Citrus Sinensis ID: 029288

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190------
Protein Sequence
MFQSTDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDYYVQ
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHHccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccEEEEHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHEHHcccccccccccccccccEEccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccEEccccccHEcc
Coil and Loop (DISEMBL)
MFQSTDFLIYVAATVSVVLALVLHfeprcgqtnILVYLGICSLMGSLTVVSIKAIGIAIKLTLDgisqiaypqTWFFLTVAAVCVVTQLNYLNKALDTfnaaivspVYYVMFTTLTIIASAIMfkdwsgqdvsgiASEICGFITVLSGTIILHAtreheqttapvgtvtwyvsgdslkgaeeehlitihnsdyyvq
Flexible Loop (DISEMBL)
mfqstdflIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATreheqttapvgtvTWYVSGDSLkgaeeehlitihnsdyyvq
Low Complexity Region (SEG)
MFQSTDFLIYvaatvsvvlalvlHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDYYVQ
Disordered region (IsUnstruct)
*****DFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDY***
Disordered Region (DISOPRED)
MFQSTDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILH*******************************************
Disordered Region (DISEMBL)
MFQSTDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDYYVQ
Disordered Region (DISPRO)
*FQSTDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREH***TAPVGTVT************EEHLITIHNSDYYVQ
Transmembrane Helix (TMHMM)
ooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MFQSTDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDYYVQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	196	2.2.26 [Sep-21-2011]
Q8BMW7	416	Magnesium transporter NIP	yes	no	0.882	0.415	0.410	2e-32
Q3SWX0	360	Magnesium transporter NIP	yes	no	0.75	0.408	0.476	2e-32
Q5R7Q3	360	Magnesium transporter NIP	yes	no	0.75	0.408	0.469	2e-32
Q8N8Q9	360	Magnesium transporter NIP	no	no	0.75	0.408	0.469	2e-32
Q9JJC8	359	Magnesium transporter NIP	no	no	0.75	0.409	0.469	2e-32
Q5RDB8	410	Magnesium transporter NIP	no	no	0.816	0.390	0.412	9e-29
Q6NVV3	410	Magnesium transporter NIP	no	no	0.816	0.390	0.406	2e-28
Q0D2K0	466	Magnesium transporter NIP	no	no	0.821	0.345	0.360	4e-27
Q8BZF2	406	Magnesium transporter NIP	no	no	0.826	0.399	0.335	6e-27
Q7RTP0	329	Magnesium transporter NIP	no	no	0.770	0.458	0.379	1e-19

>sp|Q8BMW7|NIPA3_MOUSE Magnesium transporter NIPA3 OS=Mus musculus GN=Nipal1 PE=1 SV=2

 Score =  139 bits (349), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/185 (41%), Positives = 113/185 (61%), Gaps = 12/185 (6%)

Query: 12  AATVSVV-LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIA 70
           A  +SV+ L L+L   P+ GQTNILVY+ ICSL+G+ +V S+K +GIAIK  L+      
Sbjct: 213 AVIISVISLVLILIVAPKKGQTNILVYIAICSLIGAFSVSSVKGLGIAIKELLERKPVYK 272

Query: 71  YPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQ 130
            P  +  LT+ A+ V TQ+NYLNKALDTFN ++V+P+YYV FT++ +  SAI+F++W G 
Sbjct: 273 DPLFFILLTMLALSVTTQINYLNKALDTFNTSLVTPIYYVFFTSMVVTCSAILFQEWYGM 332

Query: 131 DVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHN 190
               I   + GF T+++G  +LHA +           +TW    + +  A++E L    N
Sbjct: 333 KAGDIIGTLSGFFTIINGIFLLHAFKNTN--------ITW---SELMSTAKKEALSPNGN 381

Query: 191 SDYYV 195
            + YV
Sbjct: 382 QNSYV 386

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).
Mus musculus (taxid: 10090)

>sp|Q3SWX0|NIPA2_BOVIN Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1

 Score =  139 bits (349), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/149 (47%), Positives = 99/149 (66%), Gaps = 2/149 (1%)

Query: 11  VAATVSVVLALVLHF--EPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQ 68
           V AT+ V+++L+L F   PR GQTNILVY+ ICS++G+++V   K +GIAIK    G   
Sbjct: 153 VFATLVVIVSLILIFVVGPRHGQTNILVYITICSVIGAVSVSCAKGLGIAIKELFAGKPV 212

Query: 69  IAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWS 128
           + +P TW  L    VCV TQ+NYLN+ALD FN +IV+P+YYV FTT  I  SAI+FK+W 
Sbjct: 213 LQHPLTWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVITCSAILFKEWQ 272

Query: 129 GQDVSGIASEICGFITVLSGTIILHATRE 157
              V  +   + GF T++ G  +LHA ++
Sbjct: 273 DMPVDDVIGTLSGFFTIIVGIFLLHAFKD 301

Acts as a selective Mg(2+) transporter.

Bos taurus (taxid: 9913)

>sp|Q5R7Q3|NIPA2_PONAB Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1

 Score =  139 bits (349), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/149 (46%), Positives = 98/149 (65%), Gaps = 2/149 (1%)

Query: 11  VAATVSVVLALVLHF--EPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQ 68
           V AT+ V++AL+L F   PR GQTNILVY+ ICS++G+ +V  +K +GIAIK    G   
Sbjct: 153 VFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELFAGKPV 212

Query: 69  IAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWS 128
           + +P  W  L    VCV TQ+NYLN+ALD FN +IV+P+YYV FTT  +  SAI+FK+W 
Sbjct: 213 LRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQ 272

Query: 129 GQDVSGIASEICGFITVLSGTIILHATRE 157
              V  +   + GF T++ G  +LHA ++
Sbjct: 273 DMPVDDVIGTLSGFFTIIVGIFLLHAFKD 301

Acts as a selective Mg(2+) transporter.

Pongo abelii (taxid: 9601)

>sp|Q8N8Q9|NIPA2_HUMAN Magnesium transporter NIPA2 OS=Homo sapiens GN=NIPA2 PE=2 SV=1

 Score =  139 bits (349), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/149 (46%), Positives = 98/149 (65%), Gaps = 2/149 (1%)

Query: 11  VAATVSVVLALVLHF--EPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQ 68
           V AT+ V++AL+L F   PR GQTNILVY+ ICS++G+ +V  +K +GIAIK    G   
Sbjct: 153 VFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELFAGKPV 212

Query: 69  IAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWS 128
           + +P  W  L    VCV TQ+NYLN+ALD FN +IV+P+YYV FTT  +  SAI+FK+W 
Sbjct: 213 LRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQ 272

Query: 129 GQDVSGIASEICGFITVLSGTIILHATRE 157
              V  +   + GF T++ G  +LHA ++
Sbjct: 273 DMPVDDVIGTLSGFFTIIVGIFLLHAFKD 301

Acts as a selective Mg(2+) transporter.

Homo sapiens (taxid: 9606)

>sp|Q9JJC8|NIPA2_MOUSE Magnesium transporter NIPA2 OS=Mus musculus GN=Nipa2 PE=1 SV=1

 Score =  138 bits (347), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 2/149 (1%)

Query: 11  VAATVSVVLALVLHF--EPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQ 68
           V AT  V++AL+  F   PR GQTNILVY+ ICS++G+ +V  +K +GIAIK  L G   
Sbjct: 153 VFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELLAGKPV 212

Query: 69  IAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWS 128
           + +P  W  L    VCV TQ+NYLN+ALD FN +IV+P+YYV FTT  +  SAI+FK+W 
Sbjct: 213 LQHPLAWILLFSLVVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQ 272

Query: 129 GQDVSGIASEICGFITVLSGTIILHATRE 157
              V  +   + GF T++ G  +LHA ++
Sbjct: 273 DMPVDDVIGTLSGFFTIIVGIFLLHAFKD 301

Acts as a selective Mg(2+) transporter.

