Citrus Sinensis ID: 028074

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210----
Protein Sequence
MSKSICKDIEESSEENGDYYHLNDDNPDEPEINYIYVINAILSGTARLNVLLPTATILAFTILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFTFTDSFRTATGRLFYGVATFRGIWTFNGGRKKPCVPSDYRLRCADLFHASLSLIAFLTLAGSHRDVVACYFPAMPRKITNTVPPLVGFVISVLLVVFPSKRRGIGYPFLLQRDALYGRR
Secondary Structure (PSIPRED)
cccHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHccccccccEEcccccEEEEEEEccccEEEccccccccccccccccccHHHHHHHHHHHHHHHHHcccccEEEEcccccHHHHHHcccHHHHHHHEEEEEccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEcccccEEEcccccccccHHHHcEcHHHHHHHHHHHHHHHHHHHHccccHHccccccHHHHHHHccHEEEEEHHEEEEEccccccccccccccccccHHccc
Coil and Loop (DISEMBL)
msksickdieesseengdyyhlnddnpdepeinYIYVINAILSGTARLNVLLPTATILAFTIlaplltndgqcanLNRWLTGCFVVLLGASCVFFTFTDSFRTATGRLFYGVATFRgiwtfnggrkkpcvpsdyrlrCADLFHASLSLIAFLTLAgshrdvvacyfpamprkitntvpplVGFVISVLLVVfpskrrgigypfllqrdalygrr
Flexible Loop (DISEMBL)
MSKSICKDIEESSEENGDYYHLNDDNPDEPEINYIYVINAILSGTARLNVLLPTATILAFTILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFTFTDSFRTATGRLFYGVATFrgiwtfnggrkkpcVPSDYRLRCADLFHASLSLIAFLTLAGSHRDVVACYFPAMPRKITNTVPPLVGFVISVLLVVfpskrrgigypfllqrdalygrr
Low Complexity Region (SEG)
MSKSICKDIEESSEENGDYYHLNDDNPDEPEINYIYVINAILSGTARLNVLLPTATILAFTILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFTFTDSFRTATGRLFYGVATFRGIWTFNGGRKKPCVPSDYRLRCADLFHASLSLIAFLTLAGSHRDVVACYFPAMPRKITNTVPPLVGFVISVLLVVFPSKRRGIGYPFLLQRDALYGRR
Disordered region (IsUnstruct)
******************************EINYIYVINAILSGTARLNVLLPTATILAFTILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFTFTDSFRTATGRLFYGVATFRGIWTFNGGRKKPCVPSDYRLRCADLFHASLSLIAFLTLAGSHRDVVACYFPAMPRKITNTVPPLVGFVISVLLVVFPSKRRGIGYPFLLQRDALY***
Disordered Region (DISOPRED)
****************************************ILSGTARLNVLLPTATILAFTILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFTFTDSFRTATGRLFYGVATFRGIWTFNGGRK***VPSDYRLRCADLFHASLSLIAFLTLAGSHRDVVACYFPAMPRKITNTVPPLVGFVISVLLVVFPSKRRGIGYP************
Disordered Region (DISEMBL)
MSKSICKDIEESSEENGDYYHLNDDNPDEPEINYIYVINAILSGTARLNVLLPTATILAFTILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFTFTDSFRTATGRLFYGVATFRGIWTFNGGRKKPCVPSDYRLRCADLFHASLSLIAFLTLAGSHRDVVACYFPAMPRKITNTVPPLVGFVISVLLVVFPSKRRGIGYPFLLQRDALYGRR
Disordered Region (DISPRO)
******************************EINYIYVINAILSGTARLNVLLPTATILAFTILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFTFTDSFRTATGRLFYGVATFRGIWTFNGGRKKPCVPSDYRLRCADLFHASLSLIAFLTLAGSHRDVVACYFPAMPRKITNTVPPLVGFVISVLLVVFPSKRRGIGYPFLLQR*******
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSKSICKDIEESSEENGDYYHLNDDNPDEPEINYIYVINAILSGTARLNVLLPTATILAFTILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFTFTDSFRTATGRLFYGVATFRGIWTFNGGRKKPCVPSDYRLRCADLFHASLSLIAFLTLAGSHRDVVACYFPAMPRKITNTVPPLVGFVISVLLVVFPSKRRGIGYPFLLQRDALYGRR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
224135451	212	predicted protein [Populus trichocarpa]	0.985	0.995	0.755	1e-89
255585232	208	conserved hypothetical protein [Ricinus	0.962	0.990	0.735	7e-82
225460490	213	PREDICTED: uncharacterized protein LOC10	0.985	0.990	0.710	4e-80
357126205	218	PREDICTED: uncharacterized protein LOC10	0.962	0.944	0.600	3e-61
242055199	222	hypothetical protein SORBIDRAFT_03g04181	0.995	0.959	0.590	5e-61
413951724	227	hypothetical protein ZEAMMB73_531915 [Ze	0.850	0.801	0.647	2e-59
226509646	226	uncharacterized protein LOC100278173 [Ze	0.850	0.805	0.647	2e-59
125572873	592	hypothetical protein OsJ_04308 [Oryza sa	0.995	0.359	0.564	5e-59
297598061	227	Os01g0882400 [Oryza sativa Japonica Grou	0.995	0.938	0.564	2e-58
218189481	227	hypothetical protein OsI_04680 [Oryza sa	0.995	0.938	0.564	3e-58

>gi|224135451|ref|XP_002327221.1| predicted protein [Populus trichocarpa] gi|222835591|gb|EEE74026.1| predicted protein [Populus trichocarpa]

