Citrus Sinensis ID: 027980

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210------
Protein Sequence
MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAIYYGGTITEGFIRGTGTLFGAYAGGFLGEERLGRFGYLVGSHLGSWAGGRIGLMIYDVVNGVHFLLQFVQSEESEAHDAPVEEKFQDYEDSYANEAPSFWNSEASEDSKASDSSLYENSESETYENSEL
Secondary Structure (PSIPRED)
ccccccEEEEcccEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHccHHHHHHHHHccccccEEEEccccccccccccccccccccccHHccccccccccccEEEEEEEEHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccccccHcEEcccccHHHHHHcccccHHHcccEEEEEcccccccHccHHEHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mgsgtvacgvkEGVKLYFYNIRAAHVERARNVAIEKAVVDALsqglssndAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAIyyggtitegfirgtgtlfgayaggflgeerlgRFGYLvgshlgswaggrIGLMIYDVVNGVHFLLQFVQseeseahdapveekFQDYEDsyaneapsfwnseasedskasdsslyensesetyensel
Flexible Loop (DISEMBL)
mgsgtvacgvkegVKLYFYNIRAAHVERARNVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAIYYGGTITEGFIRGTGTLFGAYAGGFLGEERLGRFGYLVGSHLGSWAGGRIGLMIYDVVNGVHFLLQFVQSEESEAHDAPVEEKFQDYEDSYANEAPSfwnseasedskasdsslyensesetyensel
Low Complexity Region (SEG)
MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGLSSNDaakqaqkegakaaklakrqakrIIGPIIAAGWDFFEAIYYGGTITEGFIRGTGTLFGAYAGGFLGEERLGRFGYLVGSHLGSWAGGRIGLMIYDVVNGVHFLLQFVQSEESEAHDAPVEEKFQDYEDSYANEAPSFWNseasedskasdsslyensesetyensel
Disordered region (IsUnstruct)
*****VACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDAL***************************AKRIIGPIIAAGWDFFEAIYYGGTITEGFIRGTGTLFGAYAGGFLGEERLGRFGYLVGSHLGSWAGGRIGLMIYDVVNGVHFLLQFV************************************************************
Disordered Region (DISOPRED)
******ACGVKEGVKLYFYNIRAAHVERAR*VAI**AVVD*L*************************RQAKRIIGPIIAAGWDFFEAIYYGGTITEGFIRGTGTLFGAYAGGFLGEERLGRFGYLVGSHLGSWAGGRIGLMIYDVVNGVHFLLQF*************************************************************
Disordered Region (DISEMBL)
MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQG***********************QAKRIIGPIIAAGWDFFEAIYYGGTITEGFIRGTGTLFGAYAGGFLGEERLGRFGYLVGSHLGSWAGGRIGLMIYDVVNGVHFLLQFVQS*********VEEKFQDYEDSYANEAPSFWN****************************
Disordered Region (DISPRO)
****TVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAIYYGGTITEGFIRGTGTLFGAYAGGFLGEERLGRFGYLVGSHLGSWAGGRIGLMIYDVVNGVHFLLQFVQSE*********************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAIYYGGTITEGFIRGTGTLFGAYAGGFLGEERLGRFGYLVGSHLGSWAGGRIGLMIYDVVNGVHFLLQFVQSEESEAHDAPVEEKFQDYEDSYANEAPSFWNSEASEDSKASDSSLYENSESETYENSEL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	216
356575349	266	PREDICTED: uncharacterized protein LOC10	0.976	0.793	0.689	3e-80
255646276	266	unknown [Glycine max]	0.976	0.793	0.684	9e-80
388496142	282	unknown [Lotus japonicus]	0.995	0.762	0.683	1e-79
296089775	471	unnamed protein product [Vitis vinifera]	0.888	0.407	0.730	1e-78
224123740	259	predicted protein [Populus trichocarpa]	0.888	0.741	0.705	3e-78
358248534	267	uncharacterized protein LOC100786994 pre	0.981	0.794	0.675	4e-78
255542892	264	conserved hypothetical protein [Ricinus	0.981	0.803	0.722	5e-77
225450593	242	PREDICTED: uncharacterized protein LOC10	0.879	0.785	0.738	5e-77
224125018	230	predicted protein [Populus trichocarpa]	0.824	0.773	0.752	7e-77
449454014	271	PREDICTED: uncharacterized protein LOC10	0.990	0.789	0.666	2e-76

