =  162 bits (410), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 83/177 (46%), Positives = 117/177 (66%), Gaps = 6/177 (3%)
Query: 34  AAHPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYP 93
            ++P+HDLE GP  P V         ++EI KG + KYELDK +GL+K+DRVLYS   YP
Sbjct: 8   GSNPFHDLEPGPDVPEVVYA------IIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYP 61
Query: 94  HNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD 153
            +YG IPRT  ED DP D++V+M+EPV P + +  R IGL  MID G+KD K++AV  +D
Sbjct: 62  VDYGIIPRTWYEDDDPFDIMVIMREPVYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVED 121
Query: 154 PEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLY 210
           P F+ +KDI ++P   L EI  FF+ YK+ + K++ VE +  AEAA   I  ++++Y
Sbjct: 122 PYFKDWKDIDDVPKAFLDEIAHFFKRYKELQGKEIIVEGWEGAEAAKREILRAIEMY 178
>pdb|1UDE|A Chain A, Crystal Structure Of The Inorganic Pyrophosphatase From The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3 Length = 195 Back     alignment and structure
>pdb|3Q46|A Chain A, Magnesium Activated Inorganic Pyrophosphatase From Thermococcus Thioreducens Bound To Hydrolyzed Product At 0.99 Angstrom Resolution Length = 178 Back     alignment and structure
>pdb|3I98|A Chain A, X-Ray Crystallographic Structure Of Inorganic Pyrophosphatase At 298k From Archaeon Thermococcus Thioreducens Length = 178 Back     alignment and structure
>pdb|3R6E|A Chain A, The Structure Of Thermococcus Thioreducens' Inorganic Pyrophosphatase Bound To Sulfate Length = 178 Back     alignment and structure
>pdb|2BQX|A Chain A, Inorganic Pyrophosphatase From The Pathogenic Bacterium Helicobacter Pylori-Kinetic And Structural Properties Length = 173 Back     alignment and structure
>pdb|1QEZ|A Chain A, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An Archael Pyrophosphatase. Length = 173 Back     alignment and structure
>pdb|1YGZ|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Helicobacter Pylori Length = 173 Back     alignment and structure
>pdb|2UXS|A Chain A, 2.7a Crystal Structure Of Inorganic Pyrophosphatase (rv3628) From Mycobacterium Tuberculosis At Ph 7.5 Length = 169 Back     alignment and structure
>pdb|1SXV|A Chain A, 1.3a Crystal Structure Of Rv3628, Mycobacterium Tuberculosis Inorganic Pyrophosphatase (Ppase) At Ph5.0 Length = 172 Back     alignment and structure
>pdb|1WCF|A Chain A, 1.54 A Crystal Structure Of Rv3628, Mycobacterium Tuberculosis Inorganic Pyrophosphatase (Ppase) At Ph7.0 Length = 171 Back     alignment and structure
>pdb|3SW5|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Bartonella Henselae Length = 180 Back     alignment and structure
>pdb|2PRD|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Thermus Thermophilus Length = 174 Back     alignment and structure
>pdb|4ECP|A Chain A, X-Ray Crystal Structure Of Inorganic Pyrophosphate Ppa From Mycobacterium Leprae Length = 167 Back     alignment and structure
>pdb|2EIP|A Chain A, Inorganic Pyrophosphatase Length = 175 Back     alignment and structure
>pdb|3FQ3|A Chain A, Crystal Structure Of Inorganic Phosphatase From Brucella Melitensis Length = 197 Back     alignment and structure
>pdb|3D53|A Chain A, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From Rickettsia Prowazekii Length = 173 Back     alignment and structure
