Citrus Sinensis ID: 028840

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200---
Protein Sequence
MELCTAIQTQSAISNHHHPFLTATTAPALARTKSALSLKQTTVSRSGILYYTNPLPKATSEETSSGTDQYVVDKRDGATAAEDVPAVEKNVYNESVATAVPKEESPVDGLTNELLDNLKIKFDSEDKYSLVLYGTGALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRDELATKIEELKQQVLGSNDD
Secondary Structure (PSIPRED)
ccccHHHHccccccccccccccccccHHHHHcccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHEEEHHHHHHHcccccHHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
cccEEEccccHcHcccccccccccccccHccccccccccccccccccEEEccccccccccccccccccEEEEEcccccEEEcccccccccccccccHHHcccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
melctaiqtqsaisnhhhpfltattapaLARTKSALslkqttvsrsgilyytnplpkatseetssgtdqyvvdkrdgataaedvpaveknvynesvatavpkeespvdgltnELLDNLkikfdsedkysLVLYGTGALLALWLTTVVVGaidsiplfpKLMEVVGLGYTLWFSWRYLLFKKNRDELATKIEELKQQVLGSNDD
Flexible Loop (DISEMBL)
MELCTAIQTqsaisnhhhpFLTATTAPALARTKSALslkqttvsrsgilyytnplpkatseetssgtdqYVVDKRDGAtaaedvpaveknvynesvatavpkeespvdglTNELLDNLKIKFDSEDKYSLVLYGTGALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRDELATKIEelkqqvlgsndd
Low Complexity Region (SEG)
MELCTAIQTQSAISNHHHPFltattapalartKSALSLKQTTVSRSGILYYTNPLPKATSEETSSGTDQYVVDKRDGATAAEDVPAVEKNVYNESVATAVPKEESPVDGLTNELLDNLKIKFDSEDKYSLVLYgtgallalwlttvvvgaIDSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRDELATKIEELKQQVLGSNDD
Disordered region (IsUnstruct)
******************PFLTATTA**************TTVSRSGILYYT*********************************************************LTNELLDNLKIKFDSEDKYSLVLYGTGALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRDEL*****************
Disordered Region (DISOPRED)
***************************************************************************************************************NELLDNLKIKFDSEDKYSLVLYGTGALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRDELATKIEELKQ*VLG****
Disordered Region (DISEMBL)
********TQSAISNHHHPFLTATTAPALARTKSALSLKQTTVSRSGILYYTNPLP***********DQYVVDKRDGATAAEDVPAVEKNVYNESVATAVPKEESPVDGLTNELLDNLKIKFDSEDKYSLVLYGTGALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRDELATKIEELKQ********
Disordered Region (DISPRO)
*ELCTAIQTQSAISNHHHPFLTAT*****************************PLPK*********TDQYVVDKRDGATAAEDVP*******************SPVDGLTNELLDNLKIKFDSEDKYSLVLYGTGALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRDELATKIEELKQQVLG****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MELCTAIQTQSAISNHHHPFLTATTAPALARTKSALSLKQTTVSRSGILYYTNPLPKATSEETSSGTDQYVVDKRDGATAAEDVPAVEKNVYNESVATAVPKEESPVDGLTNELLDNLKIKFDSEDKYSLVLYGTGALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	203	2.2.26 [Sep-21-2011]
O04616	164	Uncharacterized protein A	no	no	0.492	0.609	0.553	3e-26
Q8LCA1	174	Thylakoid membrane phosph	no	no	0.379	0.442	0.376	1e-11
Q119Z5	881	Glutamate--tRNA ligase OS	yes	no	0.517	0.119	0.317	3e-10

>sp|O04616|Y4115_ARATH Uncharacterized protein At4g01150, chloroplastic OS=Arabidopsis thaliana GN=At4g01150 PE=1 SV=1

 Score =  118 bits (295), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/103 (55%), Positives = 82/103 (79%), Gaps = 3/103 (2%)

Query: 99  AVPKEESPVDGLTNELLDNLKIKFDS-EDKYSLVLYGTGALLALWLTTVVVGAIDSIPLF 157
           A  +E S +D  TNEL+ +LK K+D  E+K ++++YG GA++A+WL+++VVGAI+S+PL 
Sbjct: 63  ASSEETSSID--TNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLL 120

Query: 158 PKLMEVVGLGYTLWFSWRYLLFKKNRDELATKIEELKQQVLGS 200
           PK+ME+VGLGYT WF +RYLLFK +R ELA  IE LK+++ GS
Sbjct: 121 PKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGS 163

