Citrus Sinensis ID: 028842
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 203 | ||||||
| 449440804 | 198 | PREDICTED: uncharacterized endoplasmic r | 0.960 | 0.984 | 0.666 | 6e-75 | |
| 147810457 | 202 | hypothetical protein VITISV_019656 [Viti | 0.990 | 0.995 | 0.676 | 4e-74 | |
| 225457377 | 202 | PREDICTED: uncharacterized endoplasmic r | 0.990 | 0.995 | 0.676 | 8e-74 | |
| 224098898 | 202 | predicted protein [Populus trichocarpa] | 0.965 | 0.970 | 0.665 | 4e-72 | |
| 255562918 | 200 | conserved hypothetical protein [Ricinus | 0.980 | 0.995 | 0.681 | 5e-72 | |
| 297850260 | 206 | hypothetical protein ARALYDRAFT_889295 [ | 0.940 | 0.927 | 0.665 | 2e-70 | |
| 15221258 | 208 | uncharacterized protein [Arabidopsis tha | 0.950 | 0.927 | 0.671 | 6e-70 | |
| 225425640 | 202 | PREDICTED: uncharacterized endoplasmic r | 0.980 | 0.985 | 0.634 | 1e-69 | |
| 296086348 | 201 | unnamed protein product [Vitis vinifera] | 0.980 | 0.990 | 0.634 | 1e-69 | |
| 18394646 | 206 | uncharacterized protein [Arabidopsis tha | 0.940 | 0.927 | 0.660 | 2e-69 |
| >gi|449440804|ref|XP_004138174.1| PREDICTED: uncharacterized endoplasmic reticulum membrane protein C16E8.02-like [Cucumis sativus] gi|449477233|ref|XP_004154967.1| PREDICTED: uncharacterized endoplasmic reticulum membrane protein C16E8.02-like [Cucumis sativus] | Back alignment and taxonomy information |
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Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 134/201 (66%), Positives = 163/201 (81%), Gaps = 6/201 (2%)
Query: 1 MGKSGLLDLEKHFAFYGAYHSNKINVLIHTLFVWPILFSTLMFLHFTPSVCDFSDKVSFL 60
MGK+GL DLEK FAFYGAYHSN +N+ IH LFVWPI F++LM+L+FTPS
Sbjct: 1 MGKTGLFDLEKQFAFYGAYHSNPMNIFIHVLFVWPIFFTSLMYLYFTPSFYTIPKS---- 56
Query: 61 PCGLFGHALVFNLGFLFTLIYASFYYCLDKKAGSLAALLCFACWVGASLLSNRLGFSLAW 120
PCG F H LV N GFLFTL+YA++Y DK+AGS+AALLCF CWVGAS ++N+LG+S W
Sbjct: 57 PCG-FDHGLVLNFGFLFTLMYAAYYVVFDKRAGSMAALLCFVCWVGASFIANKLGYSQTW 115
Query: 121 KVAVAAQLICWTGQFLGHGIFEKRAPALLDNLVQALLMAPFFVLLEVLQ-VFGYEPYPGF 179
KV +AAQL CWT QF+GHG+FEKRAPALLDNL QA LMAPFFV+LEVLQ +F YEPYPGF
Sbjct: 116 KVVLAAQLFCWTNQFIGHGVFEKRAPALLDNLAQAFLMAPFFVVLEVLQSLFKYEPYPGF 175
Query: 180 HANVEAKIRAEIKEWQDKKQK 200
A+V+AKI+A+I+EW++ K+K
Sbjct: 176 SASVQAKIKADIREWKETKEK 196
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147810457|emb|CAN69808.1| hypothetical protein VITISV_019656 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225457377|ref|XP_002284835.1| PREDICTED: uncharacterized endoplasmic reticulum membrane protein C16E8.02-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224098898|ref|XP_002311311.1| predicted protein [Populus trichocarpa] gi|222851131|gb|EEE88678.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|255562918|ref|XP_002522464.1| conserved hypothetical protein [Ricinus communis] gi|223538349|gb|EEF39956.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|297850260|ref|XP_002893011.1| hypothetical protein ARALYDRAFT_889295 [Arabidopsis lyrata subsp. lyrata] gi|297338853|gb|EFH69270.1| hypothetical protein ARALYDRAFT_889295 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|15221258|ref|NP_177584.1| uncharacterized protein [Arabidopsis thaliana] gi|12324798|gb|AAG52360.1|AC011765_12 hypothetical protein; 36691-35528 [Arabidopsis thaliana] gi|332197471|gb|AEE35592.