Citrus Sinensis ID: 027747

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------22
MEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARDFPSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL
cccccccEEEccHHHHHHHHHccccccEEEEccccHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHccccEEEccccHHHHHHHHHHHHHHHccccccEEEEccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccEEEEEEcccccEEEEEEEcccccEEEEEEEcccccccHHHHHHHHHHHHccccEEEEccccc
ccccccccEcccHHHHHHHHHHcccccEEEEcccHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHccccEEEcccHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccHHHHHHHHHHHHHHccccccHEEEcccccccccccccEEEEEEEcccccEEEEEEEEEccEEEEEEEEEccHHHHHHHHHHHHHHHHHccEEEEcccccc
meqpleipvmSDLTMVLGSISQSKARAVVIDftdastvydnVKQATAFGMRSVVYVPHIQLETVSALSAFCdkasmgcliaptlsIGSILLQQAAISAsfhyknveivesrpnardfpspdaTQIANNLSNlgqiynredistDVKARGqvlgedgvrvhsmvlpglpssttvyfsrpgevysikhditdvqsLMPGLILAIRKVVHLKNLVYGLEKFL
meqpleipvMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARDFPSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL
MEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARDFPSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL
***********DLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIV********************LSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLE***
*EQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARDFPSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL
MEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARDFPSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL
***PLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARDFPSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARDFPSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query219 2.2.26 [Sep-21-2011]
Q9FJ82298 Putative 4-hydroxy-tetrah yes no 1.0 0.734 0.835 1e-105
B8HRK9275 4-hydroxy-tetrahydrodipic yes no 0.981 0.781 0.468 5e-50
Q10YI1275 4-hydroxy-tetrahydrodipic yes no 0.981 0.781 0.468 7e-50
B7KBV6275 4-hydroxy-tetrahydrodipic yes no 0.986 0.785 0.442 2e-47
Q8YU19278 4-hydroxy-tetrahydrodipic yes no 0.995 0.784 0.44 2e-47
Q3MFY8278 4-hydroxy-tetrahydrodipic yes no 0.995 0.784 0.44 2e-47
P72642275 4-hydroxy-tetrahydrodipic N/A no 0.981 0.781 0.454 2e-47
Q9S3W8278 4-hydroxy-tetrahydrodipic N/A no 0.995 0.784 0.431 8e-47
B2J0A9278 4-hydroxy-tetrahydrodipic yes no 0.995 0.784 0.435 2e-46
B7JW41275 4-hydroxy-tetrahydrodipic yes no 0.977 0.778 0.433 3e-45
>sp|Q9FJ82|DAPB3_ARATH Putative 4-hydroxy-tetrahydrodipicolinate reductase 3, chloroplastic OS=Arabidopsis thaliana GN=DAPB3 PE=2 SV=1 Back     alignment and function desciption
 Score =  380 bits (976), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 183/219 (83%), Positives = 200/219 (91%)

Query: 1   MEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQ 60
           ME+PLEIPV+SDLTMVLGSISQ K   VVIDFTD STVY+NVKQATAFGM+SVVYVP I+
Sbjct: 80  MEEPLEIPVVSDLTMVLGSISQGKEVGVVIDFTDPSTVYENVKQATAFGMKSVVYVPRIK 139

Query: 61  LETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARDFPSP 120
            ETVSALSA CDKA+MGCL+APTLSIGSILLQQA I ASFHY NVE+VESRPNA D PSP
Sbjct: 140 PETVSALSALCDKATMGCLVAPTLSIGSILLQQAVIMASFHYNNVELVESRPNAADLPSP 199

Query: 121 DATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGE 180
           +A QIANN+SNLGQIYNRED STDV+ARGQV+GEDGVRVHSMVLPGLPSST VYFS PG+
Sbjct: 200 EAIQIANNISNLGQIYNREDSSTDVQARGQVIGEDGVRVHSMVLPGLPSSTQVYFSSPGD 259

Query: 181 VYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
           VY++KHDI DV+SLMPGL+LAIRKVV LKNLVYGLEKFL
Sbjct: 260 VYTVKHDIIDVRSLMPGLLLAIRKVVRLKNLVYGLEKFL 298

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 2EC: 6
>sp|B8HRK9|DAPB_CYAP4 4-hydroxy-tetrahydrodipicolinate reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dapB PE=3 SV=1 Back     alignment and function description
>sp|Q10YI1|DAPB_TRIEI 4-hydroxy-tetrahydrodipicolinate reductase OS=Trichodesmium erythraeum (strain IMS101) GN=dapB PE=3 SV=1 Back     alignment and function description
>sp|B7KBV6|DAPB_CYAP7 4-hydroxy-tetrahydrodipicolinate reductase OS=Cyanothece sp. (strain PCC 7424) GN=dapB PE=3 SV=1 Back     alignment and function description
>sp|Q8YU19|DAPB_NOSS1 4-hydroxy-tetrahydrodipicolinate reductase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=dapB PE=3 SV=1 Back     alignment and function description
>sp|Q3MFY8|DAPB_ANAVT 4-hydroxy-tetrahydrodipicolinate reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dapB PE=3 SV=1 Back     alignment and function description
>sp|P72642|DAPB_SYNY3 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=dapB PE=3 SV=1 Back     alignment and function description
>sp|Q9S3W8|DAPB_MASLA 4-hydroxy-tetrahydrodipicolinate reductase OS=Mastigocladus laminosus GN=dapB PE=3 SV=1 Back     alignment and function description
>sp|B2J0A9|DAPB_NOSP7 4-hydroxy-tetrahydrodipicolinate reductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dapB PE=3 SV=1 Back     alignment and function description
>sp|B7JW41|DAPB_CYAP8 4-hydroxy-tetrahydrodipicolinate reductase OS=Cyanothece sp. (strain PCC 8801) GN=dapB PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query219
225455455302 PREDICTED: putative dihydrodipicolinate 1.0 0.725 0.853 1e-107
224136862300 predicted protein [Populus trichocarpa] 1.0 0.73 0.858 1e-106
297741105303 unnamed protein product [Vitis vinifera] 1.0 0.722 0.85 1e-105
297792539298 dihydrodipicolinate reductase family pro 1.0 0.734 0.844 1e-104
255539549300 dihydrodipicolinate reductase, putative 1.0 0.73 0.826 1e-103
15242275298 putative dihydrodipicolinate reductase 3 1.0 0.734 0.835 1e-103
356575925301 PREDICTED: putative dihydrodipicolinate 0.995 0.724 0.840 1e-103
21536648297 dihydrodipicolinate reductase-like prote 0.995 0.734 0.835 1e-102
449446063300 PREDICTED: putative dihydrodipicolinate 1.0 0.73 0.808 1e-102
356535900301 PREDICTED: putative dihydrodipicolinate 0.995 0.724 0.831 1e-102
>gi|225455455|ref|XP_002274702.1| PREDICTED: putative dihydrodipicolinate reductase 3, chloroplastic [Vitis vinifera] gi|147816661|emb|CAN68386.1| hypothetical protein VITISV_012454 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  392 bits (1007), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 187/219 (85%), Positives = 204/219 (93%)