>pdb|1OBW|A Chain A, Structure Of Inorganic Pyrophosphatase Length = 175 Back     alignment and structure
>pdb|3D63|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Burkholderia Pseudomallei Length = 196 Back     alignment and structure
>pdb|1MJZ|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D97n Length = 175 Back     alignment and structure
>pdb|1MJW|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D42n Length = 175 Back     alignment and structure
>pdb|1MJX|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D65n Length = 175 Back     alignment and structure
>pdb|2AU7|A Chain A, The R43q Active Site Variant Of E.Coli Inorganic Pyrophosphatase Length = 175 Back     alignment and structure
>pdb|1MJY|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D70n Length = 175 Back     alignment and structure
>pdb|3LD3|A Chain A, Crystal Structure Of Inorganic Phosphatase From Anaplasma Phagocytophilum At 1.75a Resolution Length = 199 Back     alignment and structure
>pdb|3LO0|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Ehrlichia Chaffeensis Length = 193 Back     alignment and structure
>pdb|3TR4|A Chain A, Structure Of An Inorganic Pyrophosphatase (Ppa) From Coxiella Burnetii Length = 178 Back     alignment and structure
>pdb|3I4Q|A Chain A, Structure Of A Putative Inorganic Pyrophosphatase From The Oil- Degrading Bacterium Oleispira Antarctica Length = 176 Back     alignment and structure
>pdb|1YPP|A Chain A, Acid Anhydride Hydrolase Length = 286 Back     alignment and structure
>pdb|8PRK|A Chain A, The R78k And D117e Active Site Variants Of Saccharomyces Cerevisiae Soluble Inorganic Pyrophosphatase: Structural Studies And Mechanistic Implications Length = 287 Back     alignment and structure
>pdb|1WGI|A Chain A, Structure Of Inorganic Pyrophosphatase Length = 286 Back     alignment and structure
>pdb|1M38|A Chain A, Structure Of Inorganic Pyrophosphatase Length = 287 Back     alignment and structure
>pdb|1HUJ|A Chain A, Refined Structure Of Yeast Inorganic Pyrophosphatase And Its K61r Mutant Length = 281 Back     alignment and structure
>pdb|1HUK|A Chain A, Refined Structure Of Yeast Inorganic Pyrophosphatase And Its K61r Mutant Length = 281 Back     alignment and structure
>pdb|2IK1|A Chain A, Yeast Inorganic Pyrophosphatase Variant Y93f With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|2IK0|A Chain A, Yeast Inorganic Pyrophosphatase Variant E48d With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|2IK7|A Chain A, Yeast Inorganic Pyrophosphatase Variant D120n With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|117E|A Chain A, The R78k And D117e Active Site Variants Of Saccharomyces Cerevisiae Soluble Inorganic Pyrophosphatase: Structural Studies And Mechanistic Implications Length = 286 Back     alignment and structure
>pdb|2IK6|A Chain A, Yeast Inorganic Pyrophosphatase Variant D120e With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|2IK9|A Chain A, Yeast Inorganic Pyrophosphatase Variant D152e With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|2IK2|A Chain A, Yeast Inorganic Pyrophosphatase Variant D115e With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|1PYP|A Chain A, X-Ray Diffraction Study Of Inorganic Pyrophosphatase From Baker,S Yeast At The 3 Angstroms Resolution (Russian) Length = 285 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query220