Mus musculus (taxid: 10090)

>sp|Q5RDB8|NIPA3_PONAB Magnesium transporter NIPA3 OS=Pongo abelii GN=NIPAL1 PE=2 SV=1

 Score =  126 bits (317), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 99/160 (61%)

Query: 2   FQSTDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKL 61
            +   F+ +      + L L+L   P+ GQTNILVY+ ICSL+G+ +V S+K +GIAIK 
Sbjct: 204 LRDPGFISFAVIVTVISLVLILIVAPKKGQTNILVYISICSLIGAFSVSSVKGLGIAIKE 263

Query: 62  TLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASA 121
            ++      +P  +  L V  + V TQ+NYLNKALDTFN +IV+P+YYV FT++ +  SA
Sbjct: 264 LIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTSIVTPIYYVFFTSMVVTCSA 323

Query: 122 IMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQT 161
           I+F++W G     I   + GF T++ G  +LHA +  + T
Sbjct: 324 ILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKNTDIT 363

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Pongo abelii (taxid: 9601)

>sp|Q6NVV3|NIPA3_HUMAN Magnesium transporter NIPA3 OS=Homo sapiens GN=NIPAL1 PE=2 SV=1

 Score =  125 bits (313), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 99/160 (61%)

Query: 2   FQSTDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKL 61
            +   F+ +      + L L+L   P+ GQTNILVY+ ICSL+G+ +V S+K +GIAIK 
Sbjct: 204 LRDPGFISFAVIITVISLVLILIVAPKKGQTNILVYISICSLIGAFSVSSVKGLGIAIKE 263

Query: 62  TLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASA 121
            ++      +P  +  L V  + V TQ+NYLNKALDTFN ++V+P+YYV FT++ +  SA
Sbjct: 264 LIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTSLVTPIYYVFFTSMVVTCSA 323

Query: 122 IMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQT 161
           I+F++W G     I   + GF T++ G  +LHA +  + T
Sbjct: 324 ILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKNTDIT 363

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Homo sapiens (taxid: 9606)

>sp|Q0D2K0|NIPA4_HUMAN Magnesium transporter NIPA4 OS=Homo sapiens GN=NIPAL4 PE=1 SV=3

 Score =  120 bits (302), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 100/161 (62%)

Query: 3   QSTDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLT 62
           + T F+++    +   L L+    PR GQ NIL+Y+ ICS++G+ +V ++K +GI IK  
Sbjct: 255 KDTGFIVFAVLLLVSCLILIFVIAPRYGQRNILIYIIICSVIGAFSVAAVKGLGITIKNF 314

Query: 63  LDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAI 122
             G+  + +P  +    + A+ + TQ+N+LN+ALD FN ++V P+YYV FTT+ + +S I
Sbjct: 315 FQGLPVVRHPLPYILSLILALSLSTQVNFLNRALDIFNTSLVFPIYYVFFTTVVVTSSII 374

Query: 123 MFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTA 163
           +FK+W       IA  + GF+T++ G  +LHA ++ + + A
Sbjct: 375 LFKEWYSMSAVDIAGTLSGFVTIILGVFMLHAFKDLDISCA 415

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+) (By similarity). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Homo sapiens (taxid: 9606)

>sp|Q8BZF2|NIPA4_MOUSE Magnesium transporter NIPA4 OS=Mus musculus GN=Nipal4 PE=1 SV=1

 Score =  120 bits (301), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 99/164 (60%), Gaps = 2/164 (1%)

Query: 3   QSTDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLT 62
           + T F+++    V   L L+    PR GQ NIL+Y+ ICS++GS +V ++K +G+ I+  
Sbjct: 195 KDTGFIVFAVLLVVSCLILIFIVAPRYGQRNILIYIIICSVIGSFSVTAVKGLGVTIRNF 254

Query: 63  LDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAI 122
             G+  + +P  +    +  + ++ Q+N+LN+ALD FN ++V P+YYV FTT+ + +S +
Sbjct: 255 FQGLPVVRHPLPYILSLILGLSIIIQVNFLNRALDIFNTSLVFPIYYVFFTTVVVASSIV 314

Query: 123 MFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE--QTTAP 164
           +FK+W       I   + GF+T++ G  +LHA ++ +  Q + P
Sbjct: 315 LFKEWYTMSAVDIVGTLSGFVTIILGVFMLHAFKDLDINQISLP 358

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Mus musculus (taxid: 10090)

>sp|Q7RTP0|NIPA1_HUMAN Magnesium transporter NIPA1 OS=Homo sapiens GN=NIPA1 PE=1 SV=1

 Score = 96.7 bits (239), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/153 (37%), Positives = 90/153 (58%), Gaps = 2/153 (1%)

Query: 7   FLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTL--D 64
           F+ Y+   + ++L L+    P  G TNI+VY+ ICSL+GS TV S K IG+A +  L  +
Sbjct: 161 FVGYLCIVLLMLLLLIFWIAPAHGPTNIMVYISICSLLGSFTVPSTKGIGLAAQDILHNN 220

Query: 65  GISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMF 124
             SQ A       L V    ++ Q  Y+NKAL+ F++++   +YYV+FTTL ++ASAI+F
Sbjct: 221 PSSQRALCLCLVLLAVLGCSIIVQFRYINKALECFDSSVFGAIYYVVFTTLVLLASAILF 280

Query: 125 KDWSGQDVSGIASEICGFITVLSGTIILHATRE 157
           ++WS   +       CGF TV  G +++   +E
Sbjct: 281 REWSNVGLVDFLGMACGFTTVSVGIVLIQVFKE 313

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+).

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	196
225427938	334	PREDICTED: magnesium transporter NIPA2 [	0.964	0.565	0.847	7e-89
356544720	337	PREDICTED: magnesium transporter NIPA2-l	0.948	0.551	0.818	2e-83
388504420	334	unknown [Medicago truncatula]	0.948	0.556	0.775	3e-79
449454187	333	PREDICTED: magnesium transporter NIPA2-l	0.943	0.555	0.770	9e-78
297824951	328	hypothetical protein ARALYDRAFT_480961 [	0.938	0.560	0.743	2e-76
4803931	323	unknown protein [Arabidopsis thaliana]	0.938	0.569	0.737	4e-76
356541021	197	PREDICTED: LOW QUALITY PROTEIN: magnesiu	0.913	0.908	0.746	6e-76
30681265	328	uncharacterized protein [Arabidopsis tha	0.938	0.560	0.737	6e-76
224078113	298	predicted protein [Populus trichocarpa]	0.790	0.520	0.896	7e-76
255574704	320	Non-imprinted in Prader-Willi/Angelman s	0.780	0.478	0.856	1e-71

>gi|225427938|ref|XP_002277315.1| PREDICTED: magnesium transporter NIPA2 [Vitis vinifera] gi|297744652|emb|CBI37914.3| unnamed protein product [Vitis vinifera]

 Score =  332 bits (850), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 161/190 (84%), Positives = 177/190 (93%), Gaps = 1/190 (0%)

Query: 7   FLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGI 66
           FLIYVAAT+S VLAL+L+FEPR GQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTL+GI
Sbjct: 146 FLIYVAATLSAVLALILYFEPRYGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLEGI 205

Query: 67  SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKD 126
           SQ+AYPQTWFFLTVAAVCV+TQLNYLNKALDTFNAAIVSP+YYVMFTTLTI ASAIMFKD
Sbjct: 206 SQVAYPQTWFFLTVAAVCVITQLNYLNKALDTFNAAIVSPIYYVMFTTLTISASAIMFKD 265

Query: 127 WSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLI 186
           WSGQ+ S IASEICGFITVLSGTIILHATRE E  TA  GT+TWY+SGD++KG E+EH I
Sbjct: 266 WSGQNASSIASEICGFITVLSGTIILHATREQEPATAS-GTITWYLSGDAMKGVEDEHFI 324

Query: 187 TIHNSDYYVQ 196
           T+H+SDY+ Q
Sbjct: 325 TLHHSDYFEQ 334

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544720|ref|XP_003540795.1| PREDICTED: magnesium transporter NIPA2-like [Glycine max]

 Score =  313 bits (802), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 153/187 (81%), Positives = 167/187 (89%), Gaps = 1/187 (0%)

Query: 7   FLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGI 66
           FL YV ATVSVVLAL++HFEPR GQTN+LVYLGICSL+GSLTVVSIKAIGIAIKLTLDGI
Sbjct: 149 FLFYVMATVSVVLALIVHFEPRYGQTNMLVYLGICSLVGSLTVVSIKAIGIAIKLTLDGI 208

Query: 67  SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKD 126
           SQIAYPQTWFFLTVA +CV+TQLNYLN+ALDTFNA IVSPVYYVMFTTLTIIASAIMFKD
Sbjct: 209 SQIAYPQTWFFLTVATICVITQLNYLNRALDTFNATIVSPVYYVMFTTLTIIASAIMFKD 268

Query: 127 WSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLI 186
           WSGQDVS IASEICGFITVL+GTIILH TRE E++     T TW++  D +KG E EHLI
Sbjct: 269 WSGQDVSSIASEICGFITVLTGTIILHMTREQEESNMQ-KTSTWFIGEDLMKGVENEHLI 327

Query: 187 TIHNSDY 193
            IH+SDY
Sbjct: 328 RIHDSDY 334

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388504420|gb|AFK40276.1| unknown [Medicago truncatula]

 Score =  299 bits (766), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 145/187 (77%), Positives = 168/187 (89%), Gaps = 1/187 (0%)

Query: 6   DFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDG 65
           +F+IY AATVSVVLAL+L+FEPR GQ N+LVYLGICSLMGSLTV+SIKAIGIAIKLTLDG
Sbjct: 145 EFMIYAAATVSVVLALILNFEPRYGQKNMLVYLGICSLMGSLTVMSIKAIGIAIKLTLDG 204

Query: 66  ISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFK 125
           I+QIAYPQTWFF+ VA++CVVTQLNYLNKALDTF+A IV+PVYYVMFTTLTI+ASAIMFK
Sbjct: 205 INQIAYPQTWFFVIVASICVVTQLNYLNKALDTFDATIVTPVYYVMFTTLTIVASAIMFK 264

Query: 126 DWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHL 185
           DWSGQDVS +ASEICGFITVL+GTIILH T+E E+ T   GT++W++S DS K  E+EHL
Sbjct: 265 DWSGQDVSSVASEICGFITVLTGTIILHGTKEQEEFTRK-GTMSWFMSEDSTKCVEDEHL 323