 Score =  334 bits (856), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 161/213 (75%), Positives = 180/213 (84%), Gaps = 2/213 (0%)

Query: 1   MSKSICKDIEESSEENGDYYHLNDDNPDEPEINYIYVINAILSGTARLNVLLPTATILAF 60
           M KSI +D+ E SE + DY +L DD PDE    Y+++INA+LSGTARLN+LLPTATILAF
Sbjct: 1   MDKSIWQDLAEDSEPSDDYCYLKDDEPDESR--YLHLINAVLSGTARLNILLPTATILAF 58

Query: 61  TILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFTFTDSFRTATGRLFYGVATFRGIWT 120
           TI APLLTNDG C  LNRWL G    LL ASCVFFTFTDSFRT+TGRL+YG+ATFRGIWT
Sbjct: 59  TIFAPLLTNDGICTTLNRWLMGALWALLAASCVFFTFTDSFRTSTGRLYYGLATFRGIWT 118

Query: 121 FNGGRKKPCVPSDYRLRCADLFHASLSLIAFLTLAGSHRDVVACYFPAMPRKITNTVPPL 180
           FNGGRKKPCVPSDYRLR ADLFHASLSLIAFL  AGSH DVV CY+PAMPRK+ NTVP +
Sbjct: 119 FNGGRKKPCVPSDYRLRWADLFHASLSLIAFLAFAGSHGDVVGCYYPAMPRKVINTVPLV 178

Query: 181 VGFVISVLLVVFPSKRRGIGYPFLLQRDALYGR 213
           +GFVIS+L V+FPSKRRGIGYPFLLQR+A Y R
Sbjct: 179 IGFVISILFVLFPSKRRGIGYPFLLQREAFYSR 211

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255585232|ref|XP_002533318.1| conserved hypothetical protein [Ricinus communis] gi|223526862|gb|EEF29075.1| conserved hypothetical protein [Ricinus communis]

 Score =  308 bits (790), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 153/208 (73%), Positives = 171/208 (82%), Gaps = 2/208 (0%)

Query: 1   MSKSICKDIEESSEENGDYYHLNDDNPDEPEINYIYVINAILSGTARLNVLLPTATILAF 60
           M  S  +D+ +S E + DYY+  DD PDE   +Y+Y+INAILSGTARLNVLLPTATILAF
Sbjct: 1   MDSSNRQDLIQSCEGSEDYYYPRDDYPDES--HYLYLINAILSGTARLNVLLPTATILAF 58

Query: 61  TILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFTFTDSFRTATGRLFYGVATFRGIWT 120
           TI APLLTNDG+C  LNRWL G F  LL ASC+FFTFTDSFRT+TGRL YG+ATFRGIWT
Sbjct: 59  TIFAPLLTNDGECGPLNRWLMGVFWGLLAASCIFFTFTDSFRTSTGRLSYGMATFRGIWT 118

Query: 121 FNGGRKKPCVPSDYRLRCADLFHASLSLIAFLTLAGSHRDVVACYFPAMPRKITNTVPPL 180
           FNGGRK+P VPSDYRLR ADLFHASLS+IAFL  AGSH DVV CY+P M RK+ N VP  
Sbjct: 119 FNGGRKRPSVPSDYRLRWADLFHASLSMIAFLAFAGSHSDVVKCYYPTMSRKVINIVPLA 178

Query: 181 VGFVISVLLVVFPSKRRGIGYPFLLQRD 208
           +GFVISVL V+FPSKRRGIGYPFLL RD
Sbjct: 179 IGFVISVLFVLFPSKRRGIGYPFLLLRD 206

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225460490|ref|XP_002270278.1| PREDICTED: uncharacterized protein LOC100247803 [Vitis vinifera] gi|296088687|emb|CBI38137.3| unnamed protein product [Vitis vinifera]

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 152/214 (71%), Positives = 172/214 (80%), Gaps = 3/214 (1%)

Query: 1   MSKSICKDIEESS-EENGDYYHLNDDNPDEPEINYIYVINAILSGTARLNVLLPTATILA 59
           M  S+ +D+ ES   +NG YY L DD  DE   ++IYV+NAILSGTARLNVLLPTATILA
Sbjct: 1   MDNSLQQDLIESYLPDNGSYYCLGDDGTDES--HFIYVLNAILSGTARLNVLLPTATILA 58

Query: 60  FTILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFTFTDSFRTATGRLFYGVATFRGIW 119
           FTI APLLTNDG+C  LNRWL G F+ +  ASC+FF FTDSFRTA GRL+YGVAT  GIW
Sbjct: 59  FTIFAPLLTNDGKCYTLNRWLMGFFLAISAASCIFFLFTDSFRTARGRLYYGVATRNGIW 118

Query: 120 TFNGGRKKPCVPSDYRLRCADLFHASLSLIAFLTLAGSHRDVVACYFPAMPRKITNTVPP 179
           TFNGGR+KPC PS+YRLR  DLFHA LSLIAFLT AGSH DV+ CY   M RK+TN+VP 
Sbjct: 119 TFNGGRRKPCAPSEYRLRWIDLFHALLSLIAFLTFAGSHNDVLECYHLEMSRKVTNSVPL 178

Query: 180 LVGFVISVLLVVFPSKRRGIGYPFLLQRDALYGR 213
           +VGFVIS+L VVFPS RRGIGYPFLLQ+DALY R
Sbjct: 179 VVGFVISLLFVVFPSNRRGIGYPFLLQKDALYTR 212

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357126205|ref|XP_003564779.1| PREDICTED: uncharacterized protein LOC100822936 [Brachypodium distachyon]