>gi|356575349|ref|XP_003555804.1| PREDICTED: uncharacterized protein LOC100810395 [Glycine max]

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 153/222 (68%), Positives = 177/222 (79%), Gaps = 11/222 (4%)

Query: 1   MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGLSSNDAAKQAQKEGA 60
           MGSGTVAC VKEGVKLYFYNIR++H ERAR+ AIE A+VDA++QG+S  D+AK AQKEG 
Sbjct: 50  MGSGTVACAVKEGVKLYFYNIRSSHAERARSQAIESALVDAVAQGMSPTDSAKHAQKEGK 109

Query: 61  KAAKLAKRQAKRIIGPIIAAGWDFFEAIYYGGTITEGFIRGTGTLFGAYAGGFLGEERLG 120
           KAAKLA RQAKRIIGPII++GWDFFEAIYYGGT+TEGF+RGTGTLFG YAGGFLGE+RLG
Sbjct: 110 KAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLRGTGTLFGTYAGGFLGEQRLG 169

Query: 121 RFGYLVGSHLGSWAGGRIGLMIYDVVNGVHFLLQFVQSEESEAHDAPVEEKFQDYEDSYA 180
           R GYLVGSHLGSW GGRIGLM+YDVVNGVH LLQFVQ+ E+E     V EK +  E S+ 
Sbjct: 170 RIGYLVGSHLGSWVGGRIGLMVYDVVNGVHLLLQFVQTAETE-----VREKSERSESSFF 224

Query: 181 NEAPSFWNSEAS---EDSKASDSSLYENSES---ETYENSEL 216
            E P +  SE S   E     +S  Y+++E    ETYE+SEL
Sbjct: 225 GETPVYDGSEGSSVYESPLDEESYAYKSTERQSYETYEDSEL 266

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255646276|gb|ACU23622.1| unknown [Glycine max]

 Score =  301 bits (772), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 152/222 (68%), Positives = 177/222 (79%), Gaps = 11/222 (4%)

Query: 1   MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGLSSNDAAKQAQKEGA 60
           MGSGTVAC VKEGVKLYFYNIR++H ERAR+ AI+ A+VDA++QG+S  D+AK AQKEG 
Sbjct: 50  MGSGTVACAVKEGVKLYFYNIRSSHAERARSQAIKSALVDAVAQGMSPTDSAKHAQKEGK 109

Query: 61  KAAKLAKRQAKRIIGPIIAAGWDFFEAIYYGGTITEGFIRGTGTLFGAYAGGFLGEERLG 120
           KAAKLA RQAKRIIGPII++GWDFFEAIYYGGT+TEGF+RGTGTLFG YAGGFLGE+RLG
Sbjct: 110 KAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLRGTGTLFGTYAGGFLGEQRLG 169

Query: 121 RFGYLVGSHLGSWAGGRIGLMIYDVVNGVHFLLQFVQSEESEAHDAPVEEKFQDYEDSYA 180
           R GYLVGSHLGSW GGRIGLM+YDVVNGVH LLQFVQ+ E+E     V EK +  E S+ 
Sbjct: 170 RIGYLVGSHLGSWVGGRIGLMVYDVVNGVHLLLQFVQTAETE-----VREKSERSESSFF 224

Query: 181 NEAPSFWNSEAS---EDSKASDSSLYENSES---ETYENSEL 216
            E P +  SE S   E     +S  Y+++E    ETYE+SEL
Sbjct: 225 GETPVYDGSEGSSVYESPLDEESYAYKSTERQSYETYEDSEL 266

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388496142|gb|AFK36137.1| unknown [Lotus japonicus]

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 151/221 (68%), Positives = 177/221 (80%), Gaps = 6/221 (2%)

Query: 1   MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGLSSNDAAKQAQKEGA 60
           MGSGTVACGVKEGVKLYFYNIR+AHVERAR+ AIE A+VDA+SQG+S  D+A   QKE  
Sbjct: 50  MGSGTVACGVKEGVKLYFYNIRSAHVERARHRAIESALVDAVSQGMSPKDSATYVQKESK 109