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LCA1|TMP14_ARATH Thylakoid membrane phosphoprotein 14 kDa, chloroplastic OS=Arabidopsis thaliana GN=TMP14 PE=1 SV=2

 Score = 69.7 bits (169), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 53/77 (68%)

Query: 125 EDKYSLVLYGTGALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRD 184
           +DKY++       ++ALW +  ++ AID +PL P ++E+VG+GYT WF+++ L+FK +R+
Sbjct: 98  DDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDRE 157

Query: 185 ELATKIEELKQQVLGSN 201
            L  K++   + +LGS+
Sbjct: 158 ALFEKVKSTYKDILGSS 174

Arabidopsis thaliana (taxid: 3702)

>sp|Q119Z5|SYE_TRIEI Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) GN=gltX PE=3 SV=1

 Score = 65.1 bits (157), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 68/126 (53%), Gaps = 21/126 (16%)

Query: 95  SVATAVPKEESPVDGLTNELLD----------NLKIKFDSEDKYSLV---------LYGT 135
            V T++  ++ PVD +TN+ ++           + I F+  D  + +         L+G 
Sbjct: 753 QVETSILDDQKPVDTVTNQTVEVEQPNKIKEQFINIFFNFPDYINQLYQQYQGQLKLFGW 812

Query: 136 GALLALWLT--TVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRDELATKIEEL 193
            AL+ L  T   VV+ A+D IP+   + E++G+ Y +WF +RYLL + NR EL  KIE +
Sbjct: 813 LALVILTFTFMAVVIEALDGIPILSIIFELIGVIYLVWFVYRYLLKRSNRQELLDKIENI 872

Query: 194 KQQVLG 199
           K+++ G
Sbjct: 873 KREIFG 878

Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).

Trichodesmium erythraeum (strain IMS101) (taxid: 203124)

EC: 6

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	203
225469778	204	PREDICTED: uncharacterized protein LOC10	0.980	0.975	0.586	2e-59
359495653	204	PREDICTED: uncharacterized protein LOC10	0.980	0.975	0.586	4e-59
388506910	199	unknown [Lotus japonicus]	0.837	0.854	0.523	2e-40
351723571	197	uncharacterized protein LOC100499731 [Gl	0.798	0.822	0.523	4e-39
351727288	200	uncharacterized protein LOC100305966 [Gl	0.763	0.775	0.529	3e-37
357485585	182	Glutamyl-tRNA synthetase [Medicago trunc	0.773	0.862	0.532	7e-37
297798056	194	threonine endopeptidase [Arabidopsis lyr	0.921	0.963	0.423	1e-34
18420175	193	uncharacterized protein [Arabidopsis tha	0.911	0.958	0.436	6e-34
4467116	153	hypothetical protein [Arabidopsis thalia	0.714	0.947	0.487	8e-32
449508380	210	PREDICTED: uncharacterized protein At4g0	0.763	0.738	0.384	4e-31

>gi|225469778|ref|XP_002274430.1| PREDICTED: uncharacterized protein LOC100261101 [Vitis vinifera] gi|297735928|emb|CBI18704.3| unnamed protein product [Vitis vinifera]

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 122/208 (58%), Positives = 147/208 (70%), Gaps = 9/208 (4%)

Query: 1   MELCTAIQTQSAISNHHHPFLTATTAPALARTKSALSLKQTTVSRS--GILYYTNPLPKA 58
           MELCT      A SN HH  L    A  L     ++  KQ+ +SR+  G LY+ NPL +A
Sbjct: 1   MELCTT----RAFSNLHHRTLFNPLANRLRWKTISIPFKQSPISRTSPGSLYFNNPLLRA 56

Query: 59  T-SEETSSGTDQYVVDKRDGATAAEDVPAVEKNVYNESVATAVPKEESPVDGLT--NELL 115
           + SE +SSG DQY+ ++RD     ED+PA E+NVYNE + T  P E+S V+  T   E L
Sbjct: 57  SISEGSSSGADQYIGEERDSVLVMEDIPATEENVYNEVIPTEAPIEDSQVEEQTVAFEFL 116

Query: 116 DNLKIKFDSEDKYSLVLYGTGALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWR 175
           DNL IKFDSED YS+ LYGTGAL ALW  + +VGAIDSIP+FPKLME+VGLGYTLWFS R
Sbjct: 117 DNLNIKFDSEDPYSIFLYGTGALTALWFASAIVGAIDSIPIFPKLMEIVGLGYTLWFSAR 176

Query: 176 YLLFKKNRDELATKIEELKQQVLGSNDD 203
           YL+FK+NRDELA KIEELKQQVLGS D+
Sbjct: 177 YLIFKQNRDELAAKIEELKQQVLGSEDE 204

