Citrus Sinensis ID: 028709


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-----
MFWILYGLPVVHPDSTLVITINAVGLALELIYLSIFCFTNICFYFARRTCHLITCLILAYLQTVVGLGLLAEVIFVGVIAIITFLAFHTHTSRSMFVGILCDIFNIIMYASPLTIWHKVITTKSVEYMPFFLSLANFANGCIWTAYALIKLDIYILVSNGLGAILGFIQLVIYACYYKSTPKKGNDDDFVKPKPTEVQHSGAAMA
cEEEEccccccccccEEEEEEHHHHHHHHHHHHHHHHHccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEHHHHHHHHHHHHHHcccccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccHHccHHHHHHHHHHHHHHEEEEEEcccccccccccccccccccccccccccc
cEEEEEcccccccccEEEEEEcHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccHcHccHHHHHHHHHHHHHHHHHHHHccccEEEEccHHHHHHHHHHHHHHHHHHcccccccccccccccccccEcccccccc
mfwilyglpvvhpdstlVITINAVGLALELIYLSIFCFTNICFYFARRTCHLITCLILAYLQTVVGLGLLAEVIFVGVIAIITFLAFHTHTSRSMFVGILCDIFNIIMYASPLTIWHKVITTKSVEYMPFFLSLANFANGCIWTAYALIKLDIYILVSNGLGAILGFIQLVIYACYykstpkkgndddfvkpkptevqhsgaama
MFWILYGLPVVHPDSTLVITINAVGLALELIYLSIFCFTNICFYFARRTCHLITCLILAYLQTVVGLGLLAEVIFVGVIAIITFLAFHTHTSRSMFVGILCDIFNIIMYASPLTIWHKVITTKSVEYMPFFLSLANFANGCIWTAYALIKLDIYILVSNGLGAILGFIQLVIYACYYKSTpkkgndddfvkpkptevqhsgaama
MFWILYGLPVVHPDSTLVITINAVGLALELIYLSIFCFTNICFYFARRTCHLITCLILAYLQTVVGLGLLAEVIFVGVIAIITFLAFHTHTSRSMFVGILCDIFNIIMYASPLTIWHKVITTKSVEYMPFFLSLANFANGCIWTAYALIKLDIYILVSNGLGAILGFIQLVIYACYYKSTPKKGNDDDFVKPKPTEVQHSGAAMA
*FWILYGLPVVHPDSTLVITINAVGLALELIYLSIFCFTNICFYFARRTCHLITCLILAYLQTVVGLGLLAEVIFVGVIAIITFLAFHTHTSRSMFVGILCDIFNIIMYASPLTIWHKVITTKSVEYMPFFLSLANFANGCIWTAYALIKLDIYILVSNGLGAILGFIQLVIYACYYK***************************
MFWILYGLPVVHPDSTLVITINAVGLALELIYLSIFCFTNICFYFARRTCHLITCLILAYLQTVVGLGLLAEVIFVGVIAIITFLAFHTHTSRSMFVGILCDIFNIIMYASPLTIWHKVITTKSVEYMPFFLSLANFANGCIWTAYALIKLDIYILVSNGLGAILGFIQLVIYAC******************************
MFWILYGLPVVHPDSTLVITINAVGLALELIYLSIFCFTNICFYFARRTCHLITCLILAYLQTVVGLGLLAEVIFVGVIAIITFLAFHTHTSRSMFVGILCDIFNIIMYASPLTIWHKVITTKSVEYMPFFLSLANFANGCIWTAYALIKLDIYILVSNGLGAILGFIQLVIYACYYKSTPKKGNDDDFVKPKP***********
MFWILYGLPVVHPDSTLVITINAVGLALELIYLSIFCFTNICFYFARRTCHLITCLILAYLQTVVGLGLLAEVIFVGVIAIITFLAFHTHTSRSMFVGILCDIFNIIMYASPLTIWHKVITTKSVEYMPFFLSLANFANGCIWTAYALIKLDIYILVSNGLGAILGFIQLVIYACYYKST*************************
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooo
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MFWILYGLPVVHPDSTLVITINAVGLALELIYLSIFCFTNICFYFARRTCHLITCLILAYLQTVVGLGLLAEVIFVGVIAIITFLAFHTHTSRSMFVGILCDIFNIIMYASPLTIWHKVITTKSVEYMPFFLSLANFANGCIWTAYALIKLDIYILVSNGLGAILGFIQLVIYACYYKSTPKKGNDDDFVKPKPTEVQHSGAAMA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query205 2.2.26 [Sep-21-2011]
Q944M5251 Bidirectional sugar trans yes no 0.795 0.649 0.555 3e-50
Q8W0K2254 Bidirectional sugar trans yes no 0.902 0.728 0.492 7e-46
A2WSD8259 Bidirectional sugar trans N/A no 0.809 0.640 0.524 9e-46
Q8LR09259 Bidirectional sugar trans no no 0.809 0.640 0.524 1e-45
A2WSD3254 Bidirectional sugar trans N/A no 0.902 0.728 0.487 4e-45
A2YZ24266 Bidirectional sugar trans N/A no 0.829 0.639 0.465 6e-45
Q9FM10240 Bidirectional sugar trans no no 0.848 0.725 0.502 7e-45
Q0J349265 Bidirectional sugar trans no no 0.829 0.641 0.459 3e-44
Q8LBF7258 Bidirectional sugar trans no no 0.848 0.674 0.427 2e-40
Q8LFH5239 Bidirectional sugar trans no no 0.878 0.753 0.455 3e-38
>sp|Q944M5|SWET4_ARATH Bidirectional sugar transporter SWEET4 OS=Arabidopsis thaliana GN=SWEET4 PE=2 SV=1 Back     alignment and function desciption
 Score =  197 bits (502), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 100/180 (55%), Positives = 126/180 (70%), Gaps = 17/180 (9%)