Query: 61  KAAKLAKRQAKRIIGPIIAAGWDFFEAIYYGGTITEGFIRGTGTLFGAYAGGFLGEERLG 120
           KAAKLA RQAKRIIGPII++GWDFFEAIYYGGT+TEGF+RGTGTLFGAY GGFLGE++LG
Sbjct: 110 KAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLRGTGTLFGAYGGGFLGEQKLG 169

Query: 121 RFGYLVGSHLGSWAGGRIGLMIYDVVNGVHFLLQFVQSEESEAHDAPVEEKFQDYEDSYA 180
           RFGYLVGSHLGSW GGRIGLM+YDV NGV+ LLQFVQ+ E E H A   E  +  E  + 
Sbjct: 170 RFGYLVGSHLGSWVGGRIGLMVYDVFNGVNLLLQFVQTGEIEVHKASANENSEAPEGYFF 229

Query: 181 NEAPSFWNSEAS---EDSKASDSSLYENS---ESETYENSE 215
            E P + +SE S   E S + +S++YE+S   ES  YE++E
Sbjct: 230 GEIPVYDSSEGSNIYESSPSEESNIYESSPSEESNAYESTE 270

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089775|emb|CBI39594.3| unnamed protein product [Vitis vinifera]

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 144/197 (73%), Positives = 167/197 (84%), Gaps = 5/197 (2%)

Query: 1   MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGLSSNDAAKQAQKEGA 60
           M SGT+AC VKEGVKLYFYNIRA HVE+AR+ AIE A+ DAL+QGL++ DAAK AQKEGA
Sbjct: 50  MSSGTLACTVKEGVKLYFYNIRAVHVEKARHHAIEGALSDALTQGLNAKDAAKHAQKEGA 109

Query: 61  KAAKLAKRQAKRIIGPIIAAGWDFFEAIYYGGTITEGFIRGTGTLFGAYAGGFLGEERLG 120
           KAAKLA RQAKRIIGPII++GWDFFEAIYYGGT+TEGF+RGTGTLFGAY GGFLGE+RLG
Sbjct: 110 KAAKLATRQAKRIIGPIISSGWDFFEAIYYGGTLTEGFLRGTGTLFGAYTGGFLGEQRLG 169

Query: 121 RFGYLVGSHLGSWAGGRIGLMIYDVVNGVHFLLQFVQSEESEAHDAPVEEKFQDYEDSYA 180
           RFGYLVGSHLGSW GGRIGLMIYDV NGV FLLQ VQ EE+     P++   +  ED  +
Sbjct: 170 RFGYLVGSHLGSWVGGRIGLMIYDVANGVQFLLQSVQPEET-----PMDMSSEVPEDPGS 224

Query: 181 NEAPSFWNSEASEDSKA 197
            E+P++ +SEA EDS++
Sbjct: 225 YESPAYESSEAQEDSES 241

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123740|ref|XP_002330196.1| predicted protein [Populus trichocarpa] gi|222871652|gb|EEF08783.1| predicted protein [Populus trichocarpa]

 Score =  296 bits (759), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 139/197 (70%), Positives = 165/197 (83%), Gaps = 5/197 (2%)

Query: 1   MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGLSSNDAAKQAQKEGA 60
           MGSGT+AC VKEGVKLYFYNIR++HVERARN+AIE++++D + QG+ + D AK AQKEGA
Sbjct: 50  MGSGTLACAVKEGVKLYFYNIRSSHVERARNLAIERSLLDTIGQGMPAQDVAKTAQKEGA 109

Query: 61  KAAKLAKRQAKRIIGPIIAAGWDFFEAIYYGGTITEGFIRGTGTLFGAYAGGFLGEERLG 120
           KAAKLAKRQ KRIIGP+I++GWDFFEA+YYGGT+TEGF+RG+GTL GAYAGGF GEERLG
Sbjct: 110 KAAKLAKRQTKRIIGPVISSGWDFFEALYYGGTVTEGFLRGSGTLAGAYAGGFFGEERLG 169