Query: 1   MEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQ 60
           ME+ LE+P+++DLTMVLGSISQSKA  VV+DFTD STVY+NVKQATAFGM SVVYVP I+
Sbjct: 84  MEEALEMPIINDLTMVLGSISQSKATGVVVDFTDPSTVYENVKQATAFGMNSVVYVPRIK 143

Query: 61  LETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARDFPSP 120
           L+TV+ALSAFC+KASMGCL+APTLSIGSILLQQAAISASFHY NVEIVESRP   DFPSP
Sbjct: 144 LDTVTALSAFCEKASMGCLVAPTLSIGSILLQQAAISASFHYNNVEIVESRPTPTDFPSP 203

Query: 121 DATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGE 180
           DA QIANNLSNLGQIYNREDISTD+ ARGQVLGEDG+RVHS+VLPGLPSSTTVYFS PGE
Sbjct: 204 DAIQIANNLSNLGQIYNREDISTDILARGQVLGEDGIRVHSLVLPGLPSSTTVYFSGPGE 263

Query: 181 VYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
           VYS+KHDITDV+ LMPGLILAIRKVV LKNLVYGLEKFL
Sbjct: 264 VYSLKHDITDVRCLMPGLILAIRKVVRLKNLVYGLEKFL 302

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224136862|ref|XP_002322434.1| predicted protein [Populus trichocarpa] gi|222869430|gb|EEF06561.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297741105|emb|CBI31836.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297792539|ref|XP_002864154.1| dihydrodipicolinate reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297309989|gb|EFH40413.1| dihydrodipicolinate reductase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|255539549|ref|XP_002510839.1| dihydrodipicolinate reductase, putative [Ricinus communis] gi|223549954|gb|EEF51441.1| dihydrodipicolinate reductase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|15242275|ref|NP_200023.1| putative dihydrodipicolinate reductase 3 [Arabidopsis thaliana] gi|75262543|sp|Q9FJ82.1|DAPB3_ARATH RecName: Full=Putative 4-hydroxy-tetrahydrodipicolinate reductase 3, chloroplastic; Short=HTPA reductase 3; Flags: Precursor gi|10177745|dbj|BAB11058.1| dihydrodipicolinate reductase-like protein [Arabidopsis thaliana] gi|124301156|gb|ABN04830.1| At5g52100 [Arabidopsis thaliana] gi|332008788|gb|AED96171.1| putative dihydrodipicolinate reductase 3 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356575925|ref|XP_003556086.1| PREDICTED: putative dihydrodipicolinate reductase 3, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|21536648|gb|AAM60980.1| dihydrodipicolinate reductase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449446063|ref|XP_004140791.1| PREDICTED: putative dihydrodipicolinate reductase 3, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356535900|ref|XP_003536480.1| PREDICTED: putative dihydrodipicolinate reductase 3, chloroplastic-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query219
TAIR|locus:2173043298 CRR1 "chlororespiration reduct 1.0 0.734 0.835 1e-93
TIGR_CMR|CBU_1709239 CBU_1709 "dihydrodipicolinate 0.954 0.874 0.337 1.5e-26
TIGR_CMR|DET_0971263 DET_0971 "dihydrodipicolinate 0.940 0.783 0.319 2.9e-23
UNIPROTKB|P63895255 dapB "4-hydroxy-tetrahydrodipi 0.940 0.807 0.331 2.1e-22
TIGR_CMR|CHY_1151263 CHY_1151 "dihydrodipicolinate 0.867 0.722 0.312 7e-22
TIGR_CMR|BA_1555266 BA_1555 "dihydrodipicolinate r 0.949 0.781 0.286 1.4e-18
UNIPROTKB|P72024245 dapB "4-hydroxy-tetrahydrodipi 0.867 0.775 0.319 2.2e-18
TAIR|locus:2173043 CRR1 "chlororespiration reduction 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 933 (333.5 bits), Expect = 1.0e-93, P = 1.0e-93
 Identities = 183/219 (83%), Positives = 200/219 (91%)

Query:     1 MEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQ 60
             ME+PLEIPV+SDLTMVLGSISQ K   VVIDFTD STVY+NVKQATAFGM+SVVYVP I+
Sbjct:    80 MEEPLEIPVVSDLTMVLGSISQGKEVGVVIDFTDPSTVYENVKQATAFGMKSVVYVPRIK 139

Query:    61 LETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARDFPSP 120
              ETVSALSA CDKA+MGCL+APTLSIGSILLQQA I ASFHY NVE+VESRPNA D PSP
Sbjct:   140 PETVSALSALCDKATMGCLVAPTLSIGSILLQQAVIMASFHYNNVELVESRPNAADLPSP 199

Query:   121 DATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGE 180
             +A QIANN+SNLGQIYNRED STDV+ARGQV+GEDGVRVHSMVLPGLPSST VYFS PG+
Sbjct:   200 EAIQIANNISNLGQIYNREDSSTDVQARGQVIGEDGVRVHSMVLPGLPSSTQVYFSSPGD 259

Query:   181 VYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
             VY++KHDI DV+SLMPGL+LAIRKVV LKNLVYGLEKFL
Sbjct:   260 VYTVKHDIIDVRSLMPGLLLAIRKVVRLKNLVYGLEKFL 298
GO:0000166 "nucleotide binding" evidence=IEA
GO:0008839 "4-hydroxy-tetrahydrodipicolinate reductase" evidence=IEA;IGI;ISS
GO:0009089 "lysine biosynthetic process via diaminopimelate" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0070402 "NADPH binding" evidence=IEA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0019684 "photosynthesis, light reaction" evidence=IMP
GO:0009773 "photosynthetic electron transport in photosystem I" evidence=RCA
GO:0009965 "leaf morphogenesis" evidence=RCA
GO:0010103 "stomatal complex morphogenesis" evidence=RCA
GO:0010207 "photosystem II assembly" evidence=RCA
GO:0016556 "mRNA modification" evidence=RCA
GO:0030154 "cell differentiation" evidence=RCA
GO:0042742 "defense response to bacterium" evidence=RCA
GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA
TIGR_CMR|CBU_1709 CBU_1709 "dihydrodipicolinate reductase" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
TIGR_CMR|DET_0971 DET_0971 "dihydrodipicolinate reductase" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
UNIPROTKB|P63895 dapB "4-hydroxy-tetrahydrodipicolinate reductase" [Streptococcus pneumoniae TIGR4 (taxid:170187)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1151 CHY_1151 "dihydrodipicolinate reductase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|BA_1555 BA_1555 "dihydrodipicolinate reductase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|P72024 dapB "4-hydroxy-tetrahydrodipicolinate reductase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
B6J4U6DAPB_COXB11, ., 3, ., 1, ., 2, 60.33330.95430.8744yesno
P24703DAPB_COXBU1, ., 3, ., 1, ., 2, 60.33330.95430.8744yesno
B6J2F3DAPB_COXB21, ., 3, ., 1, ., 2, 60.33330.95430.8744yesno
Q5X8U7DAPB_LEGPA1, ., 3, ., 1, ., 2, 60.32670.91320.8230yesno
A9NA71DAPB_COXBR1, ., 3, ., 1, ., 2, 60.33330.95430.8744yesno
Q9FJ82DAPB3_ARATH1, ., 3, ., 1, ., 2, 60.83561.00.7348yesno
Q8DUL9DAPB_STRMU1, ., 3, ., 1, ., 2, 60.33480.93600.8039yesno
A9KC25DAPB_COXBN1, ., 3, ., 1, ., 2, 60.33330.95430.8744yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.3.10.766
3rd Layer1.3.1.260.824

