Citrus Sinensis ID: 029571

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-
Protein Sequence
MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRNSKINGDFKVTG
Secondary Structure (PSIPRED)
cccEEEEEEEccccccEEEEEEEEEcccEEEEEEEEEEEEEcccccccEEEEEEcccEEEEEEEcccccEEEEEEEEEEEccEEEEEEEEEEccccEEEEEEEEEEEccccEEEEEEEccccEEEEEEEEEccEEEEEEEcccccccccEEEEEEEccccEEEEEEEccccEEEEEEEccccccccEEEEc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEccccccEEEEEEEEcccccEEEEEEEcccEEcccccccEEEEEEEcccEEEEEccccccccEEEEEcEEEEccccEEEEEEEccccccEEEEEEEEEEccccEEEEEEEcccccEEEEEEEccccEEEcccccccccccEEEEEEEcccccEEEEEEEccccEEEEEEEccccccccEEEEc
Coil and Loop (DISEMBL)
mkaslkgryetdkdrGVAAATVAFNAGDVKLRasltdatvvngpslnglalavekpgffivdynvpkkdfrFQFMnsvrvadkplnltyihgrgdnrtileGTLVfdsankvsanhvlgsgncklkYTYVHGGLTTFEQWYDLAKNSWDFAVSRkvygddmfrasYQTSSKALALEWsrnskingdfkvtg
Flexible Loop (DISEMBL)
mkaslkgryetdkdrgvaAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSskalalewsrnskingdfkvtg
Low Complexity Region (SEG)
MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRNSKINGDFKVTG
Disordered region (IsUnstruct)
****************VAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEW**************
Disordered Region (DISOPRED)
******G*********VAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRNSKINGDFKVTG
Disordered Region (DISEMBL)
MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRNSKINGDFKVTG
Disordered Region (DISPRO)
MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRNSKINGDFKVT*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRNSKINGDFKVTG
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	191	2.2.26 [Sep-21-2011]
Q8H0Y1	213	Outer envelope pore prote	yes	no	0.984	0.882	0.701	2e-77
O49929	213	Outer envelope pore prote	N/A	no	0.994	0.892	0.738	3e-77
Q1H5C9	213	Outer envelope pore prote	no	no	0.989	0.887	0.675	1e-74
B8ANR3	224	Outer envelope pore prote	N/A	no	0.989	0.843	0.492	2e-49
Q75IQ4	224	Outer envelope pore prote	yes	no	0.989	0.843	0.492	5e-49

>sp|Q8H0Y1|OP24B_ARATH Outer envelope pore protein 24B, chloroplastic OS=Arabidopsis thaliana GN=OEP24B PE=1 SV=1

 Score =  287 bits (735), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 134/191 (70%), Positives = 163/191 (85%), Gaps = 3/191 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKAS+KG+Y+TDK  G+   ++AFNAGD+KLRA++TDAT+V GP+L GLALAVEKPG FI
Sbjct: 3   MKASIKGKYDTDKTSGIG--SLAFNAGDIKLRATMTDATLVAGPTLTGLALAVEKPGSFI 60

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           V+YNVPKKD RFQFMN+VR+A+KPLNLTYIH R DNRTI++G+LV DSANK+SANH++G+
Sbjct: 61  VEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 120

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
            NCK+KYTY HGGL TFE  YDLAKN+WDFAVSR+ Y  D  RA+YQTSSK L +EWSRN
Sbjct: 121 NNCKIKYTYAHGGLATFEPCYDLAKNTWDFAVSRRFYSGDNVRATYQTSSKLLGMEWSRN 180

Query: 181 SKINGDFKVTG 191
           +K +G FKV  
Sbjct: 181 NKASG-FKVCA 190

High-conductance voltage-dependent solute channel with a slight selectivity for cations transporting triosephosphates, dicarboxylic acids, ATP, inorganic phosphate (Pi), sugars, and positively or negatively charged amino acids.
Arabidopsis thaliana (taxid: 3702)

>sp|O49929|OEP24_PEA Outer envelope pore protein 24, chloroplastic OS=Pisum sativum GN=OEP24 PE=1 SV=1

 Score =  287 bits (734), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 141/191 (73%), Positives = 158/191 (82%), Gaps = 1/191 (0%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKA+LKG+Y+ D +    AATVAFNAGDVKLRAS+TDAT  N PSL GL LAVEKPG F 
Sbjct: 1   MKAALKGKYDLDHNSS-GAATVAFNAGDVKLRASITDATFKNSPSLTGLVLAVEKPGSFS 59