Query: 121 RFGYLVGSHLGSWAGGRIGLMIYDVVNGVHFLLQFVQSEESEAHDAPVEEKFQDYEDSYA 180
           R GYLVGSHLGSW GGRIGLM+YDVVNGVH+LLQFVQ E+ E H+ P  E F+  EDS  
Sbjct: 170 RVGYLVGSHLGSWVGGRIGLMVYDVVNGVHYLLQFVQGEDGEVHETPTYENFEVSEDS-- 227

Query: 181 NEAPSFWNSEASEDSKA 197
                + + EAS+DS  
Sbjct: 228 ---QGYTSYEASKDSNV 241

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248534|ref|NP_001239898.1| uncharacterized protein LOC100786994 precursor [Glycine max] gi|255639709|gb|ACU20148.1| unknown [Glycine max]

 Score =  296 bits (758), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 150/222 (67%), Positives = 176/222 (79%), Gaps = 10/222 (4%)

Query: 1   MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGLSSNDAAKQAQKEGA 60
           MGSGTVAC VKEGVKLYFYNIR++H ERAR+ AIE A+VDA++QG+S  D+AK AQKEG 
Sbjct: 50  MGSGTVACAVKEGVKLYFYNIRSSHAERARSQAIESALVDAVTQGMSPTDSAKHAQKEGK 109

Query: 61  KAAKLAKRQAKRIIGPIIAAGWDFFEAIYYGGTITEGFIRGTGTLFGAYAGGFLGEERLG 120
           KAAKLA RQAKRIIGPII++GWDFFEAIYYGGT+TEGF+RGTGTLFG YAGGFLGE+RLG
Sbjct: 110 KAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLRGTGTLFGTYAGGFLGEQRLG 169

Query: 121 RFGYLVGSHLGSWAGGRIGLMIYDVVNGVHFLLQFVQSEESEAHDAPVEEKFQDYEDSYA 180
           R GYL+GSHLGSW GGRIGLM+YDVVNGVH LLQFVQ+ E E H+     +      S+ 
Sbjct: 170 RIGYLLGSHLGSWVGGRIGLMVYDVVNGVHLLLQFVQTGEIEVHEKSKRSE----SSSFF 225

Query: 181 NEAPSFWNSEAS---EDSKASDSSLYENSES---ETYENSEL 216
            E P + +SE S   E   + +S  YE++E    ETYE+SEL
Sbjct: 226 GETPVYDSSEGSGVYESPPSEESYAYESTERQSYETYEDSEL 267

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542892|ref|XP_002512509.1| conserved hypothetical protein [Ricinus communis] gi|223548470|gb|EEF49961.1| conserved hypothetical protein [Ricinus communis]

 Score =  293 bits (749), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 156/216 (72%), Positives = 181/216 (83%), Gaps = 4/216 (1%)

Query: 1   MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGLSSNDAAKQAQKEGA 60
           M +GT+AC VKEGVKLYFYNIR+AHVE ARN+AIE+A++DAL QG+++ DAAKQAQKEGA
Sbjct: 52  MSTGTLACTVKEGVKLYFYNIRSAHVESARNLAIERALLDALGQGMAAKDAAKQAQKEGA 111

Query: 61  KAAKLAKRQAKRIIGPIIAAGWDFFEAIYYGGTITEGFIRGTGTLFGAYAGGFLGEERLG 120
           KAAKLA RQAKRIIGPII++GWDFFEA+YYGGTITEGF+RGTGTL GAYAGGFLGE RLG
Sbjct: 112 KAAKLATRQAKRIIGPIISSGWDFFEALYYGGTITEGFLRGTGTLGGAYAGGFLGEARLG 171

Query: 121 RFGYLVGSHLGSWAGGRIGLMIYDVVNGVHFLLQFVQSEESEAHDAPVEEKFQDYEDSYA 180
           RFGYLVGSHLGSW GGRIGLM+YDVVNGVH+LLQ  Q+ +SE H+    EK    EDS  
Sbjct: 172 RFGYLVGSHLGSWVGGRIGLMVYDVVNGVHYLLQVFQAGDSEVHEN--YEKVVVSEDSPV 229

Query: 181 NEAPSFWNSEASEDSKASDSSLYENSESETYENSEL 216
            E+  + NSEASEDS   ++  YE+SES  Y+NSE 
Sbjct: 230 YESSEYTNSEASEDSNVYEAPPYESSES--YDNSEF 263