Query: 186 ITIHNSD 192
           I I+  D
Sbjct: 324 IVINGPD 330

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449454187|ref|XP_004144837.1| PREDICTED: magnesium transporter NIPA2-like [Cucumis sativus] gi|449510408|ref|XP_004163655.1| PREDICTED: magnesium transporter NIPA2-like [Cucumis sativus]

 Score =  295 bits (754), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 144/187 (77%), Positives = 166/187 (88%), Gaps = 2/187 (1%)

Query: 7   FLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGI 66
           FL+Y+AA  S+VLAL+L+FEPR G  NILVYLGICSLMGSLTV+SIKAIGIAI+LTL+GI
Sbjct: 146 FLVYIAAIASLVLALMLYFEPRYGHVNILVYLGICSLMGSLTVMSIKAIGIAIRLTLEGI 205

Query: 67  SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKD 126
           SQ+AYPQTW F+TVA VCV+TQLNYLNKALDTFNAA+VSPVYY MFTTLTIIASAIMFKD
Sbjct: 206 SQVAYPQTWLFVTVAVVCVITQLNYLNKALDTFNAALVSPVYYAMFTTLTIIASAIMFKD 265

Query: 127 WSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLI 186
           WSGQ+ S I SE+CGF+TVLSGTIILH+TRE +Q  +  G+V WY+SGDS+K + EEHLI
Sbjct: 266 WSGQNASTIVSELCGFVTVLSGTIILHSTRE-QQPVSSQGSVAWYISGDSMK-SFEEHLI 323

Query: 187 TIHNSDY 193
           TI NS Y
Sbjct: 324 TISNSHY 330

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824951|ref|XP_002880358.1| hypothetical protein ARALYDRAFT_480961 [Arabidopsis lyrata subsp. lyrata] gi|297326197|gb|EFH56617.1| hypothetical protein ARALYDRAFT_480961 [Arabidopsis lyrata subsp. lyrata]

 Score =  290 bits (742), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 139/187 (74%), Positives = 160/187 (85%), Gaps = 3/187 (1%)

Query: 7   FLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGI 66
           FLIYVA T+S+VLAL+LHFEP CGQTNILVY+GICSLMG+LTV+SIKAIGIAIKLT++G+
Sbjct: 145 FLIYVAITMSIVLALILHFEPLCGQTNILVYIGICSLMGALTVMSIKAIGIAIKLTMEGV 204

Query: 67  SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKD 126
           SQI YPQTW F+ VA  CVVTQL YLNKALDTFNAAIVSPVYYVMFTTLTI+ASAIMFKD
Sbjct: 205 SQIGYPQTWLFVMVAVTCVVTQLIYLNKALDTFNAAIVSPVYYVMFTTLTIVASAIMFKD 264

Query: 127 WSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLI 186
           WSGQD + +ASE+CGFITVL+GT+ILH TRE EQ  A    V WY   DS K   EEHLI
Sbjct: 265 WSGQDAASVASELCGFITVLTGTMILHGTREEEQQQASSEQVRWY---DSRKSMNEEHLI 321

Query: 187 TIHNSDY 193
           ++++ +Y
Sbjct: 322 SLYSPEY 328

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4803931|gb|AAD29804.1| unknown protein [Arabidopsis thaliana]

 Score =  289 bits (740), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 138/187 (73%), Positives = 160/187 (85%), Gaps = 3/187 (1%)

Query: 7   FLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGI 66
           FLIYVA T+S+VLAL+LHFEP CGQTNILVY+GICSLMG+LTV+SIKAIGIAIKLT++G+
Sbjct: 140 FLIYVAITMSIVLALILHFEPLCGQTNILVYIGICSLMGALTVMSIKAIGIAIKLTMEGV 199

Query: 67  SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKD 126
           SQI YPQTW F+ VA  CVVTQL YLNKALDTFNAAIVSPVYYVMFTTLTI+ASAIMFKD
Sbjct: 200 SQIGYPQTWLFVMVAVTCVVTQLIYLNKALDTFNAAIVSPVYYVMFTTLTIVASAIMFKD 259

Query: 127 WSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLI 186
           WSGQD + +ASE+CGFITVL+GT+ILH TRE EQ  A    V WY   DS K   EEHL+
Sbjct: 260 WSGQDAASVASELCGFITVLTGTMILHGTREEEQQQASSEHVRWY---DSRKSMNEEHLV 316

Query: 187 TIHNSDY 193
           ++++ +Y
Sbjct: 317 SLYSPEY 323

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541021|ref|XP_003538982.1| PREDICTED: LOW QUALITY PROTEIN: magnesium transporter NIPA2-like [Glycine max]

 Score =  288 bits (738), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 144/193 (74%), Positives = 158/193 (81%), Gaps = 14/193 (7%)

Query: 15  VSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQT 74
           VSVVL L++HFEP  GQTN+LVYLGICSL+GSLTVVSIKAIGIAIKLTLDGISQI YPQT
Sbjct: 2   VSVVLPLIIHFEPHYGQTNMLVYLGICSLVGSLTVVSIKAIGIAIKLTLDGISQIVYPQT 61

Query: 75  WFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSG 134
           WFFLTVA +CV+TQLNYLN+ALDTFNA IVSPVYYVMFTTLTIIA+AIMFKDWSGQD+S 
Sbjct: 62  WFFLTVAIICVITQLNYLNRALDTFNATIVSPVYYVMFTTLTIIATAIMFKDWSGQDISS 121

Query: 135 IASEICGFITVLSGTIILHATREHE----QTTAP----------VGTVTWYVSGDSLKGA 180
           IASEICGFITVL+GTIILH TRE E    QT  P            T TW++  D +K  
Sbjct: 122 IASEICGFITVLTGTIILHMTREQEESNMQTIKPDEVMVSYLFDAETFTWFIGEDLMKDV 181

Query: 181 EEEHLITIHNSDY 193
           E EHLI IH+SDY
Sbjct: 182 ENEHLILIHDSDY 194

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30681265|ref|NP_179708.2| uncharacterized protein [Arabidopsis thaliana] gi|26452186|dbj|BAC43181.1| unknown protein [Arabidopsis thaliana] gi|109946593|gb|ABG48475.1| At2g21120 [Arabidopsis thaliana] gi|330252031|gb|AEC07125.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  288 bits (738), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 138/187 (73%), Positives = 160/187 (85%), Gaps = 3/187 (1%)

Query: 7   FLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGI 66
           FLIYVA T+S+VLAL+LHFEP CGQTNILVY+GICSLMG+LTV+SIKAIGIAIKLT++G+
Sbjct: 145 FLIYVAITMSIVLALILHFEPLCGQTNILVYIGICSLMGALTVMSIKAIGIAIKLTMEGV 204

Query: 67  SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKD 126
           SQI YPQTW F+ VA  CVVTQL YLNKALDTFNAAIVSPVYYVMFTTLTI+ASAIMFKD
Sbjct: 205 SQIGYPQTWLFVMVAVTCVVTQLIYLNKALDTFNAAIVSPVYYVMFTTLTIVASAIMFKD 264

Query: 127 WSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLI 186
           WSGQD + +ASE+CGFITVL+GT+ILH TRE EQ  A    V WY   DS K   EEHL+
Sbjct: 265 WSGQDAASVASELCGFITVLTGTMILHGTREEEQQQASSEHVRWY---DSRKSMNEEHLV 321

Query: 187 TIHNSDY 193
           ++++ +Y
Sbjct: 322 SLYSPEY 328

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078113|ref|XP_002305489.1| predicted protein [Populus trichocarpa] gi|222848453|gb|EEE86000.1| predicted protein [Populus trichocarpa]

 Score =  288 bits (737), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 139/155 (89%), Positives = 150/155 (96%)

Query: 5   TDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLD 64
           T FLIYV AT+SVVLAL+L+FEPRCGQTNILVYLGICSLMGS+TVVSIKAIGIAIKLTL+
Sbjct: 144 TAFLIYVVATLSVVLALILYFEPRCGQTNILVYLGICSLMGSITVVSIKAIGIAIKLTLE 203

Query: 65  GISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMF 124
           GI+QIAYPQTWFFL+VA +CV+TQLNYLN+ALDTFNAAIVSPVYYVMFTTLTIIASAIMF
Sbjct: 204 GINQIAYPQTWFFLSVAVICVITQLNYLNRALDTFNAAIVSPVYYVMFTTLTIIASAIMF 263

Query: 125 KDWSGQDVSGIASEICGFITVLSGTIILHATREHE 159
           KDWSGQDVS IASE+CGFITVLSGTIILHATRE E
Sbjct: 264 KDWSGQDVSSIASELCGFITVLSGTIILHATREQE 298

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574704|ref|XP_002528260.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis] gi|223532297|gb|EEF34098.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis]

 Score =  274 bits (700), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 131/153 (85%), Positives = 144/153 (94%)

Query: 7   FLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGI 66
           FLIYVAA++S+VL L+LHFEPRCGQTN+LVYLGICSL+GS+TVVSIKAIGIAIKLTL+G 
Sbjct: 146 FLIYVAASLSMVLVLILHFEPRCGQTNMLVYLGICSLIGSITVVSIKAIGIAIKLTLEGT 205

Query: 67  SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKD 126
           SQIAYPQTWFFLTVA +CV+TQLNYLN+ALDTFNA IVSPVYYVMFTTLTI+ASAIMFKD
Sbjct: 206 SQIAYPQTWFFLTVAVICVITQLNYLNRALDTFNATIVSPVYYVMFTTLTIVASAIMFKD 265