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 125/208 (60%), Positives = 156/208 (75%), Gaps = 2/208 (0%)

Query: 9   IEESSEENGDYYHLNDDNPDEPEINYIYVINAILSGTARLNVLLPTATILAFTILAPLLT 68
           IE++S++     H  DD+ D+   ++I + N +LSGTARLNVLLPTATIL F I  PL+T
Sbjct: 11  IEQASKDADGDPHQEDDDSDDDTSSFILLANLVLSGTARLNVLLPTATILTFAIFVPLVT 70

Query: 69  NDGQCANLNRWLTGCFVVLLGASCVFFTFTDSFRTATGRLFYGVATFRGIWTFNGG--RK 126
           +DG+C  +NR LT  FV+L  ASCVFFT TDSFR+ATGRL YG+AT  GI TF GG  RK
Sbjct: 71  DDGKCTRVNRILTAAFVLLCAASCVFFTLTDSFRSATGRLRYGIATPTGIRTFCGGHRRK 130

Query: 127 KPCVPSDYRLRCADLFHASLSLIAFLTLAGSHRDVVACYFPAMPRKITNTVPPLVGFVIS 186
            P  P  YRLR +DLFH +LSL+AF T A SH D+V CY+P +PRK+ NTVP +VGFV+S
Sbjct: 131 APREPEKYRLRWSDLFHTALSLVAFATFAASHHDMVRCYYPGVPRKVVNTVPLVVGFVVS 190

Query: 187 VLLVVFPSKRRGIGYPFLLQRDALYGRR 214
           +L V+FPS+RRGIGYPFLL+ D +Y RR
Sbjct: 191 LLFVMFPSRRRGIGYPFLLRTDLVYLRR 218

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242055199|ref|XP_002456745.1| hypothetical protein SORBIDRAFT_03g041810 [Sorghum bicolor] gi|241928720|gb|EES01865.1| hypothetical protein SORBIDRAFT_03g041810 [Sorghum bicolor]

 Score =  239 bits (610), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 130/220 (59%), Positives = 160/220 (72%), Gaps = 7/220 (3%)

Query: 2   SKSICKD-IEESSEENGD--YYHLNDDNPDEPEINYIYVINAILSGTARLNVLLPTATIL 58
            K  CK  I+++S E  D   +   DD  D+   ++I V+N +L GTARLNVLLPTATIL
Sbjct: 3   EKEECKVLIDQASNEVADPPRHEDEDDEDDDDSWSFIMVLNLVLGGTARLNVLLPTATIL 62

Query: 59  AFTILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFTFTDSFRTATGRLFYGVATFRGI 118
           AF I APLLT+DG+C  LNR LT  FVVL   SCVFFT TDSFR+A+GRL YGVAT  GI
Sbjct: 63  AFAIFAPLLTDDGKCTRLNRILTAAFVVLCAGSCVFFTLTDSFRSASGRLRYGVATPTGI 122

Query: 119 WTFNGG----RKKPCVPSDYRLRCADLFHASLSLIAFLTLAGSHRDVVACYFPAMPRKIT 174
            TF GG    RK P  P  YRLR +DLFH +L+L+AF+T A SH D+V CY+P +PRK+ 
Sbjct: 123 RTFCGGGHRRRKGPREPERYRLRWSDLFHTTLALVAFVTFAASHHDMVLCYYPGVPRKVV 182

Query: 175 NTVPPLVGFVISVLLVVFPSKRRGIGYPFLLQRDALYGRR 214
           NTVP ++GFV+S+L V+FPS+RRGIGYPFLL+ D +Y RR
Sbjct: 183 NTVPLVIGFVVSLLFVLFPSRRRGIGYPFLLRTDLVYLRR 222

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413951724|gb|AFW84373.1| hypothetical protein ZEAMMB73_531915 [Zea mays]

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 121/187 (64%), Positives = 147/187 (78%), Gaps = 5/187 (2%)

Query: 33  NYIYVINAILSGTARLNVLLPTATILAFTILAPLLTNDGQCAN-LNRWLTGCFVVLLGAS 91
           ++I V+N +L GTARLNVLLPTATILAF I APLLT+DG+C+  LNR LT  FV L  AS
Sbjct: 41  SFIVVLNLVLGGTARLNVLLPTATILAFAIFAPLLTDDGKCSTRLNRILTAAFVALCAAS 100

Query: 92  CVFFTFTDSFRTATGRLFYGVATFRGIWTFNGG----RKKPCVPSDYRLRCADLFHASLS 147
           CVFFT TDSFR+A+GRL YGVAT  GI TF GG    RK P  P  YRLR +DLFH++L+
Sbjct: 101 CVFFTLTDSFRSASGRLRYGVATPAGIRTFCGGHRRRRKGPREPELYRLRWSDLFHSALA 160

Query: 148 LIAFLTLAGSHRDVVACYFPAMPRKITNTVPPLVGFVISVLLVVFPSKRRGIGYPFLLQR 207
           L+AF+T A SH D+V CY+P +PRK+ NTVP +VGFV+S+L V+FPS+RRGIGYPFLL+ 
Sbjct: 161 LVAFVTFAASHHDMVLCYYPGVPRKVVNTVPLVVGFVVSLLFVLFPSRRRGIGYPFLLRT 220

Query: 208 DALYGRR 214
           D +Y RR
Sbjct: 221 DLVYLRR 227

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226509646|ref|NP_001145007.1| uncharacterized protein LOC100278173 [Zea mays] gi|195649891|gb|ACG44413.1| hypothetical protein [Zea mays]

