Citrus Sinensis ID: 028709
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 205 | ||||||
| 224055573 | 242 | predicted protein [Populus trichocarpa] | 0.902 | 0.764 | 0.609 | 4e-63 | |
| 225457069 | 234 | PREDICTED: bidirectional sugar transport | 0.873 | 0.764 | 0.552 | 9e-52 | |
| 449489556 | 237 | PREDICTED: bidirectional sugar transport | 0.892 | 0.772 | 0.551 | 1e-50 | |
| 449446857 | 236 | PREDICTED: bidirectional sugar transport | 0.887 | 0.771 | 0.551 | 1e-50 | |
| 225452486 | 254 | PREDICTED: bidirectional sugar transport | 0.8 | 0.645 | 0.569 | 7e-50 | |
| 225457066 | 235 | PREDICTED: bidirectional sugar transport | 0.863 | 0.753 | 0.535 | 9e-50 | |
| 255552606 | 242 | conserved hypothetical protein [Ricinus | 0.912 | 0.772 | 0.519 | 2e-49 | |
| 18405611 | 251 | nodulin MtN3-like protein [Arabidopsis t | 0.795 | 0.649 | 0.555 | 2e-48 | |
| 11994120 | 263 | unnamed protein product [Arabidopsis tha | 0.795 | 0.619 | 0.555 | 2e-48 | |
| 297818408 | 252 | nodulin MtN3 family protein [Arabidopsis | 0.795 | 0.646 | 0.55 | 8e-48 |
| >gi|224055573|ref|XP_002298546.1| predicted protein [Populus trichocarpa] gi|222845804|gb|EEE83351.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 149/205 (72%), Gaps = 20/205 (9%)
Query: 1 MFWILYGLPVVHPDSTLVITINAVGLALELIYLSIFCFTNICFYFARRTCHLITCLILAY 60
+FWILYGLP+V PDSTLV+TIN+VGL LELIYLSIFC + R+ L+
Sbjct: 55 LFWILYGLPIVKPDSTLVVTINSVGLVLELIYLSIFCIFDTQNK-GRKKVFLV------- 106
Query: 61 LQTVVGLGLLAEVIFVGVIAIITFLAFHTHTSRSMFVGILCDIFNIIMYASPLTIWHKVI 120
L EVIF+ I + TFLAFHTH R++FVG+ CDIFNI+MYASPLTI KV+
Sbjct: 107 --------LFGEVIFMAAIVVTTFLAFHTHEKRTLFVGVFCDIFNILMYASPLTIVKKVV 158
Query: 121 TTKSVEYMPFFLSLANFANGCIWTAYALIKLDIYILVSNGLGAILGFIQLVIYACYYKST 180
TTKSVEYMP LSLANF NGC+WTAYALI+ DI+ILVSNGLGA GF+QLV+YA YYKST
Sbjct: 159 TTKSVEYMPLSLSLANFLNGCVWTAYALIRFDIFILVSNGLGAFFGFLQLVLYAFYYKST 218
Query: 181 PKKGNDDDFVKPKPTEVQHSGAAMA 205
PK+G+ D KP+E+Q S + A
Sbjct: 219 PKRGSQD----VKPSEIQLSASDAA 239
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225457069|ref|XP_002283068.1| PREDICTED: bidirectional sugar transporter SWEET5 [Vitis vinifera] gi|297733804|emb|CBI15051.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449489556|ref|XP_004158347.1| PREDICTED: bidirectional sugar transporter SWEET5-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449446857|ref|XP_004141187.1| PREDICTED: bidirectional sugar transporter SWEET5-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|225452486|ref|XP_002274582.1| PREDICTED: bidirectional sugar transporter SWEET6b [Vitis vinifera] gi|296087682|emb|CBI34938.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225457066|ref|XP_002279850.1| PREDICTED: bidirectional sugar transporter SWEET5 [Vitis vinifera] gi|147768304|emb|CAN64755.1| hypothetical protein VITISV_010543 [Vitis vinifera] gi|297733802|emb|CBI15049.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255552606|ref|XP_002517346.1| conserved hypothetical protein [Ricinus communis] gi|223543357|gb|EEF44888.