Citrus Sinensis ID: 028075

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210----
Protein Sequence
MGASESTLSSPQSQRPIDDITTVSYKSESVDPILENIKSLKITTPILTSPPPTESSLTDILVRRSSTSSASGTVNPKVLLELFSMYRDWQEEKAKQISKRQEEIENKIEVADALATKLLQRFGYSVSAMKTSSQHLSEVHALQVEIGELKGRLTEVISNCDALCKRIAAEGPDSLKASIKPLAVTTTRSEVSCSSSSLQKDDKLESSSTEGKLD
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEEccccccccHHHHHHHccccccccccccccccccccHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHcccccccccccEEEEEccccccccHHHHHHHccccccccccccccccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccEEEHHHHHHHHHHHHHHHHHHHHHHHHcccHHcccccccccEEccccEEccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mgasestlsspqsqrpiddittvsyksesvdpiLENIKslkittpiltsppptessltDILVRrsstssasgtvnPKVLLELFSMYRDWQEEKAKQISKRQEEIENKIEVADALATKLLQRFGYSVSAMKTSSQHLSEVHALQVEIGELKGRLTEVISNCDALCKRIAaegpdslkasikplavtttrsevscsssslqkddklessstegkld
Flexible Loop (DISEMBL)
mgasestlsspqsqrpiddittvsyksesvdpILENIKslkittpiltsppptessltDILVRrsstssasgtvnpkVLLELFSMYRDWQEEKAKQISKRQEEIENKIEVADALATKLLQRFGYSVSAMKTSSQHLSEVHALQVEIGELKGRLTEVISNCDALCKRIAaegpdslkasikplavtttrsevscsssslqkddklessstegkld
Low Complexity Region (SEG)
MGASESTLSSPQSQRPIDDITTVSYKSESVDPILENIKSLKittpiltsppptessltDILVRRSSTSSASGTVNPKVLLELFSMYRDWQEEKAKQISKRQEEIENKIEVADALATKLLQRFGYSVSAMKTSSQHLSEVHALQVEIGELKGRLTEVISNCDALCKRIAAEGPDSLKASIKPLAVTTTRsevscssssLQKDDKLESSSTEGKLD
Disordered region (IsUnstruct)
********************************ILENIKSLKIT*********************************KVLLELFSMYRDW*****************KIEVADALATKLLQRFGYSVSAMKTSSQHLSEVHALQVEIGELKGRLTEVISNCDALCKRIAA*********************************************
Disordered Region (DISOPRED)
***************************ESVDPILENIKSLKITT****************************TVNPKVLLELFSMYRDWQ**************ENKIEVADALATKLLQRFGYSVSAMKTS*Q*LSEVHALQVEIGELKGRLTEVISNCDALCKRIAAEGP**LK**IKPLAV******************************
Disordered Region (DISEMBL)
***************PIDDITTVSYKSESVDPILENIKSLKITTPILT*********TDILV**********TVNPKVLLELFSMYRDWQ***********EEIENKIEVADALATKLLQRFGYSVSA*********EVHALQVEIGELKGRLTEVISNCDALCKRIAAEGPDSLKASIKPLAV******************************
Disordered Region (DISPRO)
****************IDDITTVSYKSESVDPILENIKSLKITTPILTS***T*SSLTDILVRRSS*SSASGTVNPKVLLELFSMYRDWQEEKAKQISKRQEEIENKIEVADALATKLLQRFGYSVSAMKTSSQHLSEVHALQVEIGELKGRLTEVISNCDALCKRIAAEGPDSLKASIKPLAVTTTR**************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGASESTLSSPQSQRPIDDITTVSYKSESVDPILENIKSLKITTPILTSPPPTESSLTDILVRRSSTSSASGTVNPKVLLELFSMYxxxxxxxxxxxxxxxxxxxxxxxxxxxxATKLLQRFGYSVSAMKTSSQHLSEVHALQVEIGELKGRLTEVISNCDALCKRIAAEGPDSLKASIKPLAVTTTRSEVSCSSSSLQKDDKLESSSTEGKLD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
225431179	211	PREDICTED: uncharacterized protein LOC10	0.920	0.933	0.785	9e-80
351726347	208	uncharacterized protein LOC100306649 [Gl	0.967	0.995	0.719	3e-74
388522871	194	unknown [Lotus japonicus]	0.850	0.938	0.760	2e-72
356496663	228	PREDICTED: uncharacterized protein LOC10	0.967	0.907	0.709	3e-72
78499692	201	hypothetical protein [Eutrema halophilum	0.859	0.915	0.697	3e-71
449457554	213	PREDICTED: uncharacterized protein LOC10	0.925	0.929	0.688	8e-71
224094937	209	predicted protein [Populus trichocarpa]	0.831	0.851	0.730	1e-69
297794389	202	hypothetical protein ARALYDRAFT_496977 [	0.915	0.970	0.661	2e-69
15239336	202	uncharacterized protein [Arabidopsis tha	0.850	0.900	0.684	9e-69
224134138	198	predicted protein [Populus trichocarpa]	0.869	0.939	0.716	3e-67

