Citrus Sinensis ID: 028842


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200---
MGKSGLLDLEKHFAFYGAYHSNKINVLIHTLFVWPILFSTLMFLHFTPSVCDFSDKVSFLPCGLFGHALVFNLGFLFTLIYASFYYCLDKKAGSLAALLCFACWVGASLLSNRLGFSLAWKVAVAAQLICWTGQFLGHGIFEKRAPALLDNLVQALLMAPFFVLLEVLQVFGYEPYPGFHANVEAKIRAEIKEWQDKKQKKIS
ccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccc
cccccHccHHHHHHHHHHHccccccEEEEEHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcc
MGKSGLLDLEKHFAFYGAYHSNKINVLIHTLFVWPILFSTLmflhftpsvcdfsdkvsflpcglfgHALVFNLGFLFTLIYASFYYCLDKKAGSLAALLCFACWVGASLLSNRLGFSLAWKVAVAAQLICWTgqflghgifekRAPALLDNLVQALLMAPFFVLLEVLQvfgyepypgfhaNVEAKIRAEIKEWQDKKQKKIS
MGKSGLLDLEKHFAFYGAYHSNKINVLIHTLFVWPILFSTLMFLHFTPSVCDFSDKVSFLPCGLFGHALVFNLGFLFTLIYASFYYCLDKKAGSLAALLCFACWVGASLLSNRLGFSLAWKVAVAAQLICWTGQFLGHGIFEKRAPALLDNLVQALLMAPFFVLLEVLQVFGYEPYPGFHANVEAKIRAEIKewqdkkqkkis
MGKSGLLDLEKHFAFYGAYHSNKINVLIHTLFVWPILFSTLMFLHFTPSVCDFSDKVSFLPCGLFGHALVFNLGFLFTLIYASFYYCLDKKAGSLAALLCFACWVGASLLSNRLGFSLAWKVAVAAQLICWTGQFLGHGIFEKRAPALLDNLVQALLMAPFFVLLEVLQVFGYEPYPGFHANVEAKIRAEIKEWQDKKQKKIS
*****LLDLEKHFAFYGAYHSNKINVLIHTLFVWPILFSTLMFLHFTPSVCDFSDKVSFLPCGLFGHALVFNLGFLFTLIYASFYYCLDKKAGSLAALLCFACWVGASLLSNRLGFSLAWKVAVAAQLICWTGQFLGHGIFEKRAPALLDNLVQALLMAPFFVLLEVLQVFGYEPYPGFHANVEAKIRAEIK***********
****GLLDLEKHFAFYGAYHSNKINVLIHTLFVWPILFSTLMFLHFTPSVCDFSDKVSFLPCGLFGHALVFNLGFLFTLIYASFYYCLDKKAGSLAALLCFACWVGASLLSNRLGFSLAWKVAVAAQLICWTGQFLGHGIFEKRAPALLDNLVQALLMAPFFVLLEVLQVFGYEPYPGFHANVE*******************
MGKSGLLDLEKHFAFYGAYHSNKINVLIHTLFVWPILFSTLMFLHFTPSVCDFSDKVSFLPCGLFGHALVFNLGFLFTLIYASFYYCLDKKAGSLAALLCFACWVGASLLSNRLGFSLAWKVAVAAQLICWTGQFLGHGIFEKRAPALLDNLVQALLMAPFFVLLEVLQVFGYEPYPGFHANVEAKIRAEIKE**********
****GLLDLEKHFAFYGAYHSNKINVLIHTLFVWPILFSTLMFLHFTPSVCDFSDKVSFLPCGLFGHALVFNLGFLFTLIYASFYYCLDKKAGSLAALLCFACWVGASLLSNRLGFSLAWKVAVAAQLICWTGQFLGHGIFEKRAPALLDNLVQALLMAPFFVLLEVLQVFGYEPYPGFHANVEAKIRAEIKEWQDKKQ****
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooo
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MGKSGLLDLEKHFAFYGAYHSNKINVLIHTLFVWPILFSTLMFLHFTPSVCDFSDKVSFLPCGLFGHALVFNLGFLFTLIYASFYYCLDKKAGSLAALLCFACWVGASLLSNRLGFSLAWKVAVAAQLICWTGQFLGHGIFEKRAPALLDNLVQALLMAPFFVLLEVLQVFGYEPYPGFHANVEAKIRAEIKEWQDKKQKKIS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query203 2.2.26 [Sep-21-2011]
O13737222 Uncharacterized endoplasm yes no 0.812 0.743 0.372 4e-22
P25338174 Uncharacterized endoplasm yes no 0.857 1.0 0.343 3e-18
>sp|O13737|YDR2_SCHPO Uncharacterized endoplasmic reticulum membrane protein C16E8.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC16E8.02 PE=4 SV=2 Back     alignment and function desciption
 Score =  104 bits (259), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 98/185 (52%), Gaps = 20/185 (10%)