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00007398001
SubName- Full=Putative uncharacterized protein (Chromosome chr16 scaffold_189, whole genome shotgun sequence); (302 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00026365001
SubName- Full=Chromosome chr15 scaffold_37, whole genome shotgun sequence; (363 aa)
•    •• 0.997
GSVIVG00030599001
SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (344 aa)
•     • 0.946
GSVIVG00015287001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (397 aa)
•    •• 0.935
GSVIVG00031581001
SubName- Full=Chromosome chr12 scaffold_57, whole genome shotgun sequence; (419 aa)
     •• 0.929
GSVIVG00038553001
SubName- Full=Chromosome chr3 scaffold_95, whole genome shotgun sequence; (459 aa)
     •• 0.925
GSVIVG00023128001
SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (370 aa)
•     • 0.814
GSVIVG00034770001
SubName- Full=Chromosome chr5 scaffold_72, whole genome shotgun sequence; (100 aa)
     •  0.800
GSVIVG00036342001
SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (485 aa)
•     • 0.756
GSVIVG00033799001
SubName- Full=Chromosome undetermined scaffold_69, whole genome shotgun sequence; (485 aa)
•     • 0.753
GSVIVG00017918001
SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (880 aa)
•  •    0.608

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query219
TIGR00036266 TIGR00036, dapB, dihydrodipicolinate reductase 1e-30
PRK00048257 PRK00048, PRK00048, dihydrodipicolinate reductase; 2e-26
COG0289266 COG0289, DapB, Dihydrodipicolinate reductase [Amin 4e-22
pfam05173137 pfam05173, DapB_C, Dihydrodipicolinate reductase, 4e-15
>gnl|CDD|129147 TIGR00036, dapB, dihydrodipicolinate reductase Back     alignment and domain information 
 Score =  113 bits (284), Expect = 1e-30
 Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 23/226 (10%)

Query: 4   PLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLET 63
            + +PV  DL       +      V+IDFT    V +++K A   G+R VV       E 
Sbjct: 53  KVGVPVTDDLE------AVETDPDVLIDFTTPEGVLNHLKFALEHGVRLVVGTTGFSEED 106

Query: 64  VSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNV--EIVESRPN-ARDFPSP 120
              L+   +KA +  +IAP  SIG  L+ +    A+ +  +   EI+E      +D PS 
Sbjct: 107 KQELADLAEKAGIAAVIAPNFSIGVNLMFKLLEKAAKYLGDYDIEIIELHHRHKKDAPSG 166

Query: 121 DATQIANNLS-------NLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTV 173
            A + A  ++           +  RE ++     RG     + + +H++    +    TV
Sbjct: 167 TALKTAEMIAEARGERLKNVAVTEREGLT---GERG----REEIGIHAVRGGDVVGEHTV 219

Query: 174 YFSRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
            F+  GE   I H  +       G + A R +   +  VY +E  L
Sbjct: 220 MFAGDGERLEITHRASSRACFANGAVRAARWLADKEAGVYDMEDVL 265

[Amino acid biosynthesis, Aspartate family]. Length = 266
>gnl|CDD|234595 PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional Back     alignment and domain information
>gnl|CDD|223366 COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|218479 pfam05173, DapB_C, Dihydrodipicolinate reductase, C-terminus Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 219
COG0289266 DapB Dihydrodipicolinate reductase [Amino acid tra 100.0
TIGR00036266 dapB dihydrodipicolinate reductase. 100.0
PRK00048257 dihydrodipicolinate reductase; Provisional 100.0
TIGR02130275 dapB_plant dihydrodipicolinate reductase. This nar 100.0
PLN02775286 Probable dihydrodipicolinate reductase 100.0
PF05173132 DapB_C: Dihydrodipicolinate reductase, C-terminus; 100.0
PF01113124 DapB_N: Dihydrodipicolinate reductase, N-terminus; 99.86
PRK08374336 homoserine dehydrogenase; Provisional 98.51
PRK13303265 L-aspartate dehydrogenase; Provisional 98.12
TIGR03855229 NAD_NadX aspartate dehydrogenase. Members of this 97.82
PF03447117 NAD_binding_3: Homoserine dehydrogenase, NAD bindi 97.76
PRK13304265 L-aspartate dehydrogenase; Reviewed 97.61
PRK13301267 putative L-aspartate dehydrogenase; Provisional 97.26
PF01408120 GFO_IDH_MocA: Oxidoreductase family, NAD-binding R 97.14
PRK06270341 homoserine dehydrogenase; Provisional 97.0
PRK05678291 succinyl-CoA synthetase subunit alpha; Validated 96.72
PRK13302271 putative L-aspartate dehydrogenase; Provisional 96.64
TIGR01019286 sucCoAalpha succinyl-CoA synthetase, alpha subunit 96.55
PTZ00187317 succinyl-CoA synthetase alpha subunit; Provisional 96.42
PRK06349 426 homoserine dehydrogenase; Provisional 96.28
PLN00125300 Succinyl-CoA ligase [GDP-forming] subunit alpha 96.24
COG1712255 Predicted dinucleotide-utilizing enzyme [General f 96.01
PLN02522 608 ATP citrate (pro-S)-lyase 95.97
PF13380116 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5 95.86
PRK11579346 putative oxidoreductase; Provisional 95.65
COG0074293 SucD Succinyl-CoA synthetase, alpha subunit [Energ 95.36
TIGR02717 447 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP 95.28
PRK10206344 putative oxidoreductase; Provisional 95.26
PRK04207341 glyceraldehyde-3-phosphate dehydrogenase; Provisio 95.03
PF03435 386 Saccharop_dh: Saccharopine dehydrogenase ; InterPr 94.56
PRK06091 555 membrane protein FdrA; Validated 94.25
COG0673342 MviM Predicted dehydrogenases and related proteins 93.67
PRK06392326 homoserine dehydrogenase; Provisional 93.47
PLN02819 1042 lysine-ketoglutarate reductase/saccharopine dehydr 93.33
COG1748 389 LYS9 Saccharopine dehydrogenase and related protei 93.05
PRK06813346 homoserine dehydrogenase; Validated 92.69
TIGR01761343 thiaz-red thiazolinyl imide reductase. This reduct 91.41
KOG1255329 consensus Succinyl-CoA synthetase, alpha subunit [ 91.25
PF02593217 dTMP_synthase: Thymidylate synthase; InterPro: IPR 90.86
PRK09436819 thrA bifunctional aspartokinase I/homoserine dehyd 88.61
TIGR03376342 glycerol3P_DH glycerol-3-phosphate dehydrogenase ( 88.29
PF00107130 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: 87.72
PF13407257 Peripla_BP_4: Periplasmic binding protein domain; 87.23
PF01210157 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate 86.89
PRK14618328 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 86.65
PRK08223287 hypothetical protein; Validated 84.19
COG0240329 GpsA Glycerol-3-phosphate dehydrogenase [Energy pr 83.66
TIGR03215285 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati 83.03
PRK08300302 acetaldehyde dehydrogenase; Validated 83.03
PLN02700377 homoserine dehydrogenase family protein 82.15
PF00899135 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a 80.49
PTZ00345365 glycerol-3-phosphate dehydrogenase; Provisional 80.11
COG1832140 Predicted CoA-binding protein [General function pr 80.11
PF1273863 PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2W 80.02
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=9.6e-73  Score=494.34  Aligned_cols=202  Identities=29%  Similarity=0.399  Sum_probs=186.8