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|225425640|ref|XP_002272016.1| PREDICTED: uncharacterized endoplasmic reticulum membrane protein C16E8.02-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296086348|emb|CBI31937.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|18394646|ref|NP_564061.1| uncharacterized protein [Arabidopsis thaliana] gi|6730712|gb|AAF27107.1|AC011809_16 Unknown protein [Arabidopsis thaliana] gi|15809884|gb|AAL06870.1| At1g18720/F6A14_17 [Arabidopsis thaliana] gi|17978859|gb|AAL47401.1| At1g18720/F6A14_17 [Arabidopsis thaliana] gi|332191631|gb|AEE29752.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 203 | ||||||
| TAIR|locus:2019135 | 208 | AT1G74440 "AT1G74440" [Arabido | 0.965 | 0.942 | 0.671 | 1.6e-70 | |
| TAIR|locus:2034975 | 206 | AT1G18720 "AT1G18720" [Arabido | 0.965 | 0.951 | 0.666 | 4.4e-68 | |
| CGD|CAL0004693 | 192 | orf19.1477 [Candida albicans ( | 0.896 | 0.947 | 0.391 | 1.1e-25 | |
| UNIPROTKB|Q5ALU9 | 192 | CaO19.1477 "Putative uncharact | 0.896 | 0.947 | 0.391 | 1.1e-25 | |
| SGD|S000002978 | 174 | YGL010W "Putative protein of u | 0.600 | 0.701 | 0.346 | 1.5e-24 | |
| POMBASE|SPAC16E8.02 | 222 | SPAC16E8.02 "DUF962 family pro | 0.812 | 0.743 | 0.378 | 6.8e-24 | |
| ASPGD|ASPL0000047597 | 181 | AN1522 [Emericella nidulans (t | 0.862 | 0.966 | 0.371 | 1.6e-22 | |
| UNIPROTKB|Q88AS4 | 174 | PSPTO_0312 "Uncharacterized pr | 0.413 | 0.482 | 0.384 | 2.2e-09 | |
| UNIPROTKB|Q48PY4 | 174 | PSPPH_0230 "Membrane protein, | 0.453 | 0.528 | 0.36 | 2e-08 | |
| UNIPROTKB|Q47UQ5 | 183 | CPS_4828 "Putative uncharacter | 0.748 | 0.830 | 0.309 | 2.3e-06 |
| TAIR|locus:2019135 AT1G74440 "AT1G74440" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
Identities = 133/198 (67%), Positives = 162/198 (81%)
Query: 5 GLLDLEKHFAFYGAYHSNKINVLIHTLFVWPILFSTLMFLHFTPSVCDFSDKVSFLPCGL 64
GLLDLEKHFAFYGAYHSN IN++IHTLFVWP +F+TL+FL+ TP + D S ++ FL
Sbjct: 6 GLLDLEKHFAFYGAYHSNPINIIIHTLFVWPNVFATLLFLYSTPPILDHS-QLGFLKSLT 64
Query: 65 FGHALVFNLGFLFTLIYASFYYCLDKKAGSLAALLCFACWVGASLLSNRLGFSLAWKVAV 124
F L ++GF T+ YA FY CLDKK+G LAALLCF+CW+G+S L+ RLG SL KV V
Sbjct: 65 FDGVLRLDIGFTLTVTYAVFYICLDKKSGVLAALLCFSCWIGSSFLAARLGHSLTLKVGV 124
Query: 125 AAQLICWTGQFLGHGIFEKRAPALLDNLVQALLMAPFFVLLEVLQ-VFGYEPYPGFHANV 183
A+QL+CWTGQFLGHG+FEKRAPALLDNL+QA LM PFFVLLEVLQ VFGYEPYPGF A V
Sbjct: 125 ASQLLCWTGQFLGHGLFEKRAPALLDNLLQAFLMGPFFVLLEVLQSVFGYEPYPGFKARV 184
Query: 184 EAKIRAEIKEWQDKKQKK 201
++KI + IKEW++KK+++
Sbjct: 185 DSKIESGIKEWREKKKQQ 202
|
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| TAIR|locus:2034975 AT1G18720 "AT1G18720" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| CGD|CAL0004693 orf19.1477 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5ALU9 CaO19.1477 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
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| SGD|S000002978 YGL010W "Putative protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