Query: 127 WSGQDVSGIASEICGFITVLSGTIILHATREHE 159
           WSGQ+ S I SEICGFITVLSGTIILHATR  E
Sbjct: 266 WSGQNASSITSEICGFITVLSGTIILHATRGQE 298

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	196
TAIR|locus:2047112	328	AT2G21120 [Arabidopsis thalian	0.938	0.560	0.689	5.8e-66
TAIR|locus:2141742	326	AT4G38730 "AT4G38730" [Arabido	0.928	0.558	0.657	4.3e-61
TAIR|locus:2016084	343	AT1G71900 "AT1G71900" [Arabido	0.770	0.440	0.602	3.7e-48
TAIR|locus:2009343	368	AT1G34470 "AT1G34470" [Arabido	0.826	0.440	0.530	6e-48
TAIR|locus:2076186	335	AT3G23870 "AT3G23870" [Arabido	0.831	0.486	0.546	5.4e-47
TAIR|locus:2136912	386	AT4G09640 "AT4G09640" [Arabido	0.770	0.391	0.556	6.2e-46
TAIR|locus:2119540	336	AT4G13800 [Arabidopsis thalian	0.831	0.485	0.527	1.6e-45
UNIPROTKB|E1BD04	412	NIPAL1 "Uncharacterized protei	0.836	0.398	0.409	1.8e-32
UNIPROTKB|J9NXM0	413	NIPAL1 "Uncharacterized protei	0.836	0.397	0.415	6e-32
CGD|CAL0004327	368	orf19.5352 [Candida albicans (	0.765	0.407	0.446	1.6e-31

TAIR|locus:2047112 AT2G21120 [Arabidopsis thaliana (taxid:3702)]

 Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
 Identities = 129/187 (68%), Positives = 148/187 (79%)

Query:     7 FLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGI 66
             FLIY             HFEP CGQTNILVY+GICSLMG+LTV+SIKAIGIAIKLT++G+
Sbjct:   145 FLIYVAITMSIVLALILHFEPLCGQTNILVYIGICSLMGALTVMSIKAIGIAIKLTMEGV 204

Query:    67 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKD 126
             SQI YPQTW F+ VA  CVVTQL YLNKALDTFNAAIVSPVYYVMFTTLTI+ASAIMFKD
Sbjct:   205 SQIGYPQTWLFVMVAVTCVVTQLIYLNKALDTFNAAIVSPVYYVMFTTLTIVASAIMFKD 264

Query:   127 WSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLI 186
             WSGQD + +ASE+CGFITVL+GT+ILH TRE EQ  A    V WY   DS K   EEHL+
Sbjct:   265 WSGQDAASVASELCGFITVLTGTMILHGTREEEQQQASSEHVRWY---DSRKSMNEEHLV 321

Query:   187 TIHNSDY 193
             ++++ +Y
Sbjct:   322 SLYSPEY 328

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009625 "response to insect" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

TAIR|locus:2141742 AT4G38730 "AT4G38730" [Arabidopsis thaliana (taxid:3702)]

 Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
 Identities = 123/187 (65%), Positives = 147/187 (78%)

Query:     7 FLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGI 66
             FLIY             + EP CGQTNILVY+GICSLMGSLTV+SIKA+GIAIKLT +GI
Sbjct:   145 FLIYVAISMSIVLALILYCEPLCGQTNILVYIGICSLMGSLTVMSIKAVGIAIKLTFEGI 204

Query:    67 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKD 126
             +QI YP+TWFF  VAA+CVV Q+ YLNKALDTFNAAIVSP+YYVMFTTLTI+ASAIMFKD
Sbjct:   205 NQIWYPETWFFAMVAAICVVMQMIYLNKALDTFNAAIVSPIYYVMFTTLTIVASAIMFKD 264

Query:   127 WSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLI 186
             W+GQ+   IASEICGFITVL+GT+ILH+TRE EQ + P   + W  SG S    +EEHL 
Sbjct:   265 WNGQNTDSIASEICGFITVLTGTVILHSTREEEQAS-P-RRMRWQDSGKSF---DEEHLT 319

Query:   187 TIHNSDY 193
             ++++ +Y
Sbjct:   320 SLYSPEY 326

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2016084 AT1G71900 "AT1G71900" [Arabidopsis thaliana (taxid:3702)]

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 91/151 (60%), Positives = 115/151 (76%)

Query:     7 FLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGI 66
             F+ Y              F P+ GQTN++VY+GICSL+GSL+V+S+KA+GIA+KLT  G 
Sbjct:   159 FMFYASLVIGAAVFLIIRFVPQYGQTNVMVYIGICSLVGSLSVMSVKALGIALKLTFSGT 218

Query:    67 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKD 126
             +Q+ YPQTW F  V   CVVTQLNYLNKALDTFN AIVSP+YYVMFT+LTI+AS IMFKD
Sbjct:   219 NQLFYPQTWIFTLVVLTCVVTQLNYLNKALDTFNTAIVSPIYYVMFTSLTILASVIMFKD 278

Query:   127 WSGQDVSGIASEICGFITVLSGTIILHATRE 157
             W  Q+ + I +EICGF+T+LSGT +LH T++
Sbjct:   279 WDRQNGTQIVTEICGFVTILSGTFLLHRTKD 309

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2009343 AT1G34470 "AT1G34470" [Arabidopsis thaliana (taxid:3702)]

 Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
 Identities = 86/162 (53%), Positives = 122/162 (75%)

Query:     7 FLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGI 66
             FL+Y              F P+ GQ++++VY+G+CSL+GSL+V+S+KA+GIA+KLT  G+
Sbjct:   159 FLLYAAAVVGAAIILIVQFVPQYGQSHVMVYIGVCSLVGSLSVMSVKALGIALKLTFSGM 218

Query:    67 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKD 126
             +Q+ YPQTW F  +   CV+TQ+NYLNKALDTFN A+VSP+YYVMFT+LTI+AS IMFKD
Sbjct:   219 NQLIYPQTWVFTLIVLTCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKD 278

Query:   127 WSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTV 168
             W  QD + I +E+CGF+T+LSGT +LH T++    ++ +G +
Sbjct:   279 WDRQDGTQIVTELCGFVTILSGTFLLHKTKDMVDGSSSLGNL 320

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2076186 AT3G23870 "AT3G23870" [Arabidopsis thaliana (taxid:3702)]

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 89/163 (54%), Positives = 119/163 (73%)

Query:     7 FLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGI 66
             FL+Y             ++EPR G+T+++VY+GICSLMGSLTV+S+KA+ IAIKLT  G 
Sbjct:   148 FLVYSAVIVIVVAILIFYYEPRYGKTHMIVYVGICSLMGSLTVMSVKAVAIAIKLTFSGT 207

Query:    67 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKD 126
             +Q  Y  TW F+ V A C + Q+NYLNKALDTFN A++SPVYYVMFTT TIIAS IMFKD
Sbjct:   208 NQFKYFNTWIFILVVATCCILQINYLNKALDTFNTAVISPVYYVMFTTFTIIASMIMFKD 267

Query:   127 WSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVT 169
             W+ Q    IA+E+CGF+T+LSGT +LH T++   + +  G+++
Sbjct:   268 WASQSGLKIATELCGFVTILSGTFLLHKTKDMGNSASGRGSIS 310

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2136912 AT4G09640 "AT4G09640" [Arabidopsis thaliana (taxid:3702)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 84/151 (55%), Positives = 112/151 (74%)

Query:     7 FLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGI 66
             FL Y              F P  GQ++++VY+G+CSL+GSL+V+S+KA+GIA+KLT  G 
Sbjct:   159 FLFYAAAVVGAAIVLIVQFIPLYGQSHVMVYIGVCSLIGSLSVMSVKALGIALKLTFSGT 218

Query:    67 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKD 126
             +Q+ YPQTW F  +   CV+TQ+NYLNKALDTFN A+VSP+YYVMFT+LTI+AS IMFKD
Sbjct:   219 NQLGYPQTWVFTVIVLFCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKD 278

Query:   127 WSGQDVSGIASEICGFITVLSGTIILHATRE 157
             W  Q  + I +E+CGF+T+LSGT +LH T +
Sbjct:   279 WDRQSGTQIMTELCGFVTILSGTFLLHTTTD 309

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2119540 AT4G13800 [Arabidopsis thaliana (taxid:3702)]

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 86/163 (52%), Positives = 117/163 (71%)

Query:     7 FLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGI 66
             FL Y             ++EPR G+T+++VY+GICSLMGSLTV+S+KA+ IAIKLT  G+
Sbjct:   148 FLAYSAVVLVVVLALIFYYEPRYGKTHMIVYVGICSLMGSLTVMSVKAVAIAIKLTFSGM 207

Query:    67 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKD 126
             +Q  Y   W F+ V  +C + Q+NYLNKALD FN A++SPVYYVMFTT TI+AS IMFKD
Sbjct:   208 NQFKYFHAWIFIIVVTICCILQINYLNKALDNFNTAVISPVYYVMFTTFTILASMIMFKD 267