Query: 9   LEKHFAFYGAYHSNKINVLIHTLFVWPILFSTLMFLHFTPSVCDFSDKVSFLPCGLFGHA 68
           L + ++FY AYHSN +N+ IH + +  +L + L+ LH            +F+   L    
Sbjct: 4   LSRSYSFYAAYHSNPVNIKIHQVCIPLLLLTALVLLH------------NFV-ITLINSK 50

Query: 69  LVFNLGFLFTLIYASFYYCLDKKAGSL-AALLCFACWVGASLLSNRLGFSLAWKVAVAAQ 127
           L  N+  L  L Y  FY  LD   G L + +L    ++  S L      SL  + A    
Sbjct: 51  LQINVAHLVGLAYQIFYVTLDPLDGLLYSPVLYLFSYILPSKLFTIFSRSLVNRSAAVVH 110

Query: 128 LICWTGQFLGHGIFEKRAPALLDNLVQALLMAPFFVLLEVLQVFGYEPYPGFHANVEAKI 187
           +ICW  QF+GHG+FEKR PALLDNL+Q+L +AP F  LE        P+ G++ +V +KI
Sbjct: 111 VICWILQFIGHGVFEKRKPALLDNLIQSLFIAPLFAFLET------GPFVGYYPSVVSKI 164

Query: 188 RAEIK 192
           RA IK
Sbjct: 165 RANIK 169





Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
>sp|P25338|YGB0_YEAST Uncharacterized endoplasmic reticulum membrane protein YGL010W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGL010W PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query203
449440804198 PREDICTED: uncharacterized endoplasmic r 0.960 0.984 0.666 6e-75
147810457202 hypothetical protein VITISV_019656 [Viti 0.990 0.995 0.676 4e-74
225457377202 PREDICTED: uncharacterized endoplasmic r 0.990 0.995 0.676 8e-74
224098898202 predicted protein [Populus trichocarpa] 0.965 0.970 0.665 4e-72
255562918200 conserved hypothetical protein [Ricinus 0.980 0.995 0.681 5e-72
297850260206 hypothetical protein ARALYDRAFT_889295 [ 0.940 0.927 0.665 2e-70
15221258208 uncharacterized protein [Arabidopsis tha 0.950 0.927 0.671 6e-70
225425640202 PREDICTED: uncharacterized endoplasmic r 0.980 0.985 0.634 1e-69
296086348201 unnamed protein product [Vitis vinifera] 0.980 0.990 0.634 1e-69
18394646206 uncharacterized protein [Arabidopsis tha 0.940 0.927 0.660 2e-69
>gi|449440804|ref|XP_004138174.1| PREDICTED: uncharacterized endoplasmic reticulum membrane protein C16E8.02-like [Cucumis sativus] gi|449477233|ref|XP_004154967.1| PREDICTED: uncharacterized endoplasmic reticulum membrane protein C16E8.02-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  285 bits (730), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 134/201 (66%), Positives = 163/201 (81%), Gaps = 6/201 (2%)

Query: 1   MGKSGLLDLEKHFAFYGAYHSNKINVLIHTLFVWPILFSTLMFLHFTPSVCDFSDKVSFL 60
           MGK+GL DLEK FAFYGAYHSN +N+ IH LFVWPI F++LM+L+FTPS           
Sbjct: 1   MGKTGLFDLEKQFAFYGAYHSNPMNIFIHVLFVWPIFFTSLMYLYFTPSFYTIPKS---- 56

Query: 61  PCGLFGHALVFNLGFLFTLIYASFYYCLDKKAGSLAALLCFACWVGASLLSNRLGFSLAW 120
           PCG F H LV N GFLFTL+YA++Y   DK+AGS+AALLCF CWVGAS ++N+LG+S  W
Sbjct: 57  PCG-FDHGLVLNFGFLFTLMYAAYYVVFDKRAGSMAALLCFVCWVGASFIANKLGYSQTW 115