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 121/187 (64%), Positives = 147/187 (78%), Gaps = 5/187 (2%)

Query: 33  NYIYVINAILSGTARLNVLLPTATILAFTILAPLLTNDGQCAN-LNRWLTGCFVVLLGAS 91
           ++I V+N +L GTARLNVLLPTATILAF I APLLT+DG+C+  LNR LT  FV L  AS
Sbjct: 40  SFIVVLNLVLGGTARLNVLLPTATILAFAIFAPLLTDDGKCSTRLNRILTAAFVALCAAS 99

Query: 92  CVFFTFTDSFRTATGRLFYGVATFRGIWTFNGG----RKKPCVPSDYRLRCADLFHASLS 147
           CVFFT TDSFR+A+GRL YGVAT  GI TF GG    RK P  P  YRLR +DLFH++L+
Sbjct: 100 CVFFTLTDSFRSASGRLRYGVATPAGIRTFCGGHRRRRKGPREPELYRLRWSDLFHSALA 159

Query: 148 LIAFLTLAGSHRDVVACYFPAMPRKITNTVPPLVGFVISVLLVVFPSKRRGIGYPFLLQR 207
           L+AF+T A SH D+V CY+P +PRK+ NTVP +VGFV+S+L V+FPS+RRGIGYPFLL+ 
Sbjct: 160 LVAFVTFAASHHDMVLCYYPGVPRKVVNTVPLVVGFVVSLLFVLFPSRRRGIGYPFLLRT 219

Query: 208 DALYGRR 214
           D +Y RR
Sbjct: 220 DLVYLRR 226

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125572873|gb|EAZ14388.1| hypothetical protein OsJ_04308 [Oryza sativa Japonica Group]

 Score =  233 bits (593), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 127/225 (56%), Positives = 159/225 (70%), Gaps = 12/225 (5%)

Query: 2   SKSICKD-IEESSEENGDYYHLNDDNPDEPEIN--YIYVINAILSGTARLNVLLPTATIL 58
            K  CK  I+++S E GD +  +D   ++ + +   I + N ILSGTARLNVLLPTATIL
Sbjct: 368 EKEECKVLIDQASNEAGDPHQDDDCEDEDDDDSSSLILLTNLILSGTARLNVLLPTATIL 427

Query: 59  AFTILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFTFTDSFRTATGRLFYGVATFRGI 118
           AF I APLLT+DG+C  LNR LTG  ++L  ASCVFFT TDSFR+ TGRL YG+AT  GI
Sbjct: 428 AFAIFAPLLTDDGKCTRLNRALTGALMLLCAASCVFFTLTDSFRSPTGRLRYGIATTSGI 487

Query: 119 WTF---------NGGRKKPCVPSDYRLRCADLFHASLSLIAFLTLAGSHRDVVACYFPAM 169
            TF          GG+  P  P  YRLR +DLFH +L+L+AF+T A SH D+V CY+P +
Sbjct: 488 RTFCVGGRRRRRGGGKAGPREPERYRLRWSDLFHTALALVAFVTFAASHHDIVLCYYPGV 547

Query: 170 PRKITNTVPPLVGFVISVLLVVFPSKRRGIGYPFLLQRDALYGRR 214
           PRK+ NTVP ++GFV+S+L V+FPSKRRGIGYPFLL  D +Y RR
Sbjct: 548 PRKVVNTVPLVIGFVVSLLFVLFPSKRRGIGYPFLLSTDLVYLRR 592

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297598061|ref|NP_001045008.2| Os01g0882400 [Oryza sativa Japonica Group] gi|56784478|dbj|BAD82571.1| unknown protein [Oryza sativa Japonica Group] gi|255673930|dbj|BAF06922.2| Os01g0882400 [Oryza sativa Japonica Group]

 Score =  231 bits (589), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 127/225 (56%), Positives = 159/225 (70%), Gaps = 12/225 (5%)

Query: 2   SKSICKD-IEESSEENGDYYHLNDDNPDEPEIN--YIYVINAILSGTARLNVLLPTATIL 58
            K  CK  I+++S E GD +  +D   ++ + +   I + N ILSGTARLNVLLPTATIL
Sbjct: 3   EKEECKVLIDQASNEAGDPHQDDDCEDEDDDDSSSLILLTNLILSGTARLNVLLPTATIL 62

Query: 59  AFTILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFTFTDSFRTATGRLFYGVATFRGI 118
           AF I APLLT+DG+C  LNR LTG  ++L  ASCVFFT TDSFR+ TGRL YG+AT  GI
Sbjct: 63  AFAIFAPLLTDDGKCTRLNRALTGALMLLCAASCVFFTLTDSFRSPTGRLRYGIATTSGI 122

Query: 119 WTF---------NGGRKKPCVPSDYRLRCADLFHASLSLIAFLTLAGSHRDVVACYFPAM 169
            TF          GG+  P  P  YRLR +DLFH +L+L+AF+T A SH D+V CY+P +
Sbjct: 123 RTFCVGGRRRRRGGGKAGPREPERYRLRWSDLFHTALALVAFVTFAASHHDIVLCYYPGV 182

Query: 170 PRKITNTVPPLVGFVISVLLVVFPSKRRGIGYPFLLQRDALYGRR 214
           PRK+ NTVP ++GFV+S+L V+FPSKRRGIGYPFLL  D +Y RR
Sbjct: 183 PRKVVNTVPLVIGFVVSLLFVLFPSKRRGIGYPFLLSTDLVYLRR 227

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218189481|gb|EEC71908.1| hypothetical protein OsI_04680 [Oryza sativa Indica Group]