>gi|225431179|ref|XP_002269956.1| PREDICTED: uncharacterized protein LOC100259183 [Vitis vinifera] gi|297735033|emb|CBI17395.3| unnamed protein product [Vitis vinifera]

 Score =  301 bits (772), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 157/200 (78%), Positives = 173/200 (86%), Gaps = 3/200 (1%)

Query: 1   MGASESTLSSPQSQRPIDDITTVSYKSESVDPILENIKSLKITTPILTSPPPTESSLTDI 60
           MGASES LSSPQ  R  D+ITTVS +SE VDP+LE +KSLKI TPILTS P TESSLTDI
Sbjct: 1   MGASESMLSSPQ--RVGDEITTVSERSEDVDPLLECLKSLKIATPILTSLP-TESSLTDI 57

Query: 61  LVRRSSTSSASGTVNPKVLLELFSMYRDWQEEKAKQISKRQEEIENKIEVADALATKLLQ 120
           LVR+ S+SS SGT+NPKVLLELFSMYRDWQEEK ++ISK QEEIENKIEVADALA KL Q
Sbjct: 58  LVRKPSSSSVSGTLNPKVLLELFSMYRDWQEEKTQKISKEQEEIENKIEVADALAIKLHQ 117

Query: 121 RFGYSVSAMKTSSQHLSEVHALQVEIGELKGRLTEVISNCDALCKRIAAEGPDSLKASIK 180
           RF +SVSAMKT+S HLSEVHALQVEIGELKGRLTEVISNCDALCKRIAAEGP+SL+ASIK
Sbjct: 118 RFNFSVSAMKTTSHHLSEVHALQVEIGELKGRLTEVISNCDALCKRIAAEGPESLRASIK 177

Query: 181 PLAVTTTRSEVSCSSSSLQK 200
           P A  T+  E S  SSS+Q+
Sbjct: 178 PFAAATSDLETSFRSSSVQR 197

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726347|ref|NP_001238147.1| uncharacterized protein LOC100306649 [Glycine max] gi|255629179|gb|ACU14934.1| unknown [Glycine max]

 Score =  283 bits (724), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 151/210 (71%), Positives = 173/210 (82%), Gaps = 3/210 (1%)

Query: 1   MGASESTLSSPQSQRPIDDITTVSYKSESVDPILENIKSLKITTPILTSPPPTESSLTDI 60
           MGASEST SS Q+  P D ITT++ +SE+ DPILE +KSLKIT PILTSPP TE +LTDI
Sbjct: 1   MGASESTPSSRQT--PDDKITTITERSEASDPILERLKSLKITPPILTSPP-TEGTLTDI 57

Query: 61  LVRRSSTSSASGTVNPKVLLELFSMYRDWQEEKAKQISKRQEEIENKIEVADALATKLLQ 120
           LVR+ S+SS S TVNPKV+LELFSMY DWQE+KA++ISKRQEEIENKIEVADALA KLLQ
Sbjct: 58  LVRKPSSSSVSATVNPKVILELFSMYHDWQEKKAQEISKRQEEIENKIEVADALAIKLLQ 117