Query:   127 WSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVT 169
             W+ Q    IA+E+CGF+T+LSGT +LH T++   +T+  G+ +
Sbjct:   268 WASQSGLQIATELCGFVTILSGTFLLHKTKDMGNSTSLRGSTS 310

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E1BD04 NIPAL1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 68/166 (40%), Positives = 110/166 (66%)

Query:    27 PRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVV 86
             P+ GQTNILVY+ ICSL+G+ +V S+K +GIAIK  L+      +P  +  L V  + V 
Sbjct:   229 PKKGQTNILVYISICSLIGAFSVSSVKGLGIAIKELLEWKPVYKHPLVFVLLAVLVLSVA 288

Query:    87 TQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVL 146
             TQ+NYLNKALDTFN ++V+P+YYV+FT++ +  SAI+F++W G +   +   + GF T++
Sbjct:   289 TQINYLNKALDTFNTSLVTPIYYVLFTSMVVTCSAILFQEWYGMNAGDVIGTLSGFFTII 348

Query:   147 SGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSD 192
             +G  +LHA +  + T + + T T      S  G+E+++++ + N+D
Sbjct:   349 NGIFLLHAFKNIDITWSDL-TSTTQKEVLSANGSEDKYVL-LENTD 392

GO:0016020 "membrane" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

UNIPROTKB|J9NXM0 NIPAL1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 69/166 (41%), Positives = 108/166 (65%)

Query:    27 PRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVV 86
             P+ GQTNILVY+ ICSL+G+ +V S+K +GIAIK  L+      +P  +  L V  + V+
Sbjct:   229 PKKGQTNILVYISICSLIGAFSVSSVKGLGIAIKELLEWKPIYKHPLVFVLLAVLVLSVM 288

Query:    87 TQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVL 146
             TQ+NYLNKALDTFN A+V+P+YYV FT++ +  S I+F++W G     I   + GF T++
Sbjct:   289 TQINYLNKALDTFNTALVTPIYYVFFTSMVVTCSVILFQEWYGMKAGDIIGTLSGFFTII 348

Query:   147 SGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSD 192
             +G  +LHA +  + T + + T T      SL G E+++++ + N++
Sbjct:   349 NGIFLLHAFKHTDITWSDL-TSTTQKEVLSLNGNEDKYVL-LENTE 392

GO:0016020 "membrane" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

CGD|CAL0004327 orf19.5352 [Candida albicans (taxid:5476)]

 Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 67/150 (44%), Positives = 96/150 (64%)

Query:     7 FLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGI 66
             F+ Y                P+ G TN ++YL ICS +GS++V+SIKA GIA+KLTL G 
Sbjct:   145 FMFYCTVVTLYSLFMIYKIVPKYGNTNPMIYLSICSSVGSISVMSIKAFGIALKLTLGGN 204

Query:    67 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKD 126
             +Q  +  T+ FL V A+C+VTQ+NY NKALD F+ +IV+P+YYV FTT T+ AS I+FK 
Sbjct:   205 NQFTHVSTYLFLIVVALCIVTQMNYFNKALDQFDTSIVNPLYYVTFTTFTLAASFILFKG 264

Query:   127 WSGQDVSGIASEICGFITVLSGTIILHATR 156
             ++      I S + GF+ + SG  +L+ +R
Sbjct:   265 FNTSSAVDIISLLIGFLIIFSGVYLLNISR 294

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh2_kg.4__21__AT2G21120.1 annotation not avaliable (328 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	196
pfam05653	300	pfam05653, Mg_trans_NIPA, Magnesium transporter NI	2e-71

>gnl|CDD|114381 pfam05653, Mg_trans_NIPA, Magnesium transporter NIPA

 Score =  218 bits (557), Expect = 2e-71
 Identities = 99/156 (63%), Positives = 118/156 (75%)

Query: 7   FLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGI 66
           FL+YV   V VVL L+   EPR GQTNILVY+ ICSL+GSLTV+S+KA+GIAIKLT  G 
Sbjct: 145 FLVYVILVVGVVLILIFFVEPRHGQTNILVYITICSLIGSLTVMSVKALGIAIKLTFSGK 204

Query: 67  SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKD 126
           +Q+ YPQ W FL V   CVVTQ+NYLNKALD FN +IV+PVYYV FTT  I ASAI+FK+
Sbjct: 205 NQLGYPQFWIFLVVVVTCVVTQINYLNKALDIFNTSIVTPVYYVFFTTSVIAASAILFKE 264

Query: 127 WSGQDVSGIASEICGFITVLSGTIILHATREHEQTT 162
           W GQ    IA E+CGF T+L GT +LHATR+ E + 
Sbjct: 265 WLGQSFDDIAGELCGFFTILLGTFLLHATRDIEFSQ 300

NIPA (nonimprinted in Prader-Willi/Angelman syndrome) is a family of integral membrane proteins which function as magnesium transporters. Length = 300

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	196
KOG2922	335	consensus Uncharacterized conserved protein [Funct	100.0
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	100.0
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	95.3
PRK09541	110	emrE multidrug efflux protein; Reviewed	95.22
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	95.2
PRK11431	105	multidrug efflux system protein; Provisional	95.18
PRK10650	109	multidrug efflux system protein MdtI; Provisional	94.53
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	94.32
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	91.46
COG2510	140	Predicted membrane protein [Function unknown]	91.36
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	91.1
COG2076	106	EmrE Membrane transporters of cations and cationic	87.58
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	86.46
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	85.79
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	85.26
PLN00411	358	nodulin MtN21 family protein; Provisional	85.25
PF13536	113	EmrE: Multidrug resistance efflux transporter	84.08
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	82.59
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	82.41
PF08507	136	COPI_assoc: COPI associated protein; InterPro: IPR	81.59

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=1.3e-49  Score=352.73  Aligned_cols=164  Identities=60%  Similarity=1.042  Sum_probs=160.7

Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHhhccccCccceEEEEeeeccccccchhhhHHHHHHHHHHccCCCccchhHHHHHHHH
Q 029288            1 MFQSTDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTV   80 (196)
Q Consensus         1 ~~~~p~Fl~Y~~~~~~~~~~Li~~~~pr~g~~~~~vyv~icsl~Gs~tVl~~K~~~~ll~~t~~g~nqf~~~~ty~~l~~   80 (196)
                      ++++|+|++|+.+++++.++++++.+||+|++|+++|+++||++||+||+++|++|+++|++++|+||+.||+||+++++
T Consensus       153 ~~~~~~Fliy~~~iil~~~il~~~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql~~~~ty~~~l~  232 (335)
T KOG2922|consen  153 LATEPGFLVYVIIIILIVLILIFFYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQLFYPLTWIFLLV  232 (335)
T ss_pred             HhcCccHHHHHHHHHHHHHHHheeecccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCcccccHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhccccceeeccceeehhHHHHhhhhhhhhcccCCCChhhHHHHHHHHHHHhhheeeeccccCCCC
Q 029288           81 AAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQ  160 (196)
Q Consensus        81 lv~t~i~Qi~yLNkAL~~fdt~~V~Pvyyv~fT~~~Ii~g~I~f~E~~~~~~~~i~~~~~G~~ii~~GV~lLs~~~~~~~  160 (196)
                      ++.|+++|++|||||||+|||++|+|+|||+||+++|++|+|+||||++++..|+.+++|||+++++|+++|+++||+++
T Consensus       233 ~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd~~~  312 (335)
T KOG2922|consen  233 VATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTKDMEI  312 (335)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeeccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCC
Q 029288          161 TTAP  164 (196)
Q Consensus       161 ~~~~  164 (196)
                      ++++
T Consensus       313 ~~~s  316 (335)
T KOG2922|consen  313 SLAS  316 (335)
T ss_pred             cccc
Confidence            7654

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=100.00  E-value=8.4e-45  Score=321.11  Aligned_cols=162  Identities=43%  Similarity=0.783  Sum_probs=157.6

Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHhhccccCccceEEEEeeeccccccchhhhHHHHHHHHHHccCCCccchhHHHHHHHH
Q 029288            1 MFQSTDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTV   80 (196)
Q Consensus         1 ~~~~p~Fl~Y~~~~~~~~~~Li~~~~pr~g~~~~~vyv~icsl~Gs~tVl~~K~~~~ll~~t~~g~nqf~~~~ty~~l~~   80 (196)
                      ++.+|+|++|++++.+..+.++++.+||+|++|+++|+++||++||+||+++|+++++++++++|+|||.||.+|+++++
T Consensus       139 ~~~~~~fl~y~~~~~~~~~~L~~~~~~r~g~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f~~~~~y~l~~~  218 (300)
T PF05653_consen  139 LLSQPGFLVYFILVLVLILILIFFIKPRYGRRNILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQFTYPLTYLLLLV  218 (300)
T ss_pred             HhcCcceehhHHHHHHHHHHHHHhhcchhcccceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchhhhhhHHHHHHHH
Confidence            36799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhccccceeeccceeehhHHHHhhhhhhhhcccCCCChhhHHHHHHHHHHHhhheeeeccccCCCC
Q 029288           81 AAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQ  160 (196)
Q Consensus        81 lv~t~i~Qi~yLNkAL~~fdt~~V~Pvyyv~fT~~~Ii~g~I~f~E~~~~~~~~i~~~~~G~~ii~~GV~lLs~~~~~~~  160 (196)
                      +++|+++|++||||||++||+++|+|+|||+||++++++|+|+||||+++++++++++++|++++++||++|+.+||+++
T Consensus       219 ~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~~~~  298 (300)
T PF05653_consen  219 LVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKDKEI  298 (300)
T ss_pred             HHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCchhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             CC
Q 029288          161 TT  162 (196)
Q Consensus       161 ~~  162 (196)
                      +|
T Consensus       299 ~~  300 (300)
T PF05653_consen  299 SQ  300 (300)
T ss_pred             cC
Confidence            64