3q46_A178 TT-ippase; inorganic pyrophosphatase, hydrolase; H 8e-96
2prd_A174 Pyrophosphate phosphohydrolase; 2.00A {Thermus the 5e-92
3gvf_A196 Inorganic pyrophosphatase; structural genomics, hy 9e-91
1sxv_A172 Inorganic pyrophosphatase; structural genomics, pp 2e-90
3ld3_A199 Inorganic pyrophosphatase; structural genomics, se 3e-90
1qez_A173 Ppase, S-ppase, protein (inorganic pyrophosphatase 3e-90
2bqx_A173 Inorganic pyrophosphatase; hydrolase; 1.90A {Helic 2e-88
2au7_A175 Inorganic pyrophosphatase; hydrolase, mutant; 1.05 5e-87
3fq3_A197 Inorganic pyrophosphatase:bacterial/archaeal INOR 7e-87
3tr4_A178 Inorganic pyrophosphatase; central intermediary me 2e-81
3d53_A173 Inorganic pyrophosphatase; seattle structural G ce 1e-80
1e9g_A286 Ppase, inorganic pyrophosphatase; pyrophosphate ph 2e-67
>3q46_A TT-ippase; inorganic pyrophosphatase, hydrolase; HET: EPE; 0.99A {Thermococcus thioreducens} PDB: 3r6e_A* 3q3l_A 3i98_A 3q4w_A 3q9m_A* 3r5u_A 3r5v_A* 3q5v_A* 1ude_A 1twl_A Length = 178 Back     alignment and structure
 Score =  276 bits (707), Expect = 8e-96
 Identities = 78/176 (44%), Positives = 113/176 (64%), Gaps = 6/176 (3%)

Query: 36  HPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHN 95
           +P+H+LE GP  P V         ++EI KG + KYELDKA+GL+K+DRVLYS   YP +
Sbjct: 2   NPFHELEPGPEVPEVVYA------LIEIPKGSRNKYELDKATGLLKLDRVLYSPFFYPVD 55

Query: 96  YGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPE 155
           YG IP+T  +D DP D++V+M+EPV P + +  R IG+M M D G+KD K++AV  +DP 
Sbjct: 56  YGIIPQTWYDDGDPFDIMVIMREPVYPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPY 115

Query: 156 FRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLYA 211
           F  +KDI ++P   L EI  FF+ YK+ + K   +E +  AE A   I  ++++Y 
Sbjct: 116 FNDWKDISDVPKAFLDEIAHFFQRYKELQGKTTKIEGWGNAEEAKREILRAIEMYK 171
>2prd_A Pyrophosphate phosphohydrolase; 2.00A {Thermus thermophilus} SCOP: b.40.5.1 Length = 174 Back     alignment and structure
>3gvf_A Inorganic pyrophosphatase; structural genomics, hydrolase, S structural genomics center for infectious disease, ssgcid; HET: PGE; 1.75A {Burkholderia pseudomallei 1710B} PDB: 3d63_A* 3eiy_A 3ej0_A* 3ej2_A* 3eiz_A* Length = 196 Back     alignment and structure
>1sxv_A Inorganic pyrophosphatase; structural genomics, ppase,, hydrolase; 1.30A {Mycobacterium tuberculosis} PDB: 1wcf_A 2uxs_A 4ecp_A Length = 172 Back     alignment and structure
>3ld3_A Inorganic pyrophosphatase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.75A {Anaplasma phagocytophilum} PDB: 3lo0_A Length = 199 Back     alignment and structure
>1qez_A Ppase, S-ppase, protein (inorganic pyrophosphatase); thermostability, magnesium, hydrolase; 2.70A {Sulfolobus acidocaldarius} SCOP: b.40.5.1 Length = 173 Back     alignment and structure
>2bqx_A Inorganic pyrophosphatase; hydrolase; 1.90A {Helicobacter pylori} PDB: 1ygz_A 2bqy_A Length = 173 Back     alignment and structure
>2au7_A Inorganic pyrophosphatase; hydrolase, mutant; 1.05A {Escherichia coli} PDB: 1i40_A 1i6t_A 1igp_A 1obw_A 2au6_A 2au8_A 2au9_A 2auu_A 1mjy_A 1faj_A 1ino_A 1ipw_A 1jfd_A 2eip_A 1mjz_A 1mjx_A 1mjw_A 3i4q_A* Length = 175 Back     alignment and structure
>3fq3_A Inorganic pyrophosphatase:bacterial/archaeal INOR pyrophosphatase; ssgcid, inorganic phosphatase; 1.90A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3sw5_A Length = 197 Back     alignment and structure