Query: 121 RFGYSVSAMKTSSQHLSEVHALQVEIGELKGRLTEVISNCDALCKRIAAEGPDSLKASIK 180
           R+ +S S MKT+SQHLS VHALQVEIGELKGRLTE ISNCDALC RIA+EGP+SL++SIK
Sbjct: 118 RYNHSTSTMKTASQHLSGVHALQVEIGELKGRLTEAISNCDALCNRIASEGPESLRSSIK 177

Query: 181 PLAVTTTRSEVSCSSSSLQKDDKLESSSTE 210
           P A+ TT  E   SSSSL+   K  S S E
Sbjct: 178 PFAIATTDQETCSSSSSLRTVSKTNSPSAE 207

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388522871|gb|AFK49497.1| unknown [Lotus japonicus]

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 140/184 (76%), Positives = 157/184 (85%), Gaps = 2/184 (1%)

Query: 1   MGASESTLSSPQSQRPIDDITTVSYKSESVDPILENIKSLKITTPILTSPPPTESSLTDI 60
           MGASEST SS Q+    D ITTVS + E  DPILE +KSLK+T PILTSPP TE SLTDI
Sbjct: 1   MGASESTFSSAQTAG--DKITTVSERLEVSDPILERLKSLKMTPPILTSPPQTEGSLTDI 58

Query: 61  LVRRSSTSSASGTVNPKVLLELFSMYRDWQEEKAKQISKRQEEIENKIEVADALATKLLQ 120
           LVR+ S+SSAS TVNPKVLLELFSMYRD+Q EK  +ISKRQEEIEN+IEVADALA KLLQ
Sbjct: 59  LVRKPSSSSASATVNPKVLLELFSMYRDFQGEKVHEISKRQEEIENRIEVADALAIKLLQ 118

Query: 121 RFGYSVSAMKTSSQHLSEVHALQVEIGELKGRLTEVISNCDALCKRIAAEGPDSLKASIK 180
           RF +S+S MKT+SQHLS VH+LQVEIGELKGRL EVISNCDALCKRI AEGP+SL++SIK
Sbjct: 119 RFNHSMSTMKTASQHLSGVHSLQVEIGELKGRLAEVISNCDALCKRIEAEGPESLRSSIK 178

Query: 181 PLAV 184
           P A+
Sbjct: 179 PFAL 182

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496663|ref|XP_003517185.1| PREDICTED: uncharacterized protein LOC100778225 [Glycine max]

 Score =  276 bits (707), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 149/210 (70%), Positives = 171/210 (81%), Gaps = 3/210 (1%)

Query: 1   MGASESTLSSPQSQRPIDDITTVSYKSESVDPILENIKSLKITTPILTSPPPTESSLTDI 60
           MGASESTLSS ++  P D ITT++ +SE+ DPILE +K LKIT PILTSPP TE +LTDI
Sbjct: 21  MGASESTLSSGKT--PDDKITTITERSEASDPILERLKYLKITPPILTSPP-TEGTLTDI 77

Query: 61  LVRRSSTSSASGTVNPKVLLELFSMYRDWQEEKAKQISKRQEEIENKIEVADALATKLLQ 120
           LVR+ S+SS S TVNPKV+LELFS+Y DWQE+KA++IS RQEEIENKIEVADALA KLLQ
Sbjct: 78  LVRKPSSSSVSATVNPKVILELFSIYHDWQEKKAQEISIRQEEIENKIEVADALAIKLLQ 137

Query: 121 RFGYSVSAMKTSSQHLSEVHALQVEIGELKGRLTEVISNCDALCKRIAAEGPDSLKASIK 180
           R+ +S S MKT+SQHLS VH+LQVEIGELKGRLTEVISNCDALCKRIA EGP+SL +SIK
Sbjct: 138 RYNHSTSTMKTASQHLSGVHSLQVEIGELKGRLTEVISNCDALCKRIATEGPESLVSSIK 197