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 127/225 (56%), Positives = 159/225 (70%), Gaps = 12/225 (5%)

Query: 2   SKSICKD-IEESSEENGDYYHLNDDNPDEPEIN--YIYVINAILSGTARLNVLLPTATIL 58
            K  CK  I+++S E GD +  +D   ++ + +   I + N ILSGTARLNVLLPTATIL
Sbjct: 3   EKEECKVLIDQASNEAGDPHQDDDCEDEDDDDSSSLILLTNLILSGTARLNVLLPTATIL 62

Query: 59  AFTILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFTFTDSFRTATGRLFYGVATFRGI 118
           AF I APLLT+DG+C  LNR LTG  ++L  ASCVFFT TDSFR+ TGRL YG+AT  GI
Sbjct: 63  AFAIFAPLLTDDGKCTRLNRALTGALMLLCAASCVFFTLTDSFRSPTGRLRYGIATPSGI 122

Query: 119 WTF---------NGGRKKPCVPSDYRLRCADLFHASLSLIAFLTLAGSHRDVVACYFPAM 169
            TF          GG+  P  P  YRLR +DLFH +L+L+AF+T A SH D+V CY+P +
Sbjct: 123 CTFCVGGRRRRRGGGKAGPREPERYRLRWSDLFHTALALVAFVTFAASHHDIVLCYYPGV 182

Query: 170 PRKITNTVPPLVGFVISVLLVVFPSKRRGIGYPFLLQRDALYGRR 214
           PRK+ NTVP ++GFV+S+L V+FPSKRRGIGYPFLL  D +Y RR
Sbjct: 183 PRKVVNTVPLVIGFVVSLLFVLFPSKRRGIGYPFLLSTDLVYLRR 227

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
TAIR|locus:2135952	213	AT4G24310 "AT4G24310" [Arabido	0.771	0.774	0.393	6.4e-28
TAIR|locus:2089865	184	DMP2 "AT3G21550" [Arabidopsis	0.728	0.847	0.411	3.5e-27
TAIR|locus:505006493	213	AT4G18425 "AT4G18425" [Arabido	0.831	0.835	0.371	3.5e-27
TAIR|locus:2161393	214	AT5G46090 "AT5G46090" [Arabido	0.906	0.906	0.351	7.3e-27
TAIR|locus:2076894	219	AT3G02430 "AT3G02430" [Arabido	0.742	0.726	0.377	1.5e-26
TAIR|locus:2089915	207	DMP1 "AT3G21520" [Arabidopsis	0.752	0.777	0.373	6.6e-26
TAIR|locus:1009023066	243	AT1G09157 "AT1G09157" [Arabido	0.761	0.670	0.335	1.4e-23
TAIR|locus:2164850	244	DAU2 "AT5G39650" [Arabidopsis	0.761	0.668	0.335	1e-22
TAIR|locus:2146380	191	AT5G27370 "AT5G27370" [Arabido	0.546	0.612	0.367	1.1e-14
TAIR|locus:504955516	165	DMP7 "AT4G28485" [Arabidopsis	0.457	0.593	0.288	4.7e-09

TAIR|locus:2135952 AT4G24310 "AT4G24310" [Arabidopsis thaliana (taxid:3702)]

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 68/173 (39%), Positives = 103/173 (59%)

Query:    37 VINAILSGTARLNVLLPTATILAFTILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFT 96
             V++  L+  A L  LLPT T+LAFT+L P+ T++G C    + LT   + LL  SC   +
Sbjct:    34 VMSQTLTSAANLANLLPTGTLLAFTLLIPVFTSNGSCDYPTQVLTIVLLTLLSISCFLSS 93

Query:    97 FTDSFRTATGRLFYGVATFRGIWTFN----GGRKKPCVPSDYRLRCADLFHASLSLIAFL 152
             FTDS +   G ++YG AT +G+W F+     G   P + S YR+R  D  HA LS++ F 
Sbjct:    94 FTDSVKAEDGNVYYGFATRKGMWVFDYPDPDGLGLPNL-SKYRIRIIDWIHAVLSVLVFG 152

Query:   153 TLAGSHRDVVACYFPAMP---RKITNTVPPLVGFVISVLLVVFPSKRRGIGYP 202
              +A   ++ V+C++PA     +K+ + VP  VG +  +L +VFP++R GIGYP
Sbjct:   153 AVALRDKNAVSCFYPAPEQETKKVLDIVPMGVGVICGMLFLVFPARRHGIGYP 205

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2089865 DMP2 "AT3G21550" [Arabidopsis thaliana (taxid:3702)]

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 67/163 (41%), Positives = 90/163 (55%)

Query:    43 SGTARLNVLLPTATILAFTILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFTFTDSFR 102
             SG   L  LLPT T+  F  L P+LTN+G C  +N++LTG  +V+   SC F  FTDS+R
Sbjct:    14 SGVGDLIKLLPTGTVFLFQFLNPVLTNNGHCLLINKYLTGVLIVICAFSCCFTCFTDSYR 73

Query:   103 TATGRLFYGVATFRGIWTFNGGRKKPCVPSDYRLRCADLFHASLSLIAFLTLAGSHRDVV 162
             T  G + YGVAT +G+W  +         S  RLR  D  HA  SLI F  ++    + V
Sbjct:    74 TRDGYVHYGVATVKGLWPDSSSVDL----SSKRLRVGDFVHAFFSLIVFSVISLLDANTV 129