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495653|ref|XP_003635047.1| PREDICTED: uncharacterized protein LOC100853187 isoform 1 [Vitis vinifera] gi|359495655|ref|XP_003635048.1| PREDICTED: uncharacterized protein LOC100853187 isoform 2 [Vitis vinifera] gi|297735931|emb|CBI18707.3| unnamed protein product [Vitis vinifera]

 Score =  233 bits (594), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 122/208 (58%), Positives = 146/208 (70%), Gaps = 9/208 (4%)

Query: 1   MELCTAIQTQSAISNHHHPFLTATTAPALARTKSALSLKQTTVSRS--GILYYTNPLPKA 58
           MELCT      A SN HH  L    A  L     ++  KQ+ +SR+  G LY+ NPL +A
Sbjct: 1   MELCTT----RAFSNLHHRTLFNPLANRLRWKTISIPFKQSPISRTSPGSLYFNNPLLRA 56

Query: 59  T-SEETSSGTDQYVVDKRDGATAAEDVPAVEKNVYNESVATAVPKEESPVDGLT--NELL 115
           + SE +SSG DQY  ++RD     ED+PA E+NVYNE + T  P E+S V+  T   E L
Sbjct: 57  SISEGSSSGADQYFGEERDSVLVMEDIPATEENVYNEVIPTEAPIEDSQVEEQTVAFEFL 116

Query: 116 DNLKIKFDSEDKYSLVLYGTGALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWR 175
           DNL IKFDSED YS+ LYGTGAL ALW  + +VGAIDSIP+FPKLME+VGLGYTLWFS R
Sbjct: 117 DNLNIKFDSEDPYSIFLYGTGALTALWFASAIVGAIDSIPIFPKLMEIVGLGYTLWFSAR 176

Query: 176 YLLFKKNRDELATKIEELKQQVLGSNDD 203
           YL+FK+NRDELA KIEELKQQVLGS D+
Sbjct: 177 YLIFKQNRDELAAKIEELKQQVLGSEDE 204

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388506910|gb|AFK41521.1| unknown [Lotus japonicus]

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 90/172 (52%), Positives = 122/172 (70%), Gaps = 2/172 (1%)

Query: 31  RTKSALSLKQTTVSRSGILYYTNPLPKATSEETSSGTDQYVVDKRDGATAAEDVPAVEKN 90
           R ++ ++     +SRS  ++  N L +ATS + +SG+  +  +KRDG    +DV    +N
Sbjct: 29  RQQTLITPSAALLSRS--IFVRNLLTRATSSDETSGSSSFYGEKRDGVVILDDVKGAGEN 86

Query: 91  VYNESVATAVPKEESPVDGLTNELLDNLKIKFDSEDKYSLVLYGTGALLALWLTTVVVGA 150
            ++E+V +  PKEE PVD     LLD+L +K D  D  S+VLYG+GA++ALWL + V+GA
Sbjct: 87  GFSETVVSQDPKEEVPVDEQAFALLDDLNMKLDLNDTGSIVLYGSGAVVALWLLSAVIGA 146

Query: 151 IDSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRDELATKIEELKQQVLGSND 202
           IDSIPLFPKL+EVVGL YT+WF+ RYLLFKKNRDEL  KIEELK+QV+GS D
Sbjct: 147 IDSIPLFPKLLEVVGLSYTVWFTTRYLLFKKNRDELGAKIEELKEQVIGSED 198

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723571|ref|NP_001235236.1| uncharacterized protein LOC100499731 [Glycine max] gi|255626121|gb|ACU13405.1| unknown [Glycine max]

 Score =  166 bits (421), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 90/172 (52%), Positives = 119/172 (69%), Gaps = 10/172 (5%)

Query: 40  QTTVSRSGILY-----YTNPLPKA-TSEETSSGTDQYVVDKRDGATAAEDVPAVEKNVYN 93
           QT ++ S +L        N LPKA +SEE S+G  Q+  +KRDG    E+V    KN ++
Sbjct: 28  QTPLTHSAVLLSRSICLRNLLPKAMSSEERSTGGSQFFNEKRDGVIILENVKEDNKNEFD 87

Query: 94  ESVATAVPKEESPVDG--LTNELLDNLKIKFDSEDKYSLVLYGTGALLALWLTTVVVGAI 151
           ++V     +EE   DG  L+ +L+D  K+ FD++D  S+VLYG GAL+ALWLT+ V+GAI
Sbjct: 88  KTVIEDTKEEELSDDGQGLSFDLMD--KLNFDTDDTGSIVLYGGGALVALWLTSAVIGAI 145