Query: 181 PLAVTTTRSEVSCSSSSLQKDDKLESSSTE 210
           P AVTT   E   SSSSL+   K    S E
Sbjct: 198 PFAVTTANQETYSSSSSLRIVSKTNPPSAE 227

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|78499692|gb|ABB45846.1| hypothetical protein [Eutrema halophilum]

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 129/185 (69%), Positives = 165/185 (89%), Gaps = 1/185 (0%)

Query: 1   MGASESTLSSPQSQRPIDDITTVSYKSESVDPILENIKSLKITTPILTSPPPTESSLTDI 60
           MGAS+STL   Q +R  D ITT+S++SE VDP+LEN+KSL ++TPIL SPP TESSLTDI
Sbjct: 1   MGASDSTLLGAQEKRGGDVITTISHRSEIVDPVLENLKSLTVSTPILKSPP-TESSLTDI 59

Query: 61  LVRRSSTSSASGTVNPKVLLELFSMYRDWQEEKAKQISKRQEEIENKIEVADALATKLLQ 120
           LVR++ +SS+S TV+P++L+ELFS+YR+WQE KA++I+KRQE+IENKIEVADALATKL+Q
Sbjct: 60  LVRKALSSSSSNTVDPQILVELFSIYREWQESKAQEITKRQEDIENKIEVADALATKLVQ 119

Query: 121 RFGYSVSAMKTSSQHLSEVHALQVEIGELKGRLTEVISNCDALCKRIAAEGPDSLKASIK 180
           RF +SVSAM+T+SQHLS+VH LQVE+GELKGRLTEVISNCD LCKRI +EGP+SL++++ 
Sbjct: 120 RFNHSVSAMRTTSQHLSQVHGLQVELGELKGRLTEVISNCDTLCKRINSEGPESLRSTVT 179

Query: 181 PLAVT 185
           P A+T
Sbjct: 180 PFALT 184

Source: Eutrema halophilum

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457554|ref|XP_004146513.1| PREDICTED: uncharacterized protein LOC101208248 isoform 1 [Cucumis sativus] gi|449499959|ref|XP_004160965.1| PREDICTED: uncharacterized LOC101208248 isoform 1 [Cucumis sativus]

 Score =  272 bits (695), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 137/199 (68%), Positives = 166/199 (83%), Gaps = 1/199 (0%)

Query: 1   MGASESTLSSPQSQRPIDDITTVSYKSESVDPILENIKSLKITTPILTSPPPTESSLTDI 60
           MGASES LS   S R  D I+TVS +SE+VDPILE +KSL+ITTPIL SPP TE SLTDI
Sbjct: 1   MGASESALSRSHSARAADVISTVSERSEAVDPILETLKSLQITTPILQSPP-TEGSLTDI 59

Query: 61  LVRRSSTSSASGTVNPKVLLELFSMYRDWQEEKAKQISKRQEEIENKIEVADALATKLLQ 120
           LVR+  +SS + TVNP+VLLELFS+YR WQ+ K ++I+K QE+IENKIEV DALA KLLQ
Sbjct: 60  LVRKPPSSSNAVTVNPQVLLELFSIYRKWQDGKVQEINKNQEDIENKIEVTDALAVKLLQ 119

Query: 121 RFGYSVSAMKTSSQHLSEVHALQVEIGELKGRLTEVISNCDALCKRIAAEGPDSLKASIK 180
           R  +SVSA+K++SQHLSEVH+L+VEIGELKGRLTEVISNCDALC+RIA+EGP+SL++SIK
Sbjct: 120 RLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIK 179

Query: 181 PLAVTTTRSEVSCSSSSLQ 199
           P  + T  +  SC+SSS Q
Sbjct: 180 PFVLATADTGSSCNSSSEQ 198

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224094937|ref|XP_002310298.1| predicted protein [Populus trichocarpa] gi|222853201|gb|EEE90748.1| predicted protein [Populus trichocarpa]

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 130/178 (73%), Positives = 151/178 (84%)