Query:   163 ACYFPAMPR--KITNTV-PPLVGFVISVLLVVFPSKRRGIGYP 202
              C++P      KI   V PP++G +   +  VFPS+R GIG P
Sbjct:   130 NCFYPGFGSAGKIFLMVLPPVIGVISGAVFTVFPSRRHGIGNP 172

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

TAIR|locus:505006493 AT4G18425 "AT4G18425" [Arabidopsis thaliana (taxid:3702)]

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 68/183 (37%), Positives = 96/183 (52%)

Query:    25 DNPDEPEINYIY-VINAILSGTARLNVLLPTATILAFTILAPLLTNDGQCANLNRWLTGC 83
             D PD     +I   I      TA L  LLPT T+LAF +L+P+ +N GQC  +++ +T  
Sbjct:    27 DFPDIERTTWIQKAIGQTFQTTAHLANLLPTGTVLAFQLLSPIFSNGGQCDLVSKIMTST 86

Query:    84 FVVLLGASCVFFTFTDSFRTATGRLFYGVATFRGIWTFNGGRKKPCVPSD-YRLRCADLF 142
              V + G SC   +FTDS++   G + YG+AT  G W  +G    P   S  Y+LR  D  
Sbjct:    87 LVAICGFSCFILSFTDSYKDKNGTICYGLATIHGFWIIDGSTTLPQELSKRYKLRFIDFV 146

Query:   143 HASLSLIAFLTLAGSHRDVVACYFP---AMPRKITNTVPPLVGFVISVLLVVFPSKRRGI 199
             HA +SL  F  +    R+ V C+FP   A   ++   +P  VG   S+L   FP+ R GI
Sbjct:   147 HAFMSLFVFGAVVLFDRNAVNCFFPSPSAEALEVLTALPVGVGVFSSMLFATFPTTRNGI 206

Query:   200 GYP 202
             G+P
Sbjct:   207 GFP 209

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009705 "plant-type vacuole membrane" evidence=IDA

TAIR|locus:2161393 AT5G46090 "AT5G46090" [Arabidopsis thaliana (taxid:3702)]

 Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 70/199 (35%), Positives = 102/199 (51%)

Query:     9 IEESSEENGDYYHLNDDNPD-EPEINYIYVINAILSGTARLNVLLPTATILAFTILAPLL 67
             I+E +    D  + N D PD E        I      TA L  LLPT T+LAF IL+P+ 
Sbjct:    12 IKEETVPLLDDQNRNRDLPDIERNTMMQKAIGKTFQTTANLANLLPTGTVLAFQILSPIC 71

Query:    68 TNDGQCANLNRWLTGCFVVLLGASCVFFTFTDSFRTATGRLFYGVATFRGIWTFNGGRKK 127
             TN G+C   +R++T   V + G SC   +FTDS++   G + YG AT  G W  +G    
Sbjct:    72 TNVGRCDLTSRFMTALLVSICGFSCFILSFTDSYKDLNGSVCYGFATIHGFWIIDGSATL 131

Query:   128 PC-VPSDYRLRCADLFHASLSLIAFLTLAGSHRDVVACYFPAMPRKITN---TVPPLVGF 183
             P  +   Y+LR  D  HA +S + F  +    ++VV C++P    ++     T+P  VG 
Sbjct:   132 PQELSKSYKLRFIDFVHAIMSFLVFGAVVLFDQNVVNCFYPEPSAEVVELLTTLPVAVGV 191

Query:   184 VISVLLVVFPSKRRGIGYP 202
               S++   FP+ R GIG+P
Sbjct:   192 FCSMVFAKFPTTRHGIGFP 210

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

TAIR|locus:2076894 AT3G02430 "AT3G02430" [Arabidopsis thaliana (taxid:3702)]

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 63/167 (37%), Positives = 100/167 (59%)

Query:    42 LSGTARLNVLLPTATILAFTILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFTFTDSF 101
             L+  A L+ LLPT T+LAF +L P+ T++G C +  R+LT   + LL ASC   +FTDS 
Sbjct:    45 LTSAANLSNLLPTGTLLAFQLLTPVFTSNGVCDHATRFLTAVLLFLLAASCFVSSFTDSV 104

Query:   102 RTATGRLFYGVATFRGIWTFN----GGRKKPCVPSDYRLRCADLFHASLSLIAFLTLAGS 157
             +   G +++G  TF+G+W  +     G   P + + YR+R  D  HA+LS++ F  +A  
Sbjct:   105 KADDGTIYFGFVTFKGMWVVDYPDPSGLGLPDL-AKYRMRFVDWIHATLSVLVFGAVALR 163

Query:   158 HRDVVACYFP---AMPRKITNTVPPLVGFVISVLLVVFPSKRRGIGY 201
              + +  C++P   A  + + + VP  VG + S+L +VFP++R GIGY
Sbjct:   164 DKYITDCFYPSPEAETKHVLDIVPVGVGVMCSLLFMVFPARRHGIGY 210

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2089915 DMP1 "AT3G21520" [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 62/166 (37%), Positives = 89/166 (53%)

Query:    39 NAILSGTARLNVLLPTATILAFTILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFTFT 98
             N  L+G   L  LLPT T+  + +L P+LTNDG+C+  N+ ++   V L   SCVF  FT
Sbjct:    24 NKSLTGLESLIKLLPTGTLFIYLLLNPVLTNDGECSTGNKVMSSILVALCSFSCVFSCFT 83

Query:    99 DSFRTATGRLFYGVATFRGIWTFNGGRKKPCVPSDYRLRCADLFHASLSLIAFLTLAGSH 158
             DSF+   G   +G+ T +G+WT+          S Y+LR AD  HA   L  F TL    
Sbjct:    84 DSFKGVDGSRKFGIVTKKGLWTY--AEPGSVDLSKYKLRIADFVHAGFVLAVFGTLVLLD 141