Query: 152 DSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRDELATKIEELKQQVLGSNDD 203
           DSIPL PKL+EVVGL YT+WF+ RYLLFK+NRDEL  KIEELK Q+ GS D+
Sbjct: 146 DSIPLIPKLLEVVGLAYTVWFTSRYLLFKQNRDELGAKIEELKGQIFGSEDN 197

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727288|ref|NP_001235620.1| uncharacterized protein LOC100305966 [Glycine max] gi|255627137|gb|ACU13913.1| unknown [Glycine max]

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/168 (52%), Positives = 114/168 (67%), Gaps = 13/168 (7%)

Query: 43  VSRSGILYYTNPLPKATSEETSSGTDQYVVDKRDGATAAEDVPAVEKNVYNESVATAVPK 102
           +SRS  L   +P   ++ EE SSG  Q+  +KRDG    EDV   E N  NE   T +  
Sbjct: 39  LSRSVCLRNLSPKATSSEEERSSGGSQFFNEKRDGVIILEDVK--EDNNKNEFDKTVI-- 94

Query: 103 EESPVD-------GLTNELLDNLKIKFDSEDKYSLVLYGTGALLALWLTTVVVGAIDSIP 155
           E++  D       GL+ +LLD  K+ FD++D  S+V+YG GAL+ALWLT+ V+GAIDSIP
Sbjct: 95  EDTKQDLFDDDGQGLSFDLLD--KLNFDTDDTGSIVVYGGGALVALWLTSAVIGAIDSIP 152

Query: 156 LFPKLMEVVGLGYTLWFSWRYLLFKKNRDELATKIEELKQQVLGSNDD 203
           LFPKL+EVVGL YT+WF+ RYLLFK+NRDEL  KIEELK Q+ GS D+
Sbjct: 153 LFPKLLEVVGLAYTVWFTSRYLLFKQNRDELGAKIEELKGQIFGSEDN 200

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357485585|ref|XP_003613080.1| Glutamyl-tRNA synthetase [Medicago truncatula] gi|355514415|gb|AES96038.1| Glutamyl-tRNA synthetase [Medicago truncatula] gi|388495348|gb|AFK35740.1| unknown [Medicago truncatula]

 Score =  159 bits (401), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 90/169 (53%), Positives = 112/169 (66%), Gaps = 12/169 (7%)

Query: 33  KSALSLKQTTVSRSGILYYTNPLPKAT-SEETSSGTDQYVVDKRDGATAAEDVPAVEKNV 91
           K +   K   +SRS  L       +AT SEE  SG  +   +KRDG    E     +KN 
Sbjct: 23  KPSFPPKHALLSRSAFLRNV----RATASEENPSGAGKLFNEKRDGVITLE----ADKNG 74

Query: 92  YNESVATAVPKEESP-VDGLTNELLDNLKIKFDSEDKYSLVLYGTGALLALWLTTVVVGA 150
           YNE+V    PKE  P  +GL  ELLD  K+ FD  D  SL +YG GA++ALWLT+ +VGA
Sbjct: 75  YNETVENEDPKEVLPDGEGLPLELLD--KLNFDINDTTSLAVYGGGAIVALWLTSAIVGA 132

Query: 151 IDSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRDELATKIEELKQQVLG 199
           +DSIP+ PKL EVVGLGY+LWF++RYLLFK+NR+ELA KIEELK+QVLG
Sbjct: 133 VDSIPVIPKLFEVVGLGYSLWFTYRYLLFKRNREELANKIEELKEQVLG 181

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798056|ref|XP_002866912.1| threonine endopeptidase [Arabidopsis lyrata subsp. lyrata] gi|297312748|gb|EFH43171.1| threonine endopeptidase [Arabidopsis lyrata subsp. lyrata]

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/210 (42%), Positives = 129/210 (61%), Gaps = 23/210 (10%)

Query: 1   MELCT---AIQTQSAISNHHHPFLTATTAPALARTKSALSLKQTTVS---RSGILYYTNP 54
           MELCT    + T    SN+ H +L   +   +    S L L +   S   +S  L  +  
Sbjct: 1   MELCTRSTTVITHLPWSNNGHGYLAGKSVHRI----SLLPLHRKVASLVLQSRTLRCSRK 56

Query: 55  LPKAT-SEETSSGTDQYVVDKRDGATAAEDVPAVEKNVYNESVATAVPKEESPVDGLTNE 113
            P  T SEETS+G +++ ++ RDG      V AVE+   N   + A   +   ++ L + 
Sbjct: 57  FPGETVSEETSTGVNEFGLEDRDGV-----VVAVEEKTSNSEASQAEDDQTQALEFLND- 110