Query: 14  QRPIDDITTVSYKSESVDPILENIKSLKITTPILTSPPPTESSLTDILVRRSSTSSASGT 73
           Q+  D+ITTV+ +SE++DPILE +KSLKIT PILTS P  E SL DILVR++S+SSA  T
Sbjct: 12  QKMTDEITTVTERSEALDPILEKLKSLKITRPILTSTPKEEGSLNDILVRKASSSSALAT 71

Query: 74  VNPKVLLELFSMYRDWQEEKAKQISKRQEEIENKIEVADALATKLLQRFGYSVSAMKTSS 133
           VNP VLLEL S+YRDWQ+ K +QIS +QEEIENKIEVADALA KLLQR  YSVSAMKTSS
Sbjct: 72  VNPNVLLELISIYRDWQDGKVQQISMKQEEIENKIEVADALAIKLLQRLNYSVSAMKTSS 131

Query: 134 QHLSEVHALQVEIGELKGRLTEVISNCDALCKRIAAEGPDSLKASIKPLAVTTTRSEV 191
           QHLSEVH+LQVEIGELKGRLTEV+SNCDALCKRIA EGP+SL++S+KP A     SE+
Sbjct: 132 QHLSEVHSLQVEIGELKGRLTEVMSNCDALCKRIATEGPESLRSSVKPFATAAVDSEI 189

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297794389|ref|XP_002865079.1| hypothetical protein ARALYDRAFT_496977 [Arabidopsis lyrata subsp. lyrata] gi|297310914|gb|EFH41338.1| hypothetical protein ARALYDRAFT_496977 [Arabidopsis lyrata subsp. lyrata]

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 131/198 (66%), Positives = 169/198 (85%), Gaps = 2/198 (1%)

Query: 1   MGASESTLSSPQSQRPIDDITTVSYKSESVDPILENIKSLKITTPILTSPPPTESSLTDI 60
           MGAS+STL   Q  R  D ITT+S++SE VDPILEN+K+L ++ PIL SPP TESSLTDI
Sbjct: 1   MGASDSTLLGSQENRGGDVITTISHRSEIVDPILENLKALTVSRPILKSPP-TESSLTDI 59

Query: 61  LVRRSSTSSASGTVNPKVLLELFSMYRDWQEEKAKQISKRQEEIENKIEVADALATKLLQ 120
           LVR++ +SS+S TV+P++LLELFS+YR WQE KA+ I+KRQE+IENKIEVADALATK+LQ
Sbjct: 60  LVRKALSSSSSNTVDPQILLELFSIYRQWQESKAQDITKRQEDIENKIEVADALATKILQ 119

Query: 121 RFGYSVSAMKTSSQHLSEVHALQVEIGELKGRLTEVISNCDALCKRIAAEGPDSLKASIK 180
           RF +SVSAM+T+SQHLS+VH LQVE+GELKGRLTEVISNCD LCKRI +EGP+SL++++ 
Sbjct: 120 RFNHSVSAMRTTSQHLSQVHGLQVELGELKGRLTEVISNCDTLCKRINSEGPESLRSTVT 179

Query: 181 PLAVTTTRSEVSCSSSSL 198
           P ++ +  S VS ++++L
Sbjct: 180 PFSLASPDS-VSINTTTL 196

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15239336|ref|NP_201430.1| uncharacterized protein [Arabidopsis thaliana] gi|10177423|dbj|BAB10708.1| unnamed protein product [Arabidopsis thaliana] gi|332010812|gb|AED98195.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  265 bits (677), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 126/184 (68%), Positives = 162/184 (88%), Gaps = 2/184 (1%)

Query: 1   MGASESTLSSPQSQRPIDDITTVSYKSESVDPILENIKSLKITTPILTSPPPTESSLTDI 60
           MGAS+STL   Q  R  D ITT+S++SE VDPILEN+K+L ++ PIL SPP TESSLTDI
Sbjct: 1   MGASDSTLLGSQENRG-DVITTISHRSEIVDPILENLKALTVSRPILKSPP-TESSLTDI 58

Query: 61  LVRRSSTSSASGTVNPKVLLELFSMYRDWQEEKAKQISKRQEEIENKIEVADALATKLLQ 120
           LVR++ +SS+S TV+P++L+ELFS+YR+WQE KA++I+KRQE+IENKIEVADALATKLLQ
Sbjct: 59  LVRKALSSSSSNTVDPQILVELFSIYREWQENKAQEITKRQEDIENKIEVADALATKLLQ 118