>3tr4_A Inorganic pyrophosphatase; central intermediary metabolism, hydrolase; HET: MSE; 2.00A {Coxiella burnetii} Length = 178 Back     alignment and structure
>3d53_A Inorganic pyrophosphatase; seattle structural G center for infectious disease, ssgcid, hydrolase, magnesium binding; 2.20A {Rickettsia prowazekii} PDB: 3emj_A* Length = 173 Back     alignment and structure
>1e9g_A Ppase, inorganic pyrophosphatase; pyrophosphate phosphohydrolase, hydrolase, manganese; HET: PO4; 1.15A {Saccharomyces cerevisiae} SCOP: b.40.5.1 PDB: 1e6a_A* 1wgi_A 1wgj_A 2ihp_A* 8prk_A 2ik6_A 2ik2_A 2ik4_A 117e_A 2ik1_A* 2ik9_A 2ik0_A 2ik7_A 1m38_A 1ypp_A 1huk_A 1huj_A 1pyp_A Length = 286 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query220
3q46_A178 TT-ippase; inorganic pyrophosphatase, hydrolase; H 100.0
3gvf_A196 Inorganic pyrophosphatase; structural genomics, hy 100.0
2prd_A174 Pyrophosphate phosphohydrolase; 2.00A {Thermus the 100.0
3fq3_A197 Inorganic pyrophosphatase:bacterial/archaeal INOR 100.0
3ld3_A199 Inorganic pyrophosphatase; structural genomics, se 100.0
2au7_A175 Inorganic pyrophosphatase; hydrolase, mutant; 1.05 100.0
2bqx_A173 Inorganic pyrophosphatase; hydrolase; 1.90A {Helic 100.0
3d53_A173 Inorganic pyrophosphatase; seattle structural G ce 100.0
3tr4_A178 Inorganic pyrophosphatase; central intermediary me 100.0
1e9g_A286 Ppase, inorganic pyrophosphatase; pyrophosphate ph 100.0
1qez_A173 Ppase, S-ppase, protein (inorganic pyrophosphatase 100.0
1sxv_A172 Inorganic pyrophosphatase; structural genomics, pp 100.0
>3q46_A TT-ippase; inorganic pyrophosphatase, hydrolase; HET: EPE; 0.99A {Thermococcus thioreducens} SCOP: b.40.5.1 PDB: 3r6e_A* 3q3l_A 3i98_A 3q4w_A 3q9m_A* 3r5u_A 3r5v_A* 3q5v_A* 1ude_A 1twl_A Back     alignment and structure
Probab=100.00  E-value=2.2e-74  Score=486.69  Aligned_cols=175  Identities=45%  Similarity=0.803  Sum_probs=170.4

Q ss_pred             cCCCCCCCCCCCCCceeeccCCCceEEEECCCCCceEEEecCCCCeEeeeeccccccCccccCcCccccCCCCCcceEEE
Q 027710           35 AHPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLV  114 (220)
Q Consensus        35 ~s~whdip~~~~~p~~~n~~~~~~~VIEIPrgs~~KyE~d~~~g~i~~Dr~l~~~~~YP~NYGfIP~T~~gDGDPLDvlv  114 (220)
                      +|||||||++.+.|++|||      |||||+||++|||+|+++|.|++||++++++.||+|||||||||++|||||||||
T Consensus         1 ~spwhdi~~g~~~p~~~nv------vIEIP~gs~~KyE~dk~~g~i~~DR~l~~~~~YP~NYGfIP~Tl~~DgDPlDvlv   74 (178)
T 3q46_A            1 MNPFHELEPGPEVPEVVYA------LIEIPKGSRNKYELDKATGLLKLDRVLYSPFFYPVDYGIIPQTWYDDGDPFDIMV   74 (178)
T ss_dssp             CCTTTTSCSCSBTTTBCCC------EEEECTTCCEEEEECTTTSCEEEEEECSSSCCCSSEEEECTTCCBTTTBCCEEEE
T ss_pred             CCccccCCCCCCCCCEEEE------EEEECCCCCeeEEECCCCCCEEEeecccCCCCCCcccccCCCccCCCCCeeEEEE
Confidence            5899999999999999999      9999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCccCCCcceEEEEEeeeEEeeeCCCCcceEEEEecCCCCCCCCCCCCCCChhHHHHHHHHHHHhhcCCCceeEecccc
Q 027710          115 LMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFL  194 (220)
Q Consensus       115 l~~~p~~~G~v~~vrviG~l~miD~ge~D~KiiaV~~~dp~~~~i~di~Dl~~~~l~~I~~fF~~YK~legK~v~~~~~~  194 (220)
                      |+++|++|||+++|||||+|+|+|+||+||||||||++||+|++++|++|||++++++|+|||++||.+|||++++.+|.