Query: 3   WILYGLPVVHPDSTLVITINAVGLALELIYLSIFCFTNICFYFARRTCHLITCLILAYLQ 62
           W+ YGLP+V PDS LVITIN  GLA+EL+YL+IF      F+F+  +            +
Sbjct: 57  WVFYGLPMVQPDSLLVITINGTGLAIELVYLAIF------FFFSPTS-----------RK 99

Query: 63  TVVGLGLLAEVIFVGVIAIITFLAFHTHTSRSMFVGILCDIFNIIMYASPLTIWHKVITT 122
             VGL L+ E++FVG++A  T L FHTH  RS FVGI C IF  +MY +PLTI  KVI T
Sbjct: 100 VKVGLWLIGEMVFVGIVATCTLLLFHTHNQRSSFVGIFCVIFVSLMYIAPLTIMSKVIKT 159

Query: 123 KSVEYMPFFLSLANFANGCIWTAYALIKLDIYILVSNGLGAILGFIQLVIYACYYKSTPK 182
           KSV+YMPF LSLANF NG +W  YALIK D++IL+ NGLG + G +QL++YACYYK+TPK
Sbjct: 160 KSVKYMPFSLSLANFLNGVVWVIYALIKFDLFILIGNGLGTVSGAVQLILYACYYKTTPK 219




Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.
Arabidopsis thaliana (taxid: 3702)
>sp|Q8W0K2|SWT6B_ORYSJ Bidirectional sugar transporter SWEET6b OS=Oryza sativa subsp. japonica GN=SWEET6B PE=2 SV=1 Back     alignment and function description
>sp|A2WSD8|SWT6A_ORYSI Bidirectional sugar transporter SWEET6a OS=Oryza sativa subsp. indica GN=SWEET6A PE=3 SV=1 Back     alignment and function description
>sp|Q8LR09|SWT6A_ORYSJ Bidirectional sugar transporter SWEET6a OS=Oryza sativa subsp. japonica GN=SWEET6A PE=3 SV=1 Back     alignment and function description
>sp|A2WSD3|SWT6B_ORYSI Bidirectional sugar transporter SWEET6b OS=Oryza sativa subsp. indica GN=SWEET6B PE=3 SV=1 Back     alignment and function description
>sp|A2YZ24|SWT7B_ORYSI Bidirectional sugar transporter SWEET7b OS=Oryza sativa subsp. indica GN=SWEET7B PE=3 SV=1 Back     alignment and function description
>sp|Q9FM10|SWET5_ARATH Bidirectional sugar transporter SWEET5 OS=Arabidopsis thaliana GN=SWEET5 PE=2 SV=2 Back     alignment and function description
>sp|Q0J349|SWT7B_ORYSJ Bidirectional sugar transporter SWEET7b OS=Oryza sativa subsp. japonica GN=SWEET7B PE=3 SV=2 Back     alignment and function description
>sp|Q8LBF7|SWET7_ARATH Bidirectional sugar transporter SWEET7 OS=Arabidopsis thaliana GN=SWEET7 PE=2 SV=1 Back     alignment and function description
>sp|Q8LFH5|SWET8_ARATH Bidirectional sugar transporter SWEET8 OS=Arabidopsis thaliana GN=SWEET8 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query205
224055573242 predicted protein [Populus trichocarpa] 0.902 0.764 0.609 4e-63
225457069234 PREDICTED: bidirectional sugar transport 0.873 0.764 0.552 9e-52
449489556237 PREDICTED: bidirectional sugar transport 0.892 0.772 0.551 1e-50
449446857236 PREDICTED: bidirectional sugar transport 0.887 0.771 0.551 1e-50
225452486254 PREDICTED: bidirectional sugar transport 0.8 0.645 0.569 7e-50
225457066235 PREDICTED: bidirectional sugar transport 0.863 0.753 0.535 9e-50
255552606242 conserved hypothetical protein [Ricinus 0.912 0.772 0.519 2e-49
18405611251 nodulin MtN3-like protein [Arabidopsis t 0.795 0.649 0.555 2e-48
11994120263 unnamed protein product [Arabidopsis tha 0.795 0.619 0.555 2e-48
297818408252 nodulin MtN3 family protein [Arabidopsis 0.795 0.646 0.55 8e-48
>gi|224055573|ref|XP_002298546.1| predicted protein [Populus trichocarpa] gi|222845804|gb|EEE83351.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  246 bits (628), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 125/205 (60%), Positives = 149/205 (72%), Gaps = 20/205 (9%)

Query: 1   MFWILYGLPVVHPDSTLVITINAVGLALELIYLSIFCFTNICFYFARRTCHLITCLILAY 60
           +FWILYGLP+V PDSTLV+TIN+VGL LELIYLSIFC  +      R+   L+       
Sbjct: 55  LFWILYGLPIVKPDSTLVVTINSVGLVLELIYLSIFCIFDTQNK-GRKKVFLV------- 106

Query: 61  LQTVVGLGLLAEVIFVGVIAIITFLAFHTHTSRSMFVGILCDIFNIIMYASPLTIWHKVI 120
                   L  EVIF+  I + TFLAFHTH  R++FVG+ CDIFNI+MYASPLTI  KV+
Sbjct: 107 --------LFGEVIFMAAIVVTTFLAFHTHEKRTLFVGVFCDIFNILMYASPLTIVKKVV 158

Query: 121 TTKSVEYMPFFLSLANFANGCIWTAYALIKLDIYILVSNGLGAILGFIQLVIYACYYKST 180
           TTKSVEYMP  LSLANF NGC+WTAYALI+ DI+ILVSNGLGA  GF+QLV+YA YYKST
Sbjct: 159 TTKSVEYMPLSLSLANFLNGCVWTAYALIRFDIFILVSNGLGAFFGFLQLVLYAFYYKST 218