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|18405611|ref|NP_566829.1| nodulin MtN3-like protein [Arabidopsis thaliana] gi|75164203|sp|Q944M5.1|SWET4_ARATH RecName: Full=Bidirectional sugar transporter SWEET4; Short=AtSWEET4 gi|16226222|gb|AAL16107.1|AF428275_1 unknown protein [Arabidopsis thaliana] gi|25090096|gb|AAN72227.1| At3g28008/At3g28008 [Arabidopsis thaliana] gi|332643870|gb|AEE77391.1| nodulin MtN3-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|11994120|dbj|BAB01122.1| unnamed protein product [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297818408|ref|XP_002877087.1| nodulin MtN3 family protein [Arabidopsis lyrata subsp. lyrata] gi|297322925|gb|EFH53346.1| nodulin MtN3 family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 205 | ||||||
| TAIR|locus:505006381 | 251 | SWEET4 [Arabidopsis thaliana ( | 0.604 | 0.494 | 0.604 | 4.8e-52 | |
| UNIPROTKB|A2WSD8 | 259 | SWEET6A "Bidirectional sugar t | 0.653 | 0.517 | 0.567 | 5.3e-47 | |
| UNIPROTKB|Q8LR09 | 259 | SWEET6A "Bidirectional sugar t | 0.653 | 0.517 | 0.567 | 5.3e-47 | |
| UNIPROTKB|Q8W0K2 | 254 | SWEET6B "Bidirectional sugar t | 0.682 | 0.551 | 0.552 | 8.6e-47 | |
| UNIPROTKB|A2WSD3 | 254 | SWEET6B "Bidirectional sugar t | 0.682 | 0.551 | 0.545 | 3.7e-46 | |
| TAIR|locus:2170748 | 240 | AtVEX1 "VEGETATIVE CELL EXPRES | 0.619 | 0.529 | 0.550 | 9.7e-46 | |
| UNIPROTKB|A2YZ24 | 266 | SWEET7B "Bidirectional sugar t | 0.580 | 0.447 | 0.529 | 8.6e-45 | |
| UNIPROTKB|Q0J349 | 265 | SWEET7B "Bidirectional sugar t | 0.580 | 0.449 | 0.521 | 3.7e-44 | |
| TAIR|locus:2123426 | 258 | SWEET7 [Arabidopsis thaliana ( | 0.809 | 0.643 | 0.450 | 1.1e-39 | |
| UNIPROTKB|Q6L568 | 237 | SWEET5 "Bidirectional sugar tr | 0.575 | 0.497 | 0.528 | 1.5e-39 |
| TAIR|locus:505006381 SWEET4 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 417 (151.9 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 75/124 (60%), Positives = 94/124 (75%)
Query: 65 VGLGLLAEVIFVGVIAIITFLAFHTHTSRSMFVGILCDIFNIIMYASPLTIWHKVITTKS 124
VGL L+ E++FVG++A T L FHTH RS FVGI C IF +MY +PLTI KVI TKS
Sbjct: 102 VGLWLIGEMVFVGIVATCTLLLFHTHNQRSSFVGIFCVIFVSLMYIAPLTIMSKVIKTKS 161
Query: 125 VEYMPFFLSLANFANGCIWTAYALIKLDIYILVSNGLGAILGFIQLVIYACYYKSTPKKG 184
V+YMPF LSLANF NG +W YALIK D++IL+ NGLG + G +QL++YACYYK+TPK
Sbjct: 162 VKYMPFSLSLANFLNGVVWVIYALIKFDLFILIGNGLGTVSGAVQLILYACYYKTTPKDD 221
Query: 185 NDDD 188
D++
Sbjct: 222 EDEE 225
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| UNIPROTKB|A2WSD8 SWEET6A "Bidirectional sugar transporter SWEET6a" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8LR09 SWEET6A "Bidirectional sugar transporter SWEET6a" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8W0K2 SWEET6B "Bidirectional sugar transporter SWEET6b" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A2WSD3 SWEET6B "Bidirectional sugar transporter SWEET6b" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
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| TAIR|locus:2170748 AtVEX1 "VEGETATIVE CELL EXPRESSED1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A2YZ24 SWEET7B "Bidirectional sugar transporter SWEET7b" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q0J349 SWEET7B "Bidirectional sugar transporter SWEET7b" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2123426 SWEET7 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q6L568 SWEET5 "Bidirectional sugar transporter SWEET5" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 205 | |||