Query: 121 RFGYSVSAMKTSSQHLSEVHALQVEIGELKGRLTEVISNCDALCKRIAAEGPDSLKASIK 180
           RF +SVSAM+T++QHLS+VH LQVE+GELKGRLTEVISNCD LCKRI +EGP+SL++++ 
Sbjct: 119 RFNHSVSAMRTTAQHLSQVHGLQVELGELKGRLTEVISNCDTLCKRINSEGPESLRSTVA 178

Query: 181 PLAV 184
           P ++
Sbjct: 179 PFSL 182

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134138|ref|XP_002327765.1| predicted protein [Populus trichocarpa] gi|222836850|gb|EEE75243.1| predicted protein [Populus trichocarpa]

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 134/187 (71%), Positives = 158/187 (84%), Gaps = 1/187 (0%)

Query: 14  QRPIDDITTVSYKSESVDPILENIKSLKITTPILTSPPPTESSLTDILVRRSSTSSASGT 73
           Q+  D+ITTV+ +SE+VDPILE ++SLKIT PILTSP   E SLTDILVR++S SSA   
Sbjct: 12  QKLTDEITTVTERSEAVDPILERLESLKITRPILTSPRKEEGSLTDILVRKASASSAPA- 70

Query: 74  VNPKVLLELFSMYRDWQEEKAKQISKRQEEIENKIEVADALATKLLQRFGYSVSAMKTSS 133
           VNP VLLELFS+YRDW E K +QISK+QEEI NKIEVAD LA KLLQRF YSVSAMKT+S
Sbjct: 71  VNPNVLLELFSIYRDWLEAKVQQISKKQEEIGNKIEVADVLAIKLLQRFNYSVSAMKTAS 130

Query: 134 QHLSEVHALQVEIGELKGRLTEVISNCDALCKRIAAEGPDSLKASIKPLAVTTTRSEVSC 193
           Q+LSEVH+LQVEIGELKGRLTEVISNCDALC RI +EGP+SL++S+KP +  T  SE+S 
Sbjct: 131 QNLSEVHSLQVEIGELKGRLTEVISNCDALCNRITSEGPESLRSSVKPFSTATADSEISS 190

Query: 194 SSSSLQK 200
           SSSS+Q+
Sbjct: 191 SSSSVQR 197

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
TAIR|locus:2155041	202	AT5G66290 "AT5G66290" [Arabido	0.859	0.910	0.612	1.4e-55

TAIR|locus:2155041 AT5G66290 "AT5G66290" [Arabidopsis thaliana (taxid:3702)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 114/186 (61%), Positives = 149/186 (80%)

Query:     1 MGASESTLSSPQSQRPIDDITTVSYKSESVDPILENIKSLKXXXXXXXXXXXXXXXXXDI 60
             MGAS+STL   Q  R  D ITT+S++SE VDPILEN+K+L                  DI
Sbjct:     1 MGASDSTLLGSQENRG-DVITTISHRSEIVDPILENLKAL-TVSRPILKSPPTESSLTDI 58

Query:    61 LVRRSSTSSASGTVNPKVLLELFSMYRDWQEEKAKQISKRQEEIENKIEVADALATKLLQ 120
             LVR++ +SS+S TV+P++L+ELFS+YR+WQE KA++I+KRQE+IENKIEVADALATKLLQ
Sbjct:    59 LVRKALSSSSSNTVDPQILVELFSIYREWQENKAQEITKRQEDIENKIEVADALATKLLQ 118

Query:   121 RFGYSVSAMKTSSQHLSEVHALQVEIGELKGRLTEVISNCDALCKRIAAEGPDSLKASIK 180
             RF +SVSAM+T++QHLS+VH LQVE+GELKGRLTEVISNCD LCKRI +EGP+SL++++ 
Sbjct:   119 RFNHSVSAMRTTAQHLSQVHGLQVELGELKGRLTEVISNCDTLCKRINSEGPESLRSTVA 178