Q ss_pred             CCCccccccCHHHHHhcccCCCCCcEEEECCChhhHHHHHHHHHHcCCcEEEecCCCChhhHHHHHHHhhccCceEEEcc
Q 027747            3 QPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAP   82 (219)
Q Consensus         3 ~~~~~~v~~~l~~~l~~~~~~~~~DVvIDFS~p~~~~~~~~~~~~~g~p~ViGTTG~~~~~~~~l~~~a~~~~~~vv~sp   82 (219)
                      +++|+++++++.....      .+||+||||+|+++.+++++|+++++++|||||||+++|++.|+++++  ++|+|+||
T Consensus        53 ~~~gv~v~~~~~~~~~------~~DV~IDFT~P~~~~~~l~~~~~~~~~lVIGTTGf~~e~~~~l~~~a~--~v~vv~a~  124 (266)
T COG0289          53 GLLGVPVTDDLLLVKA------DADVLIDFTTPEATLENLEFALEHGKPLVIGTTGFTEEQLEKLREAAE--KVPVVIAP  124 (266)
T ss_pred             cccCceeecchhhccc------CCCEEEECCCchhhHHHHHHHHHcCCCeEEECCCCCHHHHHHHHHHHh--hCCEEEec
Confidence            5688999999766654      799999999999999999999999999999999999999999999994  49999999


Q ss_pred             ChhHHHHHHHHHHHHHhhhc--CCeEEEecCCC-CCCCCcHHHHHHHHHHHhcCc-------ccCCCccccccccccccC
Q 027747           83 TLSIGSILLQQAAISASFHY--KNVEIVESRPN-ARDFPSPDATQIANNLSNLGQ-------IYNREDISTDVKARGQVL  152 (219)
Q Consensus        83 NfSlGv~ll~~~~~~aa~~~--~dieIiE~Hh~-K~DaPSGTA~~la~~i~~~~~-------~~~~~~~~~~~~~r~~~~  152 (219)
                      |||+|+|||+++++.|+++|  ||+||+|+||| |+|||||||++|++.|++.+.       +|+|++.+   |+|    
T Consensus       125 NfSiGvnll~~l~~~aak~l~~~DiEIiE~HHr~K~DAPSGTAl~lae~ia~~~~~~~~~~~v~~r~G~~---g~r----  197 (266)
T COG0289         125 NFSLGVNLLFKLAEQAAKVLDDYDIEIIEAHHRHKKDAPSGTALKLAEAIAEARGQDLKDEAVYGREGAT---GAR----  197 (266)
T ss_pred             cchHHHHHHHHHHHHHHHhcCCCCEEehhhhcccCCCCCcHHHHHHHHHHHHhhccccccceeecccCCc---CCC----
Confidence            99999999999999999999  59999999997 999999999999999999653       35566543   455    


Q ss_pred             CCCceeEEEEEcCCCceEEEEEEccCCcEEEEEEeecCccccHHHHHHHHHHhhcCCCeeeeccccC
Q 027747          153 GEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL  219 (219)
Q Consensus       153 ~~~~i~ihS~R~g~ivg~H~V~f~~~~E~i~i~H~a~sR~~Fa~Gal~Aa~~l~~~~~g~y~m~dvL  219 (219)
                      .+++|+|||+|+|+++|+|+|+|.++||+|+|+|+|.||.+||+||++||+|+.++++|+|+|+|||
T Consensus       198 ~~~~Igi~svR~G~ivG~H~V~F~~~GE~iei~H~A~sR~~Fa~Gal~aa~wi~~k~~g~Y~m~dvL  264 (266)
T COG0289         198 KEGEIGIHSVRGGDIVGEHEVIFAGEGERIEIRHRATSRDSFARGALLAARWLVGKPPGLYDMEDVL  264 (266)
T ss_pred             CCCCceeEEeecCCcceeEEEEEecCCcEEEEEEeeccHHHHHHHHHHHHHHHhCCCCCccchHHhh
Confidence            4579999999999999999999999999999999999999999999999999999989999999997