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           VDYNVPKKDFRFQFMN+VRVA+KPLNL YIH +GDNRTIL+GTLV+D +NKVSAN+ + S
Sbjct: 60  VDYNVPKKDFRFQFMNTVRVAEKPLNLAYIHSKGDNRTILDGTLVWDPSNKVSANYAVES 119

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
           GNCKLKY+Y H GLTT E  YD+AKNSWDFAVS KVYGDD  +ASYQTSSK L LEW+RN
Sbjct: 120 GNCKLKYSYNHKGLTTIEPTYDVAKNSWDFAVSGKVYGDDSLKASYQTSSKVLGLEWTRN 179

Query: 181 SKINGDFKVTG 191
           SK  G FKV  
Sbjct: 180 SKQTGCFKVVA 190

High-conductance voltage-dependent solute channel with a slight selectivity for cations transporting triosephosphates, dicarboxylic acids, ATP, inorganic phosphate (Pi), sugars, and positively or negatively charged amino acids.

Pisum sativum (taxid: 3888)

>sp|Q1H5C9|OP24A_ARATH Outer envelope pore protein 24A, chloroplastic OS=Arabidopsis thaliana GN=OEP24A PE=1 SV=1

 Score =  279 bits (713), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 129/191 (67%), Positives = 157/191 (82%), Gaps = 2/191 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKAS KG+++ DK   VA+ T  FNAG+ KLRA++TDA+ V GPS NGL+LAVEKPGFFI
Sbjct: 2   MKASFKGKFDVDKSGSVASLT--FNAGNAKLRATMTDASFVAGPSFNGLSLAVEKPGFFI 59

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           +DYNVPKKD RFQFMN++R+A+KPLNLTYIH RGDNRTI++G+ V D ANK+SAN+++G+
Sbjct: 60  IDYNVPKKDVRFQFMNTIRIAEKPLNLTYIHMRGDNRTIVDGSFVIDPANKLSANYMVGT 119

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
            NCKLKYTYVHGG+ TFE  YD+AKN WDFA+S K+YG D  +A+YQTSSK L LEWS N
Sbjct: 120 KNCKLKYTYVHGGIATFEPCYDVAKNMWDFAISHKLYGGDNLKATYQTSSKMLGLEWSNN 179

Query: 181 SKINGDFKVTG 191
           SK  G FKV  
Sbjct: 180 SKSTGSFKVCA 190

High-conductance voltage-dependent solute channel with a slight selectivity for cations transporting triosephosphates, dicarboxylic acids, ATP, inorganic phosphate (Pi), sugars, and positively or negatively charged amino acids.

Arabidopsis thaliana (taxid: 3702)

>sp|B8ANR3|OEP24_ORYSI Outer envelope pore protein 24, chloroplastic OS=Oryza sativa subsp. indica GN=OEP24 PE=3 SV=1

 Score =  195 bits (495), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 98/199 (49%), Positives = 128/199 (64%), Gaps = 10/199 (5%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKA++KGRYE DK    A      +A D++ +AS TDA    GPSL GL L +EKPG F+
Sbjct: 1   MKATVKGRYEGDKATAAATLAFTPSAADLRFKASATDAAFARGPSLEGLTLTLEKPGSFL 60

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIH--------GRGDNRTILEGTLVFDSANKV 112
           +D     KD RFQFMNS  + D+ ++LTY H         +   RT L+G+L FD ANK+
Sbjct: 61  LDLKPHSKDVRFQFMNSALLLDRRVSLTYTHSTTLSPGPAKPPARTALDGSLTFDPANKL 120

Query: 113 SANHVLGSGNCKLKYTYVHGG--LTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSS 170
           S +H LGS  C++KY+Y HG   LTT E  +D A N+WDFAV+RK  G D  +A+YQ S+
Sbjct: 121 SLSHTLGSSGCRVKYSYAHGQDRLTTIEPCFDTANNAWDFAVTRKFQGGDAIKATYQAST 180

Query: 171 KALALEWSRNSKINGDFKV 189
           K LAL+W+R+SKI   FKV
Sbjct: 181 KLLALDWTRDSKIGASFKV 199

High-conductance voltage-dependent solute channel with a slight selectivity for cations transporting triosephosphates, dicarboxylic acids, ATP, inorganic phosphate (Pi), sugars, and positively or negatively charged amino acids.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q75IQ4|OEP24_ORYSJ Outer envelope pore protein 24, chloroplastic OS=Oryza sativa subsp. japonica GN=OEP24 PE=2 SV=1