Query: 121 KVAVAAQLICWTGQFLGHGIFEKRAPALLDNLVQALLMAPFFVLLEVLQ-VFGYEPYPGF 179
           KV +AAQL CWT QF+GHG+FEKRAPALLDNL QA LMAPFFV+LEVLQ +F YEPYPGF
Sbjct: 116 KVVLAAQLFCWTNQFIGHGVFEKRAPALLDNLAQAFLMAPFFVVLEVLQSLFKYEPYPGF 175

Query: 180 HANVEAKIRAEIKEWQDKKQK 200
            A+V+AKI+A+I+EW++ K+K
Sbjct: 176 SASVQAKIKADIREWKETKEK 196




Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147810457|emb|CAN69808.1| hypothetical protein VITISV_019656 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225457377|ref|XP_002284835.1| PREDICTED: uncharacterized endoplasmic reticulum membrane protein C16E8.02-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224098898|ref|XP_002311311.1| predicted protein [Populus trichocarpa] gi|222851131|gb|EEE88678.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255562918|ref|XP_002522464.1| conserved hypothetical protein [Ricinus communis] gi|223538349|gb|EEF39956.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|297850260|ref|XP_002893011.1| hypothetical protein ARALYDRAFT_889295 [Arabidopsis lyrata subsp. lyrata] gi|297338853|gb|EFH69270.1| hypothetical protein ARALYDRAFT_889295 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15221258|ref|NP_177584.1| uncharacterized protein [Arabidopsis thaliana] gi|12324798|gb|AAG52360.1|AC011765_12 hypothetical protein; 36691-35528 [Arabidopsis thaliana] gi|332197471|gb|AEE35592.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|225425640|ref|XP_002272016.1| PREDICTED: uncharacterized endoplasmic reticulum membrane protein C16E8.02-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296086348|emb|CBI31937.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|18394646|ref|NP_564061.1| uncharacterized protein [Arabidopsis thaliana] gi|6730712|gb|AAF27107.1|AC011809_16 Unknown protein [Arabidopsis thaliana] gi|15809884|gb|AAL06870.1| At1g18720/F6A14_17 [Arabidopsis thaliana] gi|17978859|gb|AAL47401.1| At1g18720/F6A14_17 [Arabidopsis thaliana] gi|332191631|gb|AEE29752.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query203
TAIR|locus:2019135208 AT1G74440 "AT1G74440" [Arabido 0.965 0.942 0.671 1.6e-70
TAIR|locus:2034975206 AT1G18720 "AT1G18720" [Arabido 0.965 0.951 0.666 4.4e-68
CGD|CAL0004693192 orf19.1477 [Candida albicans ( 0.896 0.947 0.391 1.1e-25
UNIPROTKB|Q5ALU9192 CaO19.1477 "Putative uncharact 0.896 0.947 0.391 1.1e-25
SGD|S000002978174 YGL010W "Putative protein of u 0.600 0.701 0.346 1.5e-24
POMBASE|SPAC16E8.02222 SPAC16E8.02 "DUF962 family pro 0.812 0.743 0.378 6.8e-24
ASPGD|ASPL0000047597181 AN1522 [Emericella nidulans (t 0.862 0.966 0.371 1.6e-22
UNIPROTKB|Q88AS4174 PSPTO_0312 "Uncharacterized pr 0.413 0.482 0.384 2.2e-09
UNIPROTKB|Q48PY4174 PSPPH_0230 "Membrane protein, 0.453 0.528 0.36 2e-08
UNIPROTKB|Q47UQ5183 CPS_4828 "Putative uncharacter 0.748 0.830 0.309 2.3e-06
TAIR|locus:2019135 AT1G74440 "AT1G74440" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
 Identities = 133/198 (67%), Positives = 162/198 (81%)

Query:     5 GLLDLEKHFAFYGAYHSNKINVLIHTLFVWPILFSTLMFLHFTPSVCDFSDKVSFLPCGL 64
             GLLDLEKHFAFYGAYHSN IN++IHTLFVWP +F+TL+FL+ TP + D S ++ FL    
Sbjct:     6 GLLDLEKHFAFYGAYHSNPINIIIHTLFVWPNVFATLLFLYSTPPILDHS-QLGFLKSLT 64