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=95.30  E-value=0.035  Score=43.87  Aligned_cols=72  Identities=11%  Similarity=0.148  Sum_probs=53.4

Q ss_pred             HHHHHHHHHHHHHHHhccccceeeccceeehhHHHHhhhhh-hhhcccCCCChhhHHHHHHHHHHHhhheeeeccccCC
Q 029288           81 AAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASA-IMFKDWSGQDVSGIASEICGFITVLSGTIILHATREH  158 (196)
Q Consensus        81 lv~t~i~Qi~yLNkAL~~fdt~~V~Pvyyv~fT~~~Ii~g~-I~f~E~~~~~~~~i~~~~~G~~ii~~GV~lLs~~~~~  158 (196)
                      -+++-..-....|++|++-|.+...|+....+....+.+-. ++|+|  ..++.+    .+|..+++.||++++..+++
T Consensus        54 gl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E--~ls~~~----~iGi~lIi~GV~lv~~~~~~  126 (129)
T PRK02971         54 GLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNE--TFSLKK----TLGVACIMLGVWLINLPTTK  126 (129)
T ss_pred             HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCC--CCCHHH----HHHHHHHHHHHHHhccCCCC
Confidence            33455666788999999999999999987776555555544 48988  445554    47889999999999865543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=95.22  E-value=0.04  Score=42.54  Aligned_cols=81  Identities=14%  Similarity=0.194  Sum_probs=58.6

Q ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHHHHhccccceeeccceeehhHHHHhhhhhhhhcccCCCChhhHHHHHHHHHHHh
Q 029288           67 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVL  146 (196)
Q Consensus        67 nqf~~~~ty~~l~~lv~t~i~Qi~yLNkAL~~fdt~~V~Pvyyv~fT~~~Ii~g~I~f~E~~~~~~~~i~~~~~G~~ii~  146 (196)
                      +.|++|.++..   .+++...-+.+|.+|++..+-++.+|+-=..=+..+.+.|.++|+|  ..++.+    ..|...++
T Consensus        25 ~gf~~~~~~i~---~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e--~~~~~~----~~gi~lIi   95 (110)
T PRK09541         25 EGFTRLWPSVG---TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQ--RLDLPA----IIGMMLIC   95 (110)
T ss_pred             cCCCchhHHHH---HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCC--CCCHHH----HHHHHHHH
Confidence            45777777663   4556667788999999998888776655444455666779999998  345554    46888999


Q ss_pred             hheeeecccc
Q 029288          147 SGTIILHATR  156 (196)
Q Consensus       147 ~GV~lLs~~~  156 (196)
                      .||.++....
T Consensus        96 ~GVi~l~l~~  105 (110)
T PRK09541         96 AGVLVINLLS  105 (110)
T ss_pred             HHHHHHhcCC
Confidence            9999996543

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=95.20  E-value=0.094  Score=40.16  Aligned_cols=80  Identities=16%  Similarity=0.276  Sum_probs=59.7

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHhccccceeeccceeehhHHHHhhhhhhhhcccCCCChhhHHHHHHHHHHHhhh
Q 029288           69 IAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSG  148 (196)
Q Consensus        69 f~~~~ty~~l~~lv~t~i~Qi~yLNkAL~~fdt~~V~Pvyyv~fT~~~Ii~g~I~f~E~~~~~~~~i~~~~~G~~ii~~G  148 (196)
                      +++|......+...++...-...+-++++.-|.+...|+-+ .=...+.+.|..+|+|  +.++.++    +|...++.|
T Consensus        31 ~~~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~-l~~v~~~~~~~l~f~E--~ls~~~~----~Gi~lii~G  103 (111)
T PRK15051         31 KRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLS-LNFVWVTLAAVKLWHE--PVSPRHW----CGVAFIIGG  103 (111)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHH-HHHHHHHHHHHHHhCC--CCCHHHH----HHHHHHHHH
Confidence            45554333344444566667888999999999999999998 6666778889999998  5566655    677788889


Q ss_pred             eeeeccc
Q 029288          149 TIILHAT  155 (196)
Q Consensus       149 V~lLs~~  155 (196)
                      |.+++.+
T Consensus       104 v~~i~~~  110 (111)
T PRK15051        104 IVILGST  110 (111)
T ss_pred             HHHHhcc
Confidence            8887653

>PRK11431 multidrug efflux system protein; Provisional

Probab=95.18  E-value=0.071  Score=40.91  Aligned_cols=81  Identities=9%  Similarity=0.146  Sum_probs=54.4

Q ss_pred             CCccchhHHHHHHHHHHHHHHHHHHHHHHHhccccceeeccceeehhHHHHhhhhhhhhcccCCCChhhHHHHHHHHHHH
Q 029288           66 ISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITV  145 (196)
Q Consensus        66 ~nqf~~~~ty~~l~~lv~t~i~Qi~yLNkAL~~fdt~~V~Pvyyv~fT~~~Ii~g~I~f~E~~~~~~~~i~~~~~G~~ii  145 (196)
                      .+.|+++.++++.   +++...=.++|.+|++.-+..+.+++.=..=+..+.+.|.++|+|  +.++.++    +|+..+
T Consensus        23 s~gf~~~~~~~~~---i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e--~~~~~~~----~gi~lI   93 (105)
T PRK11431         23 THGFSRLTPSIIT---VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGE--SASPARL----LSLALI   93 (105)
T ss_pred             hhCCccHHHHHHH---HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCC--CCCHHHH----HHHHHH
Confidence            3568888777744   455566688999999976665544433333334445558899998  4455544    678899


Q ss_pred             hhheeeeccc
Q 029288          146 LSGTIILHAT  155 (196)
Q Consensus       146 ~~GV~lLs~~  155 (196)
                      +.||..|...
T Consensus        94 i~GVv~l~l~  103 (105)
T PRK11431         94 VAGIIGLKLS  103 (105)
T ss_pred             HHHHHhhhcc
Confidence            9999998644

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=94.53  E-value=0.066  Score=41.39  Aligned_cols=78  Identities=14%  Similarity=0.254  Sum_probs=54.9

Q ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHHHHhccccceeeccceeehhHHHHhhhhhhhhcccCCCChhhHHHHHHHHHHHh
Q 029288           67 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVL  146 (196)
Q Consensus        67 nqf~~~~ty~~l~~lv~t~i~Qi~yLNkAL~~fdt~~V~Pvyyv~fT~~~Ii~g~I~f~E~~~~~~~~i~~~~~G~~ii~  146 (196)
                      +.|++|...+.   .+++...=.++|.+|++.-+-.+.+|+-=..=+..+.+.|.++|+|  ..++.++    +|+..++
T Consensus        30 ~gf~~~~~~~~---~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e--~~~~~~~----~gi~lIi  100 (109)
T PRK10650         30 DGFRRKIYGIL---SLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQ--RLNRKGW----IGLVLLL  100 (109)
T ss_pred             cCCcchHHHHH---HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCC--CCCHHHH----HHHHHHH
Confidence            56888877553   3455556678999999987776665554444446666778999998  3455544    6778889


Q ss_pred             hheeeec
Q 029288          147 SGTIILH  153 (196)
Q Consensus       147 ~GV~lLs  153 (196)
                      .||.++.
T Consensus       101 ~GVi~lk  107 (109)
T PRK10650        101 AGMVMIK  107 (109)
T ss_pred             HHHHHhc
Confidence            9998774

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=94.32  E-value=0.11  Score=40.74  Aligned_cols=72  Identities=13%  Similarity=0.289  Sum_probs=51.9

Q ss_pred             HHHHHHHHHHHHHHHHhccccceeeccceeehhHHHHhhhhhhhhcccCCCChhhHHHHHHHHHHHhhheeeeccccC
Q 029288           80 VAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATRE  157 (196)
Q Consensus        80 ~lv~t~i~Qi~yLNkAL~~fdt~~V~Pvyyv~fT~~~Ii~g~I~f~E~~~~~~~~i~~~~~G~~ii~~GV~lLs~~~~  157 (196)
                      ..+++...=+..|.+|++.-+-++.+|+.=..=+..+.+.|.++|+|  ..++.+    .+|+.+++.||.++....+
T Consensus        35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E--~~s~~~----~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDE--SLSLMK----IAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCC--CCCHHH----HHHHHHHHHHHHHhhcCCC
Confidence            34455666688999999998888777764444455566678999998  345544    4788899999999865443