 Score =  193 bits (491), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 98/199 (49%), Positives = 128/199 (64%), Gaps = 10/199 (5%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKA++KGRYE DK    A      +A D++ +AS TDA    GPSL GL L +EKPG F+
Sbjct: 1   MKATVKGRYEGDKATAAATLAFTPSAADLRFKASATDAAFARGPSLEGLILTLEKPGSFL 60

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIH--------GRGDNRTILEGTLVFDSANKV 112
           +D     KD RFQFMNS  + D+ ++LTY H         +   RT L+G+L FD ANK+
Sbjct: 61  LDLKPHSKDVRFQFMNSALLLDRRVSLTYTHSTTLSPGPAKLPARTALDGSLTFDPANKL 120

Query: 113 SANHVLGSGNCKLKYTYVHGG--LTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSS 170
           S +H LGS  C++KY+Y HG   LTT E  +D A N+WDFAV+RK  G D  +A+YQ S+
Sbjct: 121 SLSHTLGSSGCRVKYSYAHGQDRLTTIEPCFDTANNAWDFAVTRKFQGGDAIKATYQAST 180

Query: 171 KALALEWSRNSKINGDFKV 189
           K LAL+W+R+SKI   FKV
Sbjct: 181 KLLALDWTRDSKIGASFKV 199

High-conductance voltage-dependent solute channel with a slight selectivity for cations transporting triosephosphates, dicarboxylic acids, ATP, inorganic phosphate (Pi), sugars, and positively or negatively charged amino acids.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	191
224132122	212	hypothetical protein POPTRDRAFT_573245 [	0.989	0.891	0.821	9e-88
255538596	213	conserved hypothetical protein [Ricinus	0.979	0.877	0.809	1e-84
449460110	212	PREDICTED: outer envelope pore protein 2	0.989	0.891	0.769	3e-82
356552120	214	PREDICTED: uncharacterized protein LOC10	0.984	0.878	0.736	2e-76
363807866	214	uncharacterized protein LOC100785739 [Gl	0.984	0.878	0.731	1e-75
18422277	213	uncharacterized protein [Arabidopsis tha	0.984	0.882	0.701	1e-75
9758585	211	unnamed protein product [Arabidopsis tha	0.984	0.890	0.701	1e-75
297852260	214	F27F5.25 [Arabidopsis lyrata subsp. lyra	0.989	0.883	0.696	1e-75
116831573	214	unknown [Arabidopsis thaliana]	0.973	0.869	0.708	1e-75
75098940	213	RecName: Full=Outer envelope pore protei	0.994	0.892	0.738	2e-75

>gi|224132122|ref|XP_002321261.1| hypothetical protein POPTRDRAFT_573245 [Populus trichocarpa] gi|222862034|gb|EEE99576.1| hypothetical protein POPTRDRAFT_573245 [Populus trichocarpa]

 Score =  328 bits (840), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 157/191 (82%), Positives = 173/191 (90%), Gaps = 2/191 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKASLKG+Y  D D+   AATVAFNAGDVKLRAS+TDATVVNGPSLNGLALAVEKPGFFI
Sbjct: 1   MKASLKGKY--DNDKSSTAATVAFNAGDVKLRASITDATVVNGPSLNGLALAVEKPGFFI 58

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           +DYNVPKKDFRFQFMNSV+V DKPLNLTYIH RGDNRTIL+GTLV DSANK+SAN++LG+
Sbjct: 59  IDYNVPKKDFRFQFMNSVKVVDKPLNLTYIHCRGDNRTILDGTLVVDSANKISANYMLGT 118

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
            NCKLKYTYVHGGLT+FEQ YD AKNSWDFA SRKVYGDD+ RA YQTSSK L +EWSRN
Sbjct: 119 ENCKLKYTYVHGGLTSFEQCYDFAKNSWDFAGSRKVYGDDVLRAVYQTSSKNLGMEWSRN 178

Query: 181 SKINGDFKVTG 191
           SK+NG+FKV+ 
Sbjct: 179 SKLNGNFKVSA 189

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538596|ref|XP_002510363.1| conserved hypothetical protein [Ricinus communis] gi|223551064|gb|EEF52550.1| conserved hypothetical protein [Ricinus communis]

 Score =  317 bits (813), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 153/189 (80%), Positives = 169/189 (89%), Gaps = 2/189 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKASLKGRYETDK    AA      AGDVKLRAS+TDATVV GPSLNGL LAVEKPGFF+
Sbjct: 2   MKASLKGRYETDKSSAAAAVAFN--AGDVKLRASMTDATVVKGPSLNGLVLAVEKPGFFM 59

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           VDYNVPKKDFRFQFM++++VADKPLNLTYIH RGDNRT+L+G LV DSANK++ANH+LGS
Sbjct: 60  VDYNVPKKDFRFQFMSTIKVADKPLNLTYIHSRGDNRTVLDGALVLDSANKLAANHILGS 119