Query:    65 FGHALVFNLGFLFTLIYASFYYCLDKKAGSLAALLCFACWVGASLLSNRLGFSLAWKVAV 124
             F   L  ++GF  T+ YA FY CLDKK+G LAALLCF+CW+G+S L+ RLG SL  KV V
Sbjct:    65 FDGVLRLDIGFTLTVTYAVFYICLDKKSGVLAALLCFSCWIGSSFLAARLGHSLTLKVGV 124

Query:   125 AAQLICWTGQFLGHGIFEKRAPALLDNLVQALLMAPFFVLLEVLQ-VFGYEPYPGFHANV 183
             A+QL+CWTGQFLGHG+FEKRAPALLDNL+QA LM PFFVLLEVLQ VFGYEPYPGF A V
Sbjct:   125 ASQLLCWTGQFLGHGLFEKRAPALLDNLLQAFLMGPFFVLLEVLQSVFGYEPYPGFKARV 184

Query:   184 EAKIRAEIKEWQDKKQKK 201
             ++KI + IKEW++KK+++
Sbjct:   185 DSKIESGIKEWREKKKQQ 202




GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
GO:0009507 "chloroplast" evidence=ISM
GO:0009627 "systemic acquired resistance" evidence=RCA
GO:0031347 "regulation of defense response" evidence=RCA
TAIR|locus:2034975 AT1G18720 "AT1G18720" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
CGD|CAL0004693 orf19.1477 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ALU9 CaO19.1477 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
SGD|S000002978 YGL010W "Putative protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
POMBASE|SPAC16E8.02 SPAC16E8.02 "DUF962 family protein" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
ASPGD|ASPL0000047597 AN1522 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|Q88AS4 PSPTO_0312 "Uncharacterized protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] Back     alignment and assigned GO terms
UNIPROTKB|Q48PY4 PSPPH_0230 "Membrane protein, putative" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] Back     alignment and assigned GO terms
UNIPROTKB|Q47UQ5 CPS_4828 "Putative uncharacterized protein" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P25338YGB0_YEASTNo assigned EC number0.34320.85711.0yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
estExt_Genewise1_v1.C_LG_VIII1964
hypothetical protein (203 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query203
COG4539180 COG4539, COG4539, Predicted membrane protein [Func 1e-31
pfam0612795 pfam06127, DUF962, Protein of unknown function (DU 9e-12
pfam0612795 pfam06127, DUF962, Protein of unknown function (DU 2e-06
>gnl|CDD|226914 COG4539, COG4539, Predicted membrane protein [Function unknown] Back     alignment and domain information
 Score =  112 bits (283), Expect = 1e-31
 Identities = 64/185 (34%), Positives = 91/185 (49%), Gaps = 18/185 (9%)

Query: 6   LLDLEKHFAFYGAYHSNKINVLIHTLFVWPILFSTLMFLHFTPSVCDFSDKVSFLPCGLF 65
           +LDL  H +FY AYH N  N+LIH + +  IL S  + LH           +      L 
Sbjct: 1   MLDLSDHLSFYAAYHHNPRNILIHFIGIPTILLSGAVLLH--------RPVIGLSNSKL- 51

Query: 66  GHALVFNLGFLFTLIYASFYYCLDKKAGSLA-ALLCFACWVGASLLSNRLGFSLAWKVAV 124
                 +   L ++ ++ FY  LD   G L   LL    W+  +L ++R    L   + +
Sbjct: 52  ----QISPALLLSVAFSIFYLRLDLPFGLLMGVLLLLLVWILLALAAHRTDAWLKQGLGL 107

Query: 125 AAQLICWTGQFLGHGIFEKRAPALLDNLVQALLMAPFFVLLEVLQVFGYEPYPGFHANVE 184
              +I W  QF+GHG+FEKR PAL+DNLVQ+L++AP F+L E L   G    P   A VE
Sbjct: 108 F--VIGWIFQFVGHGVFEKRKPALVDNLVQSLVIAPLFILAETLFKLGL--RPRLKAEVE 163