T Consensus        75 l~~~~~~pG~vi~~r~iGvl~m~Dege~D~KiiaV~~~Dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~legK~v~~~g~~  154 (178)
T 3q46_A           75 IMREPVYPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPYFNDWKDISDVPKAFLDEIAHFFQRYKELQGKTTKIEGWG  154 (178)
T ss_dssp             CCSSCCCTTCBC-CEEEEEEEEEETTEECCEEEEECTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTGGGTCCEEEEEEE
T ss_pred             EcCCCCCCceEEEEEEEEEEEeecCCCccceEEEeeCCCccccccCChHHCCHHHHHHHHHHHHHhcCcCCCceEecccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHHHHHH
Q 027710          195 PAEAAIEAIKYSMDLYASYIV  215 (220)
Q Consensus       195 ~~~~A~~vI~~~~~~~~~~i~  215 (220)
                      ++++|+++|++|+++|++++.
T Consensus       155 ~~~~A~~~I~~~~~~~~~~~~  175 (178)
T 3q46_A          155 NAEEAKREILRAIEMYKEKFG  175 (178)
T ss_dssp             EHHHHHHHHHHHHHHHHHC-C
T ss_pred             CHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999998764
>3gvf_A Inorganic pyrophosphatase; structural genomics, hydrolase, S structural genomics center for infectious disease, ssgcid; HET: PGE; 1.75A {Burkholderia pseudomallei 1710B} PDB: 3d63_A* 3eiy_A 3ej0_A* 3ej2_A* 3eiz_A* Back     alignment and structure
>2prd_A Pyrophosphate phosphohydrolase; 2.00A {Thermus thermophilus} SCOP: b.40.5.1 Back     alignment and structure
>3fq3_A Inorganic pyrophosphatase:bacterial/archaeal INOR pyrophosphatase; ssgcid, inorganic phosphatase; 1.90A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3sw5_A Back     alignment and structure
>3ld3_A Inorganic pyrophosphatase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.75A {Anaplasma phagocytophilum} PDB: 3lo0_A Back     alignment and structure
>2au7_A Inorganic pyrophosphatase; hydrolase, mutant; 1.05A {Escherichia coli} PDB: 1i40_A 1i6t_A 1igp_A 1obw_A 2au6_A 2au8_A 2au9_A 2auu_A 1mjy_A 1faj_A 1ino_A 1ipw_A 1jfd_A 2eip_A 1mjz_A 1mjx_A 1mjw_A 3i4q_A* Back     alignment and structure
>2bqx_A Inorganic pyrophosphatase; hydrolase; 1.90A {Helicobacter pylori} PDB: 1ygz_A 2bqy_A Back     alignment and structure
>3d53_A Inorganic pyrophosphatase; seattle structural G center for infectious disease, ssgcid, hydrolase, magnesium binding; 2.20A {Rickettsia prowazekii} PDB: 3emj_A* Back     alignment and structure
>3tr4_A Inorganic pyrophosphatase; central intermediary metabolism, hydrolase; HET: MSE; 2.00A {Coxiella burnetii} SCOP: b.40.5.0 Back     alignment and structure
>1e9g_A Ppase, inorganic pyrophosphatase; pyrophosphate phosphohydrolase, hydrolase, manganese; HET: PO4; 1.15A {Saccharomyces cerevisiae} SCOP: b.40.5.1 PDB: 1e6a_A* 1wgi_A 1wgj_A 2ihp_A* 8prk_A 2ik6_A 2ik2_A 2ik4_A 117e_A 2ik1_A* 2ik9_A 2ik0_A 2ik7_A 1m38_A 1ypp_A 1huk_A 1huj_A 1pyp_A Back     alignment and structure
>1qez_A Ppase, S-ppase, protein (inorganic pyrophosphatase); thermostability, magnesium, hydrolase; 2.70A {Sulfolobus acidocaldarius} SCOP: b.40.5.1 Back     alignment and structure