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=91.46  E-value=0.51  Score=40.71  Aligned_cols=74  Identities=18%  Similarity=0.301  Sum_probs=56.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccceeeccceeehhHHHHhhhhhhhhcccCCCChhhHHHHHHHHHHHhhheeeecc
Q 029288           75 WFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHA  154 (196)
Q Consensus        75 y~~l~~lv~t~i~Qi~yLNkAL~~fdt~~V~Pvyyv~fT~~~Ii~g~I~f~E~~~~~~~~i~~~~~G~~ii~~GV~lLs~  154 (196)
                      |..++........-...+++|+++-|++...|+.|.. -..+.+-|.++++|  +.+..+++    |..+.+.|+.++..
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~-p~~~~l~~~~~~~e--~~~~~~~~----g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        63 WLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSS-PLLVAIWATLTLGE--TLSPLAWL----GILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhh-HHHHHHHHHHHHcC--CCCHHHHH----HHHHHHHHHHHHhc
Confidence            4344444445667777899999999999999999987 77777778899997  45777764    66667788888765


Q ss_pred             c
Q 029288          155 T  155 (196)
Q Consensus       155 ~  155 (196)
                      .
T Consensus       136 ~  136 (281)
T TIGR03340       136 S  136 (281)
T ss_pred             c
Confidence            3

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG2510 Predicted membrane protein [Function unknown]

Probab=91.36  E-value=1.4  Score=35.68  Aligned_cols=84  Identities=20%  Similarity=0.328  Sum_probs=53.5

Q ss_pred             HccCCCccc---hhHHHH--HHHHHHHHHHHHHHHHHHHhccccceeeccceeehhHHHHhhhhhhhhcccCCCChhhHH
Q 029288           62 TLDGISQIA---YPQTWF--FLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIA  136 (196)
Q Consensus        62 t~~g~nqf~---~~~ty~--~l~~lv~t~i~Qi~yLNkAL~~fdt~~V~Pvyyv~fT~~~Ii~g~I~f~E~~~~~~~~i~  136 (196)
                      ...|+-|-.   .+-.|.  .+-.+...+--+.+|  +||+..+++.|+|+-=.. -..+++=|.++.+|  +++..++ 
T Consensus        51 ~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf--~ALk~G~as~VvPldk~s-vvl~~lls~lfL~E--~ls~~~~-  124 (140)
T COG2510          51 LVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYF--RALKKGKASRVVPLDKTS-VVLAVLLSILFLGE--RLSLPTW-  124 (140)
T ss_pred             HhcCceecccccCcceehhhhHHHHHHHHHHHHHH--HHHhcCCcceEEEccccc-HHHHHHHHHHHhcC--CCCHHHH-
Confidence            344554433   344443  344433333333343  899999999999986432 23345557888887  4555544 


Q ss_pred             HHHHHHHHHhhheeeecc
Q 029288          137 SEICGFITVLSGTIILHA  154 (196)
Q Consensus       137 ~~~~G~~ii~~GV~lLs~  154 (196)
                         .|+..+.+|+.+++.
T Consensus       125 ---iG~~LI~~Gailvs~  139 (140)
T COG2510         125 ---IGIVLIVIGAILVSL  139 (140)
T ss_pred             ---HHHHHHHhCeeeEec
Confidence               788999999999875

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=91.10  E-value=0.8  Score=33.81  Aligned_cols=68  Identities=12%  Similarity=0.074  Sum_probs=32.2

Q ss_pred             CCccchhHHHHHHHHHHHHHHHHHHHHHHHhccccceeeccceeehhHHHHhhhhhhhhcccCCCChhhHHHH
Q 029288           66 ISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE  138 (196)
Q Consensus        66 ~nqf~~~~ty~~l~~lv~t~i~Qi~yLNkAL~~fdt~~V~Pvyyv~fT~~~Ii~g~I~f~E~~~~~~~~i~~~  138 (196)
                      .+.++++..++.   .+.+-..-..++.+|+++-|.++.+|+.-..=+..+.+.|..+|+|  ..++.++++.
T Consensus        23 s~g~~~~~~~~~---~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E--~~s~~~~~gi   90 (93)
T PF00893_consen   23 SHGFTQLIPTIL---AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGE--SLSLSKWLGI   90 (93)
T ss_dssp             -----------H---HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH----------HHHH
T ss_pred             HHhhcchhhHHH---HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCC--CCCHHHHhhe
Confidence            345666655543   3335566678999999999999999988777777788889999998  5567776544

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=87.58  E-value=0.92  Score=35.14  Aligned_cols=76  Identities=20%  Similarity=0.284  Sum_probs=51.7

Q ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHHHHhccccceeeccceeehhHHHHh----hhhhhhhcccCCCChhhHHHHHHHH
Q 029288           67 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTI----IASAIMFKDWSGQDVSGIASEICGF  142 (196)
Q Consensus        67 nqf~~~~ty~~l~~lv~t~i~Qi~yLNkAL~~fdt~~V~Pvyyv~fT~~~I----i~g~I~f~E~~~~~~~~i~~~~~G~  142 (196)
                      +.|+++..++   .++++...-..+|-+|+|.=|-.    +-|..|+-..+    +.|.++|+|  ..++.+    +.|+
T Consensus        25 ~gf~~~~~~i---l~~v~~~~sf~~Ls~alk~ipvg----vAYAiW~GiG~v~~~l~g~~~f~E--~l~~~~----~~gl   91 (106)
T COG2076          25 DGFTRLWPSI---LTIVGYGLSFYLLSLALKTIPLG----VAYAIWTGIGIVGTALVGVLLFGE--SLSLIK----LLGL   91 (106)
T ss_pred             hcccccchHH---HHHHHHHHHHHHHHHHHhhCchH----HHHHHHHHHHHHHHHHHHHHhcCC--cCCHHH----HHHH
Confidence            3456565555   44456666788999999986654    45666665554    558999998  344544    4678


Q ss_pred             HHHhhheeeeccc
Q 029288          143 ITVLSGTIILHAT  155 (196)
Q Consensus       143 ~ii~~GV~lLs~~  155 (196)
                      .+++.||..|...
T Consensus        92 ~LiiaGvi~Lk~~  104 (106)
T COG2076          92 ALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHhhhc
Confidence            8899999887643

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=86.46  E-value=3.4  Score=35.58  Aligned_cols=66  Identities=9%  Similarity=0.145  Sum_probs=47.6

Q ss_pred             HHHHHHHHHHHHHHHHHhccccceeeccceeehhHHHHhhhhhhhhcccCCCChhhHHHHHHHHHHHhhheeee
Q 029288           79 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIIL  152 (196)
Q Consensus        79 ~~lv~t~i~Qi~yLNkAL~~fdt~~V~Pvyyv~fT~~~Ii~g~I~f~E~~~~~~~~i~~~~~G~~ii~~GV~lL  152 (196)
                      ...+.+++ -....|+|+++.+++.+.|..|.. -..+++-|.++++|-  .++.    -..|..+++.|+.++
T Consensus       216 ~~~~~s~l-~~~l~~~al~~~~a~~~~~~~~l~-pv~a~l~g~~~lgE~--~~~~----~~iG~~lil~Gv~l~  281 (281)
T TIGR03340       216 LGGLMIGG-AYALVLWAMTRLPVATVVALRNTS-IVFAVVLGIWFLNER--WYLT----RLMGVCIIVAGLVVL  281 (281)
T ss_pred             HHHHHHHH-HHHHHHHHHhhCCceEEEeecccH-HHHHHHHHHHHhCCC--ccHH----HHHHHHHHHHhHHhC
Confidence            33333444 444678999999999999999875 566777788889983  3333    456777888888764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=85.79  E-value=7.1  Score=34.76  Aligned_cols=92  Identities=10%  Similarity=0.231  Sum_probs=62.3

Q ss_pred             CCccc-hhHHHHH-HHHHHHHHHHHHHHHHHHhccccceeeccceeehhHHHHhhhhhhhhcccCCCChhhHHHHHHHHH
Q 029288           66 ISQIA-YPQTWFF-LTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFI  143 (196)
Q Consensus        66 ~nqf~-~~~ty~~-l~~lv~t~i~Qi~yLNkAL~~fdt~~V~Pvyyv~fT~~~Ii~g~I~f~E~~~~~~~~i~~~~~G~~  143 (196)
                      .+++. ++..|+. ++.=+.-++.|+.-. ++.+.-.-+.-.|+-=.+=-..+.+-|.++|+||++  ..+.+.=+.++.
T Consensus        35 ~p~~~~~~~~~~~~~lsG~~W~iGq~~qf-~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~--~~~~~~G~~Al~  111 (269)
T PF06800_consen   35 QPAFSMSGTSFIVAFLSGAFWAIGQIGQF-KSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTT--TTQKIIGFLALV  111 (269)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCC--cchHHHHHHHHH
Confidence            34554 2344433 333344566676554 577777888889988666666777889999999996  445555566889


Q ss_pred             HHhhheeeeccccCCCC
Q 029288          144 TVLSGTIILHATREHEQ  160 (196)
Q Consensus       144 ii~~GV~lLs~~~~~~~  160 (196)
                      ++++|+.+-+.+++++.
T Consensus       112 liiiGv~lts~~~~~~~  128 (269)
T PF06800_consen  112 LIIIGVILTSYQDKKSD  128 (269)
T ss_pred             HHHHHHHHhcccccccc
Confidence            99999987665544443

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=85.26  E-value=0.86  Score=33.03  Aligned_cols=61  Identities=20%  Similarity=0.304  Sum_probs=46.7