Query: 181 PKKGNDDDFVKPKPTEVQHSGAAMA 205
           PK+G+ D     KP+E+Q S +  A
Sbjct: 219 PKRGSQD----VKPSEIQLSASDAA 239




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457069|ref|XP_002283068.1| PREDICTED: bidirectional sugar transporter SWEET5 [Vitis vinifera] gi|297733804|emb|CBI15051.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449489556|ref|XP_004158347.1| PREDICTED: bidirectional sugar transporter SWEET5-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449446857|ref|XP_004141187.1| PREDICTED: bidirectional sugar transporter SWEET5-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225452486|ref|XP_002274582.1| PREDICTED: bidirectional sugar transporter SWEET6b [Vitis vinifera] gi|296087682|emb|CBI34938.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225457066|ref|XP_002279850.1| PREDICTED: bidirectional sugar transporter SWEET5 [Vitis vinifera] gi|147768304|emb|CAN64755.1| hypothetical protein VITISV_010543 [Vitis vinifera] gi|297733802|emb|CBI15049.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255552606|ref|XP_002517346.1| conserved hypothetical protein [Ricinus communis] gi|223543357|gb|EEF44888.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|18405611|ref|NP_566829.1| nodulin MtN3-like protein [Arabidopsis thaliana] gi|75164203|sp|Q944M5.1|SWET4_ARATH RecName: Full=Bidirectional sugar transporter SWEET4; Short=AtSWEET4 gi|16226222|gb|AAL16107.1|AF428275_1 unknown protein [Arabidopsis thaliana] gi|25090096|gb|AAN72227.1| At3g28008/At3g28008 [Arabidopsis thaliana] gi|332643870|gb|AEE77391.1| nodulin MtN3-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|11994120|dbj|BAB01122.1| unnamed protein product [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297818408|ref|XP_002877087.1| nodulin MtN3 family protein [Arabidopsis lyrata subsp. lyrata] gi|297322925|gb|EFH53346.1| nodulin MtN3 family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query205
TAIR|locus:505006381251 SWEET4 [Arabidopsis thaliana ( 0.604 0.494 0.604 4.8e-52
UNIPROTKB|A2WSD8259 SWEET6A "Bidirectional sugar t 0.653 0.517 0.567 5.3e-47
UNIPROTKB|Q8LR09259 SWEET6A "Bidirectional sugar t 0.653 0.517 0.567 5.3e-47
UNIPROTKB|Q8W0K2254 SWEET6B "Bidirectional sugar t 0.682 0.551 0.552 8.6e-47
UNIPROTKB|A2WSD3254 SWEET6B "Bidirectional sugar t 0.682 0.551 0.545 3.7e-46
TAIR|locus:2170748240 AtVEX1 "VEGETATIVE CELL EXPRES 0.619 0.529 0.550 9.7e-46
UNIPROTKB|A2YZ24266 SWEET7B "Bidirectional sugar t 0.580 0.447 0.529 8.6e-45
UNIPROTKB|Q0J349265 SWEET7B "Bidirectional sugar t 0.580 0.449 0.521 3.7e-44
TAIR|locus:2123426258 SWEET7 [Arabidopsis thaliana ( 0.809 0.643 0.450 1.1e-39
UNIPROTKB|Q6L568237 SWEET5 "Bidirectional sugar tr 0.575 0.497 0.528 1.5e-39
TAIR|locus:505006381 SWEET4 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 417 (151.9 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
 Identities = 75/124 (60%), Positives = 94/124 (75%)

Query:    65 VGLGLLAEVIFVGVIAIITFLAFHTHTSRSMFVGILCDIFNIIMYASPLTIWHKVITTKS 124
             VGL L+ E++FVG++A  T L FHTH  RS FVGI C IF  +MY +PLTI  KVI TKS
Sbjct:   102 VGLWLIGEMVFVGIVATCTLLLFHTHNQRSSFVGIFCVIFVSLMYIAPLTIMSKVIKTKS 161

Query:   125 VEYMPFFLSLANFANGCIWTAYALIKLDIYILVSNGLGAILGFIQLVIYACYYKSTPKKG 184
             V+YMPF LSLANF NG +W  YALIK D++IL+ NGLG + G +QL++YACYYK+TPK  
Sbjct:   162 VKYMPFSLSLANFLNGVVWVIYALIKFDLFILIGNGLGTVSGAVQLILYACYYKTTPKDD 221