>TIGR00036 dapB dihydrodipicolinate reductase Back     alignment and domain information
>PRK00048 dihydrodipicolinate reductase; Provisional Back     alignment and domain information
>TIGR02130 dapB_plant dihydrodipicolinate reductase Back     alignment and domain information
>PLN02775 Probable dihydrodipicolinate reductase Back     alignment and domain information
>PF05173 DapB_C: Dihydrodipicolinate reductase, C-terminus; InterPro: IPR022663 This entry represents the C-terminal region of Dihydrodipicolinate reductase Back     alignment and domain information
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] Back     alignment and domain information
>PRK08374 homoserine dehydrogenase; Provisional Back     alignment and domain information
>PRK13303 L-aspartate dehydrogenase; Provisional Back     alignment and domain information
>TIGR03855 NAD_NadX aspartate dehydrogenase Back     alignment and domain information
>PF03447 NAD_binding_3: Homoserine dehydrogenase, NAD binding domain; InterPro: IPR005106 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway Back     alignment and domain information
>PRK13304 L-aspartate dehydrogenase; Reviewed Back     alignment and domain information
>PRK13301 putative L-aspartate dehydrogenase; Provisional Back     alignment and domain information
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot Back     alignment and domain information
>PRK06270 homoserine dehydrogenase; Provisional Back     alignment and domain information
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated Back     alignment and domain information
>PRK13302 putative L-aspartate dehydrogenase; Provisional Back     alignment and domain information
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit Back     alignment and domain information
>PTZ00187 succinyl-CoA synthetase alpha subunit; Provisional Back     alignment and domain information
>PRK06349 homoserine dehydrogenase; Provisional Back     alignment and domain information
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha Back     alignment and domain information
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only] Back     alignment and domain information
>PLN02522 ATP citrate (pro-S)-lyase Back     alignment and domain information
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A Back     alignment and domain information
>PRK11579 putative oxidoreductase; Provisional Back     alignment and domain information
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion] Back     alignment and domain information
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain Back     alignment and domain information
>PRK10206 putative oxidoreductase; Provisional Back     alignment and domain information
>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase Back     alignment and domain information
>PRK06091 membrane protein FdrA; Validated Back     alignment and domain information
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only] Back     alignment and domain information
>PRK06392 homoserine dehydrogenase; Provisional Back     alignment and domain information
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase Back     alignment and domain information
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] Back     alignment and domain information
>PRK06813 homoserine dehydrogenase; Validated Back     alignment and domain information
>TIGR01761 thiaz-red thiazolinyl imide reductase Back     alignment and domain information
>KOG1255 consensus Succinyl-CoA synthetase, alpha subunit [Energy production and conversion] Back     alignment and domain information
>PF02593 dTMP_synthase: Thymidylate synthase; InterPro: IPR003745 This entry describes proteins of unknown function Back     alignment and domain information
>PRK09436 thrA bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional Back     alignment and domain information
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)) Back     alignment and domain information
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 Back     alignment and domain information
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A Back     alignment and domain information
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate Back     alignment and domain information
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK08223 hypothetical protein; Validated Back     alignment and domain information
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] Back     alignment and domain information
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating) Back     alignment and domain information
>PRK08300 acetaldehyde dehydrogenase; Validated Back     alignment and domain information
>PLN02700 homoserine dehydrogenase family protein Back     alignment and domain information
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP Back     alignment and domain information
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>COG1832 Predicted CoA-binding protein [General function prediction only] Back     alignment and domain information
>PF12738 PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2WT8_C 3EF1_A 3EF0_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query219
1yl5_A247 Crystal Structure Of Mycobacterium Tuberculosis Dih 1e-17
1yl6_A245 Crystal Structure Of Mycobacterium Tuberculosis Dih 2e-17
1c3v_A245 Dihydrodipicolinate Reductase From Mycobacterium Tu 2e-17
>pdb|1YL5|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Dihydrodipicolinate Reductase (Rv2773c) (Crystal Form A) Length = 247 Back     alignment and structure 
Iteration: 1

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 7/197 (3%)
Query: 28  VVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAF-CDKASMGCLIAPTLSI 86
           VVIDFT    V  N++     G+ +VV       E    + ++   K +   LIAP  +I
Sbjct: 50  VVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAI 109
Query: 87  GSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSNL--GQIYNREDIST 143
           G++L    A  A+  + + E++E   P+  D PS  A + A  ++    G   N +  ST
Sbjct: 110 GAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATST 169
Query: 144 DV-KARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQSLMPGLILAI 202
            +  ARG  +  DG+ VH++ L GL +   V F   GE  +I+HD  D  S +PG++LA+
Sbjct: 170 SLPGARGADV--DGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAV 227
Query: 203 RKVVHLKNLVYGLEKFL 219
           R++     L  GLE  L
Sbjct: 228 RRIAERPGLTVGLEPLL 244
>pdb|1YL6|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Dihydrodipicolinate Reductase (Rv2773c) (Crystal Form B) Length = 245 Back     alignment and structure
>pdb|1C3V|A Chain A, Dihydrodipicolinate Reductase From Mycobacterium Tuberculosis Complexed With Nadph And Pdc Length = 245 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query219
1p9l_A245 Dihydrodipicolinate reductase; oxidoreductase, lys 1e-32
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* Length = 245 Back     alignment and structure
 Score =  117 bits (295), Expect = 1e-32
 Identities = 63/219 (28%), Positives = 97/219 (44%), Gaps = 20/219 (9%)

Query: 12  DLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVV----YVPHIQLETVSAL 67
           D    L  ++      VVIDFT    V  N++     G+ +VV    +    + + V + 
Sbjct: 33  DAGDPLSLLTDGNT-EVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAE-RFQQVESW 90

Query: 68  SAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVES-RPNARDFPSPDATQ-- 124
                K +   LIAP  +IG++L    A  A+  + + E++E   P+  D PS  A +  
Sbjct: 91  LV--AKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTA 148

Query: 125 --IANNLSNLGQ--IYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGE 180
             IA     L          +     ARG     DG+ VH++ L GL +   V F   GE
Sbjct: 149 KLIAEARKGLPPNPDATSTSL---PGARGAD--VDGIPVHAVRLAGLVAHQEVLFGTEGE 203