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225450593|ref|XP_002282180.1| PREDICTED: uncharacterized protein LOC100249443 [Vitis vinifera]

 Score =  292 bits (748), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 144/195 (73%), Positives = 165/195 (84%), Gaps = 5/195 (2%)

Query: 1   MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGLSSNDAAKQAQKEGA 60
           M SGT+AC VKEGVKLYFYNIRA HVE+AR+ AIE A+ DAL+QGL++ DAAK AQKEGA
Sbjct: 50  MSSGTLACTVKEGVKLYFYNIRAVHVEKARHHAIEGALSDALTQGLNAKDAAKHAQKEGA 109

Query: 61  KAAKLAKRQAKRIIGPIIAAGWDFFEAIYYGGTITEGFIRGTGTLFGAYAGGFLGEERLG 120
           KAAKLA RQAKRIIGPII++GWDFFEAIYYGGT+TEGF+RGTGTLFGAY GGFLGE+RLG
Sbjct: 110 KAAKLATRQAKRIIGPIISSGWDFFEAIYYGGTLTEGFLRGTGTLFGAYTGGFLGEQRLG 169

Query: 121 RFGYLVGSHLGSWAGGRIGLMIYDVVNGVHFLLQFVQSEESEAHDAPVEEKFQDYEDSYA 180
           RFGYLVGSHLGSW GGRIGLMIYDV NGV FLLQ VQ EE+     P++   +  ED  +
Sbjct: 170 RFGYLVGSHLGSWVGGRIGLMIYDVANGVQFLLQSVQPEET-----PMDMSSEVPEDPGS 224

Query: 181 NEAPSFWNSEASEDS 195
            E+P++ +SEA EDS
Sbjct: 225 YESPAYESSEAQEDS 239

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125018|ref|XP_002319482.1| predicted protein [Populus trichocarpa] gi|222857858|gb|EEE95405.1| predicted protein [Populus trichocarpa]

 Score =  292 bits (747), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 134/178 (75%), Positives = 161/178 (90%)

Query: 1   MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGLSSNDAAKQAQKEGA 60
           MGSGT+AC VKEGVKLY YNIR+AHVERARN+AIE++++DA+ QG+S  DAAK AQKEG 
Sbjct: 50  MGSGTLACAVKEGVKLYVYNIRSAHVERARNLAIERSLLDAVGQGMSPQDAAKTAQKEGT 109

Query: 61  KAAKLAKRQAKRIIGPIIAAGWDFFEAIYYGGTITEGFIRGTGTLFGAYAGGFLGEERLG 120
           KAAKLAK+QAKRI+GP+I++GWDFFEA+YYGGTITEGF+RG+GTL GAYAGGFLG+ERLG
Sbjct: 110 KAAKLAKQQAKRIVGPVISSGWDFFEALYYGGTITEGFLRGSGTLVGAYAGGFLGDERLG 169

Query: 121 RFGYLVGSHLGSWAGGRIGLMIYDVVNGVHFLLQFVQSEESEAHDAPVEEKFQDYEDS 178
           R GYLVGSHLGSW GGRIGLM+YDVV+GVH+LLQFVQ E+SE +++P +E  + YE S
Sbjct: 170 RVGYLVGSHLGSWVGGRIGLMVYDVVDGVHYLLQFVQGEDSEVYESPPDESPESYEHS 227

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449454014|ref|XP_004144751.1| PREDICTED: uncharacterized protein LOC101204135 [Cucumis sativus] gi|449524962|ref|XP_004169490.1| PREDICTED: uncharacterized protein LOC101228818 [Cucumis sativus]

 Score =  290 bits (742), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 146/219 (66%), Positives = 175/219 (79%), Gaps = 5/219 (2%)

Query: 1   MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGLSSNDAAKQAQKEGA 60
           MGSG+VACGVKEGVKLYFYNIR+AHVE  R+ A+E A+ DA++QG+S+ +AAK AQKEG 
Sbjct: 54  MGSGSVACGVKEGVKLYFYNIRSAHVESVRHTALETALADAITQGMSAKEAAKHAQKEGV 113