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| POMBASE|SPAC16E8.02 SPAC16E8.02 "DUF962 family protein" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000047597 AN1522 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q88AS4 PSPTO_0312 "Uncharacterized protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q48PY4 PSPPH_0230 "Membrane protein, putative" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q47UQ5 CPS_4828 "Putative uncharacterized protein" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| estExt_Genewise1_v1.C_LG_VIII1964 | hypothetical protein (203 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 203 | |||
| COG4539 | 180 | COG4539, COG4539, Predicted membrane protein [Func | 1e-31 | |
| pfam06127 | 95 | pfam06127, DUF962, Protein of unknown function (DU | 9e-12 | |
| pfam06127 | 95 | pfam06127, DUF962, Protein of unknown function (DU | 2e-06 |
| >gnl|CDD|226914 COG4539, COG4539, Predicted membrane protein [Function unknown] | Back alignment and domain information |
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Score = 112 bits (283), Expect = 1e-31
Identities = 64/185 (34%), Positives = 91/185 (49%), Gaps = 18/185 (9%)
Query: 6 LLDLEKHFAFYGAYHSNKINVLIHTLFVWPILFSTLMFLHFTPSVCDFSDKVSFLPCGLF 65
+LDL H +FY AYH N N+LIH + + IL S + LH + L
Sbjct: 1 MLDLSDHLSFYAAYHHNPRNILIHFIGIPTILLSGAVLLH--------RPVIGLSNSKL- 51
Query: 66 GHALVFNLGFLFTLIYASFYYCLDKKAGSLA-ALLCFACWVGASLLSNRLGFSLAWKVAV 124
+ L ++ ++ FY LD G L LL W+ +L ++R L + +
Sbjct: 52 ----QISPALLLSVAFSIFYLRLDLPFGLLMGVLLLLLVWILLALAAHRTDAWLKQGLGL 107
Query: 125 AAQLICWTGQFLGHGIFEKRAPALLDNLVQALLMAPFFVLLEVLQVFGYEPYPGFHANVE 184
+I W QF+GHG+FEKR PAL+DNLVQ+L++AP F+L E L G P A VE
Sbjct: 108 F--VIGWIFQFVGHGVFEKRKPALVDNLVQSLVIAPLFILAETLFKLGL--RPRLKAEVE 163
Query: 185 AKIRA 189
+
Sbjct: 164 HRAEI 168
|
Length = 180 |
| >gnl|CDD|191456 pfam06127, DUF962, Protein of unknown function (DUF962) | Back alignment and domain information |
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| >gnl|CDD|191456 pfam06127, DUF962, Protein of unknown function (DUF962) | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 203 | |||
| KOG3292 | 196 | consensus Predicted membrane protein [Function unk | 100.0 | |
| COG4539 | 180 | Predicted membrane protein [Function unknown] | 100.0 | |
| PF06127 | 95 | DUF962: Protein of unknown function (DUF962); Inte | 99.97 | |
| COG4323 | 105 | Predicted membrane protein [Function unknown] | 97.11 | |
| PF08285 | 91 | DPM3: Dolichol-phosphate mannosyltransferase subun | 80.86 |
| >KOG3292 consensus Predicted membrane protein [Function unknown] | Back alignment and domain information |
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Probab=100.00 E-value=1.2e-55 Score=357.60 Aligned_cols=188 Identities=63% Similarity=1.119 Sum_probs=171.0
Q ss_pred CCCCCCCCHHHHHHHHhhhhcCccchhhhhhhhhHHHHHHHHHhhcCCCccccCcccccCccccccccccccHHHHHHHH
Q 028842 1 MGKSGLLDLEKHFAFYGAYHSNKINVLIHTLFVWPILFSTLMFLHFTPSVCDFSDKVSFLPCGLFGHALVFNLGFLFTLI 80 (203)
Q Consensus 1 m~~~~~f~L~~~l~~Y~~yH~N~~N~~IH~v~VP~I~~s~l~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~n~a~i~~~~ 80 (203)
||.. .+|||++++||++||+||+|+.||.+|||+|+||.++++.++.....+ ...+...+|.++++.+.