>1sxv_A Inorganic pyrophosphatase; structural genomics, ppase,, hydrolase; 1.30A {Mycobacterium tuberculosis} PDB: 1wcf_A 2uxs_A 4ecp_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 220
d1twla_173 b.40.5.1 (A:) Inorganic pyrophosphatase {Pyrococcu 8e-64
d2prda_174 b.40.5.1 (A:) Inorganic pyrophosphatase {Thermus t 1e-57
d1e9ga_284 b.40.5.1 (A:) Inorganic pyrophosphatase {Baker's y 2e-54
d1i40a_175 b.40.5.1 (A:) Inorganic pyrophosphatase {Escherich 2e-54
d1qeza_170 b.40.5.1 (A:) Inorganic pyrophosphatase {Archaeon 2e-52
>d1twla_ b.40.5.1 (A:) Inorganic pyrophosphatase {Pyrococcus furiosus [TaxId: 2261]} Length = 173 Back     information, alignment and structure

class: All beta proteins
fold: OB-fold
superfamily: Inorganic pyrophosphatase
family: Inorganic pyrophosphatase
domain: Inorganic pyrophosphatase
species: Pyrococcus furiosus [TaxId: 2261]

 Score =  193 bits (493), Expect = 8e-64
 Identities = 83/175 (47%), Positives = 116/175 (66%), Gaps = 6/175 (3%)

Query: 36  HPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHN 95
           +P+HDLE GP  P V         ++EI KG + KYELDK +GL+K+DRVLYS   YP +
Sbjct: 1   NPFHDLEPGPDVPEVVYA------IIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVD 54

Query: 96  YGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPE 155
           YG IPRT  ED DP D++V+M+EPV P + +  R IGL  MID G+KD K++AV  +DP 
Sbjct: 55  YGIIPRTWYEDDDPFDIMVIMREPVYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPY 114

Query: 156 FRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLY 210
           F+ +KDI ++P   L EI  FF+ YK+ + K++ VE +  AEAA   I  ++++Y
Sbjct: 115 FKDWKDIDDVPKAFLDEIAHFFKRYKELQGKEIIVEGWEGAEAAKREILRAIEMY 169
>d2prda_ b.40.5.1 (A:) Inorganic pyrophosphatase {Thermus thermophilus [TaxId: 274]} Length = 174 Back     information, alignment and structure
>d1e9ga_ b.40.5.1 (A:) Inorganic pyrophosphatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 284 Back     information, alignment and structure
>d1i40a_ b.40.5.1 (A:) Inorganic pyrophosphatase {Escherichia coli [TaxId: 562]} Length = 175 Back     information, alignment and structure
>d1qeza_ b.40.5.1 (A:) Inorganic pyrophosphatase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Length = 170 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query220
d1twla_173 Inorganic pyrophosphatase {Pyrococcus furiosus [Ta 100.0
d2prda_174 Inorganic pyrophosphatase {Thermus thermophilus [T 100.0
d1e9ga_284 Inorganic pyrophosphatase {Baker's yeast (Saccharo 100.0
d1qeza_170 Inorganic pyrophosphatase {Archaeon Sulfolobus aci 100.0
d1i40a_175 Inorganic pyrophosphatase {Escherichia coli [TaxId 100.0
>d1twla_ b.40.5.1 (A:) Inorganic pyrophosphatase {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
class: All beta proteins
fold: OB-fold
superfamily: Inorganic pyrophosphatase
family: Inorganic pyrophosphatase