Query:   159 RDVVACYFPAM---PRKITNTVPPLVGFVISVLLVVFPSKRRGIGY 201
              +  +C++P      + +   +PP VG   + +  +FPSKR GIGY
Sbjct:   142 ANTASCFYPRFRETQKTLVMALPPAVGVASATIFALFPSKRSGIGY 187

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0010256 "endomembrane system organization" evidence=IMP

TAIR|locus:1009023066 AT1G09157 "AT1G09157" [Arabidopsis thaliana (taxid:3702)]

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 60/179 (33%), Positives = 94/179 (52%)

Query:    38 INAILSGTARLNVLLPTATILAFTILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFTF 97
             +   +S T+ L   LPT T+L F ++ P +  DG C  +N  +    ++L   SC FF F
Sbjct:    61 VQKTVSKTSMLVNFLPTGTLLMFEMVLPTIYRDGDCNGINTLMIHLLLLLCAMSCFFFHF 120

Query:    98 TDSFRTATGRLFYGVATFRGIWTF--------NGG-----RKKPCVPSDYRLRCADLFHA 144
             TDSF+ + G+++YG  T RG+  F         GG     ++ P     Y+LR  D  H+
Sbjct:   121 TDSFKASDGKIYYGFVTPRGLAVFMKPPSPGFGGGDVIAEKEIPVTDERYKLRVNDFVHS 180

Query:   145 SLSLIAFLTLAGSHRDVVACYFPAMPRK---ITNTVPPLVGFVISVLLVVFPSKRRGIG 200
              +S++ F+ +A S R V  C FP   ++   +  + P +VG V S L +VFP+ R G+G
Sbjct:   181 VMSVLVFMAIAFSDRRVTGCLFPGKEKEMDQVMESFPLMVGIVCSALFLVFPTSRYGVG 239

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

TAIR|locus:2164850 DAU2 "AT5G39650" [Arabidopsis thaliana (taxid:3702)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 60/179 (33%), Positives = 92/179 (51%)

Query:    38 INAILSGTARLNVLLPTATILAFTILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFTF 97
             +   +S T+ L   LPT T+L F ++ P +  DG C  +N  +    ++L   SC FF F
Sbjct:    62 VQKTVSKTSMLVNFLPTGTLLMFEMVLPSIYRDGDCNGINTLMIHLLLLLCAMSCFFFHF 121

Query:    98 TDSFRTATGRLFYGVATFRGIWTF--------NGG-----RKKPCVPSDYRLRCADLFHA 144
             TDSF+ + G+++YG  T RG+  F         GG      + P     Y+L   D  HA
Sbjct:   122 TDSFKASDGKIYYGFVTPRGLAVFMKPPPPEFGGGDVIAEAEIPVTDDRYKLTVNDFVHA 181

Query:   145 SLSLIAFLTLAGSHRDVVACYFPAMPRK---ITNTVPPLVGFVISVLLVVFPSKRRGIG 200
              +S++ F+ +A S R V  C FP   ++   +  + P +VG V S L +VFP+ R G+G
Sbjct:   182 VMSVLVFMAIAFSDRRVTGCLFPGKEKEMDQVMESFPIMVGIVCSALFLVFPTTRYGVG 240

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0048235 "pollen sperm cell differentiation" evidence=IEP

TAIR|locus:2146380 AT5G27370 "AT5G27370" [Arabidopsis thaliana (taxid:3702)]

 Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 47/128 (36%), Positives = 65/128 (50%)

Query:    51 LLPTATILAFTILAPLLTNDGQCAN--LNRWLTGCFVVLLGASCVFFTFTDSFRTATGRL 108
             LLPT T L F  L P  +N G+C N  +N+ LT   +    A+C F +FTDS+    GR+
Sbjct:    18 LLPTGTALIFETLLPSFSNGGECNNKPVNKLLTITLISFCAAACFFSSFTDSYVGQDGRI 77

Query:   109 FYGVATFRGIWTFN-----GGRKKPCVPSD----YRLRCADLFHASLSLIAFLTLAGSHR 159
             +YG+AT  G+   N     G   +  + +D    Y+L   D  HA +S+I FL LA    
Sbjct:    78 YYGIATSNGLHILNDYPDEGYDPESGLTADKRERYKLSFVDFVHAFVSVIVFLALAVESS 137

Query:   160 DVVACYFP 167
             D   C  P
Sbjct:   138 DFRRCLLP 145

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:504955516 DMP7 "AT4G28485" [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 30/104 (28%), Positives = 54/104 (51%)

Query:   103 TATGRLFYGVATFRGIWTFNGGRKKPCVPSD-YRLRCADLFHASLSLIAFLTLAGSHRDV 161
             T T R  YG+AT+ G+   +G         + Y+L+  D  HA +S++ F  ++   ++V
Sbjct:    60 TQTAR--YGLATWSGLLVMDGSITLTEEEKEKYKLKILDFIHAIMSMLVFFAVSMFDQNV 117

Query:   162 VACYFPAMP---RKITNTVPPLVGFVISVLLVVFPSKRRGIGYP 202
               C FP      ++I  ++P ++G +     + FP++R GIG P
Sbjct:   118 TRCLFPVPSEETKEILTSLPFVIGVICGAFFLAFPTRRHGIGSP 161