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
           GNCKLKYTYVHGG+TTFE  YDLAKNSWDFAVSRKVY DD+FRA+YQTSSKAL LEWSRN
Sbjct: 120 GNCKLKYTYVHGGVTTFEPCYDLAKNSWDFAVSRKVYADDVFRATYQTSSKALGLEWSRN 179

Query: 181 SKINGDFKV 189
           SK NG+FK+
Sbjct: 180 SKFNGNFKI 188

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460110|ref|XP_004147789.1| PREDICTED: outer envelope pore protein 24B, chloroplastic-like [Cucumis sativus] gi|449476784|ref|XP_004154833.1| PREDICTED: outer envelope pore protein 24B, chloroplastic-like [Cucumis sativus]

 Score =  309 bits (792), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 147/191 (76%), Positives = 169/191 (88%), Gaps = 2/191 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKA+LK +Y  D D+  AA+T+A NAGDVKLRAS+TDAT++NGPSLNGLAL+VEKPGFFI
Sbjct: 1   MKATLKTKY--DADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALSVEKPGFFI 58

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           VDYNVPKKD RFQFMN+V+VA+KPLNLTYIH   D+RTIL+GTLVFDSANKVSANH LGS
Sbjct: 59  VDYNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADSRTILDGTLVFDSANKVSANHALGS 118

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
           GNCKLKYTYVH G TTFE  YD+AKNSWDFAVSRKVYGDD+F+A+YQT+SK L LEW+RN
Sbjct: 119 GNCKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKVLGLEWTRN 178

Query: 181 SKINGDFKVTG 191
            K +G+FKV  
Sbjct: 179 LKSSGNFKVVA 189

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552120|ref|XP_003544418.1| PREDICTED: uncharacterized protein LOC100802815 [Glycine max]

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 140/190 (73%), Positives = 161/190 (84%), Gaps = 2/190 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKA+LKG+Y+ DK+ G A A +A NAGDVK RAS+T+AT +NGPSL GLALAVEKPG FI
Sbjct: 1   MKATLKGKYDVDKN-GAAFANIAVNAGDVKFRASVTEATFINGPSLTGLALAVEKPGSFI 59

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           VDYNVPKKDFRFQFMN+VRV ++PLNLTY H RGDNRT+L+GT V+DSANKVSAN+ L S
Sbjct: 60  VDYNVPKKDFRFQFMNTVRVGERPLNLTYAHSRGDNRTVLDGTFVYDSANKVSANYALDS 119

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVY-GDDMFRASYQTSSKALALEWSR 179
           GNCKLKYTYVH GLTTFE  YD+AKN+WDFAVSR+VY GDD  RASYQTSS+ L +EWSR
Sbjct: 120 GNCKLKYTYVHKGLTTFEPAYDVAKNTWDFAVSRRVYGGDDTLRASYQTSSRVLGVEWSR 179

Query: 180 NSKINGDFKV 189
           N K    FK+
Sbjct: 180 NPKHTAGFKI 189

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807866|ref|NP_001242188.1| uncharacterized protein LOC100785739 [Glycine max] gi|255647198|gb|ACU24067.1| unknown [Glycine max]

 Score =  288 bits (736), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 139/190 (73%), Positives = 159/190 (83%), Gaps = 2/190 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKA+LKG+Y+ DK+ G A A +A NAGDVK RAS+T+AT +NGPS  GLALAVEKPG FI
Sbjct: 1   MKATLKGKYDVDKN-GAAFANIAVNAGDVKFRASVTEATFINGPSFTGLALAVEKPGSFI 59

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           VDYNVPKKDFRFQFMN+VRV ++PLNLTY H RGDNRT+L+GT V+DSANKVSAN+ L S
Sbjct: 60  VDYNVPKKDFRFQFMNTVRVGERPLNLTYAHSRGDNRTVLDGTFVYDSANKVSANYALDS 119

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVY-GDDMFRASYQTSSKALALEWSR 179
           GNCKLKYTYVH GLTTFE  YD+AKN+WDFAVSR+VY GDD  RASYQTSS  L +EWSR
Sbjct: 120 GNCKLKYTYVHKGLTTFEPAYDVAKNTWDFAVSRRVYGGDDTLRASYQTSSTVLGVEWSR 179