Query: 181 VYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
             +I+HD  D  S +PG++LA+R++     L  GLE  L
Sbjct: 204 TLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLL 242
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query219
3ijp_A288 DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, 100.0
4f3y_A272 DHPR, dihydrodipicolinate reductase; structural ge 100.0
3qy9_A243 DHPR, dihydrodipicolinate reductase; rossmann fold 100.0
1vm6_A228 DHPR, dihydrodipicolinate reductase; TM1520, struc 100.0
1p9l_A245 Dihydrodipicolinate reductase; oxidoreductase, lys 100.0
1dih_A273 Dihydrodipicolinate reductase; oxidoreductase; HET 100.0
1f06_A320 MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH 99.18
2yv2_A297 Succinyl-COA synthetase alpha chain; COA-binding d 99.01
2yv1_A294 Succinyl-COA ligase [ADP-forming] subunit alpha; C 98.98
1oi7_A288 Succinyl-COA synthetase alpha chain; SCS, ligase, 98.97
2nu8_A288 Succinyl-COA ligase [ADP-forming] subunit alpha; c 98.67
3mwd_B334 ATP-citrate synthase; ATP-grAsp, phosphohistidine, 98.3
2dc1_A236 L-aspartate dehydrogenase; NAD, oxidoreductase; HE 98.29
2fp4_A305 Succinyl-COA ligase [GDP-forming] alpha-chain, mit 97.91
3cea_A346 MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore 97.5
3ff4_A122 Uncharacterized protein; structural genomics, PSI- 97.45
3kux_A352 Putative oxidoreductase; oxidoreductase family, cs 97.37
2glx_A332 1,5-anhydro-D-fructose reductase; NADP(H) dependen 97.36
3bio_A304 Oxidoreductase, GFO/IDH/MOCA family; structural ge 97.31
3e9m_A330 Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, 97.31
3ing_A325 Homoserine dehydrogenase; NP_394635.1, structural 97.3
1j5p_A253 Aspartate dehydrogenase; TM1643, structural genomi 97.29
4hkt_A331 Inositol 2-dehydrogenase; structural genomics, nys 97.24
3euw_A344 MYO-inositol dehydrogenase; protein structure init 97.23
3evn_A329 Oxidoreductase, GFO/IDH/MOCA family; structural ge 97.23
3upl_A 446 Oxidoreductase; rossmann fold, NADPH binding; 1.50 97.22
1tlt_A319 Putative oxidoreductase (virulence factor MVIM HO; 97.21
1ydw_A362 AX110P-like protein; structural genomics, protein 97.21
3e82_A364 Putative oxidoreductase; NAD, GFO/IDH/MOCA family, 97.19
3q2i_A354 Dehydrogenase; rossmann fold, UDP-sugar binding, N 97.19
3i23_A349 Oxidoreductase, GFO/IDH/MOCA family; structural ge 97.15
2d59_A144 Hypothetical protein PH1109; COA binding, structur 97.13
3fhl_A362 Putative oxidoreductase; NAD-binding domain, PSI-2 97.12
3pff_A829 ATP-citrate synthase; phosphohistidine, organic ac 97.11
3moi_A 387 Probable dehydrogenase; structural genomics, PSI2, 97.07
3do5_A327 HOM, homoserine dehydrogenase; NP_069768.1, putati 97.04
3c1a_A315 Putative oxidoreductase; ZP_00056571.1, oxidoreduc 97.02
2ho3_A325 Oxidoreductase, GFO/IDH/MOCA family; streptococcus 97.02
3db2_A354 Putative NADPH-dependent oxidoreductase; two domai 97.02
3gdo_A358 Uncharacterized oxidoreductase YVAA; structural ge 97.01
3e18_A359 Oxidoreductase; dehydrogenase, NAD-binding, struct 97.0
4ew6_A330 D-galactose-1-dehydrogenase protein; nysgrc, PSI-b 96.96
1h6d_A433 Precursor form of glucose-fructose oxidoreductase; 96.95
3rc1_A350 Sugar 3-ketoreductase; sugar biosynthesis, TDP bin 96.93
3ezy_A344 Dehydrogenase; structural genomics, unknown functi 96.91
3mz0_A344 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; 96.81
3oqb_A 383 Oxidoreductase; structural genomics, protein struc 96.76
3c8m_A331 Homoserine dehydrogenase; structural genomics, APC 96.76
3mtj_A 444 Homoserine dehydrogenase; rossmann-fold, PSI, MCSG 96.68
3uuw_A308 Putative oxidoreductase with NAD(P)-binding rossm 96.64
1iuk_A140 Hypothetical protein TT1466; structural genomics, 96.55
3f4l_A345 Putative oxidoreductase YHHX; structural genomics, 96.54
3ec7_A357 Putative dehydrogenase; alpha-beta, structural gen 96.46
1y81_A138 Conserved hypothetical protein; hyperthermophIle, 96.46
1zh8_A340 Oxidoreductase; TM0312, structural genomics, JO ce 96.4
3ohs_X334 Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; d 96.34
3m2t_A359 Probable dehydrogenase; PSI, SGXNY, structural gen 96.34
3u3x_A361 Oxidoreductase; structural genomics, PSI-biology, 96.27
3btv_A 438 Galactose/lactose metabolism regulatory protein GA 96.18
2p2s_A336 Putative oxidoreductase; YP_050235.1, structural g 96.11
1lc0_A294 Biliverdin reductase A; oxidoreductase, tetrapyrro 96.06
3dmy_A 480 Protein FDRA; predicted actyl-COA synthetase, nysg 95.97
3o9z_A312 Lipopolysaccaride biosynthesis protein WBPB; oxido 95.86
2ixa_A 444 Alpha-N-acetylgalactosaminidase; NAD, A-ECO conver 95.78
2csu_A 457 457AA long hypothetical protein; structural genomi 95.71
3v5n_A 417 Oxidoreductase; structural genomics, PSI-biology, 95.64
3oa2_A318 WBPB; oxidoreductase, sugar biosynthesis, dehydrog 95.6
4had_A350 Probable oxidoreductase protein; structural genomi 95.57
1xea_A323 Oxidoreductase, GFO/IDH/MOCA family; structural ge 95.55
2duw_A145 Putative COA-binding protein; ligand binding prote 95.3
4ina_A 405 Saccharopine dehydrogenase; structural genomics, P 95.26
3dty_A 398 Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetram 95.24
2nvw_A 479 Galactose/lactose metabolism regulatory protein GA 95.22
3ip3_A337 Oxidoreductase, putative; structural genomics, PSI 95.2
4fb5_A 393 Probable oxidoreductase protein; PSI-biology, nysg 95.17
4gmf_A 372 Yersiniabactin biosynthetic protein YBTU; rossmann 95.14
4gqa_A 412 NAD binding oxidoreductase; structural genomics, P 94.86
2g0t_A350 Conserved hypothetical protein; structural genomic 94.59
1ebf_A358 Homoserine dehydrogenase; dinucleotide, NAD, dimer 93.21
2ejw_A332 HDH, homoserine dehydrogenase; NAD-dependent, oxid 92.74
2z2v_A365 Hypothetical protein PH1688; L-lysine dehydrogenas 92.71
4h3v_A 390 Oxidoreductase domain protein; structural genomics 91.46
3abi_A365 Putative uncharacterized protein PH1688; L-lysine 91.33
2obn_A349 Hypothetical protein; structural genomics, joint c 89.68
1b7g_O340 Protein (glyceraldehyde 3-phosphate dehydrogenase; 89.19
4djd_C 446 C/Fe-SP, corrinoid/iron-sulfur protein large subun 86.62
3k96_A356 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA 84.91
2czc_A334 Glyceraldehyde-3-phosphate dehydrogenase; glycolys 84.67
3d1l_A266 Putative NADP oxidoreductase BF3122; structural ge 83.81
2h9a_A 445 Carbon monoxide dehydrogenase corrinoid/iron- sulf 82.87
3ic5_A118 Putative saccharopine dehydrogenase; structural ge 82.86
2yci_X271 5-methyltetrahydrofolate corrinoid/iron sulfur PR 82.66
1cf2_P337 Protein (glyceraldehyde-3-phosphate dehydrogenase) 82.66
2h78_A302 Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 81.09
1f6y_A262 5-methyltetrahydrofolate corrinoid/iron sulfur PR 80.36
2gf2_A296 Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct 80.06
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} Back     alignment and structure
Probab=100.00  E-value=1.5e-69  Score=482.12  Aligned_cols=201  Identities=14%  Similarity=0.137  Sum_probs=187.4