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.327   0.143   0.448    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      214       214   0.00085  112 3  11 22  0.43    32
                                                     31  0.49    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  597 (63 KB)
  Total size of DFA:  179 KB (2104 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.21u 0.17s 18.38t   Elapsed:  00:00:01
  Total cpu time:  18.21u 0.17s 18.38t   Elapsed:  00:00:01
  Start:  Fri May 10 01:25:36 2013   End:  Fri May 10 01:25:37 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	214
pfam05078	169	pfam05078, DUF679, Protein of unknown function (DU	3e-67

>gnl|CDD|147322 pfam05078, DUF679, Protein of unknown function (DUF679)

 Score =  203 bits (519), Expect = 3e-67
 Identities = 77/169 (45%), Positives = 100/169 (59%), Gaps = 9/169 (5%)

Query: 42  LSGTARLNVLLPTATILAFTILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFTFTDSF 101
           LS TA L  LLPT T+LAF  L+P  TN G+C   NR LT   V L  ASC FF+FTDS+
Sbjct: 1   LSSTANLAKLLPTGTVLAFQALSPSFTNHGECDAANRVLTAALVALCAASCFFFSFTDSY 60

Query: 102 RTATGRLFYGVATFRGIWTFN------GGRKKPCVPSDYRLRCADLFHASLSLIAFLTLA 155
               G+++YGVAT RG+W FN      GG       S YRLR  D  HA  S++ FL +A
Sbjct: 61  VGPDGKVYYGVATPRGLWVFNYEGGRGGGDLPQRDLSRYRLRFLDFVHAFFSVLVFLAVA 120

Query: 156 GSHRDVVACYFPAMP---RKITNTVPPLVGFVISVLLVVFPSKRRGIGY 201
            S  +VV+C++P      +++   +P  VG V S + +VFP+ R GIGY
Sbjct: 121 LSDANVVSCFYPGPGEETKEVLTNLPLGVGVVSSFVFMVFPTTRHGIGY 169

This family contains several uncharacterized plant proteins. Length = 169

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	214
PF05078	170	DUF679: Protein of unknown function (DUF679); Inte	100.0

>PF05078 DUF679: Protein of unknown function (DUF679); InterPro: IPR007770 This family contains uncharacterised plant proteins of unknown function

Probab=100.00  E-value=3.2e-84  Score=543.88  Aligned_cols=160  Identities=51%  Similarity=0.949  Sum_probs=155.4

Q ss_pred             HHHHHhhhhhCchhHHHHHHHhhcccccCCcccchhHHHHHHHHHHhhhhhceeeccceeecCCCcEEEEEEeccceeee
Q 028074           42 LSGTARLNVLLPTATILAFTILAPLLTNDGQCANLNRWLTGCFVVLLGASCVFFTFTDSFRTATGRLFYGVATFRGIWTF  121 (214)
Q Consensus        42 lssta~LakLLPTGTvLaFQ~LsP~~TN~G~C~~~nr~Lt~~Ll~lca~sCff~sFTDS~~~~dGkvyYG~aT~~Gl~~f  121 (214)
                      |+++|||+|||||||||+||+|+|++||||+|+++|||||++||++||+||||+||||||+|+|||+|||+||+||||+|
T Consensus         1 ls~ta~La~LLPTGTvlaFq~L~P~~Tn~G~C~~~nr~lt~~Ll~lca~sC~f~sFTDS~~~~dGkvyYG~aT~~Gl~~f   80 (170)
T PF05078_consen    1 LSSTANLAKLLPTGTVLAFQILSPSFTNNGECDTANRWLTAALLALCAASCFFFSFTDSFRGSDGKVYYGFATPRGLWVF   80 (170)
T ss_pred             CccHHHHHHhCcchHHHHHHHhhhhcccCCccCcchHHHHHHHHHHHHHHHHHeeecceeECCCCCEEEEEEEcccceec
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             c------CC-CCCCCCCCCcccccchhhhhHHHHHHHHHHHhccCCcceeeCCCcc---hhhhhhcCchhHhhhheeeee
Q 028074          122 N------GG-RKKPCVPSDYRLRCADLFHASLSLIAFLTLAGSHRDVVACYFPAMP---RKITNTVPPLVGFVISVLLVV  191 (214)
Q Consensus       122 ~------~~-~~~~~~~s~yrLr~~DfVHA~lS~~VF~avAl~D~nvv~CffP~~~---~evl~~lPl~vG~~~S~vF~i  191 (214)
                      |      |+ +.++++++||||||+|||||+||++||++||++|+|||+||||.++   ||+++++|++||++||+|||+
T Consensus        81 ~~~~~~~g~~~~~~~~~~~yrlr~~DfvHA~lS~~VF~aval~d~~v~~Cf~P~~~~~~~~~l~~lP~~vG~~~S~vF~~  160 (170)
T PF05078_consen   81 NYPGPEEGGGELKPRDLSKYRLRFIDFVHAFLSVVVFLAVALSDQNVVSCFFPSPSSETKEVLMNLPLGVGVLCSMVFMI  160 (170)
T ss_pred             CCCCccccccCCCccccccceEehhhhhHHHHHHHHHHHhheeCCCcceecCCCCchhHHHHHHHhHHHHHHhHeeEEEE
Confidence            9      33 3467899999999999999999999999999999999999999998   999999999999999999999


Q ss_pred             cCCCCcccCC
Q 028074          192 FPSKRRGIGY  201 (214)
Q Consensus       192 FPt~RhGIGy  201 (214)
                      |||+||||||
T Consensus       161 FPt~R~GIGy  170 (170)
T PF05078_consen  161 FPTTRHGIGY  170 (170)
T ss_pred             CCCCCCCCCC
Confidence            9999999998

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00