Query:   181 PLAVTT 186
             P ++ +
Sbjct:   179 PFSLAS 184


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.308   0.124   0.321    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      214       188   0.00087  110 3  10 23  0.40    33
                                                     31  0.42    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  598 (64 KB)
  Total size of DFA:  187 KB (2108 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.37u 0.13s 26.50t   Elapsed:  00:00:02
  Total cpu time:  26.37u 0.13s 26.50t   Elapsed:  00:00:02
  Start:  Fri May 10 01:26:43 2013   End:  Fri May 10 01:26:45 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	214
PF10158	131	LOH1CR12: Tumour suppressor protein; InterPro: IPR	97.37
KOG4515	217	consensus Uncharacterized conserved protein [Funct	83.57

>PF10158 LOH1CR12: Tumour suppressor protein; InterPro: IPR018780 This entry represents a region of 130 amino acids that is the most conserved part of some hypothetical proteins involved in loss of heterozygosity, and thus, tumour suppression []

Probab=97.37  E-value=0.0019  Score=52.13  Aligned_cols=106  Identities=17%  Similarity=0.321  Sum_probs=92.9

Q ss_pred             CCCChHHHHHHHHHhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccchhhhhhhhhhhccccchhhhHhhhhh
Q 028075           72 GTVNPKVLLELFSMYRDWQEEKAKQISKRQEEIENKIEVADALATKLLQRFGYSVSAMKTSSQHLSEVHALQVEIGELKG  151 (214)
Q Consensus        72 ~~~np~v~~ELfS~YreWQe~~a~~isk~QeeienkIE~adalA~KLlQR~n~S~S~Mktts~hL~~V~~LqvevgElKg  151 (214)
                      .-+|+.-++-|-+-|++--...|+.|...|..|.+||.-+|..-.++++-+.---..+..-+.+|+.|+.|...+....-
T Consensus        22 eklds~~~l~Lc~R~Q~HL~~cA~~Va~~Q~~L~~riKevd~~~~~l~~~~~erqk~~~k~ae~L~kv~els~~L~~~~~  101 (131)
T PF10158_consen   22 EKLDSRPVLRLCSRYQEHLNQCAEAVAFDQNALAKRIKEVDQEIAKLLQQMVERQKRFAKFAEQLEKVNELSQQLSRCQS  101 (131)
T ss_pred             HccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46999999999999999999999999999999999999999999999999998888899999999999999999999999


Q ss_pred             HHHHHHhhhHHHHHHHHhcCCcccccccCccc
Q 028075          152 RLTEVISNCDALCKRIAAEGPDSLKASIKPLA  183 (214)
Q Consensus       152 rLteVisncdaLCKRI~~eGPesLr~sv~pfs  183 (214)
                      -|++++..++    +++.-=|+.-|  .-||.
T Consensus       102 lL~~~v~~ie----~LN~~LP~~~R--Lep~~  127 (131)
T PF10158_consen  102 LLNQTVPSIE----TLNEILPEEER--LEPFV  127 (131)
T ss_pred             HHHHHHHHHH----HHHhhCChhhc--CCCCC
Confidence            9999887665    45555566544  44553

The exact function of these proteins is not known.

>KOG4515 consensus Uncharacterized conserved protein [Function unknown]

Probab=83.57  E-value=15  Score=32.89  Aligned_cols=165  Identities=11%  Similarity=0.143  Sum_probs=103.5