Q ss_pred             HHHHHHHHHHHhccccceeeccceeehhHHHHhhhhhhhhcccCCCChhhHHHHHHHHHHHhhheeee
Q 029288           85 VVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIIL  152 (196)
Q Consensus        85 ~i~Qi~yLNkAL~~fdt~~V~Pvyyv~fT~~~Ii~g~I~f~E~~~~~~~~i~~~~~G~~ii~~GV~lL  152 (196)
                      ...-....++|+++-+++.+.++.+ .-...+.+.|.++++|-  .++.    -..|+.+++.|+.++
T Consensus        64 ~~~~~~~~~~a~~~~~~~~~~~~~~-~~pv~~~i~~~~~~~e~--~~~~----~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   64 TALAYLLYFYALKYISASIVSILQY-LSPVFAAILGWLFLGER--PSWR----QIIGIILIIIGVVLI  124 (126)
T ss_pred             eehHHHHHHHHHHhcchhHHHHHHH-HHHHHHHHHHHHHcCCC--CCHH----HHHHHHHHHHHHHHH
Confidence            3455667799999999999999998 67788888889999884  3444    446677777777664

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=85.25  E-value=1.7  Score=39.63  Aligned_cols=63  Identities=11%  Similarity=0.102  Sum_probs=45.1

Q ss_pred             HHHHHhccccceeeccceeehhHHHHhhhhhhhhcccCCCChhhHHHHHHHHHHHhhheeeeccccCCCC
Q 029288           91 YLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQ  160 (196)
Q Consensus        91 yLNkAL~~fdt~~V~Pvyyv~fT~~~Ii~g~I~f~E~~~~~~~~i~~~~~G~~ii~~GV~lLs~~~~~~~  160 (196)
                      .-|+++++-+++.+.+..|. =-.++.+.|.++++|  ..++.+    ++|+.+++.|+++.++.|.+|.
T Consensus       272 lw~~~v~~~ga~~as~~~~L-~PV~a~llg~l~LgE--~lt~~~----~iG~~LIl~Gv~l~~~~~~~~~  334 (358)
T PLN00411        272 IHSWTVRHKGPLYLAIFKPL-SILIAVVMGAIFLND--SLYLGC----LIGGILITLGFYAVMWGKANEE  334 (358)
T ss_pred             HHHHHHhccCchHHHHHHhH-HHHHHHHHHHHHhCC--CCcHHH----HHHHHHHHHHHHHHHhhhhhhh
Confidence            48999999998876554443 344577778888887  345544    4788999999999886555543

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=84.08  E-value=1.8  Score=32.47  Aligned_cols=65  Identities=17%  Similarity=0.214  Sum_probs=47.9

Q ss_pred             HHHHHHHHHhccccceeeccceeehhHHHHhhhhhhhhcccCCCChhhHHHHHHHHHHHhhheeeeccccCCC
Q 029288           87 TQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE  159 (196)
Q Consensus        87 ~Qi~yLNkAL~~fdt~~V~Pvyyv~fT~~~Ii~g~I~f~E~~~~~~~~i~~~~~G~~ii~~GV~lLs~~~~~~  159 (196)
                      ...-..+.|+++-+ ..+.|+++ .....+.+.|.++|+|  +.++.++    .|..++.+||.++...+...
T Consensus        47 ~~~~~~~~a~~~~~-~~v~~i~~-~~pi~~~ll~~~~~~e--r~~~~~~----~a~~l~~~Gv~li~~~~~~~  111 (113)
T PF13536_consen   47 VAYLLFFYALSYAP-ALVAAIFS-LSPIFTALLSWLFFKE--RLSPRRW----LAILLILIGVILIAWSDLTG  111 (113)
T ss_pred             HHHHHHHHHHHhCc-HHHHHHHH-HHHHHHHHHHHHHhcC--CCCHHHH----HHHHHHHHHHHHHhhhhccc
Confidence            44556678888888 46666555 5888888899999997  6666654    57788889999988665443

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=82.59  E-value=5.7  Score=34.78  Aligned_cols=72  Identities=14%  Similarity=0.248  Sum_probs=51.7

Q ss_pred             HHHHHHHHHHHhccccceeeccceeehhHHHHhhhhhhhhcccCCCChhhHHHHHHHHHHHhhheeeeccccCCC
Q 029288           85 VVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE  159 (196)
Q Consensus        85 ~i~Qi~yLNkAL~~fdt~~V~Pvyyv~fT~~~Ii~g~I~f~E~~~~~~~~i~~~~~G~~ii~~GV~lLs~~~~~~  159 (196)
                      ++.|+-| -.|.+.=+-+.-.|++++.=-+.+.+.|.++|+|+.  +..+......|++++++|+++++..++++
T Consensus        70 ~ig~~~~-~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~--t~~~~~~~~~g~~l~l~G~~l~~~~~~~~  141 (290)
T TIGR00776        70 ALGQINQ-FKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWS--TSIQTLLGLLALILIIIGVYLTSRSKDKS  141 (290)
T ss_pred             HhhhhhH-HHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhcc--chHHHHHHHHHHHHHHHhHheEEeccccc
Confidence            3344443 345555556666777775554567788999999987  56677778999999999999998776443

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=82.41  E-value=8.6  Score=31.99  Aligned_cols=71  Identities=8%  Similarity=0.187  Sum_probs=47.1

Q ss_pred             hhHHH--HHHHHHHHHHHHHHHHHHHHhccccceeeccceeehhHHHHhhhhhhhhcccCCCChhhHHHHHHHHHHHhhh
Q 029288           71 YPQTW--FFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSG  148 (196)
Q Consensus        71 ~~~ty--~~l~~lv~t~i~Qi~yLNkAL~~fdt~~V~Pvyyv~fT~~~Ii~g~I~f~E~~~~~~~~i~~~~~G~~ii~~G  148 (196)
                      .+..|  ++....+.+.+.+.-| ++|+++-+++.+.++.| .-...+.+-|.++++|  ..++.++    .|..+++.|
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~s~~~~-~~pv~~~ll~~~~~~E--~~~~~~~----~G~~li~~g  258 (260)
T TIGR00950       187 LSLQWGALLYLGLIGTALAYFLW-NKGLTLVDPSAASILAL-AEPLVALLLGLLILGE--TLSLPQL----IGGALIIAA  258 (260)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCchHHHHHHH-HHHHHHHHHHHHHhCC--CCCHHHH----HHHHHHHHh
Confidence            34455  3344444455555544 99999999999988887 4556666777888888  4455554    566666666


Q ss_pred             e
Q 029288          149 T  149 (196)
Q Consensus       149 V  149 (196)
                      +
T Consensus       259 ~  259 (260)
T TIGR00950       259 V  259 (260)
T ss_pred             c
Confidence            5

>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []

Probab=81.59  E-value=3.5  Score=32.40  Aligned_cols=19  Identities=37%  Similarity=0.553  Sum_probs=10.5

Q ss_pred             hHHHHHHHHHHHhhheeee
Q 029288          134 GIASEICGFITVLSGTIIL  152 (196)
Q Consensus       134 ~i~~~~~G~~ii~~GV~lL  152 (196)
                      .+...+.|..+.+.|+.-+
T Consensus        85 ~~~~~i~g~~~~~~G~~~i  103 (136)
T PF08507_consen   85 SILSIIIGLLLFLVGVIYI  103 (136)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            4455555666666665544

In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	196
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	96.25
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	95.77

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=96.25  E-value=0.0019  Score=50.51  Aligned_cols=67  Identities=18%  Similarity=0.295  Sum_probs=43.9

Q ss_pred             HHHHHHHHHHHHhccccceeeccceeehhHHHHhhhhhhhhcccCCCChhhHHHHHHHHHHHhhheeeecccc
Q 029288           84 CVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATR  156 (196)
Q Consensus        84 t~i~Qi~yLNkAL~~fdt~~V~Pvyyv~fT~~~Ii~g~I~f~E~~~~~~~~i~~~~~G~~ii~~GV~lLs~~~  156 (196)
                      +...-...+++|+++-+.+...|+.-.+=...+.+.|.++|+|  ..++.+    ++|..+++.||++++..+
T Consensus        39 ~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE--~ls~~~----~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQ--RLDLPA----IIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC--------C----HHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCC--CCCHHH----HHHHHHHHHHHHHHhcCC
Confidence            3444467899999999999999996556666778889999998  345554    578889999999997644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=95.77  E-value=0.03  Score=41.57  Aligned_cols=67  Identities=18%  Similarity=0.295  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHHHhccccceeeccceeehhHHHHhhhhhhhhcccCCCChhhHHHHHHHHHHHhhheeeecccc
Q 029288           84 CVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATR  156 (196)
Q Consensus        84 t~i~Qi~yLNkAL~~fdt~~V~Pvyyv~fT~~~Ii~g~I~f~E~~~~~~~~i~~~~~G~~ii~~GV~lLs~~~  156 (196)
                      +...=...+++|+++-|.+.+.|+.=..=...+.+.|.++|+|  ..++.+    .+|..+++.||.+++..+
T Consensus        39 ~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E--~~s~~~----~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQ--RLDLPA----IIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCC--CCCHHH----HHHHHHHHHHHHHHhcCC
Confidence            4444567889999999999999997677777788899999998  445555    578889999999997643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00