Query: 180 NSKINGDFKV 189
           N K    FK+
Sbjct: 180 NPKHTAGFKI 189

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18422277|ref|NP_568618.1| uncharacterized protein [Arabidopsis thaliana] gi|75151846|sp|Q8H0Y1.1|OP24B_ARATH RecName: Full=Outer envelope pore protein 24B, chloroplastic; AltName: Full=Chloroplastic outer envelope pore protein of 24 kDa B gi|24899671|gb|AAN65050.1| Unknown protein [Arabidopsis thaliana] gi|98961909|gb|ABF59284.1| unknown protein [Arabidopsis thaliana] gi|332007511|gb|AED94894.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  287 bits (735), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 134/191 (70%), Positives = 163/191 (85%), Gaps = 3/191 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKAS+KG+Y+TDK  G+   ++AFNAGD+KLRA++TDAT+V GP+L GLALAVEKPG FI
Sbjct: 3   MKASIKGKYDTDKTSGIG--SLAFNAGDIKLRATMTDATLVAGPTLTGLALAVEKPGSFI 60

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           V+YNVPKKD RFQFMN+VR+A+KPLNLTYIH R DNRTI++G+LV DSANK+SANH++G+
Sbjct: 61  VEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 120

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
            NCK+KYTY HGGL TFE  YDLAKN+WDFAVSR+ Y  D  RA+YQTSSK L +EWSRN
Sbjct: 121 NNCKIKYTYAHGGLATFEPCYDLAKNTWDFAVSRRFYSGDNVRATYQTSSKLLGMEWSRN 180

Query: 181 SKINGDFKVTG 191
           +K +G FKV  
Sbjct: 181 NKASG-FKVCA 190

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9758585|dbj|BAB09198.1| unnamed protein product [Arabidopsis thaliana]

 Score =  287 bits (735), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 134/191 (70%), Positives = 163/191 (85%), Gaps = 3/191 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKAS+KG+Y+TDK  G+ +  +AFNAGD+KLRA++TDAT+V GP+L GLALAVEKPG FI
Sbjct: 1   MKASIKGKYDTDKTSGIGS--LAFNAGDIKLRATMTDATLVAGPTLTGLALAVEKPGSFI 58

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           V+YNVPKKD RFQFMN+VR+A+KPLNLTYIH R DNRTI++G+LV DSANK+SANH++G+
Sbjct: 59  VEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 118

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
            NCK+KYTY HGGL TFE  YDLAKN+WDFAVSR+ Y  D  RA+YQTSSK L +EWSRN
Sbjct: 119 NNCKIKYTYAHGGLATFEPCYDLAKNTWDFAVSRRFYSGDNVRATYQTSSKLLGMEWSRN 178

Query: 181 SKINGDFKVTG 191
           +K +G FKV  
Sbjct: 179 NKASG-FKVCA 188

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297852260|ref|XP_002894011.1| F27F5.25 [Arabidopsis lyrata subsp. lyrata] gi|297339853|gb|EFH70270.1| F27F5.25 [Arabidopsis lyrata subsp. lyrata]

 Score =  287 bits (735), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 133/191 (69%), Positives = 162/191 (84%), Gaps = 2/191 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKAS KG+++ D   GVA  +++FNAG+ KLRA++TD ++V GPSLNGL+LAVEKPGFFI
Sbjct: 3   MKASFKGKFDVDNSGGVA--SLSFNAGNAKLRATMTDTSLVAGPSLNGLSLAVEKPGFFI 60

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           +DYNVPKKD RFQFMN+VR+A+KPLNLTYIH RGDNRTI++G+LV D ANK+SAN+++G+
Sbjct: 61  IDYNVPKKDVRFQFMNTVRIAEKPLNLTYIHMRGDNRTIVDGSLVIDPANKLSANYMVGT 120

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
            NCKLKYTYVHGG+ TFE  YDLAKN WDFAVSRK+YG D  +A+YQTSSK L LEWSRN
Sbjct: 121 KNCKLKYTYVHGGIATFEPCYDLAKNVWDFAVSRKLYGGDNLKATYQTSSKMLGLEWSRN 180

Query: 181 SKINGDFKVTG 191
           S+  G FKV  
Sbjct: 181 SQSTGSFKVCA 191

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116831573|gb|ABK28739.1| unknown [Arabidopsis thaliana]

 Score =  287 bits (734), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 134/189 (70%), Positives = 163/189 (86%), Gaps = 3/189 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKAS+KG+Y+TDK  G+   ++AFNAGD+KLRA++TDAT+V GP+L GLALAVEKPG FI
Sbjct: 3   MKASIKGKYDTDKTSGIG--SLAFNAGDIKLRATMTDATLVAGPTLTGLALAVEKPGSFI 60

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           V+YNVPKKD RFQFMN+VR+A+KPLNLTYIH R DNRTI++G+LV DSANK+SANH++G+
Sbjct: 61  VEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 120