Q ss_pred             CCCCCCCCcceeeeecCc-----cCcchHHHhhhcccccCccccCCCCCCCcccceeeccCCCCCCCCCCChHHHHHHHH
Q 028075           10 SPQSQRPIDDITTVSYKS-----ESVDPILENIKSLKITTPILTSPPPTESSLTDILVRRSSTSSASGTVNPKVLLELFS   84 (214)
Q Consensus        10 ~~~~q~~~DeITTVse~~-----e~~DP~LErLkSLkIa~PiL~spp~~EssLtDILvrk~ssSs~S~~~np~v~~ELfS   84 (214)
                      .+++..--|.|-||..|.     ++.||.+.||+.+----|+|+..-.+-.+-+|--        .---+|-.-++.|--
T Consensus        27 ~~~sta~s~~IV~V~~G~i~~~~~~~D~d~~rl~eIP~FlPvl~~~i~~qTn~~~a~--------~lekl~Sq~~~~lct   98 (217)
T KOG4515|consen   27 TRASTARSKGIVTVKDGNIPQEKLEDDEDYKRLTEIPRFLPVLPAVIGKQTNQGAAY--------TLEKLSSQPFFRLCT   98 (217)
T ss_pred             ChhhhcccCCeEEecCCCcccccccccHHHHHHhccchhhhhhHHHhcCCCCcchHH--------HHHHhcchHHHHHHH
Confidence            445555678999999887     6789999999998777777764331100000000        001345556777888


Q ss_pred             HhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccchhhhhhhhhhhccccchhhhHhhhhhHHHHHHhhhHHHH
Q 028075           85 MYRDWQEEKAKQISKRQEEIENKIEVADALATKLLQRFGYSVSAMKTSSQHLSEVHALQVEIGELKGRLTEVISNCDALC  164 (214)
Q Consensus        85 ~YreWQe~~a~~isk~QeeienkIE~adalA~KLlQR~n~S~S~Mktts~hL~~V~~LqvevgElKgrLteVisncdaLC  164 (214)
                      -|++---..|+-+.--|..|-.++.++|+=-+.|+--|-----.--.-+..|+.|..|--.+    .|....|+.--++-
T Consensus        99 R~Q~Hl~~cA~aVA~dQn~lv~r~K~v~~s~~tLf~~~~~~qk~ya~yaeq~~k~n~ls~~l----~riq~~l~~~Vp~l  174 (217)
T KOG4515|consen   99 RLQEHLAVCAKAVAADQNKLVARCKSVEASMITLFEETRAHQKQYAGYAEQLSKLNQLSDDL----CRIQIILEDIVPML  174 (217)
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHhHHHH
Confidence            88888889999999999999999999999999888655321111111233445554444333    34555555555666


Q ss_pred             HHHHhcCCcccccccCccccccCC
Q 028075          165 KRIAAEGPDSLKASIKPLAVTTTR  188 (214)
Q Consensus       165 KRI~~eGPesLr~sv~pfs~a~~~  188 (214)
                      .+|+.-=|+-=  ..-||..-+.+
T Consensus       175 e~lN~~L~~~e--RLePf~~~~d~  196 (217)
T KOG4515|consen  175 ETLNEILTPDE--RLEPFNLGSDL  196 (217)
T ss_pred             HHHHhcCCccc--ccCCcccCccc
Confidence            66665444432  46788766553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	214
3lvg_D	190	LCB, clathrin light chain B; SELF assembly, coated	3e-05

>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190

 Score = 42.1 bits (98), Expect = 3e-05
 Identities = 8/36 (22%), Positives = 17/36 (47%)

Query: 87  RDWQEEKAKQISKRQEEIENKIEVADALATKLLQRF 122
           R W+EE+ K++ +     +   +     A K L+ +
Sbjct: 88  RKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEW 123

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	214
2yy0_A	53	C-MYC-binding protein; conserved hypothetical prot	88.89

>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}

Probab=88.89  E-value=0.25  Score=33.71  Aligned_cols=35  Identities=20%  Similarity=0.415  Sum_probs=31.6

Q ss_pred             hhccccchhhhHhhhhhHHHHHHhhhHHHHHHHHh
Q 028075          135 HLSEVHALQVEIGELKGRLTEVISNCDALCKRIAA  169 (214)
Q Consensus       135 hL~~V~~LqvevgElKgrLteVisncdaLCKRI~~  169 (214)
                      --++|-.|+.|+.|||.+..+....++-||+|+++
T Consensus        17 ~~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~~   51 (53)
T 2yy0_A           17 ENPEIELLRLELAEMKEKYEAIVEENKKLKAKLAQ   51 (53)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            34688999999999999999999999999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00