Q ss_pred             CCccccccCHHHHHhcccCCCCCcEEEECCChhhHHHHHHHHHHcCCcEEEecCCCChhhHHHHHHHhhccCceEEEccC
Q 027747            4 PLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPT   83 (219)
Q Consensus         4 ~~~~~v~~~l~~~l~~~~~~~~~DVvIDFS~p~~~~~~~~~~~~~g~p~ViGTTG~~~~~~~~l~~~a~~~~~~vv~spN   83 (219)
                      ++|+++++|+++++.      ++||+||||.|+++.+++++|+++|+|+|+|||||+++++++|+++|  +++|+|||||
T Consensus        73 ~~gv~v~~dl~~ll~------~aDVvIDFT~p~a~~~~~~~~l~~Gv~vViGTTG~~~e~~~~L~~aa--~~~~~~~a~N  144 (288)
T 3ijp_A           73 FLGVRITDDPESAFS------NTEGILDFSQPQASVLYANYAAQKSLIHIIGTTGFSKTEEAQIADFA--KYTTIVKSGN  144 (288)
T ss_dssp             CCSCBCBSCHHHHTT------SCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHH--TTSEEEECSC
T ss_pred             cCCceeeCCHHHHhc------CCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHh--CcCCEEEECC
Confidence            579999999999986      69999999999999999999999999999999999999999999999  5599999999


Q ss_pred             hhHHHHHHHHHHHHHhhhc---CCeEEEecCCC-CCCCCcHHHHHHHHHHHhcC-------cccCCCccccccccccccC
Q 027747           84 LSIGSILLQQAAISASFHY---KNVEIVESRPN-ARDFPSPDATQIANNLSNLG-------QIYNREDISTDVKARGQVL  152 (219)
Q Consensus        84 fSlGv~ll~~~~~~aa~~~---~dieIiE~Hh~-K~DaPSGTA~~la~~i~~~~-------~~~~~~~~~~~~~~r~~~~  152 (219)
                      ||+|+|||+++++.+|++|   ||+||+|+||+ |+|||||||++|++.|++.+       .+|+|++..   ++|    
T Consensus       145 ~SiGv~ll~~l~~~aa~~l~~~~dieIiE~HH~~K~DaPSGTA~~la~~i~~~~~~~~~~~~~~~r~g~~---g~r----  217 (288)
T 3ijp_A          145 MSLGVNLLANLVKRAAKALDDDFDIEIYEMHHANKVDSPSGTALLLGQAAAEGRNIMLKNVSVNGRSGHT---GKR----  217 (288)
T ss_dssp             CCHHHHHHHHHHHHHHHHSCTTSEEEEEEEECTTCCCSSCHHHHHHHHHHHHHTTSCHHHHEEECGGGCC---SCC----
T ss_pred             CcHHHHHHHHHHHHHHHhcCCCCCEEEEEccCCCCCCCCCHHHHHHHHHHHHHhCCCccccccccccccc---CCc----
Confidence            9999999999999999998   59999999997 99999999999999998743       346676543   566    


Q ss_pred             CCCceeEEEEEcCCCceEEEEEEccCCcEEEEEEeecCccccHHHHHHHHHHhhcCCCeeeeccccC
Q 027747          153 GEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL  219 (219)
Q Consensus       153 ~~~~i~ihS~R~g~ivg~H~V~f~~~~E~i~i~H~a~sR~~Fa~Gal~Aa~~l~~~~~g~y~m~dvL  219 (219)
                      ++++|+|||+|+|+++|+|+|+|++++|+|||+|++.||++||+||++||+|+.++++|+|+|+|||
T Consensus       218 ~~~~i~i~s~R~g~ivg~h~V~f~~~~e~i~i~H~a~sR~~Fa~Ga~~Aa~~l~~~~~g~y~m~dvL  284 (288)
T 3ijp_A          218 EKGTIGFACSRGGTVIGDHSITFAGENERIVLSHIAQERSIFANGALKAALWAKNHENGLYSMLDVL  284 (288)
T ss_dssp             CTTCEEEEEEECTTCCEEEEEEEEETTEEEEEEEEECCTHHHHHHHHHHHHHHTTCCSEEECHHHHH
T ss_pred             CCCCccEEEEECCCCCEEEEEEecCCCcEEEEEEEeCcHHHHHHHHHHHHHHHhcCCCcEEeHHHHh
Confidence            4589999999999999999999999999999999999999999999999999999999999999986
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} Back     alignment and structure
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} Back     alignment and structure
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 Back     alignment and structure
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* Back     alignment and structure
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* Back     alignment and structure
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A* Back     alignment and structure
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix} Back     alignment and structure
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii} Back     alignment and structure
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1 Back     alignment and structure
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A* Back     alignment and structure
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B* Back     alignment and structure
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus} Back     alignment and structure
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A* Back     alignment and structure
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1} Back     alignment and structure
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis} Back     alignment and structure
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens} Back     alignment and structure
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis} Back     alignment and structure
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis} Back     alignment and structure
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum} Back     alignment and structure
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A* Back     alignment and structure
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti} Back     alignment and structure
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum} Back     alignment and structure
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V} Back     alignment and structure
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A* Back     alignment and structure
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5 Back     alignment and structure
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A Back     alignment and structure
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp} Back     alignment and structure
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A* Back     alignment and structure
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A Back     alignment and structure
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A* Back     alignment and structure
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343} Back     alignment and structure
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens} Back     alignment and structure
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica} Back     alignment and structure
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus} Back     alignment and structure
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum} Back     alignment and structure
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2} Back     alignment and structure
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A Back     alignment and structure
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua} Back     alignment and structure
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli} Back     alignment and structure
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A* Back     alignment and structure
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A* Back     alignment and structure
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima} Back     alignment and structure
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A* Back     alignment and structure
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum} Back     alignment and structure
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A* Back     alignment and structure
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans} Back     alignment and structure
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile} Back     alignment and structure
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A Back     alignment and structure
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12} Back     alignment and structure
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium} Back     alignment and structure
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 Back     alignment and structure
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5 Back     alignment and structure
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X Back     alignment and structure
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum} Back     alignment and structure
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti} Back     alignment and structure
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A Back     alignment and structure
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043} Back     alignment and structure
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A* Back     alignment and structure
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli} Back     alignment and structure
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A* Back     alignment and structure
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A* Back     alignment and structure
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1 Back     alignment and structure
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti} Back     alignment and structure
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa} Back     alignment and structure
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli} Back     alignment and structure
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5 Back     alignment and structure
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} Back     alignment and structure
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} Back     alignment and structure
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV} Back     alignment and structure
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A Back     alignment and structure
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima} Back     alignment and structure
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli} Back     alignment and structure
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A* Back     alignment and structure
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae} Back     alignment and structure
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10 Back     alignment and structure
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A* Back     alignment and structure
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus} Back     alignment and structure
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida} Back     alignment and structure
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} Back     alignment and structure
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis} Back     alignment and structure
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1 Back     alignment and structure
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C* Back     alignment and structure
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} Back     alignment and structure
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1 Back     alignment and structure
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} Back     alignment and structure
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A* Back     alignment and structure
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Back     alignment and structure
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X* Back     alignment and structure
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1 Back     alignment and structure
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A* Back     alignment and structure
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 219
d1yl7a2109 d.81.1.3 (A:106-214) Dihydrodipicolinate reductase 2e-21
d1diha2110 d.81.1.3 (A:131-240) Dihydrodipicolinate reductase 2e-06
d1yl7a1135 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate re 2e-04
d1vm6a286 d.81.1.3 (A:97-182) Dihydrodipicolinate reductase 0.002
>d1yl7a2 d.81.1.3 (A:106-214) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 109 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: FwdE/GAPDH domain-like
superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
family: Dihydrodipicolinate reductase-like
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 83.1 bits (205), Expect = 2e-21
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 2/108 (1%)