T Consensus 1 Ms~~-l~dL~k~~aFY~aYHsNPiNIlIH~ifvp~ilfs~l~lLh~l~f~qsl----------tl~~vLr~nv~~~~~v~ 69 (196)
T KOG3292|consen 1 MSEG-LLDLEKHFAFYGAYHSNPINILIHSIFVPPILFSGLLLLHSLGFYQSL----------TLDGVLRINVGFLVSVL 69 (196)
T ss_pred CCch-hhhHHHhhhHHHHhccCCceEEEEeeehhHHHHHHHHHHHhcCceEEE----------EeeeEEEeehHHHHHHH
Confidence 5544 789999999999999999999999999999999999999988763221 11234678999999999
Q ss_pred HHHHHHhhchhhhHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHhhhccccCCCCcchhhHHHHHHHHH
Q 028842 81 YASFYYCLDKKAGSLAALLCFACWVGASLLSNRLGFSLAWKVAVAAQLICWTGQFLGHGIFEKRAPALLDNLVQALLMAP 160 (203)
Q Consensus 81 ~~~yY~~Ld~~~g~l~~~~~~~~~~~~~~l~~~~~~~~~~~~al~v~vv~Wi~QFiGH~vfEgrkPalldnl~q~l~igP 160 (203)
|++||+.||++-|++.+.++..||.....++.+.+.+...+++++.+++||++||+|||+|||||||++||++|++++||
T Consensus 70 yaiFYi~Ld~~sGlla~vl~l~~~i~~s~l~~r~~~sl~~k~g~~s~licWi~QFvGHGvFEKR~PALlDNLlQsl~maP 149 (196)
T KOG3292|consen 70 YAIFYILLDKKSGLLAAVLCLSCWIGSSFLAHRLGLSLKLKVGLASQLICWIGQFVGHGVFEKRAPALLDNLLQSLLMAP 149 (196)
T ss_pred HHHHheeecccccHHHHHHHHHHHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHhH
Confidence 99999999999998888888889999999988877566778899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCccchHHHHHHHHHHHHHHHHhhc
Q 028842 161 FFVLLEVLQVFGYEPYPGFHANVEAKIRAEIKEWQDKKQ 199 (203)
Q Consensus 161 lfV~~e~lf~lG~~p~~~l~~~v~~~i~~~i~~~~~~~~ 199 (203)
+|++.|+++.+||+|||.+++|++.+++..++++|++|+
T Consensus 150 ~Fv~lE~l~~~Gy~P~~~~kar~n~kle~~~kn~r~~k~ 188 (196)
T KOG3292|consen 150 FFVLLEVLSVFGYEPYPGFKARVNHKLESKIKNYRMKKE 188 (196)
T ss_pred HHHHHHHHHHccCCcCcchhheehhhHhHHHhhHHhhhh
Confidence 999999999999999999999999999999999998883
|
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| >COG4539 Predicted membrane protein [Function unknown] | Back alignment and domain information |
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| >PF06127 DUF962: Protein of unknown function (DUF962); InterPro: IPR009305 This family consists of several eukaryotic and prokaryotic proteins of unknown function | Back alignment and domain information |
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| >COG4323 Predicted membrane protein [Function unknown] | Back alignment and domain information |
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| >PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00