Query: 61  KAAKLAKRQAKRIIGPIIAAGWDFFEAIYYGGTITEGFIRGTGTLFGAYAGGFLGEERLG 120
           KAAKLAKRQAKRIIGPII++GWDFFEA+YYGGTITEGF+RG+GTLFGAYAGGF+G++RLG
Sbjct: 114 KAAKLAKRQAKRIIGPIISSGWDFFEALYYGGTITEGFLRGSGTLFGAYAGGFIGDQRLG 173

Query: 121 RFGYLVGSHLGSWAGGRIGLMIYDVVNGVHFLLQFVQ---SEESEAHDAPVEEKFQDYED 177
           RFGYL+GSHLGSW GGRIGLM+YDVVNGVHFLL FVQ     E    +A   E     + 
Sbjct: 174 RFGYLIGSHLGSWVGGRIGLMVYDVVNGVHFLLNFVQGEEESEVHEKEAAYVENEASSDG 233

Query: 178 SYANEAPSFWNSEASEDSKASDSSLYENSESETYENSEL 216
           S+ N+AP + N E  E+S   +SS   + ES  +ENSE 
Sbjct: 234 SHVNDAPIYNNLEDIEESYHYESS--PSDESLDHENSEF 270

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	216
TAIR|locus:4515102688	270	AT1G56423 "AT1G56423" [Arabido	0.851	0.681	0.539	8e-53

TAIR|locus:4515102688 AT1G56423 "AT1G56423" [Arabidopsis thaliana (taxid:3702)]

 Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
 Identities = 102/189 (53%), Positives = 133/189 (70%)

Query:     1 MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGLSSNDXXXXXXXXXX 60
             M SGT+AC VKEGVKLYFYNIR+ HVE+ARNVAIEKA+ +AL  G+ + +          
Sbjct:    50 MSSGTLACAVKEGVKLYFYNIRSIHVEKARNVAIEKALHEALDNGMLAKEAAKEGQRAGE 109

Query:    61 XXXXXXXXXXXXIIGPIIAAGWDFFEAIYYGGTITEGFIRGTGTLFGAYAGGFLGEERLG 120
                         IIGPI+AAGWDFFEA+Y+GGT+TEGF+RGTGT+ GAY+GG++GE+R G
Sbjct:   110 KAAKLATRQAKRIIGPIVAAGWDFFEALYFGGTLTEGFLRGTGTMVGAYSGGYVGEQRFG 169

Query:   121 RFGYLVGSHLGSWAGGRIGLMIYDVVNGVHFLLQFVQS----EESEAHDAPVEEK-FQDY 175
             RFGYLVGS LG+W G R+GLM+YDVVNGV+F  +  QS    E+   +++P +   ++  
Sbjct:   170 RFGYLVGSTLGNWVGARVGLMVYDVVNGVNFFYETYQSGEIYEDQSTNESPEDRSTYESR 229

Query:   176 EDSYANEAP 184
             ED    E+P
Sbjct:   230 EDPSTYESP 238


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.140   0.428    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      216       166   0.00097  107 3  11 22  0.39    32
                                                     30  0.46    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  583 (62 KB)
  Total size of DFA:  150 KB (2091 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.02u 0.16s 14.18t   Elapsed:  00:00:00
  Total cpu time:  14.02u 0.16s 14.18t   Elapsed:  00:00:00
  Start:  Tue May 21 03:18:21 2013   End:  Tue May 21 03:18:21 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	216
TIGR01641	108	phageSPP1_gp7 phage putative head morphogenesis pr	85.55
cd01170	242	THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (T	80.96
PF04233	112	Phage_Mu_F: Phage Mu protein F like protein; Inter	80.89

>TIGR01641 phageSPP1_gp7 phage putative head morphogenesis protein, SPP1 gp7 family

Probab=85.55  E-value=1.3  Score=32.47  Aligned_cols=54  Identities=24%  Similarity=0.353  Sum_probs=38.7

Q ss_pred             HHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhc-chhhhhh
Q 027980           34 IEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAA-GWDFFEA   87 (216)
Q Consensus        34 ~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiiss-gWDfFEa   87 (216)
                      ++.+|.+++.+|.++++-||.-++........|.+-|+-=+.-+.+. -|+.++.
T Consensus         1 ~~~~l~~gi~~G~~~~~iak~i~~~~~~~~~~A~~iarTe~~~a~~~~~~~~~~~   55 (108)
T TIGR01641         1 VEDILADGVQRGLGPNELAKRLRKELGVQKHYAQRLARTETARIYNQTKLERYKK   55 (108)
T ss_pred             ChHHHHHHHHcCCCHHHHHHHHHHHHCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            47899999999999999999998887666555555555545544443 3565554

This model describes a region of about 110 amino acids found exclusively in phage-related proteins, internally or toward the C-terminus. One member, gp7 of phage SPP1, appears involved in head morphogenesis.