Query: 85  SIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSNLGQIYNREDIST 143
           +IG++L    A  A+  + + E++E   P+  D PS  A + A  ++   +       +T
Sbjct: 1   AIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDAT 60

Query: 144 DVKARGQVLG-EDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITD 190
                G      DG+ VH++ L GL +   V F   GE  +I+HD  D
Sbjct: 61  STSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLD 108
>d1diha2 d.81.1.3 (A:131-240) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} Length = 110 Back     information, alignment and structure
>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 135 Back     information, alignment and structure
>d1vm6a2 d.81.1.3 (A:97-182) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} Length = 86 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query219
d1yl7a2109 Dihydrodipicolinate reductase {Mycobacterium tuber 100.0
d1diha2110 Dihydrodipicolinate reductase {Escherichia coli [T 100.0
d1vm6a286 Dihydrodipicolinate reductase {Thermotoga maritima 100.0
d1yl7a1135 Dihydrodipicolinate reductase {Mycobacterium tuber 99.97
d1diha1162 Dihydrodipicolinate reductase {Escherichia coli [T 99.96
d1vm6a3128 Dihydrodipicolinate reductase {Thermotoga maritima 99.91
d1j5pa4132 Hypothetical protein TM1643 {Thermotoga maritima [ 98.35
d1tlta1164 Virulence factor MviM {Escherichia coli [TaxId: 56 97.04
d1ydwa1184 Probable oxidoreductase At4g09670 {Thale cress (Ar 97.0
d1y81a1116 Hypothetical protein PF0725 {Pyrococcus furiosus [ 96.97
d1oi7a1121 Succinyl-CoA synthetase, alpha-chain, N-terminal ( 96.95
d2csua1129 Acetate-CoA ligase alpha chain, AcdA, N-terminal d 96.9
d2nu7a1119 Succinyl-CoA synthetase, alpha-chain, N-terminal ( 96.88
d1zh8a1181 Hypothetical protein TM0312 {Thermotoga maritima [ 96.81
d1f06a1170 Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb 96.81
d1iuka_136 Hypothetical protein TT1466 {Thermus thermophilus 96.55
d1xeaa1167 Putative oxidoreductase VCA1048 {Vibrio cholerae [ 96.36
d1h6da1221 Glucose-fructose oxidoreductase, N-terminal domain 96.32
d1euca1130 Succinyl-CoA synthetase, alpha-chain, N-terminal ( 95.98
d2d59a1139 Hypothetical protein PH1109 {Pyrococcus horikoshii 95.9
d1lc0a1172 Biliverdin reductase {Rat (Rattus norvegicus) [Tax 95.18
d2nvwa1237 Galactose/lactose metabolism regulatory protein GA 94.59
d1n1ea2189 Glycerol-3- phosphate dehydrogenase {Trypanosome ( 90.29
d1ko7a1129 HPr kinase/phoshatase HprK N-terminal domain {Stap 88.92
d1b7go1178 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 87.37
d2czca2172 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 86.34
d1knxa1132 HPr kinase/phoshatase HprK N-terminal domain {Myco 83.57
d1cf2o1171 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { 81.62
d1j4aa2134 D-lactate dehydrogenase {Lactobacillus helveticus 80.18
>d1yl7a2 d.81.1.3 (A:106-214) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: FwdE/GAPDH domain-like
superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
family: Dihydrodipicolinate reductase-like
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=9.1e-36  Score=228.75  Aligned_cols=105  Identities=29%  Similarity=0.398  Sum_probs=88.4

Q ss_pred             hHHHHHHHHHHHHHhhhcCCeEEEecCCC-CCCCCcHHHHHHHHHHHhcCcccCCCcc---ccccccccccCCCCceeEE
Q 027747           85 SIGSILLQQAAISASFHYKNVEIVESRPN-ARDFPSPDATQIANNLSNLGQIYNREDI---STDVKARGQVLGEDGVRVH  160 (219)
Q Consensus        85 SlGv~ll~~~~~~aa~~~~dieIiE~Hh~-K~DaPSGTA~~la~~i~~~~~~~~~~~~---~~~~~~r~~~~~~~~i~ih  160 (219)
                      |||+|||+++++.++++|+|+||+|+||+ |+|+|||||++||+.|++.+........   ....+.+++  ..++|+||
T Consensus         1 SlGvnll~~l~~~aa~~~~dieI~E~HH~~K~DaPSGTAl~la~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~I~i~   78 (109)
T d1yl7a2           1 AIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGA--DVDGIPVH   78 (109)
T ss_dssp             CHHHHHHHHHHHHHGGGCSEEEEEEEECTTCCEESCHHHHHHHHHHHHHTTTSCCCCCCCCEECTTTTCE--EETTEEEE
T ss_pred             ChHHHHHHHHHHHHHhhCCCcEEEEcccccCCCCCchhHHHHHHHHHHhhcccccccceeEeccccccCC--ccCCceEE
Confidence            89999999999999999999999999997 9999999999999999986432221111   111234433  34889999


Q ss_pred             EEEcCCCceEEEEEEccCCcEEEEEEeecCc
Q 027747          161 SMVLPGLPSSTTVYFSRPGEVYSIKHDITDV  191 (219)
Q Consensus       161 S~R~g~ivg~H~V~f~~~~E~i~i~H~a~sR  191 (219)
                      |+|+|+++|+|+|+|.+++|+|+|+|+|.||
T Consensus        79 S~R~g~v~g~H~V~F~~~~E~i~l~H~a~~R  109 (109)
T d1yl7a2          79 AVRLAGLVAHQEVLFGTEGETLTIRHDSLDR  109 (109)
T ss_dssp             EEECTTCCEEEEEEEEETTEEEEEEEEECSG
T ss_pred             EEecCCCcEEEEEEEcCCCcEEEEEEEecCC
Confidence            9999999999999999999999999999998
>d1diha2 d.81.1.3 (A:131-240) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vm6a2 d.81.1.3 (A:97-182) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} Back     information, alignment and structure
>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]} Back     information, alignment and structure
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} Back     information, alignment and structure
>d1ko7a1 c.98.2.1 (A:1-129) HPr kinase/phoshatase HprK N-terminal domain {Staphylococcus xylosus [TaxId: 1288]} Back     information, alignment and structure
>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1knxa1 c.98.2.1 (A:1-132) HPr kinase/phoshatase HprK N-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]} Back     information, alignment and structure
>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} Back     information, alignment and structure
>d1j4aa2 c.23.12.1 (A:2-103,A:301-332) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} Back     information, alignment and structure