Query:   185 NDDD 188
              D++
Sbjct:   222 EDEE 225


GO:0005886 "plasma membrane" evidence=ISM
GO:0016020 "membrane" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0005887 "integral to plasma membrane" evidence=ISS
GO:0051119 "sugar transmembrane transporter activity" evidence=ISS
UNIPROTKB|A2WSD8 SWEET6A "Bidirectional sugar transporter SWEET6a" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms
UNIPROTKB|Q8LR09 SWEET6A "Bidirectional sugar transporter SWEET6a" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q8W0K2 SWEET6B "Bidirectional sugar transporter SWEET6b" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|A2WSD3 SWEET6B "Bidirectional sugar transporter SWEET6b" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms
TAIR|locus:2170748 AtVEX1 "VEGETATIVE CELL EXPRESSED1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|A2YZ24 SWEET7B "Bidirectional sugar transporter SWEET7b" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms
UNIPROTKB|Q0J349 SWEET7B "Bidirectional sugar transporter SWEET7b" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2123426 SWEET7 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q6L568 SWEET5 "Bidirectional sugar transporter SWEET5" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q944M5SWET4_ARATHNo assigned EC number0.55550.79510.6494yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query205
pfam0308387 pfam03083, MtN3_slv, Sugar efflux transporter for 4e-24
>gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange Back     alignment and domain information
 Score = 90.7 bits (226), Expect = 4e-24
 Identities = 36/86 (41%), Positives = 54/86 (62%)

Query: 95  MFVGILCDIFNIIMYASPLTIWHKVITTKSVEYMPFFLSLANFANGCIWTAYALIKLDIY 154
             +G+LC +F++ ++ SPL+I  KVI TKSVE MPF   LA   +  +W  Y L+K D Y
Sbjct: 1   FLLGLLCVVFSVAVFLSPLSILRKVIKTKSVEGMPFLPFLAGLLSASLWLLYGLLKKDGY 60

Query: 155 ILVSNGLGAILGFIQLVIYACYYKST 180
           I++ NG+G +LG I L+++  Y    
Sbjct: 61  IIIPNGVGCVLGTIYLILFIIYPPKK 86


This family includes proteins such as drosophila saliva, MtN3 involved in root nodule development and a protein involved in activation and expression of recombination activation genes (RAGs). Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This family contains a region of two transmembrane helices that is found in two copies in most members of the family. This family also contains specific sugar efflux transporters that are essential for the maintenance of animal blood glucose levels, plant nectar production, and plant seed and pollen development. In many organisims it meditaes gluose transport; in Arabidopsis it is necessary for pollen viability; and two of the rice homologues are specifically exploited by bacterial pathogens for virulence by means of direct binding of a bacterial effector to the SWEET promoter. Length = 87

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 205
KOG1623243 consensus Multitransmembrane protein [General func 100.0
PF0308387 MtN3_slv: Sugar efflux transporter for intercellul 99.89
KOG1623 243 consensus Multitransmembrane protein [General func 99.53
COG409589 Uncharacterized conserved protein [Function unknow 99.2
PF0308387 MtN3_slv: Sugar efflux transporter for intercellul 98.24
PF0419361 PQ-loop: PQ loop repeat 97.9
TIGR00951 220 2A43 Lysosomal Cystine Transporter. 95.18
TIGR00951220 2A43 Lysosomal Cystine Transporter. 92.98
PF03650119 MPC: Uncharacterised protein family (UPF0041); Int 91.94
smart0067932 CTNS Repeated motif present between transmembrane 91.88
PF10688163 Imp-YgjV: Bacterial inner membrane protein; InterP 88.83
KOG1589118 consensus Uncharacterized conserved protein [Funct 87.24
PRK01021 608 lpxB lipid-A-disaccharide synthase; Reviewed 80.19
>KOG1623 consensus Multitransmembrane protein [General function prediction only] Back     alignment and domain information
Probab=100.00  E-value=3.2e-36  Score=256.82  Aligned_cols=173  Identities=41%  Similarity=0.719  Sum_probs=143.3