Query: 114 LLDNLKIKFDSEDKYSLVLYGTGALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWFS 173
                 IK DS+  YS++LYG+GA++AL+LT+ +V ++++IPLFPKLMEVVGLGYTLWFS
Sbjct: 111 ------IKLDSDKTYSILLYGSGAIVALYLTSAIVSSLEAIPLFPKLMEVVGLGYTLWFS 164

Query: 174 WRYLLFKKNRDELATKIEELKQQVLGSNDD 203
            RYLLFK+NR+EL TK+ E+K+QVLGS+ +
Sbjct: 165 TRYLLFKRNREELKTKVSEIKKQVLGSDSE 194

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18420175|ref|NP_568035.1| uncharacterized protein [Arabidopsis thaliana] gi|21554198|gb|AAM63277.1| unknown [Arabidopsis thaliana] gi|107738205|gb|ABF83661.1| At4g38100 [Arabidopsis thaliana] gi|332661478|gb|AEE86878.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  149 bits (376), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/211 (43%), Positives = 130/211 (61%), Gaps = 26/211 (12%)

Query: 1   MELCT---AIQTQSAISNHHHPFLTATTAPA----LARTKSALSLKQTTVSRSGILYYTN 53
           MELCT    I T    S + H +L   +       L R  ++L L+  T      L  + 
Sbjct: 1   MELCTRSTTIITHLPASFNGHGYLAGKSVDRISLPLQRNVASLVLQSRT------LRCSR 54

Query: 54  PLPKAT-SEETSSGTDQYVVDKRDGATAAEDVPAVEKNVYNESVATAVPKEESPVDGLTN 112
             P  T +EETS+G +++ V+ RDG   A    A EKN  +E    A   E+     L  
Sbjct: 55  KFPGETVTEETSTGVNEFGVEDRDGVVVA----AEEKNSNSE----APQAEDEETQAL-- 104

Query: 113 ELLDNLKIKFDSEDKYSLVLYGTGALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWF 172
           E L++  IK DS+  YS++LYG+GA++AL+LT+ +V ++++IPLFPKLMEVVGLGYTLWF
Sbjct: 105 EFLND--IKLDSDKTYSILLYGSGAIVALYLTSAIVSSLEAIPLFPKLMEVVGLGYTLWF 162

Query: 173 SWRYLLFKKNRDELATKIEELKQQVLGSNDD 203
           + RYLLFK+NR+EL TK+ E+K+QVLGS+ +
Sbjct: 163 TTRYLLFKRNREELKTKVSEIKKQVLGSDSE 193

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4467116|emb|CAB37550.1| hypothetical protein [Arabidopsis thaliana] gi|7270793|emb|CAB80475.1| hypothetical protein [Arabidopsis thaliana]

 Score =  142 bits (358), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 77/158 (48%), Positives = 108/158 (68%), Gaps = 13/158 (8%)

Query: 47  GILYYTNPLPKAT-SEETSSGTDQYVVDKRDGATAAEDVPAVEKNVYNESVATAVPKEES 105
           G L  +   P  T +EETS+G +++ V+ RDG   A    A EKN  +E  A     EE+
Sbjct: 8   GTLRCSRKFPGETVTEETSTGVNEFGVEDRDGVVVA----AEEKNSNSE--APQAEDEET 61

Query: 106 PVDGLTNELLDNLKIKFDSEDKYSLVLYGTGALLALWLTTVVVGAIDSIPLFPKLMEVVG 165
                 N+      IK DS+  YS++LYG+GA++AL+LT+ +V ++++IPLFPKLMEVVG
Sbjct: 62  QALEFLND------IKLDSDKTYSILLYGSGAIVALYLTSAIVSSLEAIPLFPKLMEVVG 115

Query: 166 LGYTLWFSWRYLLFKKNRDELATKIEELKQQVLGSNDD 203
           LGYTLWF+ RYLLFK+NR+EL TK+ E+K+QVLGS+ +
Sbjct: 116 LGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLGSDSE 153

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449508380|ref|XP_004163298.1| PREDICTED: uncharacterized protein At4g01150, chloroplastic-like [Cucumis sativus]

 Score =  140 bits (352), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 108/195 (55%), Gaps = 40/195 (20%)

Query: 47  GILYYTNPLPKATSEETSSGTDQYVVDKRDGATAAEDVPAVEKNVYNES----------V 96
           G  ++   LP+A + + S+G+  +  ++RD  T  ED P+       +S           
Sbjct: 16  GHRHFAVSLPRAAASDESNGSSSFFTEQRDSVTVLEDSPSASSLTLEDSPPEEIPSVVLA 75