| pfam03083 | 87 | pfam03083, MtN3_slv, Sugar efflux transporter for | 4e-24 |
| >gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange | Back alignment and domain information |
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Score = 90.7 bits (226), Expect = 4e-24
Identities = 36/86 (41%), Positives = 54/86 (62%)
Query: 95 MFVGILCDIFNIIMYASPLTIWHKVITTKSVEYMPFFLSLANFANGCIWTAYALIKLDIY 154
+G+LC +F++ ++ SPL+I KVI TKSVE MPF LA + +W Y L+K D Y
Sbjct: 1 FLLGLLCVVFSVAVFLSPLSILRKVIKTKSVEGMPFLPFLAGLLSASLWLLYGLLKKDGY 60
Query: 155 ILVSNGLGAILGFIQLVIYACYYKST 180
I++ NG+G +LG I L+++ Y
Sbjct: 61 IIIPNGVGCVLGTIYLILFIIYPPKK 86
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This family includes proteins such as drosophila saliva, MtN3 involved in root nodule development and a protein involved in activation and expression of recombination activation genes (RAGs). Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This family contains a region of two transmembrane helices that is found in two copies in most members of the family. This family also contains specific sugar efflux transporters that are essential for the maintenance of animal blood glucose levels, plant nectar production, and plant seed and pollen development. In many organisims it meditaes gluose transport; in Arabidopsis it is necessary for pollen viability; and two of the rice homologues are specifically exploited by bacterial pathogens for virulence by means of direct binding of a bacterial effector to the SWEET promoter. Length = 87 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 205 | |||
| KOG1623 | 243 | consensus Multitransmembrane protein [General func | 100.0 | |
| PF03083 | 87 | MtN3_slv: Sugar efflux transporter for intercellul | 99.89 | |
| KOG1623 | 243 | consensus Multitransmembrane protein [General func | 99.53 | |
| COG4095 | 89 | Uncharacterized conserved protein [Function unknow | 99.2 | |
| PF03083 | 87 | MtN3_slv: Sugar efflux transporter for intercellul | 98.24 | |
| PF04193 | 61 | PQ-loop: PQ loop repeat | 97.9 | |
| TIGR00951 | 220 | 2A43 Lysosomal Cystine Transporter. | 95.18 | |
| TIGR00951 | 220 | 2A43 Lysosomal Cystine Transporter. | 92.98 | |
| PF03650 | 119 | MPC: Uncharacterised protein family (UPF0041); Int | 91.94 | |
| smart00679 | 32 | CTNS Repeated motif present between transmembrane | 91.88 | |
| PF10688 | 163 | Imp-YgjV: Bacterial inner membrane protein; InterP | 88.83 | |
| KOG1589 | 118 | consensus Uncharacterized conserved protein [Funct | 87.24 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 80.19 |
| >KOG1623 consensus Multitransmembrane protein [General function prediction only] | Back alignment and domain information |
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Probab=100.00 E-value=3.2e-36 Score=256.82 Aligned_cols=173 Identities=41% Similarity=0.719 Sum_probs=143.3
Q ss_pred CeeeeecccccccCCeEEEeehhHHHHHHHHHHHHHHhhccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028709 1 MFWILYGLPVVHPDSTLVITINAVGLALELIYLSIFCFTNICFYFARRTCHLITCLILAYLQTVVGLGLLAEVIFVGVIA 80 (205)
Q Consensus 1 ~lWl~YG~~~l~~~~~~v~~vN~~G~~~~~~Y~~if~~~~~~~~ya~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (205)
++|++||+ +++|...++.+|++|++++++|+.+|+. ||++|+.. ... ....+..+++..