Q ss_pred             CeeeeecccccccCCeEEEeehhHHHHHHHHHHHHHHhhccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028709            1 MFWILYGLPVVHPDSTLVITINAVGLALELIYLSIFCFTNICFYFARRTCHLITCLILAYLQTVVGLGLLAEVIFVGVIA   80 (205)
Q Consensus         1 ~lWl~YG~~~l~~~~~~v~~vN~~G~~~~~~Y~~if~~~~~~~~ya~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (205)
                      ++|++||+  +++|...++.+|++|++++++|+.+|+.      ||++|+..          ...   ....+..+++..
T Consensus        53 ~lWl~YG~--~~~~d~llitIN~~G~~ie~~Yi~~f~~------ya~~k~~~----------~~~---~~~~~~~~~~~i  111 (243)
T KOG1623|consen   53 SLWLYYGL--LKVHDYLLITINGIGLVIETVYISIFLY------YAPKKKTV----------KIV---LALVLGVIGLII  111 (243)
T ss_pred             HHHHHhhh--hccCceEEEEEehhcHHHHHHHHHHHhe------ecCchhee----------Eee---ehHHHHHHHHHH
Confidence            47999994  5664457889999999999999999999      99988741          111   112233444455


Q ss_pred             hhhhhhccccccchhhhhhHHHHHHHHHHHhHHHHhhhhhcCCcccccChHHHHHHHHHHHHHhhhhceeCCeeEEechh
Q 028709           81 IITFLAFHTHTSRSMFVGILCDIFNIIMYASPLTIWHKVITTKSVEYMPFFLSLANFANGCIWTAYALIKLDIYILVSNG  160 (205)
Q Consensus        81 ~~~~~~~~~~~~~~~~lG~~~~v~si~~~~SPL~~i~~VirtKst~~l~~~~~~~~~~n~~lW~~YG~l~~D~fI~~pN~  160 (205)
                      +++....|+++.+.+.+|.+|++++++||+|||..+++|+|+||+|.||++++++.++++..|++||++++|.+|.+||+
T Consensus       112 ~~~~~~~~~~~~~~~~lG~vc~~~nI~~~~sPL~~m~~VIktkSvE~mPf~Ls~a~fl~a~~W~lYGlli~D~~IaipN~  191 (243)
T KOG1623|consen  112 LLTLLLFHDPERRVSVLGIVCAVFNISMFAAPLSVIRKVIKTKSVEYMPFPLSFALFLVAVQWLLYGLLIKDFFIAIPNV  191 (243)
T ss_pred             HHHHHhcCCcceeeeeeehhhhhhhHHhhhccHHhhhhheecCceeeechHHHHHHHHHHHHHHHHHHHhcCeEEEcccH
Confidence            56666778888889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhheEEEeCCCCCCCCCCCCCCCCC
Q 028709          161 LGAILGFIQLVIYACYYKSTPKKGNDDDFVKPKP  194 (205)
Q Consensus       161 ~G~~l~~~ql~l~~~y~~~~~~~~~~~~~~~~~~  194 (205)
                      +|..++..|+.+|++|++++.+.....+..++++
T Consensus       192 iG~~l~~~QL~Ly~~y~~~~~~~~~~~~~~~~~~  225 (243)
T KOG1623|consen  192 LGFLLGLIQLILYFKYPKTTEKIVPPKQNKKDVV  225 (243)
T ss_pred             HHHHHHHHHHHHhhhcCCCcccccccccccCCcc
Confidence            9999999999999999988754433333333333



>PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] Back     alignment and domain information
>KOG1623 consensus Multitransmembrane protein [General function prediction only] Back     alignment and domain information
>COG4095 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] Back     alignment and domain information
>PF04193 PQ-loop: PQ loop repeat Back     alignment and domain information
>TIGR00951 2A43 Lysosomal Cystine Transporter Back     alignment and domain information
>TIGR00951 2A43 Lysosomal Cystine Transporter Back     alignment and domain information
>PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function Back     alignment and domain information
>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins Back     alignment and domain information
>PF10688 Imp-YgjV: Bacterial inner membrane protein; InterPro: IPR019629 This entry represents inner membrane proteins, many are YgjV proteins Back     alignment and domain information
>KOG1589 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00