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
            NCK+KYTY HGGL TFE  YDLAKN+WDFAVSR+ Y  D  RA+YQTSSK L +EWSRN
Sbjct: 121 NNCKIKYTYAHGGLATFEPCYDLAKNTWDFAVSRRFYSGDNVRATYQTSSKLLGMEWSRN 180

Query: 181 SKINGDFKV 189
           +K +G FKV
Sbjct: 181 NKASG-FKV 188

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|75098940|sp|O49929.1|OEP24_PEA RecName: Full=Outer envelope pore protein 24, chloroplastic; AltName: Full=Chloroplastic outer envelope pore protein of 24 kDa gi|2764574|emb|CAA04468.1| pore protein of 24 kD (OEP24) [Pisum sativum]

 Score =  287 bits (734), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 141/191 (73%), Positives = 158/191 (82%), Gaps = 1/191 (0%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKA+LKG+Y+ D +    AATVAFNAGDVKLRAS+TDAT  N PSL GL LAVEKPG F 
Sbjct: 1   MKAALKGKYDLDHNSS-GAATVAFNAGDVKLRASITDATFKNSPSLTGLVLAVEKPGSFS 59

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           VDYNVPKKDFRFQFMN+VRVA+KPLNL YIH +GDNRTIL+GTLV+D +NKVSAN+ + S
Sbjct: 60  VDYNVPKKDFRFQFMNTVRVAEKPLNLAYIHSKGDNRTILDGTLVWDPSNKVSANYAVES 119

Query: 121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
           GNCKLKY+Y H GLTT E  YD+AKNSWDFAVS KVYGDD  +ASYQTSSK L LEW+RN
Sbjct: 120 GNCKLKYSYNHKGLTTIEPTYDVAKNSWDFAVSGKVYGDDSLKASYQTSSKVLGLEWTRN 179

Query: 181 SKINGDFKVTG 191
           SK  G FKV  
Sbjct: 180 SKQTGCFKVVA 190

Source: Pisum sativum

Species: Pisum sativum

Genus: Pisum

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	191
UNIPROTKB|O49929	213	OEP24 "Outer envelope pore pro	0.984	0.882	0.746	8.6e-72
TAIR|locus:2160051	213	AT5G42960 "AT5G42960" [Arabido	0.973	0.873	0.708	1.8e-71
TAIR|locus:2028210	213	AT1G45170 "AT1G45170" [Arabido	0.979	0.877	0.682	2.4e-69

UNIPROTKB|O49929 OEP24 "Outer envelope pore protein 24, chloroplastic" [Pisum sativum (taxid:3888)]

 Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
 Identities = 141/189 (74%), Positives = 158/189 (83%)

Query:     1 MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
             MKA+LKG+Y+ D +    AATVAFNAGDVKLRAS+TDAT  N PSL GL LAVEKPG F 
Sbjct:     1 MKAALKGKYDLDHNSS-GAATVAFNAGDVKLRASITDATFKNSPSLTGLVLAVEKPGSFS 59

Query:    61 VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
             VDYNVPKKDFRFQFMN+VRVA+KPLNL YIH +GDNRTIL+GTLV+D +NKVSAN+ + S
Sbjct:    60 VDYNVPKKDFRFQFMNTVRVAEKPLNLAYIHSKGDNRTILDGTLVWDPSNKVSANYAVES 119

Query:   121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
             GNCKLKY+Y H GLTT E  YD+AKNSWDFAVS KVYGDD  +ASYQTSSK L LEW+RN
Sbjct:   120 GNCKLKYSYNHKGLTTIEPTYDVAKNSWDFAVSGKVYGDDSLKASYQTSSKVLGLEWTRN 179

Query:   181 SKINGDFKV 189
             SK  G FKV
Sbjct:   180 SKQTGCFKV 188

GO:0015288 "porin activity" evidence=IDA

GO:0022843 "voltage-gated cation channel activity" evidence=IDA

GO:0031359 "integral to chloroplast outer membrane" evidence=IDA

GO:0034426 "etioplast membrane" evidence=IDA

GO:0034765 "regulation of ion transmembrane transport" evidence=IDA

GO:0046930 "pore complex" evidence=IDA

TAIR|locus:2160051 AT5G42960 "AT5G42960" [Arabidopsis thaliana (taxid:3702)]

 Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
 Identities = 134/189 (70%), Positives = 163/189 (86%)

Query:     1 MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
             MKAS+KG+Y+TDK  G+ +  +AFNAGD+KLRA++TDAT+V GP+L GLALAVEKPG FI
Sbjct:     3 MKASIKGKYDTDKTSGIGS--LAFNAGDIKLRATMTDATLVAGPTLTGLALAVEKPGSFI 60