Query: 97  ATAVPKEE-----------------------------SPVDGLTNELLDNLK-IKFDSED 126
           AT VPK+E                              P++G   +  + L  +K +S D
Sbjct: 76  ATEVPKQEPVEDVPVITLDDSSSAGKVEMVTSEEPKEQPLEGAQEQAFEFLNDLKLESVD 135

Query: 127 KYSLVLYGTGALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRDEL 186
            YSL LYG GA   +WL + +VGA+DSIPL PKL+EVVGLGY++WF+ RYLLFK++RDEL
Sbjct: 136 TYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDEL 195

Query: 187 ATKIEELKQQVLGSN 201
           A +I+ELK+QVLGS+
Sbjct: 196 AARIDELKEQVLGSD 210

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	203
TAIR|locus:2121065	193	AT4G38100 [Arabidopsis thalian	0.931	0.979	0.381	1.3e-27
TAIR|locus:2125018	164	AT4G01150 "AT4G01150" [Arabido	0.517	0.640	0.449	5.8e-18
TAIR|locus:2044335	174	PSI-P "photosystem I P subunit	0.566	0.660	0.260	1.8e-09
TAIR|locus:2037435	156	AT1G52220 "AT1G52220" [Arabido	0.517	0.673	0.261	2.9e-07

TAIR|locus:2121065 AT4G38100 [Arabidopsis thaliana (taxid:3702)]

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 79/207 (38%), Positives = 116/207 (56%)

Query:     1 MELCTAIQTQSAISNHHHPFXXXXXXXXXXXXKSALSLKQTTVS---RSGILYYTNPLPK 57
             MELCT  ++ + I++    F            + +L L++   S   +S  L  +   P 
Sbjct:     1 MELCT--RSTTIITHLPASFNGHGYLAGKSVDRISLPLQRNVASLVLQSRTLRCSRKFPG 58

Query:    58 AT-SEETSSGTDQYVVDKRDGATAAEDVPAVEKNVYNESVATAVPKEESPVDGLTNELLD 116
              T +EETS+G +++ V+ RDG   A    A EKN  +E    A   E+     L  E L+
Sbjct:    59 ETVTEETSTGVNEFGVEDRDGVVVA----AEEKNSNSE----APQAEDEETQAL--EFLN 108

Query:   117 NLKIKFDSEDKYSLVLYXXXXXXXXXXXXXXXXXIDSIPLFPKLMEVVGLGYTLWFSWRY 176
             ++K+  DS+  YS++LY                 +++IPLFPKLMEVVGLGYTLWF+ RY
Sbjct:   109 DIKL--DSDKTYSILLYGSGAIVALYLTSAIVSSLEAIPLFPKLMEVVGLGYTLWFTTRY 166

Query:   177 LLFKKNRDELATKIEELKQQVLGSNDD 203
             LLFK+NR+EL TK+ E+K+QVLGS+ +
Sbjct:   167 LLFKRNREELKTKVSEIKKQVLGSDSE 193

GO:0009507 "chloroplast" evidence=ISM

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

TAIR|locus:2125018 AT4G01150 "AT4G01150" [Arabidopsis thaliana (taxid:3702)]

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 49/109 (44%), Positives = 68/109 (62%)

Query:    94 ESVATAVPKEE-SPVDGLTNELLDNLKIKFDS-EDKYSLVLYXXXXXXXXXXXXXXXXXI 151
             E + T    EE S +D  TNEL+ +LK K+D  E+K ++++Y                 I
Sbjct:    57 ELLKTRASSEETSSID--TNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAI 114

Query:   152 DSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRDELATKIEELKQQVLGS 200
             +S+PL PK+ME+VGLGYT WF +RYLLFK +R ELA  IE LK+++ GS
Sbjct:   115 NSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGS 163

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

TAIR|locus:2044335 PSI-P "photosystem I P subunit" [Arabidopsis thaliana (taxid:3702)]

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 31/119 (26%), Positives = 59/119 (49%)

Query:    87 VEKNVYNESVATAVPKEESPVDGLTNELLDNLKIKFDS----EDKYSLVLYXXXXXXXXX 142
             + +NV   +         +  +  T EL + +K   ++    +DKY++            
Sbjct:    56 IVRNVVTRATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALW 115

Query:   143 XXXXXXXXIDSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRDELATKIEELKQQVLGSN 201
                     ID +PL P ++E+VG+GYT WF+++ L+FK +R+ L  K++   + +LGS+
Sbjct:   116 GSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGSS 174