>cd01170 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz

Probab=80.96  E-value=3.3  Score=34.91  Aligned_cols=54  Identities=24%  Similarity=0.261  Sum_probs=42.4

Q ss_pred             HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhhhhhh
Q 027980           32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAIY   89 (216)
Q Consensus        32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfFEalY   89 (216)
                      ..+-.++.-.+.+|+++.+|++.|+.--.+|++.|.++..   ||= |---|+++.||
T Consensus       189 dtLa~aiAa~LA~g~~~~~A~~~A~~~~~~a~~~a~~~~~---~~~-~~~~~l~d~l~  242 (242)
T cd01170         189 CLLGAVIAAFLAVGDDPLEAAVSAVLVYGIAGELAAERAK---GPG-SFRVALLDELY  242 (242)
T ss_pred             HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhcCC---CCC-hHHHHHHHhhC
Confidence            3566788889999999999999999999999988865544   332 44568888887

A reaction that allows cells to recycle Thz into the thiamine biosynthesis pathway, as an alternative to its synthesis from cysteine, tyrosine and 1-deoxy-D-xylulose-5-phosphate.

>PF04233 Phage_Mu_F: Phage Mu protein F like protein; InterPro: IPR006528 This domain is found exclusively in phage-related proteins, internally or toward the C terminus

Probab=80.89  E-value=3.8  Score=29.45  Aligned_cols=54  Identities=26%  Similarity=0.407  Sum_probs=35.4

Q ss_pred             HHHHHHHHHHhcCCChHHHHHHHHHHHHH-HHHHHHHHhhhhhcchh-hcchhhhh
Q 027980           33 AIEKAVVDALSQGLSSNDAAKQAQKEGAK-AAKLAKRQAKRIIGPII-AAGWDFFE   86 (216)
Q Consensus        33 A~e~AL~da~~qGls~~eaAk~Aqk~g~k-AAKlA~rQAkRI~GPii-ssgWDfFE   86 (216)
                      .|+++|.+++.+|.++++-+|.-++.... ....|.+-|+-=+.-+. ++-|+.++
T Consensus         2 ~i~~~v~~~i~~G~~~~~~~~~l~~~~~~~~~~ra~~iarTe~~~a~~~a~~~~~~   57 (112)
T PF04233_consen    2 RIRQAVTQGIERGKSPQEIAKRLRDRGGVTSRYRAERIARTETARAYNAARWQQYQ   57 (112)
T ss_pred             hHHHHHHHHHHcCCCHHHHHHHHHHHhCcCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            47889999999999999999999988644 33344444443333332 23444433

Some of these proteins have been identified as being involved in phage head morphogenesis [, ].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	216
4aq4_A	419	SN-glycerol-3-phosphate-binding periplasmic prote;	84.52

>4aq4_A SN-glycerol-3-phosphate-binding periplasmic prote; diester-binding protein; HET: G3P; 1.80A {Escherichia coli}

Probab=84.52  E-value=2  Score=34.02  Aligned_cols=38  Identities=11%  Similarity=0.196  Sum_probs=31.6

Q ss_pred             HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHH
Q 027980           32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQ   69 (216)
Q Consensus        32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQ   69 (216)
                      .++..+|+..+...+++++|.+++|++..+.-|...+.
T Consensus       379 ~~~~~~~~~~~~g~~t~e~al~~~~~~~~~~L~~y~k~  416 (419)
T 4aq4_A          379 VIVDEELESVWTGKKTPQQALDTAVERGNQLLRRFEKS  416 (419)
T ss_dssp             HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            46788888999999999999999999988877665443

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00