Query:    61 VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
             V+YNVPKKD RFQFMN+VR+A+KPLNLTYIH R DNRTI++G+LV DSANK+SANH++G+
Sbjct:    61 VEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 120

Query:   121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
              NCK+KYTY HGGL TFE  YDLAKN+WDFAVSR+ Y  D  RA+YQTSSK L +EWSRN
Sbjct:   121 NNCKIKYTYAHGGLATFEPCYDLAKNTWDFAVSRRFYSGDNVRATYQTSSKLLGMEWSRN 180

Query:   181 SKINGDFKV 189
             +K +G FKV
Sbjct:   181 NKASG-FKV 188

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2028210 AT1G45170 "AT1G45170" [Arabidopsis thaliana (taxid:3702)]

 Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
 Identities = 129/189 (68%), Positives = 157/189 (83%)

Query:     1 MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
             MKAS KG+++ DK   VA+ T  FNAG+ KLRA++TDA+ V GPS NGL+LAVEKPGFFI
Sbjct:     2 MKASFKGKFDVDKSGSVASLT--FNAGNAKLRATMTDASFVAGPSFNGLSLAVEKPGFFI 59

Query:    61 VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
             +DYNVPKKD RFQFMN++R+A+KPLNLTYIH RGDNRTI++G+ V D ANK+SAN+++G+
Sbjct:    60 IDYNVPKKDVRFQFMNTIRIAEKPLNLTYIHMRGDNRTIVDGSFVIDPANKLSANYMVGT 119

Query:   121 GNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGDDMFRASYQTSSKALALEWSRN 180
              NCKLKYTYVHGG+ TFE  YD+AKN WDFA+S K+YG D  +A+YQTSSK L LEWS N
Sbjct:   120 KNCKLKYTYVHGGIATFEPCYDVAKNMWDFAISHKLYGGDNLKATYQTSSKMLGLEWSNN 179

Query:   181 SKINGDFKV 189
             SK  G FKV
Sbjct:   180 SKSTGSFKV 188


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.133   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      191       191   0.00094  110 3  11 22  0.46    32
                                                     31  0.43    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  168 KB (2098 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.20u 0.10s 16.30t   Elapsed:  00:00:01
  Total cpu time:  16.20u 0.10s 16.30t   Elapsed:  00:00:01
  Start:  Sat May 11 02:51:49 2013   End:  Sat May 11 02:51:50 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0045036 "protein targeting to chloroplast" evidence=RCA

GO:0009536 "plastid" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O49929	OEP24_PEA	No assigned EC number	0.7382	0.9947	0.8920	N/A	no
Q75IQ4	OEP24_ORYSJ	No assigned EC number	0.4924	0.9895	0.8437	yes	no
Q8H0Y1	OP24B_ARATH	No assigned EC number	0.7015	0.9842	0.8826	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00141290 hypothetical protein (212 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	191
cd02861	82	E_set_proteins_like E or "early" set-like proteins	81.1
TIGR01981	366	sufD FeS assembly protein SufD, group 1. This prot	80.33

>cd02861 E_set_proteins_like E or "early" set-like proteins

Probab=81.10  E-value=10  Score=26.75  Aligned_cols=68  Identities=19%  Similarity=0.422  Sum_probs=44.2

Q ss_pred             cCceEEeeeeeceeeecCCCccceEEEeecCceEEEeecCCCCCeeEEeeeeeeecceeeeeEEeeecCCceeEEeeeEE
Q 029571           26 AGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLV  105 (191)
Q Consensus        26 aGDlkLrAs~TDatfv~GpSL~GlsL~vEKPGsF~iDy~vp~~d~RFQFmn~~~v~~K~lnlTY~H~~~~nrT~lDgtl~  105 (191)
                      |..|.|..+..+-.        .+.|.-++.|.|.+...+|.-.-+|+|                        ++||...
T Consensus        13 a~~V~v~G~fn~W~--------~~~m~~~~~G~w~~~~~l~~G~y~Ykf------------------------~vdg~~~   60 (82)
T cd02861          13 ADSVYLAGSFNNWN--------AIPMEREGDGLWVVTVELRPGRYEYKF------------------------VVDGEWV   60 (82)
T ss_pred             CCEEEEEeECCCCC--------cccCEECCCCcEEEEEeCCCCcEEEEE------------------------EECCEEe
Confidence            45566666655432        233443445889988888887778888                        4566655