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0003677 "DNA binding" evidence=ISS

GO:0009941 "chloroplast envelope" evidence=ISS;IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009773 "photosynthetic electron transport in photosystem I" evidence=IDA

GO:0030093 "chloroplast photosystem I" evidence=IMP;IDA

GO:0009295 "nucleoid" evidence=IDA

GO:0009508 "plastid chromosome" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006364 "rRNA processing" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0015979 "photosynthesis" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

TAIR|locus:2037435 AT1G52220 "AT1G52220" [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 28/107 (26%), Positives = 53/107 (49%)

Query:    95 SVATAVPKEESPVDGLTN-ELLDNLKIKFD-SEDKYSLVLYXXXXXXXXXXXXXXXXXID 152
             S++  V       D  T+ +++  ++  +D SED+  L+                   ID
Sbjct:    49 SISLMVKASGESSDSSTDLDVVSTIQNVWDKSEDRLGLIGLGFAGIVALWASLNLITAID 108

Query:   153 SIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRDELATKIEELKQQVLG 199
              +P+     E+VG+ ++ WF++RYLLFK +R EL+  +++    +LG
Sbjct:   109 KLPVISSGFELVGILFSTWFTYRYLLFKPDRQELSKIVKKSVADILG 155


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.129   0.364    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      203       174   0.00075  109 3  11 23  0.48    32
                                                     31  0.49    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  590 (63 KB)
  Total size of DFA:  146 KB (2089 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.73u 0.16s 17.89t   Elapsed:  00:00:01
  Total cpu time:  17.73u 0.16s 17.89t   Elapsed:  00:00:01
  Start:  Thu May  9 16:50:59 2013   End:  Thu May  9 16:51:00 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0006364 "rRNA processing" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00011469001	SubName- Full=Chromosome undetermined scaffold_310, whole genome shotgun sequence; (204 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00027603001	SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (254 aa)			•						0.505
	GSVIVG00002625001	SubName- Full=Chromosome undetermined scaffold_133, whole genome shotgun sequence; (149 aa)			•						0.505
	GSVIVG00007397001	SubName- Full=Chromosome chr16 scaffold_189, whole genome shotgun sequence; (251 aa)			•						0.504
	GSVIVG00004124001	SubName- Full=Chromosome undetermined scaffold_608, whole genome shotgun sequence; (162 aa)			•						0.502
	GSVIVG00035652001	SubName- Full=Chromosome undetermined scaffold_79, whole genome shotgun sequence; (199 aa)			•						0.501
	GSVIVG00020301001	SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (293 aa)			•						0.501
	cemA	RecName- Full=Chloroplast envelope membrane protein;; May be involved in proton extrusion. Indi [...] (226 aa)			•						0.500
	GSVIVG00017320001	SubName- Full=Chromosome chr6 scaffold_15, whole genome shotgun sequence; (94 aa)			•						0.500
	GSVIVG00009465001	SubName- Full=Chromosome undetermined scaffold_235, whole genome shotgun sequence; (234 aa)			•						0.500
	GSVIVG00034898001	SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (285 aa)			•						0.499

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	203
pfam14159	90	pfam14159, DUF4308, Domain of unknown function (DU	9e-34
PLN02777	167	PLN02777, PLN02777, photosystem I P subunit (PSI-P	1e-16

>gnl|CDD|222574 pfam14159, DUF4308, Domain of unknown function (DUF4308)

 Score =  115 bits (290), Expect = 9e-34
 Identities = 45/81 (55%), Positives = 59/81 (72%), Gaps = 4/81 (4%)

Query: 123 DSEDKYSLVLYGTGA----LLALWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLL 178
             EDKY   L G GA    ++ALWL+  V+ AIDSIPL P L+E+VGLGY+ WF +RYLL
Sbjct: 10  KFEDKYKRPLLGVGAIIAVIVALWLSAAVLDAIDSIPLLPGLLELVGLGYSGWFVYRYLL 69

Query: 179 FKKNRDELATKIEELKQQVLG 199
           F ++R EL  KI+ELK+++LG
Sbjct: 70  FSEDRQELLAKIQELKKEILG 90

This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is approximately 90 amino acids in length. The domain is found in several amino-acyl tRNA synthetase enzymes as well as in isolation in single domain proteins. Length = 90

>gnl|CDD|178376 PLN02777, PLN02777, photosystem I P subunit (PSI-P)

 Score = 73.5 bits (180), Expect = 1e-16
 Identities = 36/102 (35%), Positives = 67/102 (65%), Gaps = 4/102 (3%)