T Consensus 53 ~lWl~YG~--~~~~d~llitIN~~G~~ie~~Yi~~f~~------ya~~k~~~----------~~~---~~~~~~~~~~~i 111 (243)
T KOG1623|consen 53 SLWLYYGL--LKVHDYLLITINGIGLVIETVYISIFLY------YAPKKKTV----------KIV---LALVLGVIGLII 111 (243)
T ss_pred HHHHHhhh--hccCceEEEEEehhcHHHHHHHHHHHhe------ecCchhee----------Eee---ehHHHHHHHHHH
Confidence 47999994 5664457889999999999999999999 99988741 111 112233444455
Q ss_pred hhhhhhccccccchhhhhhHHHHHHHHHHHhHHHHhhhhhcCCcccccChHHHHHHHHHHHHHhhhhceeCCeeEEechh
Q 028709 81 IITFLAFHTHTSRSMFVGILCDIFNIIMYASPLTIWHKVITTKSVEYMPFFLSLANFANGCIWTAYALIKLDIYILVSNG 160 (205)
Q Consensus 81 ~~~~~~~~~~~~~~~~lG~~~~v~si~~~~SPL~~i~~VirtKst~~l~~~~~~~~~~n~~lW~~YG~l~~D~fI~~pN~ 160 (205)
+++....|+++.+.+.+|.+|++++++||+|||..+++|+|+||+|.||++++++.++++..|++||++++|.+|.+||+
T Consensus 112 ~~~~~~~~~~~~~~~~lG~vc~~~nI~~~~sPL~~m~~VIktkSvE~mPf~Ls~a~fl~a~~W~lYGlli~D~~IaipN~ 191 (243)
T KOG1623|consen 112 LLTLLLFHDPERRVSVLGIVCAVFNISMFAAPLSVIRKVIKTKSVEYMPFPLSFALFLVAVQWLLYGLLIKDFFIAIPNV 191 (243)
T ss_pred HHHHHhcCCcceeeeeeehhhhhhhHHhhhccHHhhhhheecCceeeechHHHHHHHHHHHHHHHHHHHhcCeEEEcccH
Confidence 56666778888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhheEEEeCCCCCCCCCCCCCCCCC
Q 028709 161 LGAILGFIQLVIYACYYKSTPKKGNDDDFVKPKP 194 (205)
Q Consensus 161 ~G~~l~~~ql~l~~~y~~~~~~~~~~~~~~~~~~ 194 (205)
+|..++..|+.+|++|++++.+.....+..++++
T Consensus 192 iG~~l~~~QL~Ly~~y~~~~~~~~~~~~~~~~~~ 225 (243)
T KOG1623|consen 192 LGFLLGLIQLILYFKYPKTTEKIVPPKQNKKDVV 225 (243)
T ss_pred HHHHHHHHHHHHhhhcCCCcccccccccccCCcc
Confidence 9999999999999999988754433333333333
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| >PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] | Back alignment and domain information |
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| >KOG1623 consensus Multitransmembrane protein [General function prediction only] | Back alignment and domain information |
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| >COG4095 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
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| >PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] | Back alignment and domain information |
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| >PF04193 PQ-loop: PQ loop repeat | Back alignment and domain information |
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| >TIGR00951 2A43 Lysosomal Cystine Transporter | Back alignment and domain information |
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| >TIGR00951 2A43 Lysosomal Cystine Transporter | Back alignment and domain information |
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| >PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function | Back alignment and domain information |
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| >smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins | Back alignment and domain information |
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| >PF10688 Imp-YgjV: Bacterial inner membrane protein; InterPro: IPR019629 This entry represents inner membrane proteins, many are YgjV proteins | Back alignment and domain information |
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| >KOG1589 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
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| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00