Q ss_pred             -eecCCceeeeEEecCCceeE
Q 029571          106 -FDSANKVSANHVLGSGNCKL  125 (191)
Q Consensus       106 -~D~aNKls~~y~f~s~~ckl  125 (191)
                       .||.|.-...=.|+..||-|
T Consensus        61 ~~DP~~~~~~~~~~g~~n~v~   81 (82)
T cd02861          61 IVDPNAAAYVDDGFGGKNAVF   81 (82)
T ss_pred             eCCCCCCceecCCCCccceEc
Confidence             78888776666666666543

These alpha amylase-like sugar utilizing enzymes which may be related to the immunoglobulin and/or fibronectin type III superfamilies are associated with different types of catalytic domains at either the N-terminal or C-terminal end. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.

>TIGR01981 sufD FeS assembly protein SufD, group 1

Probab=80.33  E-value=8.1  Score=34.76  Aligned_cols=131  Identities=20%  Similarity=0.262  Sum_probs=75.8

Q ss_pred             ceeeecCCCccceEEEeecCceEEEee----cCCCCCeeEEeeeeeee-------------cceeeeeEEeeecCCc---
Q 029571           37 DATVVNGPSLNGLALAVEKPGFFIVDY----NVPKKDFRFQFMNSVRV-------------ADKPLNLTYIHGRGDN---   96 (191)
Q Consensus        37 Datfv~GpSL~GlsL~vEKPGsF~iDy----~vp~~d~RFQFmn~~~v-------------~~K~lnlTY~H~~~~n---   96 (191)
                      ...|++|..+..|+-.+++|.-..++|    .++.++-+|..+|.+..             .++|+.+.|+...+.+   
T Consensus        44 ~lv~~~G~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~aln~a~~~~G~~i~v~~~~~~~~Pi~i~~~~~~~~~~~~  123 (366)
T TIGR01981        44 RLVFVDGVIVPDLSDALPLHPELLEDLLDALAVLSDEDRFLALNAALFNDGTVLYVPKGVEVEEPIEIKFIGVGGEKNFV  123 (366)
T ss_pred             eEEEECCEEecChhhhhccCcceEEeehhcccCcCCccHHHHHHHHHhCCeEEEEECCCCCcCCCEEEEEEEcCCCccce
Confidence            577999999888888888998888888    45555666766665532             5699999998864322   


Q ss_pred             -------------eeEEeeeEEeecCCc--ee--eeEEecCCceeEEEEEEeCCeeeeeeeeccccceeeeEEEeeecCC
Q 029571           97 -------------RTILEGTLVFDSANK--VS--ANHVLGSGNCKLKYTYVHGGLTTFEQWYDLAKNSWDFAVSRKVYGD  159 (191)
Q Consensus        97 -------------rT~lDgtl~~D~aNK--ls--~~y~f~s~~cklKYsYvH~g~tT~EP~yD~~~nsWdfavsrkv~g~  159 (191)
                                   .|+++.-...++.+.  ++  ....+-..|-+|+|..+|.          .+.+++.|+-.+-..+.
T Consensus       124 ~~~~~i~v~~~s~~~iie~~~~~~~~~~~~~~~~~~ei~~~~~A~l~~~~iq~----------~~~~~~~~~~~~~~~~~  193 (366)
T TIGR01981       124 HPRLLIIVEKGSKITVIERFETISLNSGKAFTNSVVEITVGANASVIFVKVQF----------FSKNSTHFSNHRAFIGR  193 (366)
T ss_pred             eeEEEEEECCCCEEEEEEEecCCCCCCcccEEEEEEEEEECCCCEEEEEEEEc----------CCCCcEEEEEeEEEEcC
Confidence                         222222222222221  11  2222333556666666654          35678888755544444


Q ss_pred             CeeEEEEeecceeEEEEEecC
Q 029571          160 DMFRASYQTSSKALALEWSRN  180 (191)
Q Consensus       160 d~~katYq~s~k~lGleWsR~  180 (191)
                      |.   .|+...=.+|=.++|.
T Consensus       194 ~a---~~~~~~~~~gg~~~r~  211 (366)
T TIGR01981       194 DA---TLRLAVVNLGGKLSRH  211 (366)
T ss_pred             CC---EEEEEEEEcCCccEEE
Confidence            43   2222333455555554

This protein, SufD, forms a cytosolic complex SufBCD. This complex enhances the cysteine desulfurase of SufSE. The system, together with SufA, is believed to act in iron-sulfur cluster formation during oxidative stress. SufB and SufD are homologous. Note that SufC belongs to the family of ABC transporter ATP binding proteins, so this protein, encoded by an adjacent gene, has often been annotated as a transporter component.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00