Query: 104 ESPVDGLTNELLDNLKIKFDS----EDKYSLVLYGTGALLALWLTTVVVGAIDSIPLFPK 159
           E+P +  T EL + +K   ++    EDKY++       ++ALW +  ++ AID +PL P 
Sbjct: 66  EAPAEVETTELPEIVKTVQEAWDKVEDKYAVSSLAFAGVVALWGSAGMISAIDRLPLVPG 125

Query: 160 LMEVVGLGYTLWFSWRYLLFKKNRDELATKIEELKQQVLGSN 201
           ++E+VG+GYT WF+++ L+FK +R+ L  KI++  ++++GS+
Sbjct: 126 VLELVGIGYTGWFAYKNLVFKPDREALIEKIKDTYKEIIGSS 167

Length = 167

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	203
PLN02777	167	photosystem I P subunit (PSI-P)	100.0
PF14159	90	CAAD: CAAD domains of cyanobacterial aminoacyl-tRN	99.96

>PLN02777 photosystem I P subunit (PSI-P)

Probab=100.00  E-value=3.8e-34  Score=238.56  Aligned_cols=93  Identities=34%  Similarity=0.725  Sum_probs=89.4

Q ss_pred             chhHHHHHHhhhhcc-ccCchhhhhHHHHHHHHHHHHHHHHHHhccCCCcccceeeeeeeeeeeehhhhcccccchHHHH
Q 028840          109 GLTNELLDNLKIKFD-SEDKYSLVLYGTGALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRDELA  187 (203)
Q Consensus       109 ~q~~E~l~~l~~kwd-~edK~av~~~g~gaiVAL~v~~aVL~AID~IPLLp~lLELVGLgYs~WFvyRyLLfke~RqEL~  187 (203)
                      .+..|+++.++++|| .|||+++++++++++|++|++.+||+|||+|||+|++||||||||++||+||||+|+++|+||+
T Consensus        74 ~~~~ei~k~~~e~Wd~~EdK~av~~l~~aaiVal~v~~~VL~AId~lPLlP~lLELVGigYs~WF~yRyLLfke~ReeL~  153 (167)
T PLN02777         74 TELPEIVKTVQEAWDKVEDKYAVSSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFAYKNLVFKPDREALI  153 (167)
T ss_pred             ccHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHhhhhhhhhhhhhHhcCcccHHHHH
Confidence            345799999999999 6999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhhcCCC
Q 028840          188 TKIEELKQQVLGSN  201 (203)
Q Consensus       188 ~kI~~lk~~IlG~~  201 (203)
                      ++|+++|++|+|++
T Consensus       154 ~ki~~lk~~IlG~s  167 (167)
T PLN02777        154 EKIKDTYKEIIGSS  167 (167)
T ss_pred             HHHHHHHHHhhCCC
Confidence            99999999999963

>PF14159 CAAD: CAAD domains of cyanobacterial aminoacyl-tRNA synthetase

Probab=99.96  E-value=4.5e-30  Score=194.44  Aligned_cols=84  Identities=49%  Similarity=0.878  Sum_probs=73.2

Q ss_pred             HHhhhhcc-ccCchhhhhHHH----HHHHHHHHHHHHHHHhccCCCcccceeeeeeeeeeeehhhhcccccchHHHHHHH
Q 028840          116 DNLKIKFD-SEDKYSLVLYGT----GALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRDELATKI  190 (203)
Q Consensus       116 ~~l~~kwd-~edK~av~~~g~----gaiVAL~v~~aVL~AID~IPLLp~lLELVGLgYs~WFvyRyLLfke~RqEL~~kI  190 (203)
                      ++++++|+ ..++|...++++    ++++++|++.+|++|||+|||+|++|||||+||++||+||||+++++||||.+++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~ii~~iv~l~v~~~vl~aIn~iPll~~llElvGlgyt~wF~~ryLL~~~~R~el~~~i   81 (90)
T PF14159_consen    2 SKLPEYWGEFFDKYKRPLLTIGAIIAVIVALWVSAAVLDAINSIPLLPGLLELVGLGYTGWFVYRYLLFAENRQELLQKI   81 (90)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHhHHHHHHHcChHhHHHHHHHH
Confidence            44555565 355555555444    5599999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhcC
Q 028840          191 EELKQQVLG  199 (203)
Q Consensus       191 ~~lk~~IlG  199 (203)
                      +++|++|+|
T Consensus        82 ~~~k~~i~G   90 (90)
T PF14159_consen   82 QSLKKEILG   90 (90)
T ss_pred             HHHHHHhcC
Confidence            999999998

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00