Query: 185 AKIRA 189
            +   
Sbjct: 164 HRAEI 168


Length = 180

>gnl|CDD|191456 pfam06127, DUF962, Protein of unknown function (DUF962) Back     alignment and domain information
>gnl|CDD|191456 pfam06127, DUF962, Protein of unknown function (DUF962) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 203
KOG3292196 consensus Predicted membrane protein [Function unk 100.0
COG4539180 Predicted membrane protein [Function unknown] 100.0
PF0612795 DUF962: Protein of unknown function (DUF962); Inte 99.97
COG4323105 Predicted membrane protein [Function unknown] 97.11
PF0828591 DPM3: Dolichol-phosphate mannosyltransferase subun 80.86
>KOG3292 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
Probab=100.00  E-value=1.2e-55  Score=357.60  Aligned_cols=188  Identities=63%  Similarity=1.119  Sum_probs=171.0

Q ss_pred             CCCCCCCCHHHHHHHHhhhhcCccchhhhhhhhhHHHHHHHHHhhcCCCccccCcccccCccccccccccccHHHHHHHH
Q 028842            1 MGKSGLLDLEKHFAFYGAYHSNKINVLIHTLFVWPILFSTLMFLHFTPSVCDFSDKVSFLPCGLFGHALVFNLGFLFTLI   80 (203)
Q Consensus         1 m~~~~~f~L~~~l~~Y~~yH~N~~N~~IH~v~VP~I~~s~l~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~n~a~i~~~~   80 (203)
                      ||.. .+|||++++||++||+||+|+.||.+|||+|+||.++++.++.....+          ...+...+|.++++.+.
T Consensus         1 Ms~~-l~dL~k~~aFY~aYHsNPiNIlIH~ifvp~ilfs~l~lLh~l~f~qsl----------tl~~vLr~nv~~~~~v~   69 (196)
T KOG3292|consen    1 MSEG-LLDLEKHFAFYGAYHSNPINILIHSIFVPPILFSGLLLLHSLGFYQSL----------TLDGVLRINVGFLVSVL   69 (196)
T ss_pred             CCch-hhhHHHhhhHHHHhccCCceEEEEeeehhHHHHHHHHHHHhcCceEEE----------EeeeEEEeehHHHHHHH
Confidence            5544 789999999999999999999999999999999999999988763221          11234678999999999


Q ss_pred             HHHHHHhhchhhhHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHhhhccccCCCCcchhhHHHHHHHHH
Q 028842           81 YASFYYCLDKKAGSLAALLCFACWVGASLLSNRLGFSLAWKVAVAAQLICWTGQFLGHGIFEKRAPALLDNLVQALLMAP  160 (203)
Q Consensus        81 ~~~yY~~Ld~~~g~l~~~~~~~~~~~~~~l~~~~~~~~~~~~al~v~vv~Wi~QFiGH~vfEgrkPalldnl~q~l~igP  160 (203)
                      |++||+.||++-|++.+.++..||.....++.+.+.+...+++++.+++||++||+|||+|||||||++||++|++++||
T Consensus        70 yaiFYi~Ld~~sGlla~vl~l~~~i~~s~l~~r~~~sl~~k~g~~s~licWi~QFvGHGvFEKR~PALlDNLlQsl~maP  149 (196)
T KOG3292|consen   70 YAIFYILLDKKSGLLAAVLCLSCWIGSSFLAHRLGLSLKLKVGLASQLICWIGQFVGHGVFEKRAPALLDNLLQSLLMAP  149 (196)
T ss_pred             HHHHheeecccccHHHHHHHHHHHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHhH
Confidence            99999999999998888888889999999988877566778899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCCccchHHHHHHHHHHHHHHHHhhc
Q 028842          161 FFVLLEVLQVFGYEPYPGFHANVEAKIRAEIKEWQDKKQ  199 (203)
Q Consensus       161 lfV~~e~lf~lG~~p~~~l~~~v~~~i~~~i~~~~~~~~  199 (203)
                      +|++.|+++.+||+|||.+++|++.+++..++++|++|+
T Consensus       150 ~Fv~lE~l~~~Gy~P~~~~kar~n~kle~~~kn~r~~k~  188 (196)
T KOG3292|consen  150 FFVLLEVLSVFGYEPYPGFKARVNHKLESKIKNYRMKKE  188 (196)
T ss_pred             HHHHHHHHHHccCCcCcchhheehhhHhHHHhhHHhhhh
Confidence            999999999999999999999999999999999998883



>COG4539 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF06127 DUF962: Protein of unknown function (DUF962); InterPro: IPR009305 This family consists of several eukaryotic and prokaryotic proteins of unknown function Back     alignment and domain information
>COG4323 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00