domain: Inorganic pyrophosphatase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=100.00  E-value=3e-71  Score=463.48  Aligned_cols=172  Identities=48%  Similarity=0.859  Sum_probs=168.8

Q ss_pred             CCCCCCCCCCCCCceeeccCCCceEEEECCCCCceEEEecCCCCeEeeeeccccccCccccCcCccccCCCCCcceEEEe
Q 027710           36 HPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVL  115 (220)
Q Consensus        36 s~whdip~~~~~p~~~n~~~~~~~VIEIPrgs~~KyE~d~~~g~i~~Dr~l~~~~~YP~NYGfIP~T~~gDGDPLDvlvl  115 (220)
                      |||||||++++.|++|||      |||||+||++|||+|+++|.+++||.+++++.||||||||||||++||||||||||
T Consensus         1 ~pwhdi~~~~~~p~~vn~------viEIP~gs~~KyE~dk~~g~~~~dr~l~~~~~yP~nYGfiP~T~~~DgDPLDvlvl   74 (173)
T d1twla_           1 NPFHDLEPGPDVPEVVYA------IIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPRTWYEDDDPFDIMVI   74 (173)
T ss_dssp             CHHHHSCSCSBTTTBEEE------EEEECTTCSEEEEECTTTCCEEEEEECSSSCCCSSEEEECTTCCBCCB-CCEEEEC
T ss_pred             CCccCCCCCCCCCCeEEE------EEEECCCCCcCEEEccCCCceeeeeecCCCccCCcccceeeccccCCCCCchheec
Confidence            799999999999999999      99999999999999999999999999999999999999999999999999999999


Q ss_pred             cCccCCCcceEEEEEeeeEEeeeCCCCcceEEEEecCCCCCCCCCCCCCCChhHHHHHHHHHHHhhcCCCceeEeccccC
Q 027710          116 MQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLP  195 (220)
Q Consensus       116 ~~~p~~~G~v~~vrviG~l~miD~ge~D~KiiaV~~~dp~~~~i~di~Dl~~~~l~~I~~fF~~YK~legK~v~~~~~~~  195 (220)
                      ++.|++||++++|||||+|.|+|+||.|||||||+++||+|++++|++||+++++++|++||++||.++||++++.+|.|
T Consensus        75 ~~~~~~~G~vv~~r~iG~l~m~D~ge~D~Kiiav~~~dp~~~~i~~i~dl~~~~l~~I~~fF~~YK~~egK~v~v~g~~~  154 (173)
T d1twla_          75 MREPVYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDWKDIDDVPKAFLDEIAHFFKRYKELQGKEIIVEGWEG  154 (173)
T ss_dssp             CSSCCCTTCEEEEEEEEEEEEEETTEECCEEEEEETTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTGGGTCCEEEEEEEE
T ss_pred             cccccCCceEEEEEEEEEEEeccCCCccceEEEEecCCchhhccCChHHCCHHHHHHHHHHHHHcCCCCCCceEEcCccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 027710          196 AEAAIEAIKYSMDLYASY  213 (220)
Q Consensus       196 ~~~A~~vI~~~~~~~~~~  213 (220)
                      +++|+++|++||++|++.
T Consensus       155 ~~~A~k~I~~~~~~y~~~  172 (173)
T d1twla_         155 AEAAKREILRAIEMYKEK  172 (173)
T ss_dssp             HHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHhh
Confidence            999999999999999874
>d2prda_ b.40.5.1 (A:) Inorganic pyrophosphatase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1e9ga_ b.40.5.1 (A:) Inorganic pyrophosphatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1qeza_ b.40.5.1 (A:) Inorganic pyrophosphatase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d1i40a_ b.40.5.1 (A:) Inorganic pyrophosphatase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure