Citrus Sinensis ID: 029752

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------19
Protein Sequence
MAEKPQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQSTGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIEDGKKVPAV
Secondary Structure (PSIPRED)
cccccccEEEEEccccccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHcccccccccccccEEEEEEEEEcccEEEEEEEccccccccHHHHHHHHHHHcccccEEEEccccccEEEEcccHHHHHHHHHHHHccccccccEEEcccccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEccccccccHHHcccccHHHHHHHHHHHcHHHHHHHccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEccccEEEEEEEcHHHccccHHHHHHHHHHHcccccEEEEccccccEEEEEcccHHHHHHHHHHHcccccHHHHHEHccccccccc
Coil and Loop (DISEMBL)
maekpqpvRVLYCAVCslpaeycefgpdlekckpwliqntpdlYPDLAEELNSREADKVGEQLqstgisspassapkaeevkhlpggkikkkdkkEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKkfatgasvvkgptekeqidvqgdISYDIVEFItdtwpdvpeTAIFFIedgkkvpav
Flexible Loop (DISEMBL)
maekpqpvrVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQSTgisspassapkaeevkhlpggkikkkdkkevviekvvrnkrkcittvkglelfgvklsdasKKLGKKfatgasvvkgptekeqidvqgDISYDIVEFITDTWPDVPETAIFfiedgkkvpav
Low Complexity Region (SEG)
MAEKPQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQSTGIsspassapKAEEVKHLPGGkikkkdkkevviekvvrnkrkCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIEDGKKVPAV
Disordered region (IsUnstruct)
*******VRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYP***************************************************VVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVK*****EQIDVQGDISYDIVEFITDTWPDVPETAIFFIE********
Disordered Region (DISOPRED)
****PQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDL***************************************************IEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIE*GKK****
Disordered Region (DISEMBL)
MAEKPQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREAD************************KHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIEDGKKVPAV
Disordered Region (DISPRO)
****PQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREAD**********************************KDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIEDGK*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAEKPQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQSTGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIEDGKKVPAV
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	188	2.2.26 [Sep-21-2011]
O42929	190	Translation machinery-ass	yes	no	0.952	0.942	0.402	6e-30
Q2H5Z7	188	Translation machinery-ass	N/A	no	0.936	0.936	0.413	6e-29
Q9P3T4	187	Translation machinery-ass	N/A	no	0.898	0.903	0.416	3e-28
A4QVI3	201	Translation machinery-ass	N/A	no	0.930	0.870	0.414	1e-27
Q2TVZ2	194	Translation machinery-ass	yes	no	0.920	0.891	0.385	2e-27
A1DAY1	194	Translation machinery-ass	N/A	no	0.930	0.902	0.401	4e-27
Q1E556	200	Translation machinery-ass	N/A	no	0.914	0.86	0.366	1e-26
Q4WBL6	194	Translation machinery-ass	yes	no	0.930	0.902	0.395	1e-26
A2QHG9	197	Translation machinery-ass	yes	no	0.968	0.923	0.375	1e-26
Q5ZJ39	198	Density-regulated protein	yes	no	0.851	0.808	0.381	3e-26

>sp|O42929|DENR_SCHPO Translation machinery-associated protein 22 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tma22 PE=3 SV=1

 Score =  130 bits (326), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 106/179 (59%)

Query: 5   PQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQ 64
           P+   VLYC VC+LP EYCEF   L+KCK WL  + PD+Y  L  E +  +  +    + 
Sbjct: 7   PKLKSVLYCDVCTLPVEYCEFEGTLKKCKEWLKSSHPDVYDKLYGEQDLSKDLENTLNVS 66

Query: 65  STGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLS 124
            T  S+      K  + +     +  K+   +V+I+ + R KRK +TTV+GL+ FG++  
Sbjct: 67  GTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKRVTTVQGLDAFGIETK 126

Query: 125 DASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIEDGK 183
            A+K L  KFATGASV K   +K++I VQGD++YDI +FI + + +VPE  I  +ED K
Sbjct: 127 KAAKMLANKFATGASVTKTADKKDEIVVQGDLNYDIFDFILEKFKEVPEDNIKIVEDTK 185

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q2H5Z7|DENR_CHAGB Translation machinery-associated protein 22 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=TMA22 PE=3 SV=1

 Score =  127 bits (318), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 79/191 (41%), Positives = 109/191 (57%), Gaps = 15/191 (7%)

Query: 1   MAEKPQPV--RVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLY-----PDLAEELNS 53
           MAE P PV   ++YC VC+LP EYCE+G   +KC+ WL +  PDLY     P+  E   +
Sbjct: 1   MAE-PTPVGREIIYCGVCTLPPEYCEYGGTTKKCQEWLEKKHPDLYARIWSPEALEAATA 59

Query: 54  READKVGEQLQSTGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTV 113
             +    E+         A +    +  KH       K  K  V I+++ RNKRK +T+V
Sbjct: 60  SLSLAAQERAAKDAAKKAAKAEAAEQ--KH-----ADKLAKSVVTIKRIERNKRKFVTSV 112

Query: 114 KGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPE 173
            GLE FG++L   +K  GKKFATGASV K P+  E+I VQGD+S +I EF+ + + D+PE
Sbjct: 113 TGLEAFGLELKKVAKDFGKKFATGASVTKVPSGGEEIVVQGDVSGEIEEFLLEKYKDIPE 172

Query: 174 TAIFFIEDGKK 184
             I  +ED KK
Sbjct: 173 DNIELVEDKKK 183

Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) (taxid: 306901)

>sp|Q9P3T4|DENR_NEUCR Translation machinery-associated protein 22 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=tma-22 PE=3 SV=1

 Score =  124 bits (311), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 105/173 (60%), Gaps = 4/173 (2%)

Query: 10  VLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDL-AEELNSREADKVGEQLQSTGI 68
           V+YC VCSLP EYCE+G  ++KC+ WL +N P +Y  + + E+   E   +  + Q   +
Sbjct: 9   VVYCGVCSLPPEYCEYGGTVKKCQQWLEKNQPTMYSRIWSPEVLEAEMASLSVEAQERAM 68

Query: 69  SSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASK 128
                 A KAE  +     +  K+    V I+++ RNKRK +T+V GLE FG++L   +K
Sbjct: 69  KDAKKKAAKAEAAEQK---QADKRANSVVTIKRIERNKRKYVTSVSGLEAFGLELKKVAK 125

Query: 129 KLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIED 181
             GKKFATG+SV K P+  E+I VQGD+S +I EFI + + +VPE  I  +ED
Sbjct: 126 DFGKKFATGSSVTKVPSGGEEIVVQGDVSGEIEEFILEKYKEVPEDNIELVED 178

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

>sp|A4QVI3|DENR_MAGO7 Translation machinery-associated protein 22 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=TMA22 PE=3 SV=2

 Score =  122 bits (307), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/181 (41%), Positives = 106/181 (58%), Gaps = 6/181 (3%)

Query: 5   PQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDL--AEELNSREADKVGEQ 62
           PQ   V YC VCSLP EYCE+G  ++KC+ WL +N  ++Y  +   E L +  A  +  +
Sbjct: 14  PQGREVTYCGVCSLPPEYCEYGGTVKKCQDWLQRNNQEMYDRIWSPEALQAATA-ALSVE 72

Query: 63  LQSTGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVK 122
            Q          A KAE  +     K+KK     V ++++ RNKRK +T+V GLE FG++
Sbjct: 73  AQQRAEKDAKKKAAKAEAAEAKHADKLKKS---VVTVKRIERNKRKYVTSVSGLESFGLE 129

Query: 123 LSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIEDG 182
           L   +K  GKKFATG+SV K  +  E+I VQGD+S +I EFI + + DVPE  I  ++D 
Sbjct: 130 LKKVAKDFGKKFATGSSVTKVASGGEEIVVQGDVSDEIKEFIVEKYKDVPEDNIELVDDK 189

Query: 183 K 183
           K
Sbjct: 190 K 190

Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) (taxid: 242507)

>sp|Q2TVZ2|DENR_ASPOR Translation machinery-associated protein 22 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=tma22 PE=3 SV=1

 Score =  122 bits (305), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 110/184 (59%), Gaps = 11/184 (5%)

Query: 6   QPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQS 65
           Q   V+YC VC+LP EYCEFG   +KC+ WL +  P+LY    + L+S EA  +   L +
Sbjct: 13  QARHVVYCGVCTLPPEYCEFGGTAKKCEEWLKEKQPELY----QRLHSEEA--ISANLST 66

Query: 66  TGISSPASSAPKAEEVKHLPGGK----IKKKDKKEVVIEKVVRNKRKCITTVKGLELFGV 121
             IS+   +A  A + +           ++K   +V I++V RNKRK +T + GLE++G+
Sbjct: 67  LSISAQERAAKDAAKKEAKAALAEARDAERKAASKVQIKRVERNKRKHVTVIAGLEVYGL 126

Query: 122 KLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW-PDVPETAIFFIE 180
           +    +K+LGKKFATG+SV +     E+I VQGD+S D+ +++ + +  ++PE  I  IE
Sbjct: 127 ENKKVAKELGKKFATGSSVTRSAAGNEEITVQGDVSDDVQDWLLEVYGKEIPEANIEIIE 186

Query: 181 DGKK 184
           D KK
Sbjct: 187 DKKK 190

Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516)

>sp|A1DAY1|DENR_NEOFI Translation machinery-associated protein 22 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tma22 PE=3 SV=1

 Score =  120 bits (302), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 107/182 (58%), Gaps = 7/182 (3%)

Query: 6   QPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREA--DKVGEQL 63
           Q  +V+YC VC+LP EYCEFG   +KC+ WL  N  DLY    + L S EA    + E  
Sbjct: 13  QAKQVVYCGVCTLPPEYCEFGGTAKKCEEWLKDNHADLY----QRLYSEEALSSNLSELS 68

Query: 64  QSTGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKL 123
            S    +   +A K  +         ++K   +V I++V RNKRK +T + GLE+ G++ 
Sbjct: 69  VSVRERAAKDAAKKEAKAAAAEARDAERKAAAKVQIKRVERNKRKHVTVITGLEVHGLEN 128

Query: 124 SDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW-PDVPETAIFFIEDG 182
              +K+LGKKFATG+SV K P   E+I VQGD+S D+ E++ + +  ++PE+ I  +ED 
Sbjct: 129 KKVAKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVQEWLLELYGKEIPESNIELVEDK 188

Query: 183 KK 184
           KK
Sbjct: 189 KK 190

Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) (taxid: 331117)

>sp|Q1E556|DENR_COCIM Translation machinery-associated protein 22 OS=Coccidioides immitis (strain RS) GN=TMA22 PE=3 SV=1

 Score =  119 bits (298), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 104/183 (56%), Gaps = 11/183 (6%)

Query: 4   KPQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQL 63
           +PQ   ++YC VCSLP EYCEFG   +KC+ WL +N P ++  L  E      + +   L
Sbjct: 15  EPQARHIVYCGVCSLPPEYCEFGGTAKKCEEWLHENNPSMHQKLYSE------ETIAANL 68

Query: 64  QSTGISSPASSAPKAEEVKH----LPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELF 119
            +  I +   +A  A + +     +     ++K   +V I++V RNKRK +T + GLE  
Sbjct: 69  STLSIQARERAAKDAAKKEAKAALVETRNQERKAAAKVQIKRVERNKRKHVTVIAGLEAH 128

Query: 120 GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW-PDVPETAIFF 178
           G+     +K+LGKKFATG+SV K P   E+I VQGD+  D++E++ +    +VPE  +  
Sbjct: 129 GLDNKKVAKELGKKFATGSSVTKNPAGGEEITVQGDVCEDVLEWLVEVHGKEVPEDNLEI 188

Query: 179 IED 181
           +ED
Sbjct: 189 VED 191

Coccidioides immitis (strain RS) (taxid: 246410)

>sp|Q4WBL6|DENR_ASPFU Translation machinery-associated protein 22 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=tma22 PE=3 SV=2

 Score =  119 bits (297), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/182 (39%), Positives = 107/182 (58%), Gaps = 7/182 (3%)

Query: 6   QPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREA--DKVGEQL 63
           Q  +V+YC VC+LP EYCEFG   +KC+ WL  N  +LY    + L S EA    + E  
Sbjct: 13  QAKKVVYCGVCTLPPEYCEFGGTAKKCEEWLKDNHAELY----QRLYSEEALSSNLSELS 68

Query: 64  QSTGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKL 123
            S    +   +A K  +         ++K   +V I++V RNKRK +T + GLE+ G++ 
Sbjct: 69  VSVRERAAKDAAKKEAKAAAAEARDAERKAAAKVQIKRVERNKRKHVTVITGLEVHGLEN 128

Query: 124 SDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW-PDVPETAIFFIEDG 182
              +K+LGKKFATG+SV K P   E+I VQGD+S D+ E++ + +  ++PE+ I  +ED 
Sbjct: 129 KKVAKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVKEWLLELYGKEIPESNIELVEDK 188

Query: 183 KK 184
           KK
Sbjct: 189 KK 190

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

>sp|A2QHG9|DENR_ASPNC Translation machinery-associated protein 22 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=tma22 PE=3 SV=1

 Score =  119 bits (297), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 113/200 (56%), Gaps = 18/200 (9%)

Query: 1   MAEKPQPV-------RVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNS 53
           MAE  QPV        V+YC VC+LP EYCEFG   +KC+ WL     D +PD+ + L S
Sbjct: 1   MAEVAQPVPAESQAKHVVYCGVCTLPPEYCEFGGTAKKCEEWL----KDAHPDMYQSLYS 56

Query: 54  READKVGEQLQSTGISS----PASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKC 109
            EA  +   L +  +S+       +A K  +         ++K   +V I++V RNKRK 
Sbjct: 57  EEA--LNSNLATLSVSARERAAKDAAKKEAKAAAAEARDAERKAASKVQIKRVERNKRKH 114

Query: 110 ITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW- 168
           +T + GL+++G++    +K LGKKFATG+S+ +     E+I VQGD+S D+ E++ + + 
Sbjct: 115 VTVITGLDIYGLENKKIAKDLGKKFATGSSMTRSAGGTEEITVQGDVSDDVKEWLLEVYG 174

Query: 169 PDVPETAIFFIEDGKKVPAV 188
            ++PE  I  IED KK  A 
Sbjct: 175 KEIPEANIELIEDKKKKKAT 194

Aspergillus niger (strain CBS 513.88 / FGSC A1513) (taxid: 425011)

>sp|Q5ZJ39|DENR_CHICK Density-regulated protein OS=Gallus gallus GN=DENR PE=2 SV=1

 Score =  117 bits (294), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 100/173 (57%), Gaps = 13/173 (7%)

Query: 7   PVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQST 66
           P+RVLYC VCSLP EYCE+ PD+ KC+ WL +N PD +  L  E + ++   VGE   + 
Sbjct: 28  PLRVLYCGVCSLPTEYCEYMPDVTKCRQWLEKNFPDEFAKLTVENSPKQEAGVGEGQGTA 87

Query: 67  GISSPASSAPKAEEVKHLPGGKIKKKDK---KEVVIEKVVRNKRKCITTVKGLELFGVKL 123
           G         +         G+IK+K K   ++V I K+ R K+K +T V GL  F + L
Sbjct: 88  GEEEEKKKQKRGGR------GQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFEIDL 141

Query: 124 SDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAI 176
            +A +   +KF+ GASV    T +++I +QGD + DI++ I + WP+V + +I
Sbjct: 142 KEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSI 190

May be involved in the translation of target mRNAs by scanning and recognition of the initiation codon.

Gallus gallus (taxid: 9031)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	188
449452514	193	PREDICTED: translation machinery-associa	0.994	0.968	0.848	9e-88
356530368	190	PREDICTED: translation machinery-associa	0.984	0.973	0.863	6e-87
351724291	192	uncharacterized protein LOC100306708 [Gl	0.994	0.973	0.853	6e-87
225444903	197	PREDICTED: translation machinery-associa	0.994	0.949	0.811	3e-86
388499658	193	unknown [Lotus japonicus]	0.994	0.968	0.838	3e-86
356530370	194	PREDICTED: translation machinery-associa	0.984	0.953	0.830	2e-85
225429534	197	PREDICTED: translation machinery-associa	0.994	0.949	0.801	2e-84
225429532	199	PREDICTED: translation machinery-associa	0.994	0.939	0.792	2e-84
224092186	200	predicted protein [Populus trichocarpa]	0.994	0.935	0.773	6e-83
255546115	196	Density-regulated protein, putative [Ric	0.994	0.954	0.817	2e-82

>gi|449452514|ref|XP_004144004.1| PREDICTED: translation machinery-associated protein 22-like [Cucumis sativus] gi|449489890|ref|XP_004158450.1| PREDICTED: translation machinery-associated protein 22-like [Cucumis sativus]

 Score =  328 bits (840), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 163/192 (84%), Positives = 173/192 (90%), Gaps = 5/192 (2%)

Query: 1   MAEKPQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVG 60
           MAEKPQPVRVLYC VCSLPAEYCEFGPD EKCKPWLIQN PDLYPDL +E N++EA +V 
Sbjct: 1   MAEKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60

Query: 61  EQLQSTGISSPA-----SSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKG 115
            QLQST ISS A     SS PK EEVK LPGGKIKKKDK+EV+IEKV RNKRKCITTVKG
Sbjct: 61  NQLQSTSISSAAGDGAASSGPKQEEVKRLPGGKIKKKDKQEVIIEKVTRNKRKCITTVKG 120

Query: 116 LELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETA 175
           L+LFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI+YDIV+FIT+TWPDVPETA
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFITETWPDVPETA 180

Query: 176 IFFIEDGKKVPA 187
           IFFIEDGKKVPA
Sbjct: 181 IFFIEDGKKVPA 192

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530368|ref|XP_003533754.1| PREDICTED: translation machinery-associated protein 22-like isoform 1 [Glycine max]

 Score =  325 bits (833), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 165/191 (86%), Positives = 173/191 (90%), Gaps = 6/191 (3%)

Query: 1   MAEKPQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVG 60
           MAEKPQPVRVLYC VCSLP EYCEFG D EKCKPWLIQN PDLYPDL +E   +EADKV 
Sbjct: 1   MAEKPQPVRVLYCGVCSLPPEYCEFGSDFEKCKPWLIQNVPDLYPDLLKE--EKEADKVA 58

Query: 61  EQLQSTGISSP----ASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGL 116
           ++LQSTGIS      ASSAPK EEVK LPGGKIKKKDK+EVVIEKVVRNKRKCITTVKGL
Sbjct: 59  DKLQSTGISGAGDGAASSAPKQEEVKRLPGGKIKKKDKQEVVIEKVVRNKRKCITTVKGL 118

Query: 117 ELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAI 176
           ELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI+YD+VEFITDTWPDVPETAI
Sbjct: 119 ELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDVVEFITDTWPDVPETAI 178

Query: 177 FFIEDGKKVPA 187
           FFIEDG+KVPA
Sbjct: 179 FFIEDGRKVPA 189

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724291|ref|NP_001235261.1| uncharacterized protein LOC100306708 [Glycine max] gi|255629337|gb|ACU15013.1| unknown [Glycine max]

 Score =  325 bits (832), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 163/191 (85%), Positives = 171/191 (89%), Gaps = 4/191 (2%)

Query: 1   MAEKPQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVG 60
           MAEKPQPVRVLYC VCSLP EYCEFG D EKCKPW IQN PDLYPDL +E N +EADKV 
Sbjct: 1   MAEKPQPVRVLYCGVCSLPPEYCEFGSDFEKCKPWSIQNVPDLYPDLLKEANEKEADKVA 60

Query: 61  EQLQSTGISSP----ASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGL 116
           ++LQSTGIS      A SAPK EEVK LPGGKIKKKDK+EVVIEKVVRNKRKCITTVKGL
Sbjct: 61  DKLQSTGISGAGDGAAPSAPKQEEVKRLPGGKIKKKDKQEVVIEKVVRNKRKCITTVKGL 120

Query: 117 ELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAI 176
           ELFGVKLSDASKKLGKKFATGASVVKGP+EKEQIDVQGDI+YDIVEFITDTWPDVPE AI
Sbjct: 121 ELFGVKLSDASKKLGKKFATGASVVKGPSEKEQIDVQGDIAYDIVEFITDTWPDVPEAAI 180

Query: 177 FFIEDGKKVPA 187
           FFIEDG+KVPA
Sbjct: 181 FFIEDGRKVPA 191

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444903|ref|XP_002281869.1| PREDICTED: translation machinery-associated protein 22 [Vitis vinifera] gi|297738660|emb|CBI27905.3| unnamed protein product [Vitis vinifera]

 Score =  323 bits (827), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 159/196 (81%), Positives = 174/196 (88%), Gaps = 9/196 (4%)

Query: 1   MAEKPQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVG 60
           MAEKPQPVRVLYC VCSLPAEYCEFG D EKCKPWLIQN PDLYPDL +E +S+EADKV 
Sbjct: 1   MAEKPQPVRVLYCQVCSLPAEYCEFGSDFEKCKPWLIQNAPDLYPDLLKEADSKEADKVA 60

Query: 61  EQLQSTGISSPAS---------SAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCIT 111
           +QLQST +SS ++         SA K EEVK LPGGKIK+K+K+EVVIEK+VRNKRKCIT
Sbjct: 61  QQLQSTALSSGSADGSAPSGGASASKQEEVKRLPGGKIKRKEKQEVVIEKIVRNKRKCIT 120

Query: 112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDV 171
           TVKGLELFG+KLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI+YDIVEFIT+TWPDV
Sbjct: 121 TVKGLELFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVEFITETWPDV 180

Query: 172 PETAIFFIEDGKKVPA 187
           PETAIFFIEDG+KV A
Sbjct: 181 PETAIFFIEDGRKVAA 196

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388499658|gb|AFK37895.1| unknown [Lotus japonicus]

 Score =  323 bits (827), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 161/192 (83%), Positives = 172/192 (89%), Gaps = 5/192 (2%)

Query: 1   MAEKPQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVG 60
           MAEKPQPVRV YC VCSLP EYCEFG D EKCKPWLIQN P +YPDL  E N+++ADKV 
Sbjct: 1   MAEKPQPVRVQYCQVCSLPPEYCEFGSDFEKCKPWLIQNAPHVYPDLVNEANAKDADKVA 60

Query: 61  EQLQSTGISS-----PASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKG 115
           ++LQSTG+SS      ASSAPK EEVK LPGGKIKKKDK+EVVIEKVVRNKRK ITTVKG
Sbjct: 61  DKLQSTGLSSGAGDGAASSAPKQEEVKRLPGGKIKKKDKQEVVIEKVVRNKRKSITTVKG 120

Query: 116 LELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETA 175
           LELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIS+DIVEFITDTWPDVPE+A
Sbjct: 121 LELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISFDIVEFITDTWPDVPESA 180

Query: 176 IFFIEDGKKVPA 187
           IFFIEDG+KVPA
Sbjct: 181 IFFIEDGRKVPA 192

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530370|ref|XP_003533755.1| PREDICTED: translation machinery-associated protein 22-like isoform 2 [Glycine max]

 Score =  320 bits (819), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 162/195 (83%), Positives = 171/195 (87%), Gaps = 10/195 (5%)

Query: 1   MAEKPQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVG 60
           MAEKPQPVRVLYC VCSLP EYCEFG D EKCKPWLIQN PDLYPDL +E   +EADKV 
Sbjct: 1   MAEKPQPVRVLYCGVCSLPPEYCEFGSDFEKCKPWLIQNVPDLYPDLLKE--EKEADKVA 58

Query: 61  EQLQSTGIS--------SPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITT 112
           ++LQSTGIS        S  +  PK EEVK LPGGKIKKKDK+EVVIEKVVRNKRKCITT
Sbjct: 59  DKLQSTGISGAGDGAASSAGTGTPKQEEVKRLPGGKIKKKDKQEVVIEKVVRNKRKCITT 118

Query: 113 VKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVP 172
           VKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI+YD+VEFITDTWPDVP
Sbjct: 119 VKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDVVEFITDTWPDVP 178

Query: 173 ETAIFFIEDGKKVPA 187
           ETAIFFIEDG+KVPA
Sbjct: 179 ETAIFFIEDGRKVPA 193

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429534|ref|XP_002279109.1| PREDICTED: translation machinery-associated protein 22 isoform 1 [Vitis vinifera] gi|296081652|emb|CBI20657.3| unnamed protein product [Vitis vinifera]

 Score =  317 bits (811), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 157/196 (80%), Positives = 172/196 (87%), Gaps = 9/196 (4%)

Query: 1   MAEKPQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVG 60
           MAEKPQPVRVLYC+VCSLPAEYCEFGPD EKCKPWLI+N P+LYPDL +E + +EADKV 
Sbjct: 1   MAEKPQPVRVLYCSVCSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEASEKEADKVS 60

Query: 61  EQLQSTGISSPA---------SSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCIT 111
           EQLQS GISS A         +S  K EEVK LPGGKIKKK+K+EV+IEKVVRNKRKCIT
Sbjct: 61  EQLQSVGISSGAGNETAPSGKTSTSKQEEVKRLPGGKIKKKEKQEVIIEKVVRNKRKCIT 120

Query: 112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDV 171
            VKGL+LFGVKL DASKKLGKKFATGASVVKGPT+KEQIDVQGDISYDIVEF+TDTWPDV
Sbjct: 121 IVKGLDLFGVKLGDASKKLGKKFATGASVVKGPTDKEQIDVQGDISYDIVEFVTDTWPDV 180

Query: 172 PETAIFFIEDGKKVPA 187
           PETAI+FIEDG+KV A
Sbjct: 181 PETAIYFIEDGRKVSA 196

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429532|ref|XP_002279152.1| PREDICTED: translation machinery-associated protein 22 isoform 2 [Vitis vinifera]

 Score =  317 bits (811), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 157/198 (79%), Positives = 172/198 (86%), Gaps = 11/198 (5%)

Query: 1   MAEKPQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVG 60
           MAEKPQPVRVLYC+VCSLPAEYCEFGPD EKCKPWLI+N P+LYPDL +E + +EADKV 
Sbjct: 1   MAEKPQPVRVLYCSVCSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEASEKEADKVS 60

Query: 61  EQLQSTGISSPA-----------SSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKC 109
           EQLQS GISS A           +S  K EEVK LPGGKIKKK+K+EV+IEKVVRNKRKC
Sbjct: 61  EQLQSVGISSGAGNETAPSAARKTSTSKQEEVKRLPGGKIKKKEKQEVIIEKVVRNKRKC 120

Query: 110 ITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWP 169
           IT VKGL+LFGVKL DASKKLGKKFATGASVVKGPT+KEQIDVQGDISYDIVEF+TDTWP
Sbjct: 121 ITIVKGLDLFGVKLGDASKKLGKKFATGASVVKGPTDKEQIDVQGDISYDIVEFVTDTWP 180

Query: 170 DVPETAIFFIEDGKKVPA 187
           DVPETAI+FIEDG+KV A
Sbjct: 181 DVPETAIYFIEDGRKVSA 198

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092186|ref|XP_002309499.1| predicted protein [Populus trichocarpa] gi|222855475|gb|EEE93022.1| predicted protein [Populus trichocarpa]

 Score =  311 bits (798), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 154/199 (77%), Positives = 171/199 (85%), Gaps = 12/199 (6%)

Query: 1   MAEKPQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVG 60
           MAEKP+PV+VLYC +CSLPAEYCEFGPD EKCKPWLI N P+LYPDL +E N +EA++V 
Sbjct: 1   MAEKPEPVKVLYCPLCSLPAEYCEFGPDFEKCKPWLIINAPELYPDLLKEANEKEAERVS 60

Query: 61  EQLQSTGISSPA------------SSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRK 108
           EQLQS GISS              +S+ K EEVK LPGGKIKKK ++EVVIEKVVRNKRK
Sbjct: 61  EQLQSAGISSSGADGAASFVQSGVTSSSKQEEVKRLPGGKIKKKARQEVVIEKVVRNKRK 120

Query: 109 CITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW 168
           CIT +KGL+LFG+KLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI+YDIVEFIT+TW
Sbjct: 121 CITIIKGLDLFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVEFITETW 180

Query: 169 PDVPETAIFFIEDGKKVPA 187
           PDVPETAIFFIEDGKKVPA
Sbjct: 181 PDVPETAIFFIEDGKKVPA 199

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546115|ref|XP_002514117.1| Density-regulated protein, putative [Ricinus communis] gi|223546573|gb|EEF48071.1| Density-regulated protein, putative [Ricinus communis]

 Score =  310 bits (793), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 161/197 (81%), Positives = 173/197 (87%), Gaps = 10/197 (5%)

Query: 1   MAEKPQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVG 60
           MA+KPQPVRVLYC VCSLPAEYCEFGPD EKCKPWLIQN PDLYPDL +E N++EADKV 
Sbjct: 1   MADKPQPVRVLYCQVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLIKEANAKEADKVA 60

Query: 61  EQLQ---------STGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCIT 111
           +QLQ             SS  +SAPK EEVK LPGGKIKKK+K+EVVIEKV RNKRKCIT
Sbjct: 61  DQLQFTGISSSGGDGSTSSGGTSAPK-EEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCIT 119

Query: 112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDV 171
           TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIS+DIV+FIT+TWPDV
Sbjct: 120 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISFDIVDFITETWPDV 179

Query: 172 PETAIFFIEDGKKVPAV 188
           PETAI+FIEDGKKVPAV
Sbjct: 180 PETAIYFIEDGKKVPAV 196

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	188
TAIR|locus:2143079	198	AT5G11900 [Arabidopsis thalian	0.994	0.944	0.654	1.2e-63
POMBASE|SPBC16C6.05	190	SPBC16C6.05 "mitochondrial tra	0.393	0.389	0.5	1.1e-27
DICTYBASE|DDB_G0279677	224	denr "density-regulated protei	0.414	0.348	0.487	2.7e-25
UNIPROTKB|A4QVI3	201	TMA22 "Translation machinery-a	0.930	0.870	0.366	1.6e-24
ZFIN|ZDB-GENE-040718-450	208	denr "density-regulated protei	0.287	0.259	0.5	5.4e-23
UNIPROTKB|E1BZC2	201	DENR "Density-regulated protei	0.324	0.303	0.460	2.9e-22
RGD|1584200	195	Denr "density-regulated protei	0.218	0.210	0.585	7.6e-22
UNIPROTKB|E1BIK7	202	E1BIK7 "Uncharacterized protei	0.324	0.301	0.442	1.6e-21
UNIPROTKB|F1REW9	202	DENR "Uncharacterized protein"	0.324	0.301	0.442	2.5e-21
UNIPROTKB|F1NE92	201	DENR "Density-regulated protei	0.882	0.825	0.333	8e-21

TAIR|locus:2143079 AT5G11900 [Arabidopsis thaliana (taxid:3702)]

 Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
 Identities = 129/197 (65%), Positives = 140/197 (71%)

Query:     1 MAEKPQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVG 60
             MAEK +PV+VLYC VCSLPAEYCEFGPD  +CKPWL++N PDLYPDL +E N + AD V 
Sbjct:     1 MAEKLEPVKVLYCGVCSLPAEYCEFGPDFARCKPWLVENAPDLYPDLLKEANEKAADNVS 60

Query:    61 EQLQSTGIXXXXXX----------XXKAEEVKHLPGGXXXXXXXXXXXXXXXXXXXXXCI 110
             ++LQS GI                  K EEVK LPGG                     CI
Sbjct:    61 DKLQSVGISSGGADGAPSSAQTGGTSKKEEVKRLPGGKVKKKDRQEVIIEKVVRNKRKCI 120

Query:   111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPD 170
             T VKGLELFG+KLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI YDIVEFITDTWPD
Sbjct:   121 TIVKGLELFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIIYDIVEFITDTWPD 180

Query:   171 VPETAIFFIEDGKKVPA 187
             VPE +IFFIEDGKKV A
Sbjct:   181 VPERSIFFIEDGKKVQA 197

GO:0003743 "translation initiation factor activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006413 "translational initiation" evidence=IEA;ISS

POMBASE|SPBC16C6.05 SPBC16C6.05 "mitochondrial translation initiation factor (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 191 (72.3 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
 Identities = 37/74 (50%), Positives = 53/74 (71%)

Query:   110 ITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWP 169
             +TTV+GL+ FG++   A+K L  KFATGASV K   +K++I VQGD++YDI +FI + + 
Sbjct:   112 VTTVQGLDAFGIETKKAAKMLANKFATGASVTKTADKKDEIVVQGDLNYDIFDFILEKFK 171

Query:   170 DVPETAIFFIEDGK 183
             +VPE  I  +ED K
Sbjct:   172 EVPEDNIKIVEDTK 185

GO:0003743 "translation initiation factor activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005840 "ribosome" evidence=IEA

GO:0006413 "translational initiation" evidence=IEA

GO:0032543 "mitochondrial translation" evidence=NAS

DICTYBASE|DDB_G0279677 denr "density-regulated protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 199 (75.1 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
 Identities = 39/80 (48%), Positives = 56/80 (70%)

Query:   110 ITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTE--KEQIDVQGDISYDIVEFITDT 167
             +T + GLEL+G+KLSDA+K + KKF+ G SVVK  +    E ID+QGD   ++V+ I + 
Sbjct:   144 VTKITGLELYGIKLSDAAKVMAKKFSCGCSVVKSISNPNSEDIDIQGDFGEELVDLIEEK 203

Query:   168 WPDVPETAIFFIEDGKKVPA 187
             +P VP + I+F+ED KKV A
Sbjct:   204 YPTVPLSEIYFLEDKKKVKA 223

GO:0006413 "translational initiation" evidence=IEA

GO:0003743 "translation initiation factor activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|A4QVI3 TMA22 "Translation machinery-associated protein 22" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 67/183 (36%), Positives = 94/183 (51%)

Query:     4 KPQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDL--AEELNSREAD-KVG 60
             +PQ   V YC VCSLP EYCE+G  ++KC+ WL +N  ++Y  +   E L +  A   V 
Sbjct:    13 EPQGREVTYCGVCSLPPEYCEYGGTVKKCQDWLQRNNQEMYDRIWSPEALQAATAALSVE 72

Query:    61 EQLQSTGIXXXXXXXXKAEEVKHLPGGXXXXXXXXXXXXXXXXXXXXXCITTVKGLELFG 120
              Q ++           +A E KH                          +T+V GLE FG
Sbjct:    73 AQQRAEKDAKKKAAKAEAAEAKH-----ADKLKKSVVTVKRIERNKRKYVTSVSGLESFG 127

Query:   121 VKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIE 180
             ++L   +K  GKKFATG+SV K  +  E+I VQGD+S +I EFI + + DVPE  I  ++
Sbjct:   128 LELKKVAKDFGKKFATGSSVTKVASGGEEIVVQGDVSDEIKEFIVEKYKDVPEDNIELVD 187

Query:   181 DGK 183
             D K
Sbjct:   188 DKK 190

GO:0005575 "cellular_component" evidence=ND

ZFIN|ZDB-GENE-040718-450 denr "density-regulated protein" [Danio rerio (taxid:7955)]

 Score = 153 (58.9 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
 Identities = 27/54 (50%), Positives = 36/54 (66%)

Query:     7 PVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVG 60
             P++VLYC VCSLPAEYCE+ P+  KCK WL +N PD++  L      ++  K G
Sbjct:    26 PLKVLYCGVCSLPAEYCEYMPEPAKCKQWLEKNFPDVFAKLTLGTAPKQESKGG 79

GO:0003743 "translation initiation factor activity" evidence=IEA

GO:0006413 "translational initiation" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|E1BZC2 DENR "Density-regulated protein" [Gallus gallus (taxid:9031)]

 Score = 150 (57.9 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
 Identities = 29/63 (46%), Positives = 39/63 (61%)

Query:     7 PVRVLYCA--VCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQ 64
             P+RVLYC    CSLP EYCE+ PD+ KC+ WL +N PD +  L  E + ++   VGE   
Sbjct:    28 PLRVLYCGGKFCSLPTEYCEYMPDVTKCRQWLEKNFPDEFAKLTVENSPKQEAGVGEGQG 87

Query:    65 STG 67
             + G
Sbjct:    88 TAG 90

GO:0003743 "translation initiation factor activity" evidence=IEA

RGD|1584200 Denr "density-regulated protein" [Rattus norvegicus (taxid:10116)]

 Score = 146 (56.5 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
 Identities = 24/41 (58%), Positives = 31/41 (75%)

Query:     7 PVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDL 47
             P+RVLYC VCSLP EYCE+ PD+ KC+ WL +N P+ +  L
Sbjct:    24 PLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKL 64

GO:0003743 "translation initiation factor activity" evidence=IEA

UNIPROTKB|E1BIK7 E1BIK7 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 154 (59.3 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
 Identities = 27/61 (44%), Positives = 39/61 (63%)

Query:     7 PVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQST 66
             P+RVLYC VCSLP EYCE+ PD+ KC+ WL +N P+ +  L  E + ++   + E   + 
Sbjct:    28 PLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPKQEAGISEGQGTA 87

Query:    67 G 67
             G
Sbjct:    88 G 88

GO:0003743 "translation initiation factor activity" evidence=IEA

UNIPROTKB|F1REW9 DENR "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 152 (58.6 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
 Identities = 27/61 (44%), Positives = 39/61 (63%)

Query:     7 PVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQST 66
             P+RVLYC VCSLP EYCE+ PD+ KC+ WL +N P+ +  L  E + ++   + E   + 
Sbjct:    28 PLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPKQEAGITEGQGTA 87

Query:    67 G 67
             G
Sbjct:    88 G 88

GO:0003743 "translation initiation factor activity" evidence=IEA

UNIPROTKB|F1NE92 DENR "Density-regulated protein" [Gallus gallus (taxid:9031)]

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 61/183 (33%), Positives = 92/183 (50%)

Query:     7 PVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQST 66
             P+RVLYC VCSLP EYCE+ PD+ KC+ WL +N PD +  L  E + ++   VGE   + 
Sbjct:    31 PLRVLYCGVCSLPTEYCEYMPDVTKCRQWLEKNFPDEFAKLTVENSPKQEAGVGEGQGTA 90

Query:    67 GIXXXXXXXXKAEEVKHLPGGXXXXXXXXXX-----XXXXXXXXXXXCITTVKGLELFGV 121
             G         + E+ K   GG                           +T V GL  F +
Sbjct:    91 G--------EEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFEI 142

Query:   122 KLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIED 181
              L +A +   +KF+ GASV    T +++I +QGD + DI++ I + WP+V + +I  + +
Sbjct:   143 DLKEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSIEDLGE 198

Query:   182 GKK 184
              KK
Sbjct:   199 VKK 201

GO:0003743 "translation initiation factor activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6BH22	DENR_DEBHA	No assigned EC number	0.375	0.8191	0.8148	yes	no
Q9NAH4	DENR_CAEEL	No assigned EC number	0.3146	0.9042	0.8854	yes	no
Q2HJ47	DENR_BOVIN	No assigned EC number	0.3641	0.8510	0.8080	yes	no
Q4WBL6	DENR_ASPFU	No assigned EC number	0.3956	0.9308	0.9020	yes	no
O42929	DENR_SCHPO	No assigned EC number	0.4022	0.9521	0.9421	yes	no
A2QHG9	DENR_ASPNC	No assigned EC number	0.375	0.9680	0.9238	yes	no
Q2TVZ2	DENR_ASPOR	No assigned EC number	0.3858	0.9202	0.8917	yes	no
Q5ZJ39	DENR_CHICK	No assigned EC number	0.3815	0.8510	0.8080	yes	no
Q5RFP5	DENR_PONAB	No assigned EC number	0.3641	0.8510	0.8080	yes	no
O43583	DENR_HUMAN	No assigned EC number	0.3641	0.8510	0.8080	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00016551001	SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (193 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00022683001	SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (181 aa)				•	•		•		0.745

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	188
TIGR01159	173	TIGR01159, DRP1, density-regulated protein DRP1	6e-68
cd11607	86	cd11607, DENR_C, C-terminal domain of DENR and rel	4e-40
pfam01253	74	pfam01253, SUI1, Translation initiation factor SUI	3e-17
COG0023	104	COG0023, SUI1, Translation initiation factor 1 (eI	7e-12
cd11608	85	cd11608, eIF2D_C, C-terminal domain of eIF2D and r	4e-08
cd11566	84	cd11566, eIF1_SUI1, Eukaryotic initiation factor 1	7e-07
cd00474	78	cd00474, eIF1_SUI1_like, Eukaryotic initiation fac	3e-05
TIGR01160	110	TIGR01160, SUI1_MOF2, translation initiation facto	8e-05

>gnl|CDD|233294 TIGR01159, DRP1, density-regulated protein DRP1

 Score =  204 bits (521), Expect = 6e-68
 Identities = 78/176 (44%), Positives = 102/176 (57%), Gaps = 6/176 (3%)

Query: 7   PVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSR---EADKVGEQL 63
           P+RVLYC VCSLP EYCEF  DL++CK WL +N PDLY  L    +     EA  +GE  
Sbjct: 1   PLRVLYCGVCSLPPEYCEFSGDLKRCKVWLSENAPDLYAKLYGTDSPTAEAEAVTIGEAQ 60

Query: 64  QSTGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKL 123
           +  G           E      GGK KKK  ++V I++  R KRK +T +KGLE F + L
Sbjct: 61  EEKGEKDLLGIQKAQEAR---EGGKKKKKLPQKVTIKREPRTKRKFVTVIKGLETFDIDL 117

Query: 124 SDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFI 179
             ASK   +KFATG SV K  T KE+I +QGD+  DI ++I + WP+V +  I  +
Sbjct: 118 KKASKTFAQKFATGCSVSKSVTGKEEIVIQGDVMDDIEDYIHEKWPEVGDKDIKDL 173

This protein family shows weak but suggestive similarity to translation initiation factor SUI1 and its prokaryotic homologs. Length = 173

>gnl|CDD|211320 cd11607, DENR_C, C-terminal domain of DENR and related proteins

 Score =  131 bits (331), Expect = 4e-40
 Identities = 41/86 (47%), Positives = 58/86 (67%)

Query: 95  KEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQG 154
            +V I+++ RNKRK +TTV GLE FG+ L  A+K   KKFA GASV KG   K++I +QG
Sbjct: 1   SKVTIKRISRNKRKFVTTVTGLETFGIDLKKAAKLFAKKFACGASVTKGAEGKDEIVIQG 60

Query: 155 DISYDIVEFITDTWPDVPETAIFFIE 180
           D++ DIV+ I + WP++ E  I  + 
Sbjct: 61  DVTDDIVDLILEKWPEIDEDNIEILG 86

DENR (density regulated protein), together with MCT-1 (multiple copies T cell malignancies), has been shown to have similar function as eIF2D translation initiation factor (also known as ligatin), which is involved in the recruitment and delivery of aminoacyl-tRNAs to the P-site of the eukaryotic ribosome in a GTP-independent manner. Length = 86

>gnl|CDD|216391 pfam01253, SUI1, Translation initiation factor SUI1

 Score = 72.1 bits (178), Expect = 3e-17
 Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 4/78 (5%)

Query: 91  KKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQI 150
           KK+ +++ I +  R   K +T V GLELFG+ L   +K+L KKF  G +V  G    E+I
Sbjct: 1   KKEDQKIRIRREKRRGGKTVTVVTGLELFGIDLKKLAKELKKKFGCGGTVKDG----EEI 56

Query: 151 DVQGDISYDIVEFITDTW 168
           ++QGD    + + +    
Sbjct: 57  EIQGDHRDKVKDLLEKEG 74

Length = 74

>gnl|CDD|223102 COG0023, SUI1, Translation initiation factor 1 (eIF-1/SUI1) and related proteins [Translation, ribosomal structure and biogenesis]

 Score = 58.9 bits (143), Expect = 7e-12
 Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 5/91 (5%)

Query: 76  PKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFA 135
            +    K L   ++ K+  + V I +  R K K +T ++GL+L  + L   +K+L KK A
Sbjct: 8   GRIGLPKELTCEEVAKEGDQIVRIRRETRRKGKTVTIIEGLDLKDIDLKKLAKELKKKCA 67

Query: 136 TGASVVKGPTEKEQIDVQGDISYDIVEFITD 166
            G +V  G     +I++QGD    + E +  
Sbjct: 68  CGGTVKDG-----EIEIQGDHRDKVKELLIK 93

Length = 104

>gnl|CDD|211321 cd11608, eIF2D_C, C-terminal domain of eIF2D and related proteins

 Score = 48.3 bits (116), Expect = 4e-08
 Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 4/75 (5%)

Query: 96  EVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKE--QIDVQ 153
           ++  E+   NK+  +T + GLE FG+   + +K+L KK A   SV   P +K+  ++ VQ
Sbjct: 3   DITTERRQGNKK--VTLISGLESFGIDPEEFAKELQKKCAASTSVSPLPGKKKGVEVQVQ 60

Query: 154 GDISYDIVEFITDTW 168
           G+    + + +T+ +
Sbjct: 61  GNQVKFVAKLLTEKY 75

eIF2D translation initiation factor (also known as ligatin) is involved in the recruitment and delivery of aminoacyl-tRNAs to the P-site of the eukaryotic ribosome in a GTP-independent manner. Length = 85

>gnl|CDD|211318 cd11566, eIF1_SUI1, Eukaryotic initiation factor 1

 Score = 44.8 bits (107), Expect = 7e-07
 Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 104 RNKRKCITTVKGL-ELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVE 162
           RN RK +TTV+GL E F +K     K   K+FA   +VV+ P   E I +QGD   +I E
Sbjct: 10  RNGRKTLTTVQGLPEEFDLKK--ILKAFKKEFACNGTVVEDPEYGEVIQLQGDQRKNIKE 67

Query: 163 FITD 166
           F+ +
Sbjct: 68  FLLE 71

eIF1/SUI1 (eukaryotic initiation factor 1) plays an important role in accurate initiator codon recognition during translation initiation. eIF1 interacts with 18S rRNA in the 40S ribosomal subunit during eukaryotic translation initiation. Point mutations in the yeast eIF1 implicate the protein in maintaining accurate start-site selection but its mechanism of action is unknown. Length = 84

>gnl|CDD|211317 cd00474, eIF1_SUI1_like, Eukaryotic initiation factor 1 and related proteins

 Score = 40.5 bits (95), Expect = 3e-05
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 4/75 (5%)

Query: 97  VVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI 156
           + I+   R+  K +T V+GL  + + L   + +L KK   G SV     EK +I++QGD 
Sbjct: 2   IHIKVEQRSGGKKVTKVEGLPAY-IDLRKLADELKKKLGCGGSVEG---EKMEIEIQGDH 57

Query: 157 SYDIVEFITDTWPDV 171
           +  I+  + +   D 
Sbjct: 58  TDQIIVALEEKGIDK 72

Members of the eIF1/SUI1 (eukaryotic initiation factor 1) family are found in eukaryotes, archaea, and some bacteria; eukaryotic members are understood to play an important role in accurate initiator codon recognition during translation initiation. eIF1 interacts with 18S rRNA in the 40S ribosomal subunit during eukaryotic translation initiation. Point mutations in the yeast eIF1 implicate the protein in maintaining accurate start-site selection but its mechanism of action is unknown. The function of non-eukaryotic family members is also unclear. Length = 78

>gnl|CDD|130228 TIGR01160, SUI1_MOF2, translation initiation factor SUI1, eukaryotic

 Score = 40.2 bits (94), Expect = 8e-05
 Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 104 RNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEF 163
           RN RK +TTV+GL      L    K L K+FA   +V++ P   E I +QGD   ++ EF
Sbjct: 35  RNGRKTLTTVQGLPK-EYDLKKIVKALKKEFACNGTVIEDPEMGEVIQLQGDQRKNVCEF 93

Query: 164 I 164
           +
Sbjct: 94  L 94

Alternate name: MOF2. A similar protein family (see TIGRFAMs model TIGR01158) is found in prokaryotes. The human proteins complements a yeast SUI1 mutatation [Protein synthesis, Translation factors]. Length = 110

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	188
TIGR01159	173	DRP1 density-regulated protein DRP1. This protein	100.0
KOG3239	193	consensus Density-regulated protein related to tra	100.0
PF01253	83	SUI1: Translation initiation factor SUI1; InterPro	99.93
COG0023	104	SUI1 Translation initiation factor 1 (eIF-1/SUI1)	99.93
cd00474	77	SUI1_eIF1 The SUI1/eIF1 (eukaryotic initiation fac	99.91
TIGR01160	110	SUI1_MOF2 translation initiation factor SUI1, euka	99.89
PRK00939	99	translation initiation factor Sui1; Reviewed	99.89
TIGR01158	101	SUI1_rel translation initation factor SUI1, putati	99.85
KOG1770	112	consensus Translation initiation factor 1 (eIF-1/S	99.81
KOG2522	560	consensus Filamentous baseplate protein Ligatin, c	99.79
PRK06824	118	translation initiation factor Sui1; Validated	99.77
PRK07451	115	translation initiation factor Sui1; Validated	99.76
PRK09019	108	translation initiation factor Sui1; Validated	99.75
PF05046	87	Img2: Mitochondrial large subunit ribosomal protei	97.75
smart00653	110	eIF2B_5 domain present in translation initiation f	93.67
KOG4034	169	consensus Uncharacterized conserved protein NOF (N	93.67
PRK03988	138	translation initiation factor IF-2 subunit beta; V	93.4
TIGR00311	133	aIF-2beta translation initiation factor aIF-2, bet	93.23
PRK14434	92	acylphosphatase; Provisional	93.04
PRK14444	92	acylphosphatase; Provisional	92.95
PRK14451	89	acylphosphatase; Provisional	92.64
PRK14449	90	acylphosphatase; Provisional	92.45
PRK14425	94	acylphosphatase; Provisional	92.02
PRK14437	109	acylphosphatase; Provisional	91.87
PRK14436	91	acylphosphatase; Provisional	91.69
PRK14445	91	acylphosphatase; Provisional	91.09
PRK14422	93	acylphosphatase; Provisional	91.09
PRK14440	90	acylphosphatase; Provisional	91.06
PRK14438	91	acylphosphatase; Provisional	90.94
PRK14446	88	acylphosphatase; Provisional	90.89
PRK14433	87	acylphosphatase; Provisional	90.83
PRK14428	97	acylphosphatase; Provisional	90.78
PRK14429	90	acylphosphatase; Provisional	90.78
PRK14443	93	acylphosphatase; Provisional	90.73
PRK14420	91	acylphosphatase; Provisional	90.73
PF01873	125	eIF-5_eIF-2B: Domain found in IF2B/IF5; InterPro:	90.66
PRK14442	91	acylphosphatase; Provisional	90.64
PRK14452	107	acylphosphatase; Provisional	90.63
PRK14435	90	acylphosphatase; Provisional	90.45
PRK14427	94	acylphosphatase; Provisional	90.01
PRK14423	92	acylphosphatase; Provisional	89.83
PRK14447	95	acylphosphatase; Provisional	89.75
PRK14426	92	acylphosphatase; Provisional	89.44
PRK12336	201	translation initiation factor IF-2 subunit beta; P	89.26
PRK14421	99	acylphosphatase; Provisional	89.2
PRK14441	93	acylphosphatase; Provisional	89.15
PF00708	91	Acylphosphatase: Acylphosphatase; InterPro: IPR001	88.97
PRK14432	93	acylphosphatase; Provisional	88.33
PRK14450	91	acylphosphatase; Provisional	88.3
PRK14439	163	acylphosphatase; Provisional	88.0
PRK14448	90	acylphosphatase; Provisional	87.97
TIGR02174	72	CXXU_selWTH selT/selW/selH selenoprotein domain. T	85.42
PRK14424	94	acylphosphatase; Provisional	85.3
PRK14430	92	acylphosphatase; Provisional	84.25
PRK14431	89	acylphosphatase; Provisional	82.0

>TIGR01159 DRP1 density-regulated protein DRP1

Probab=100.00  E-value=1.1e-59  Score=384.64  Aligned_cols=167  Identities=44%  Similarity=0.742  Sum_probs=141.9

Q ss_pred             ceeEEEcCCCCCCccccccCCChhhHHHHHHhhCCCCchHHHhhhhhhhhhhhhhhhhccCCCCC-----CCCC-chhhh
Q 029752            7 PVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQSTGISSP-----ASSA-PKAEE   80 (188)
Q Consensus         7 p~~V~YC~vC~~P~EyCEf~~~~~kCk~wl~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-k~~~k   80 (188)
                      |++|+||||||||||||||||++++|++||++||||||++||++.      .+.+.+...+++..     +.++ +++.+
T Consensus         1 p~~V~YCgvCs~P~EyCEf~~~~~kCk~WL~~n~p~l~~~l~~~~------~~~~~~~~~~~~~~~~~~~~~~~~k~~~~   74 (173)
T TIGR01159         1 PLRVLYCGVCSLPPEYCEFSGDLKRCKVWLSENAPDLYAKLYGTD------SPTAEAEAVTIGEAQEEKGEKDLLGIQKA   74 (173)
T ss_pred             CceeEECCCCCCchHHhcCCCCHHHHHHHHHHhChHHHHHHhhcc------cchhccccchhhHHHHhhhhhhhhHHHhh
Confidence            789999999999999999999999999999999999999999842      22222211112211     1222 23333


Q ss_pred             hhcCCCCCCCCCCCCcEEEEEEeecCCeeEEEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHH
Q 029752           81 VKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDI  160 (188)
Q Consensus        81 ~~~~~~~~~kk~~~~~I~I~~~~R~grK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v  160 (188)
                      ..+.++++.+|+.+++|+|++++|+|||+||+|+||+.|++||++|||.|+++||||+||++++.++++|+|||||+++|
T Consensus        75 ~~~~~~~~~kK~~~~~V~I~~~~R~krK~VT~V~GLe~f~idlk~laK~lkkkfacG~SV~k~~~~~~eI~IQGD~~~~v  154 (173)
T TIGR01159        75 QEAREGGKKKKKLPQKVTIKREPRTKRKFVTVIKGLETFDIDLKKASKTFAQKFATGCSVSKSVTGKEEIVIQGDVMDDI  154 (173)
T ss_pred             hhhhhhhhhccCCCCeEEEEEEecCCCceEEEEeCCcCCCcCHHHHHHHHHHHhCCCCccccCCCCCCEEEecCCHHHHH
Confidence            33556678889999999999999999999999999999999999999999999999999999998899999999999999


Q ss_pred             HHHHHhhCCCCCCCcEEEc
Q 029752          161 VEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       161 ~~~L~~~~~~ip~~~I~~~  179 (188)
                      .+||.++||+||+++|+++
T Consensus       155 ~e~L~~~~~~v~e~~I~~~  173 (173)
T TIGR01159       155 EDYIHEKWPEVGDKDIKDL  173 (173)
T ss_pred             HHHHHHHcCCCCHHHeeeC
Confidence            9999999999999999875

This protein family shows weak but suggestive similarity to translation initiation factor SUI1 and its prokaryotic homologs.

>KOG3239 consensus Density-regulated protein related to translation initiation factor 1 (eIF-1/SUI1) [General function prediction only]

Probab=100.00  E-value=6.6e-58  Score=371.13  Aligned_cols=172  Identities=44%  Similarity=0.776  Sum_probs=139.7

Q ss_pred             CCCCCCcee--EEEcCCCCCCccccccCCChhhHHHHHHhhCCCCchHHHhhhhhhhhhhhhhhhhccCCCCCCCC----
Q 029752            1 MAEKPQPVR--VLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQSTGISSPASS----   74 (188)
Q Consensus         1 m~~~~~p~~--V~YC~vC~~P~EyCEf~~~~~kCk~wl~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----   74 (188)
                      ||+.+.|+.  |+|||+||||+|||||+|++++|++||+.||||||++||.+.+..-+......   .+.+.++.+    
T Consensus         1 ~a~k~~P~~~~vlYCGvCSlP~EYCEf~~~~~kCk~WL~~n~pdly~kL~~e~~~~qe~~~s~~---~~a~G~~~e~k~e   77 (193)
T KOG3239|consen    1 MADKLGPRKGSVLYCGVCSLPPEYCEFSGDLKKCKEWLEENHPDLYAKLYGEDDPKQEVEASTA---EGADGEADEKKKE   77 (193)
T ss_pred             CCccCCCcccceEEeeccCCCHHHHHccccHHHHHHHHHhcChhHHHhhhcccChhhhhccccc---ccccCCchhhHHH
Confidence            888888888  99999999999999999999999999999999999999985432111111000   011111111    


Q ss_pred             ---CchhhhhhcCCCCCCCCCCCCcEEEEEEeecCCeeEEEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEE
Q 029752           75 ---APKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQID  151 (188)
Q Consensus        75 ---~k~~~k~~~~~~~~~kk~~~~~I~I~~~~R~grK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~  151 (188)
                         ++-+.+.+....++.+|+.+++|.|.++.|++||+||+|+||+.|+|||+.+||.|+++||||+||++++.+.+||+
T Consensus        78 k~~gk~~k~~~~~~~~e~~k~~pqkV~I~r~~R~KrK~VT~V~GL~~FdIdlk~aaK~fa~KFAtGaSVtk~a~kkdEIv  157 (193)
T KOG3239|consen   78 KRGGKGQKKQENRSQREKKKRLPQKVIIKREARTKRKSVTVVKGLETFDIDLKKAAKFFAQKFATGASVTKNAEKKDEIV  157 (193)
T ss_pred             hccccchhhhhhHHHHHHhccCCceeEeeecccCCceeEEEEechhhccccHHHHHHHHHHhhccCccccCCCCccceEE
Confidence               11111122233445667889999999999999999999999999999999999999999999999999999999999


Q ss_pred             EcCCchHHHHHHHHhhCCCCCCCc
Q 029752          152 VQGDISYDIVEFITDTWPDVPETA  175 (188)
Q Consensus       152 iQGD~~~~v~~~L~~~~~~ip~~~  175 (188)
                      ||||+.++|.+||.++|+.||+++
T Consensus       158 IQGDv~dDi~d~I~ekw~ev~ed~  181 (193)
T KOG3239|consen  158 IQGDVKDDIFDFIPEKWPEVPEDD  181 (193)
T ss_pred             EeccchHHHHHHHHHhcccCCccc
Confidence            999999999999999999999996

>PF01253 SUI1: Translation initiation factor SUI1; InterPro: IPR001950 In Saccharomyces cerevisiae (Baker's yeast), SUI1 is a translation initiation factor that functions in concert with eIF-2 and the initiator tRNA-Met in directing the ribosome to the proper start site of translation []

Probab=99.93  E-value=4.2e-26  Score=165.96  Aligned_cols=82  Identities=40%  Similarity=0.657  Sum_probs=70.4

Q ss_pred             CCCCCcEEEEEEeecCCeeEEEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCC
Q 029752           91 KKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPD  170 (188)
Q Consensus        91 k~~~~~I~I~~~~R~grK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~  170 (188)
                      |+..+.|+|++++|+|||+||+|+||+.|++|+++||+.|+++|||||||.++++++++|+||||++++|.+||.++| +
T Consensus         1 k~~~~~I~I~~e~r~~~K~vT~V~gl~~~~~d~~~lak~lkk~~ac~~sv~~~~~k~~~I~iQGd~~~~i~~~L~~~~-~   79 (83)
T PF01253_consen    1 KKEPPKIHIRVEKRRGRKFVTIVSGLELFGIDLKELAKELKKKFACGGSVTKDPGKGEEIQIQGDHRDEIKDLLVEKG-G   79 (83)
T ss_dssp             -S-TTCEEEEEEESSSSEEEEEEES--STTSHHHHHHHHHHHHHTS-EEEEE-TTTSSEEEEESS-HHHHHHHHHHHC-S
T ss_pred             CCCCCEEEEEEEeCcCCeEEEEEECCcccccCHHHHHHHHHHhccCceEEeecCCCCCEEEECCcHHHHHHHHHHHhC-C
Confidence            467899999999999999999999999999999999999999999999999988667899999999999999999998 6


Q ss_pred             CCC
Q 029752          171 VPE  173 (188)
Q Consensus       171 ip~  173 (188)
                      +|+
T Consensus        80 ~~k   82 (83)
T PF01253_consen   80 IPK   82 (83)
T ss_dssp             SE-
T ss_pred             CCC
Confidence            664

SUI1 is a protein of 108 residues. Close homologs of SUI1 have been found [] in mammals, insects and plants. SUI1 is also evolutionary related to hypothetical proteins from Escherichia coli (yciH), Haemophilus influenzae (HI1225) and Methanococcus vannielii.; GO: 0003743 translation initiation factor activity, 0006413 translational initiation; PDB: 2OGH_A 1D1R_A 2IF1_A 2XZN_F 2XZM_F.

>COG0023 SUI1 Translation initiation factor 1 (eIF-1/SUI1) and related proteins [Translation, ribosomal structure and biogenesis]

Probab=99.93  E-value=4.2e-26  Score=172.75  Aligned_cols=80  Identities=29%  Similarity=0.435  Sum_probs=75.5

Q ss_pred             CCCCcEEEEEEeecCCeeEEEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCC
Q 029752           92 KDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDV  171 (188)
Q Consensus        92 ~~~~~I~I~~~~R~grK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~i  171 (188)
                      ...+.|+|++++|+++|.||+|+||+.|++||++||+.|+++|||||||     ++++|+|||||++.|.+||.++  |+
T Consensus        24 ~~~~~V~I~~e~rr~gK~VTiI~Gld~~~~dlk~Lak~LKk~cacGGtv-----k~~~IeiQGdhr~~v~~~L~~~--G~   96 (104)
T COG0023          24 EGDQIVRIRRETRRKGKTVTIIEGLDLKDIDLKKLAKELKKKCACGGTV-----KDGEIEIQGDHRDKVKELLIKK--GF   96 (104)
T ss_pred             ccCCeEEEEEEeecCCcEEEEEeCcccchhhHHHHHHHHHHHcCCCcee-----cCCEEEEeChHHHHHHHHHHHc--CC
Confidence            4578999999999999999999999999999999999999999999999     5569999999999999999996  99


Q ss_pred             CCCcEEE
Q 029752          172 PETAIFF  178 (188)
Q Consensus       172 p~~~I~~  178 (188)
                      +.++|.+
T Consensus        97 k~k~i~~  103 (104)
T COG0023          97 KVKNIGI  103 (104)
T ss_pred             chhhccc
Confidence            9999975

>cd00474 SUI1_eIF1 The SUI1/eIF1 (eukaryotic initiation factor 1) fold is found in eukaryotes, archaea, and some bacteria and is thought to play an important role in accurate initiator codon recognition during translation initiation

Probab=99.91  E-value=3.7e-24  Score=154.52  Aligned_cols=76  Identities=37%  Similarity=0.440  Sum_probs=71.8

Q ss_pred             cEEEEEEeecCCeeEEEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCc
Q 029752           96 EVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETA  175 (188)
Q Consensus        96 ~I~I~~~~R~grK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~  175 (188)
                      .|+|++++|++||+||+|+||+.|.+|+++||+.|+++|||||||.     +++|+||||+++.|.+||.++  |+++++
T Consensus         1 ~V~I~~e~R~~~K~VT~I~Gl~~~~~dlk~l~k~lKk~~~cggtv~-----~~~I~lQGD~r~~v~~~L~~~--g~~~~~   73 (77)
T cd00474           1 VVRIRIQQRNGGKTVTTVQGLDLEYADLKKLAKELKKKCACGGTVK-----DEVIELQGDQRKKIKEFLIKM--GFAKDN   73 (77)
T ss_pred             CEEEEEEECCCCccEEEEECCCCchHhHHHHHHHHHHHcCCCcEEe-----cCEEEEeCcHHHHHHHHHHHc--CCCHHH
Confidence            3899999999999999999999999999999999999999999994     489999999999999999998  999998


Q ss_pred             EEE
Q 029752          176 IFF  178 (188)
Q Consensus       176 I~~  178 (188)
                      |.+
T Consensus        74 i~i   76 (77)
T cd00474          74 IKI   76 (77)
T ss_pred             eEe
Confidence            875

This fold, which includes two antiparallel alpha helices packed against the same side of a five-strand beta sheet, is structurally similar to other RNA-binding domains suggesting that SUI1/eIF1 may bind RNA. Point mutations in the yeast eIF1 implicate the protein in maintaining accurate start-site selection but its mechanism of action is unknown.

>TIGR01160 SUI1_MOF2 translation initiation factor SUI1, eukaryotic

Probab=99.89  E-value=2.5e-23  Score=159.30  Aligned_cols=85  Identities=31%  Similarity=0.393  Sum_probs=78.1

Q ss_pred             CCCcEEEEEEeecCCeeEEEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCC
Q 029752           93 DKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVP  172 (188)
Q Consensus        93 ~~~~I~I~~~~R~grK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip  172 (188)
                      ....|+|++++|+|||+||+|+||+. .+||++|||.|+++|||||||..++.++++|+|||||+++|.+||.++. -++
T Consensus        24 ~~~~I~Iri~qR~grK~VTiI~Gl~~-~~dlk~l~K~lKkk~~cGGsVk~~~~~~~~IelQGD~re~v~~~L~~~g-~~~  101 (110)
T TIGR01160        24 TSNYIHIRIQQRNGRKTLTTVQGLPK-EYDLKKIVKALKKEFACNGTVIEDPEMGEVIQLQGDQRKNVCEFLISQG-LLK  101 (110)
T ss_pred             ccceEEEEEEEccCCccEEEEeccCC-hHHHHHHHHHHHHHhCCCceEEeCCCCCCEEEEeCcHHHHHHHHHHHcC-CCC
Confidence            35689999999999999999999995 9999999999999999999999888888999999999999999999983 478


Q ss_pred             CCcEEEc
Q 029752          173 ETAIFFI  179 (188)
Q Consensus       173 ~~~I~~~  179 (188)
                      +++|.+-
T Consensus       102 ~~~i~vh  108 (110)
T TIGR01160       102 KDQIKIH  108 (110)
T ss_pred             HHHeeec
Confidence            9999774

Alternate name: MOF2. A similar protein family (see TIGRFAMs model TIGR01158) is found in prokaryotes. The human proteins complements a yeast SUI1 mutatation.

>PRK00939 translation initiation factor Sui1; Reviewed

Probab=99.89  E-value=2.4e-23  Score=156.84  Aligned_cols=77  Identities=26%  Similarity=0.404  Sum_probs=72.3

Q ss_pred             CCcEEEEEEeecCCeeEEEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCC
Q 029752           94 KKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPE  173 (188)
Q Consensus        94 ~~~I~I~~~~R~grK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~  173 (188)
                      .+.|+|++++|+|+|+||+|+||+.|++|+++||+.|+++|||||||     .+++|+|||||+++|.+||.+.  |+|.
T Consensus        23 ~~~i~I~~ekr~~gK~VTiI~Gl~~~~~~lk~l~k~lKk~~gcGgsv-----k~~~I~iQGD~r~~v~~~L~~~--G~~~   95 (99)
T PRK00939         23 QQRIKIKVDKRRYGKEVTIIEGIDPKDIDLKELAKKLKSKLACGGTV-----KDGRIELQGDHRERVKELLIKM--GFSE   95 (99)
T ss_pred             CceEEEEEEecCCCceEEEEeCCCCcchhHHHHHHHHHHHhCCCceE-----ECCEEEEeCcHHHHHHHHHHHc--CCCh
Confidence            37999999999999999999999999999999999999999999999     4568999999999999999985  9999


Q ss_pred             CcEE
Q 029752          174 TAIF  177 (188)
Q Consensus       174 ~~I~  177 (188)
                      ++|+
T Consensus        96 ~~i~   99 (99)
T PRK00939         96 ENIE   99 (99)
T ss_pred             hhcC
Confidence            9985

>TIGR01158 SUI1_rel translation initation factor SUI1, putative, prokaryotic

Probab=99.85  E-value=3.2e-21  Score=145.76  Aligned_cols=77  Identities=26%  Similarity=0.446  Sum_probs=71.9

Q ss_pred             CCCcEEEEEEee-cCCeeEEEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCC
Q 029752           93 DKKEVVIEKVVR-NKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDV  171 (188)
Q Consensus        93 ~~~~I~I~~~~R-~grK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~i  171 (188)
                      ..+.|+|++++| +|+|.||+|+||+.|++||++||+.|+++|||||||     .+++|+|||||++.|.+||.+.  |+
T Consensus        22 ~~~~i~i~~e~rgr~gK~VTvV~Gl~~~~~~l~~l~k~LKk~~gcGgtv-----k~~~IeiQGD~~~~v~~~L~~~--G~   94 (101)
T TIGR01158        22 EDQVVRIQRETRGRKGKGVTIIEGLDLSDIDLKELAKELKSKCGCGGTV-----KDGVIEIQGDHRDRVKDLLEKK--GF   94 (101)
T ss_pred             CCceEEEEEEEecCCCCEEEEEeCCcCchhhHHHHHHHHHHHhcCCeeE-----eCCEEEEeCcHHHHHHHHHHHc--CC
Confidence            467999999999 799999999999999999999999999999999999     5679999999999999999986  99


Q ss_pred             CCCcE
Q 029752          172 PETAI  176 (188)
Q Consensus       172 p~~~I  176 (188)
                      |.++|
T Consensus        95 ~~k~~   99 (101)
T TIGR01158        95 KVKLI   99 (101)
T ss_pred             Ceeec
Confidence            88765

This family of archaeal and bacterial proteins is homologous to the eukaryotic translation intiation factor SUI1 involved in directing the ribosome to the proper start site of translation by functioning in concert with eIF-2 and the initiator tRNA-Met.

>KOG1770 consensus Translation initiation factor 1 (eIF-1/SUI1) [Translation, ribosomal structure and biogenesis]

Probab=99.81  E-value=7e-20  Score=138.31  Aligned_cols=86  Identities=31%  Similarity=0.411  Sum_probs=79.9

Q ss_pred             CCCCcEEEEEEeecCCeeEEEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCC
Q 029752           92 KDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDV  171 (188)
Q Consensus        92 ~~~~~I~I~~~~R~grK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~i  171 (188)
                      +....|||++++|+|||++|+|.||.. ..|++.+.+.|++.|||+|+|+++|.-++.|++|||++..|.+||...- .+
T Consensus        25 g~~~~ihIRIQQRnGrKtlTtVQgi~~-Eyd~kril~~lKKef~CnGtvved~e~gevIQLqGDqR~nv~~fl~~~g-~~  102 (112)
T KOG1770|consen   25 GTEKYIHIRIQQRNGRKTLTTVQGIPM-EYDLKKILKSLKKEFACNGTVVEDPEYGEVIQLQGDQRKNVCQFLVQVG-LV  102 (112)
T ss_pred             CccceEEEEEEeeCCceEEEEecCChh-hhhHHHHHHHHHHhccCCCeEecCcccCceEEeccchhhhHHHHHHHhc-cc
Confidence            344599999999999999999999998 8999999999999999999999999999999999999999999999985 78


Q ss_pred             CCCcEEEc
Q 029752          172 PETAIFFI  179 (188)
Q Consensus       172 p~~~I~~~  179 (188)
                      .+++|.+-
T Consensus       103 k~~~ikih  110 (112)
T KOG1770|consen  103 KKDNIKIH  110 (112)
T ss_pred             cccceeec
Confidence            89998874

>KOG2522 consensus Filamentous baseplate protein Ligatin, contains PUA domain [Translation, ribosomal structure and biogenesis]

Probab=99.79  E-value=9.6e-20  Score=166.23  Aligned_cols=98  Identities=24%  Similarity=0.382  Sum_probs=93.1

Q ss_pred             CCCCCCCcEEEEEEeecCCeeEEEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCC-CCceEEEcCCchHHHHHHHHhh
Q 029752           89 IKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPT-EKEQIDVQGDISYDIVEFITDT  167 (188)
Q Consensus        89 ~kk~~~~~I~I~~~~R~grK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~-~~~eI~iQGD~~~~v~~~L~~~  167 (188)
                      .+|+..++|.|.+++|.|||.||+|+||+.|+||+..+|..|+++|+||.||...|+ ++-+|+|||+|.+.|+++|.+.
T Consensus       461 vkKgs~ppi~i~te~RagnKkVT~V~nle~fgiDp~S~aa~Lqk~c~aSTtv~e~pg~kg~eVqvQGnqih~iadlL~k~  540 (560)
T KOG2522|consen  461 VKKGSLPPIKIITEMRAGNKKVTRVSNLEVFGIDPESLAADLQKICSASTTVSESPGFKGAEVQVQGNQIHSIADLLNKS  540 (560)
T ss_pred             eecCCCCceEEeehhhccCceEEEEccceeeccCHHHHHHHHHHHeeeeeecccCCCCCCceEEEecchhhHHHHHHHHh
Confidence            679999999999999999999999999999999999999999999999999988886 4579999999999999999999


Q ss_pred             CCCCCCCcEEEcccccCCCC
Q 029752          168 WPDVPETAIFFIEDGKKVPA  187 (188)
Q Consensus       168 ~~~ip~~~I~~~~~~Kkkk~  187 (188)
                      | |||.++|+++++.+|||+
T Consensus       541 y-gipkK~I~gleka~Kkkk  559 (560)
T KOG2522|consen  541 Y-GIPKKWIDGLEKAKKKKK  559 (560)
T ss_pred             h-CCCHHHHhHHHHhhcccC
Confidence            9 999999999999988875

>PRK06824 translation initiation factor Sui1; Validated

Probab=99.77  E-value=1.1e-18  Score=135.25  Aligned_cols=73  Identities=19%  Similarity=0.311  Sum_probs=66.0

Q ss_pred             CCcEEEEEEee-cCCeeEEEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCC
Q 029752           94 KKEVVIEKVVR-NKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVP  172 (188)
Q Consensus        94 ~~~I~I~~~~R-~grK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip  172 (188)
                      ...|+|++++| +++|.||+|+||+....||++|||.|+++|||||||     ++++|+|||||++.|.+||.+.  |+.
T Consensus        40 ~~~vri~~~~kgr~gK~VTvI~Gl~~~~~dlk~l~K~LKkk~gcGGtv-----kd~~IeiQGD~r~~v~~~L~~~--G~~  112 (118)
T PRK06824         40 DGIVRVRRETKGRGGKTVTVITGVPLAEDALKELAKELKRRCGTGGTL-----KDGVIEIQGDHVELLLAELLKR--GFK  112 (118)
T ss_pred             CceEEEEEEEccCCCceEEEEeCCcCCHHHHHHHHHHHHHHhcCCceE-----ecCEEEEcCcHHHHHHHHHHHC--CCe
Confidence            45899988865 688999999999999999999999999999999999     5689999999999999999987  665


Q ss_pred             C
Q 029752          173 E  173 (188)
Q Consensus       173 ~  173 (188)
                      .
T Consensus       113 ~  113 (118)
T PRK06824        113 A  113 (118)
T ss_pred             E
Confidence            3

>PRK07451 translation initiation factor Sui1; Validated

Probab=99.76  E-value=1.5e-18  Score=133.91  Aligned_cols=74  Identities=20%  Similarity=0.359  Sum_probs=63.9

Q ss_pred             CCCcEEEEEEe-ecCCeeEEEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCC
Q 029752           93 DKKEVVIEKVV-RNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDV  171 (188)
Q Consensus        93 ~~~~I~I~~~~-R~grK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~i  171 (188)
                      ..+.|.|++++ ++++|.||+|.||+.+..||++|||.|+++|||||||     ++++|+|||||+++|.+||.+.  |+
T Consensus        36 ~~~~irI~~~r~gR~GK~VTvV~Gl~~~~~dlk~LaK~LK~k~gcGGtv-----kd~~IelQGD~r~~v~~~L~~~--Gf  108 (115)
T PRK07451         36 QQQNLRVQATRSGRKGKTVTVITGFQHKPETLAKLLKQLKTQCGSGGTV-----KDNTIEIQGDHRQKILEILIKL--GY  108 (115)
T ss_pred             cceeEEEEEEecCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhcCCceE-----cCCEEEEcCcHHHHHHHHHHHC--CC
Confidence            45667777543 3356999999999999999999999999999999999     6779999999999999999987  66


Q ss_pred             CC
Q 029752          172 PE  173 (188)
Q Consensus       172 p~  173 (188)
                      ..
T Consensus       109 ~~  110 (115)
T PRK07451        109 KA  110 (115)
T ss_pred             eE
Confidence            53

>PRK09019 translation initiation factor Sui1; Validated

Probab=99.75  E-value=3.6e-18  Score=130.43  Aligned_cols=73  Identities=23%  Similarity=0.338  Sum_probs=63.9

Q ss_pred             CCCcEEEEEEee-cCCeeEEEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCC
Q 029752           93 DKKEVVIEKVVR-NKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDV  171 (188)
Q Consensus        93 ~~~~I~I~~~~R-~grK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~i  171 (188)
                      ....|.|++++. +++|.||+|+||+....||++|||.|+++|||||||     .+++|+|||||++.|.+||.+.  |+
T Consensus        29 ~~~~vri~~~r~gRkGK~VTiI~Gl~~~~~dlk~l~K~lKkk~gcGGtv-----k~~~IelQGD~r~~v~~~L~~~--Gf  101 (108)
T PRK09019         29 GDGIVRIQRQTSGRKGKGVCLITGLDLDDAELKKLAAELKKKCGCGGAV-----KDGVIEIQGDKRDLLKSLLEAK--GM  101 (108)
T ss_pred             cCceEEEEEecCCCCCCeEEEEeCCcCCHHHHHHHHHHHHHHhcCCCeE-----EcCEEEEcCcHHHHHHHHHHHC--CC
Confidence            456788887653 355899999999988999999999999999999999     5689999999999999999987  66


Q ss_pred             C
Q 029752          172 P  172 (188)
Q Consensus       172 p  172 (188)
                      .
T Consensus       102 ~  102 (108)
T PRK09019        102 K  102 (108)
T ss_pred             e
Confidence            4

>PF05046 Img2: Mitochondrial large subunit ribosomal protein (Img2); InterPro: IPR007740 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms

Probab=97.75  E-value=0.00016  Score=53.27  Aligned_cols=65  Identities=17%  Similarity=0.267  Sum_probs=50.9

Q ss_pred             cEEEEEEeecCCeeEEEEeccCCCCCcHHHHHHHHhhhcccce------eEeeCCCCCceEEEcCCchHHHHHHHHhh
Q 029752           96 EVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGA------SVVKGPTEKEQIDVQGDISYDIVEFITDT  167 (188)
Q Consensus        96 ~I~I~~~~R~grK~VT~V~GLe~f~idlk~laK~lkkkfacg~------SV~k~~~~~~eI~iQGD~~~~v~~~L~~~  167 (188)
                      +|.... +++|++.+|+|+.++.   |+..|.+.|++.+.-..      .|.   .-.+.|+|+||+..+|.+||.++
T Consensus        15 PVY~~~-k~~g~~~~T~IrkI~G---D~~aL~~dL~~~l~~~~~~~~~~~V~---~~~g~i~IkG~~~~~Vk~wL~~~   85 (87)
T PF05046_consen   15 PVYLDI-KNGGNRKITVIRKIEG---DIWALKKDLRKFLGEKPKKKIDVRVN---ELTGHIEIKGDHVEEVKKWLLEK   85 (87)
T ss_pred             cEEEEE-eCCCcEeEEEEEeecC---CHHHHHHHHHHHhhhhcCCCcceEEe---ecCCEEEEcCccHHHHHHHHHHC
Confidence            444443 3457899999999998   89999999999886433      331   24579999999999999999876

The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family of proteins has been identified as part of the mitochondrial large ribosomal subunit in Saccharomyces cerevisiae [].; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome

>smart00653 eIF2B_5 domain present in translation initiation factor eIF2B and eIF5

Probab=93.67  E-value=0.19  Score=38.58  Aligned_cols=66  Identities=12%  Similarity=0.086  Sum_probs=49.3

Q ss_pred             CcEEEEEEeecCCeeEEEEeccCCC----CCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhC
Q 029752           95 KEVVIEKVVRNKRKCITTVKGLELF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW  168 (188)
Q Consensus        95 ~~I~I~~~~R~grK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~  168 (188)
                      ++..+.++.++    -|+|.+|...    .-++.-+.+.|..-+|+.|++    .+.+..+|+|.+.....+-++..|
T Consensus         7 p~~~v~~eG~~----kTvi~Nf~~I~~~L~R~p~hv~kyl~~ELgt~g~i----d~~~rlii~G~~~~~~i~~~l~~y   76 (110)
T smart00653        7 PPPQVLREGKG----KTVIVNFADIAKALNRPPDHVLKFLLAELGTQGSI----DGKGRLIVNGRFTPKKLQDLLRRY   76 (110)
T ss_pred             CCCeEEEEcCC----eEEEEcHHHHHHHHCCCHHHHHHHHHHHhCCceeE----CCCCeEEEEEeeCHHHHHHHHHHH
Confidence            44555554443    6888898753    458999999999999999999    344899999998776666555554

>KOG4034 consensus Uncharacterized conserved protein NOF (Neighbor of FAU) [Function unknown]

Probab=93.67  E-value=0.17  Score=41.43  Aligned_cols=71  Identities=15%  Similarity=0.200  Sum_probs=46.3

Q ss_pred             CCCcEEEEEEeecCCeeEEEEeccCCCCCcHHHHHHHHhhhc--ccceeEeeC-CCCCceEEEcCCchHHHHHHHHhh
Q 029752           93 DKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKF--ATGASVVKG-PTEKEQIDVQGDISYDIVEFITDT  167 (188)
Q Consensus        93 ~~~~I~I~~~~R~grK~VT~V~GLe~f~idlk~laK~lkkkf--acg~SV~k~-~~~~~eI~iQGD~~~~v~~~L~~~  167 (188)
                      ..-+|...+..| |+|.+|+|+.++.   |.-.|-+.|...+  .=+.|+... ..-.+.|.+-||+.+.|.+||.++
T Consensus        94 hnlPVYl~~k~~-G~k~lT~IRkVeG---Di~aLe~DL~s~L~~~~~~s~~t~VnelsgqI~~~g~~v~~vr~~L~eK  167 (169)
T KOG4034|consen   94 HNLPVYLDYKQR-GNKILTVIRKVEG---DIWALENDLRSTLEMSPKKSYATHVNELSGQIVLKGNHVDTVREWLQEK  167 (169)
T ss_pred             CCcceEEeeecC-CcEEEEEEEeecc---cHHHHHHHHHHHHhhccCCChhhhhhhhcceEEEeCChHHHHHHHHHHc
Confidence            344566665444 8899999999997   4444444444322  223333211 123479999999999999999987

>PRK03988 translation initiation factor IF-2 subunit beta; Validated

Probab=93.40  E-value=0.16  Score=40.54  Aligned_cols=65  Identities=15%  Similarity=0.196  Sum_probs=49.7

Q ss_pred             CCcEEEEEEeecCCeeEEEEeccCCC----CCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhC
Q 029752           94 KKEVVIEKVVRNKRKCITTVKGLELF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW  168 (188)
Q Consensus        94 ~~~I~I~~~~R~grK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~  168 (188)
                      .++..+.++.   +|  |+|.+|...    .-+..-+.+.|..-+|+.|++     .++..+|+|.+.....+-++..|
T Consensus        30 ~p~~~v~~eG---~k--Tvi~Nf~~I~~~L~R~~~hv~ky~~~ELgt~g~i-----~~~~lii~G~~~~~~i~~~L~~y   98 (138)
T PRK03988         30 VPKPDVRIEG---NR--TIIRNFKEIADRLNRDPKHVAKFLLKELGTAGNI-----EGGRLILQGKFSPRVINEKIDRY   98 (138)
T ss_pred             CCCCeEEEEc---Cc--EEEecHHHHHHHHCCCHHHHHHHHHHHhCCceee-----cCCEEEEEEeeCHHHHHHHHHHH
Confidence            4555555544   44  899998763    458999999999999999999     34899999998777666655554

>TIGR00311 aIF-2beta translation initiation factor aIF-2, beta subunit, putative

Probab=93.23  E-value=0.16  Score=40.26  Aligned_cols=65  Identities=14%  Similarity=0.139  Sum_probs=49.4

Q ss_pred             CCcEEEEEEeecCCeeEEEEeccCCC----CCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhC
Q 029752           94 KKEVVIEKVVRNKRKCITTVKGLELF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW  168 (188)
Q Consensus        94 ~~~I~I~~~~R~grK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~  168 (188)
                      .++..+.++   |+|  |+|.+|...    .-+..-+.|.|..-||+.|++     .++..+|+|.+.....+-++..|
T Consensus        25 mP~~~v~~e---G~k--Tvi~Nf~~Ia~~L~R~~~~v~ky~~~ELgt~g~i-----~~~rlii~G~~~~~~i~~~L~~y   93 (133)
T TIGR00311        25 VPKAYIVIE---GNR--TIIQNFREVAKALNRDEQHLLKYLLKELGTAGNL-----EGGRLILQGKFTHFLLNERIEDY   93 (133)
T ss_pred             CCCceEEEE---cCc--EEEecHHHHHHHHCCCHHHHHHHHHHHhCCCcee-----cCCEEEEEeecCHHHHHHHHHHH
Confidence            455555555   444  999998753    457899999999999999999     34789999998877666555554

>PRK14434 acylphosphatase; Provisional

Probab=93.04  E-value=0.47  Score=35.08  Aligned_cols=68  Identities=18%  Similarity=0.167  Sum_probs=51.2

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcc-cceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCC-CCcEEEc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFA-TGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVP-ETAIFFI  179 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfa-cg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip-~~~I~~~  179 (188)
                      -.|+|.-. |+-..-+...++++++ -.|.|...+.|.-+|.+||+-.+.|..|+.....+-| ...|+-+
T Consensus         6 i~v~G~VQ-GVGFR~fv~~~A~~lg~l~G~V~N~~dGsVei~~qG~~~~~l~~f~~~l~~g~pp~a~V~~v   75 (92)
T PRK14434          6 MIVSGRVQ-GVGFRYSVYSLALEIGDIYGRVWNNDDGTVEILAQSDDSAKLAKFIQEIRKGPSKWAKVTYV   75 (92)
T ss_pred             EEEEEeec-ceeEhHHHHHHHHHcCCcEEEEEECCCCCEEEEEEcCCHHHHHHHHHHHhcCCCCCEEEEEE
Confidence            34677776 7888999999999999 9999977776668999999866666666665554554 5556544

>PRK14444 acylphosphatase; Provisional

Probab=92.95  E-value=0.58  Score=34.49  Aligned_cols=67  Identities=9%  Similarity=0.099  Sum_probs=48.9

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~  179 (188)
                      -+|+|.-. |+-...++..++.+++=+|.|...+.|.-+|++||+- +.|.+|+.....+-|...|+-+
T Consensus         8 i~v~G~VQ-GVGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~qG~~-~~i~~f~~~l~~gp~~a~V~~i   74 (92)
T PRK14444          8 VFISGRVQ-GVNFRAYTRDRAREAGVKGWVRNLSDGRVEAVFEGSR-PAVQKMISWCYSGPSHARVERV   74 (92)
T ss_pred             EEEEEeeC-CcCcHHHHHHHHHHhCCEEEEEECCCCcEEEEEEcCH-HHHHHHHHHHHhCCCCcEEEEE
Confidence            45678777 8888999999999999999997776666799999994 3466666554323334455544

>PRK14451 acylphosphatase; Provisional

Probab=92.64  E-value=0.59  Score=34.30  Aligned_cols=66  Identities=15%  Similarity=0.098  Sum_probs=49.6

Q ss_pred             EeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEcc
Q 029752          113 VKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIE  180 (188)
Q Consensus       113 V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~~  180 (188)
                      |+|.-. |+-...+...++.+++-.|.|...+.|.-+|.+||+- +.|.+|+.....+-|...|+-++
T Consensus         9 V~G~VQ-GVGFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~-~~i~~f~~~l~~gp~~a~V~~v~   74 (89)
T PRK14451          9 ISGRVQ-GVWFRASAKKLAEQLMISGWARNLADGRVEVFACGKE-DKLEEFYTWLQKGPLNARVDVCT   74 (89)
T ss_pred             EEEeeC-CcCchHHHHHHHHHhCCEEEEEECCCCCEEEEEEECH-HHHHHHHHHHhhCCCceEEEEEE
Confidence            778776 8889999999999999999998777777899999986 33666665544343445555443

>PRK14449 acylphosphatase; Provisional

Probab=92.45  E-value=0.65  Score=34.03  Aligned_cols=68  Identities=15%  Similarity=0.061  Sum_probs=51.2

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEcc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIE  180 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~~  180 (188)
                      -+|+|.-. |+-...+...++.+++-.|.|...+.+.-+|.+||+- +.|.+|+.....+-|...|+-++
T Consensus         7 i~v~G~VQ-GVGFR~fv~~~A~~lgl~G~V~N~~dG~Vei~~~G~~-~~v~~f~~~l~~~~~~a~V~~i~   74 (90)
T PRK14449          7 LRITGHVQ-GVGLRYSVYQKAVSLGITGYAENLYDGSVEVVAEGDE-ENIKELINFIKTGLRWARVDNVE   74 (90)
T ss_pred             EEEEEeec-CcChHHHHHHHHHHcCCEEEEEECCCCeEEEEEEeCH-HHHHHHHHHHhhCCCceEEEEEE
Confidence            45677665 8888999999999999999998777777899999986 34677766554344555565543

>PRK14425 acylphosphatase; Provisional

Probab=92.02  E-value=0.59  Score=34.62  Aligned_cols=68  Identities=16%  Similarity=0.153  Sum_probs=48.0

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEcc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIE  180 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~~  180 (188)
                      -.|+|.-. |+-.......++.+++-.|.|...+.|.-+|++||+-.. |.+|+.....+=|...|+-++
T Consensus        10 ~~v~G~VQ-GVGFR~~v~~~A~~~gl~G~V~N~~dGsVei~~qG~~~~-le~f~~~l~~gp~~a~V~~i~   77 (94)
T PRK14425         10 VRITGRVQ-GVGFRDWTRDEAERLGLTGWVRNESDGSVTALIAGPDSA-ISAMIERFRRGPPGASVSGVE   77 (94)
T ss_pred             EEEEEeEe-cccchHHHHHHHHHhCCEEEEEECCCCeEEEEEEeCHHH-HHHHHHHHhhCCCceEEEEEE
Confidence            34567666 788899999999999999999877777789999997553 444444433233445554443

>PRK14437 acylphosphatase; Provisional

Probab=91.87  E-value=0.72  Score=35.28  Aligned_cols=66  Identities=18%  Similarity=0.240  Sum_probs=49.0

Q ss_pred             EEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEc
Q 029752          112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       112 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~  179 (188)
                      .|+|.-. |+-+..+...++.+++-.|.|...+.|.-+|.+||+.. .|.+|+.....+-|...|+-+
T Consensus        28 ~V~G~VQ-GVGFR~fv~~~A~~lgL~G~V~N~~dG~Vei~~qG~~~-~ie~f~~~L~~gP~~a~V~~i   93 (109)
T PRK14437         28 TVSGKVQ-GVFFRESVRKKAEELQLTGWVKNLSHGDVELVACGERD-SIMILTEWLWEGPPQAAVSNV   93 (109)
T ss_pred             EEEEecC-CcCchHHHHHHHHHhCCeEEEEECCCCCEEEEEEECHH-HHHHHHHHHHhCCCceEEEEE
Confidence            4677777 88889999999999999999988777778999999865 455555444323344555444

>PRK14436 acylphosphatase; Provisional

Probab=91.69  E-value=0.9  Score=33.46  Aligned_cols=67  Identities=16%  Similarity=0.165  Sum_probs=49.6

Q ss_pred             EEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEcc
Q 029752          112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIE  180 (188)
Q Consensus       112 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~~  180 (188)
                      .|+|.-. |+-...+...++.+++=.|.|...+.+.-+|++||+- +.|.+|+.....+-|...|+-++
T Consensus         9 ~v~G~VQ-GVGFR~~v~~~A~~l~l~G~V~N~~dG~Vei~~qG~~-~~i~~f~~~l~~gp~~a~V~~v~   75 (91)
T PRK14436          9 RIYGRVQ-GVGFRWSMQREARKLGVNGWVRNLPDGSVEAVLEGDE-ERVEALIGWAHQGPPLARVTRVE   75 (91)
T ss_pred             EEEEeeC-CcCcHHHHHHHHHHcCCEEEEEECCCCcEEEEEEcCH-HHHHHHHHHHhhCCCceEEEEEE
Confidence            4567666 7888999999999999999998777777899999986 34666666544344455555543

>PRK14445 acylphosphatase; Provisional

Probab=91.09  E-value=0.86  Score=33.42  Aligned_cols=68  Identities=21%  Similarity=0.210  Sum_probs=49.5

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEcc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIE  180 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~~  180 (188)
                      -+|+|.-. |+-...+...++.+++-.|.|...+.|.-+|.+||+-.. |.+|+.....+=|...|+-++
T Consensus         8 ~~v~G~VQ-GVGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~-l~~f~~~l~~gP~~a~V~~i~   75 (91)
T PRK14445          8 LIVSGLVQ-GVGFRMFIDRAASELNLSGWVRNLPDGTVEIEAQGSSGM-IDELIKQAERGPSRSSVTSIM   75 (91)
T ss_pred             EEEEEEEc-CcCChHHHHHHHhhCCCEEEEEECCCCeEEEEEEECHHH-HHHHHHHHHhCCCCcEEEEEE
Confidence            35677766 788899999999999999999877777789999998633 666665544232345565543

>PRK14422 acylphosphatase; Provisional

Probab=91.09  E-value=1.2  Score=32.89  Aligned_cols=68  Identities=10%  Similarity=-0.001  Sum_probs=49.9

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEcc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIE  180 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~~  180 (188)
                      -.|+|.-. |+-...+...++.+++-.|.|...+.+.-+|.+||+-.. |.+|+.....+-|...|+-++
T Consensus        10 ~~v~G~VQ-GVGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~-i~~f~~~l~~gp~~a~V~~i~   77 (93)
T PRK14422         10 AWVHGHVQ-GVGFRWWTRSRALELGLTGYAANLADGRVQVVAEGPRAA-CEKLLQLLRGDDTPGRVDKVV   77 (93)
T ss_pred             EEEEEeeC-CcCcHHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHH-HHHHHHHHHhCCCCcEEEEEE
Confidence            35677766 888899999999999999999877777789999998654 666665544353444455443

>PRK14440 acylphosphatase; Provisional

Probab=91.06  E-value=1.2  Score=32.80  Aligned_cols=67  Identities=12%  Similarity=0.126  Sum_probs=48.3

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~  179 (188)
                      -+|+|.-. |+-...+...++.+++-.|.|...+.+.-+|.+||+- +.|.+|+.....+=|...|+-+
T Consensus         7 ~~v~G~VQ-GVGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~-~~v~~f~~~l~~gp~~a~V~~i   73 (90)
T PRK14440          7 ARVYGLVQ-GVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYE-EALSKLLERIKQGPPAAEVEKV   73 (90)
T ss_pred             EEEEEeEe-ccCchHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCH-HHHHHHHHHHhhCCCCcEEEEE
Confidence            35666665 7778889999999999999997777677899999986 5666666555434334445443

>PRK14438 acylphosphatase; Provisional

Probab=90.94  E-value=0.95  Score=33.25  Aligned_cols=68  Identities=19%  Similarity=0.200  Sum_probs=49.7

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEcc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIE  180 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~~  180 (188)
                      -.|+|.-. |+-...+...++.+++-.|.|...+.+.-+|.+||+- +.|.+|+.....+-|...|+-++
T Consensus         7 i~v~G~VQ-GVGFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~-~~i~~f~~~l~~gp~~a~V~~v~   74 (91)
T PRK14438          7 VTVKGLVQ-GVAFRHHTQQTAQRLNVSGWVKNLPNGSVQGCFEGEE-TDVAALIDWCHHGPSRARVSGVI   74 (91)
T ss_pred             EEEEEecC-CcCccHHHHHHHHHcCCEEEEEECCCCEEEEEEEECH-HHHHHHHHHHhhCCCCcEEEEEE
Confidence            45677776 7888999999999999999997777666799999985 44666665544343445555543

>PRK14446 acylphosphatase; Provisional

Probab=90.89  E-value=0.85  Score=33.53  Aligned_cols=67  Identities=10%  Similarity=0.174  Sum_probs=50.0

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~  179 (188)
                      -.|+|.=. |+-+.-+...++++++-.|.|...+.+.-+|++||+-. .|.+|+.....+-|...|+-+
T Consensus         6 i~v~G~VQ-GVGFR~fv~~~A~~lgl~G~V~N~~dGsVei~~qG~~~-~l~~f~~~l~~gP~~a~V~~v   72 (88)
T PRK14446          6 FVVSGVVQ-GVWYRASTRERAVALGLVGHARNQADGSVEVVAAGSAA-ALEALEAWLWQGPPAATVAAV   72 (88)
T ss_pred             EEEEEecC-CeeEhHHHHHHHeeCCeEEEEEECCCCCEEEEEEeCHH-HHHHHHHHHhhCCCceEEEEE
Confidence            34677776 88889999999999999999988887778999999853 555555544334455555544

>PRK14433 acylphosphatase; Provisional

Probab=90.83  E-value=1.1  Score=32.65  Aligned_cols=67  Identities=9%  Similarity=0.067  Sum_probs=49.5

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~  179 (188)
                      -+|+|.-. |+-.......++.+++-+|.|...+.+.-+|.+|||-. .|.+|+.....+=|...|.-+
T Consensus         5 i~v~G~VQ-GVGFR~~v~~~A~~~~l~G~V~N~~dG~Vei~~~G~~~-~i~~f~~~l~~gP~~a~V~~i   71 (87)
T PRK14433          5 ALVSGRVQ-GVGYRAFVQKKARELGLSGYAENLSDGRVEVVAEGPKE-ALERLLHWLRRGPRHARVEAV   71 (87)
T ss_pred             EEEEEeee-CcCchHHHHHHHHHcCCEEEEEECCCCCEEEEEEECHH-HHHHHHHHHhhCCCCcEEEEE
Confidence            35677655 78889999999999999999977777778999999964 677777665533333445443

>PRK14428 acylphosphatase; Provisional

Probab=90.78  E-value=1.2  Score=33.36  Aligned_cols=67  Identities=12%  Similarity=0.128  Sum_probs=49.8

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~  179 (188)
                      -.|+|.-. |+-..-+...++.+++-.|.|...+.|.-+|++||+- +.|.+||.....+=|...|+-+
T Consensus        12 i~v~G~VQ-GVGFR~fv~~~A~~lgL~G~V~N~~dGsVei~~qG~~-~~i~~fi~~l~~gP~~a~V~~v   78 (97)
T PRK14428         12 IVVTGLVQ-GVGFRYFTVTQARRLGVQGWVRNCRDGSVELEAQGSS-DAVQALVEQLAIGPRWSEVSHV   78 (97)
T ss_pred             EEEEEecC-CccchHHHHHHHHHcCCEEEEEECCCCEEEEEEEcCH-HHHHHHHHHHhhCCCccEEEEE
Confidence            35677776 8888999999999999999997777777899999985 5566666655423344455443

>PRK14429 acylphosphatase; Provisional

Probab=90.78  E-value=1  Score=33.01  Aligned_cols=67  Identities=18%  Similarity=0.146  Sum_probs=48.1

Q ss_pred             EEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEcc
Q 029752          112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIE  180 (188)
Q Consensus       112 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~~  180 (188)
                      .|+|.-. |+-.......++.+++-.|.|...+.|.-+|++||+-.. |.+|+.....+-|...|.-++
T Consensus         7 ~v~G~VQ-GVGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~-i~~f~~~l~~gp~~a~V~~i~   73 (90)
T PRK14429          7 KLTGKVQ-GVGCRRATLTKARALGVTGYVTNCEDGSVEILAQGSDPA-VDNLIAWCEVGVPCTEVLRVT   73 (90)
T ss_pred             EEEEeec-CeeeHHHHHHHHHHhCCEEEEEECCCCeEEEEEEeCHHH-HHHHHHHHhhCCCceEEEEEE
Confidence            4566665 788889999999999999999877767789999998643 555555443353444555443

>PRK14443 acylphosphatase; Provisional

Probab=90.73  E-value=1  Score=33.52  Aligned_cols=67  Identities=16%  Similarity=0.186  Sum_probs=48.4

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCC-CCcEEEc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVP-ETAIFFI  179 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip-~~~I~~~  179 (188)
                      -.|+|.-. |+-....+..++.+++-.|.|...+.+.-+|.+||+-.. |.+|+.....+-| ...|+-+
T Consensus         8 i~v~G~VQ-GVGFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~-l~~f~~~l~~g~p~~a~V~~v   75 (93)
T PRK14443          8 LRVTGFVQ-GVGFRYTTKHVAYKYDISGTVKNLDDGSVEIHAIAEEEN-LNKFIDAIKKGPSPGCRIEHV   75 (93)
T ss_pred             EEEEEeeC-CccCcHHHHHHHHHcCCEEEEEECCCCEEEEEEECCHHH-HHHHHHHHhcCCCCcEEEEEE
Confidence            34667766 788899999999999999999777777789999998433 5555554443543 4444443

>PRK14420 acylphosphatase; Provisional

Probab=90.73  E-value=1.2  Score=32.55  Aligned_cols=68  Identities=15%  Similarity=0.080  Sum_probs=49.7

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEcc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIE  180 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~~  180 (188)
                      -.|+|.-. |+-.......++.+++=.|.|...+.+.-+|.+||+- +.|.+|+.....+-|...|.-++
T Consensus         6 ~~v~G~VQ-GVGFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~-~~i~~f~~~l~~~p~~a~V~~i~   73 (91)
T PRK14420          6 IIVDGRVQ-GVGFRYFVQMEADKRKLTGWVKNRDDGTVEIEAEGPE-EALQLFLDAIEKGSPFSKVTDVH   73 (91)
T ss_pred             EEEEEeeC-CcCChHHHHHHHHHcCCEEEEEECCCCcEEEEEEECH-HHHHHHHHHHHhCCCCCEEEEEE
Confidence            34566665 7778889999999999999998777677899999984 66777766554453444555543

>PF01873 eIF-5_eIF-2B: Domain found in IF2B/IF5; InterPro: IPR002735 The beta subunit of archaeal and eukaryotic translation initiation factor 2 (IF2beta) and the N-terminal domain of translation initiation factor 5 (IF5) show significant sequence homology []

Probab=90.66  E-value=0.25  Score=38.71  Aligned_cols=68  Identities=15%  Similarity=0.160  Sum_probs=48.1

Q ss_pred             CCCcEEEEEEeecCCeeEEEEeccCCC----CCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhC
Q 029752           93 DKKEVVIEKVVRNKRKCITTVKGLELF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW  168 (188)
Q Consensus        93 ~~~~I~I~~~~R~grK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~  168 (188)
                      ..+++.|.++.+    .=|+|.+|...    .-|+.-+++.|..-+|+.|++    .+.+..+|+|.+...-.+-++..|
T Consensus        18 kmP~~~v~~eG~----~KTvi~Nf~dI~~~L~R~p~~~~ky~~~ELgt~~~i----d~~~~lii~G~~~~~~i~~~L~~f   89 (125)
T PF01873_consen   18 KMPPPQVKIEGK----KKTVIVNFVDICKALNRDPEHVLKYFGKELGTQGSI----DGKGRLIINGRFSSKQIQDLLDKF   89 (125)
T ss_dssp             CCCT--EEEETS----TEEEETTHHHHHHHHTSSHHHHHHHHHHHSSSEEEE----ETTTEEEEESSSSCCHHHHHHHHH
T ss_pred             ecCCCeEEEEcc----ceeeeecHHHHHHHHCCCHHHHHHHHHHHHCCceEE----CCCCEEEEEEecCHHHHHHHHHHH
Confidence            356666766555    45888888763    348999999999999999999    234899999997655444443333

Archaeal IF2beta contains two independent structural domains: an N-terminal mixed alpha/beta core domain (topological similarity to the common core of ribosomal proteins L23 and L15e), and a C-terminal domain consisting of a zinc-binding C4 finger []. Archaeal IF2beta is a ribosome-dependent GTPase that stimulates the binding of initiator Met-tRNA(i)(Met) to the ribosomes, even in the absence of other factors []. The C-terminal domain of eukaryotic IF5 is involved in the formation of the multi-factor complex (MFC), an important intermediate for the 43S pre-initiation complex assembly []. IF5 interacts directly with IF1, IF2beta and IF3c, which together with IF2-bound Met-tRNA(i)(Met) form the MFC. This entry represents both the N-terminal and zinc-binding domains of IF2, as well as a domain in IF5.; GO: 0003743 translation initiation factor activity, 0006413 translational initiation; PDB: 2DCU_B 2D74_B 2E9H_A 2G2K_A 1NEE_A 3CW2_L 2QMU_C 3V11_C 2NXU_A 2QN6_C ....

>PRK14442 acylphosphatase; Provisional

Probab=90.64  E-value=1.3  Score=32.65  Aligned_cols=67  Identities=10%  Similarity=0.051  Sum_probs=48.8

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~  179 (188)
                      -+|+|.-. |+-.......++.+++=.|.|...+.|.-+|++||+.. .|.+|+.....+=|...|+-+
T Consensus         8 ~~v~G~VQ-GVGFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~-~i~~f~~~l~~gp~~a~V~~v   74 (91)
T PRK14442          8 AYVGGRVQ-GVGFRQATREEADRLELDGWVRNLDDGRVEVVWEGEED-RAKALERWLGRGPRHAEVSAV   74 (91)
T ss_pred             EEEEEecC-CccccHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHH-HHHHHHHHHhhCCCCeEEEEE
Confidence            35677777 88889999999999999999987777778999999865 366665544323233444443

>PRK14452 acylphosphatase; Provisional

Probab=90.63  E-value=1.5  Score=33.41  Aligned_cols=67  Identities=10%  Similarity=0.063  Sum_probs=49.5

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~  179 (188)
                      -.|+|.-. |+-+..+...++.+++-.|.|...+.|.-+|.+||+.. .|.+|+.-...+-|...|+-+
T Consensus        24 i~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dGsVeI~~qG~~~-~ve~F~~~l~~gP~~A~V~~v   90 (107)
T PRK14452         24 FLIEGRVQ-GVGFRASCCRRALDLGLSGWVRNLSDGSVEVQAEGPPL-ALSELRAWCERGPPGARVKRV   90 (107)
T ss_pred             EEEEEeec-CcChhHHHHHHHHHhCCEEEEEECCCCCEEEEEEcCHH-HHHHHHHHHhcCCCCcEEEEE
Confidence            46678777 88899999999999999999987777778999999954 566664333323344455443

>PRK14435 acylphosphatase; Provisional

Probab=90.45  E-value=1.2  Score=32.59  Aligned_cols=67  Identities=16%  Similarity=0.274  Sum_probs=48.9

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~  179 (188)
                      -+|+|.-. |+-.......++.+++-.|.|...+.+.-+|++||+- +.|.+|+.....+=|...|+-+
T Consensus         6 ~~v~G~VQ-GVGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~-~~i~~f~~~l~~gp~~a~V~~v   72 (90)
T PRK14435          6 IRVEGIVQ-GVGFRYFTRRVAKSLGVKGYVMNMDDGSVFIHAEGDE-NALRRFLNEVAKGPPAAVVTNV   72 (90)
T ss_pred             EEEEEEeC-CcCChHHHHHHHHHhCCEEEEEECCCCCEEEEEEECH-HHHHHHHHHHhhCCCCcEEEEE
Confidence            35677766 7888999999999999999998877777899999986 3466666554423344444443

>PRK14427 acylphosphatase; Provisional

Probab=90.01  E-value=1.3  Score=32.79  Aligned_cols=68  Identities=10%  Similarity=0.062  Sum_probs=49.2

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEcc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIE  180 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~~  180 (188)
                      -.|+|.-. |+-...+...++.+++-.|.|...+.+.-+|++||+... |.+|+.....+=|...|+-++
T Consensus        10 i~v~G~VQ-GVGFR~fv~~~A~~lgl~G~V~N~~dGsVei~~qG~~~~-i~~f~~~l~~~p~~a~V~~i~   77 (94)
T PRK14427         10 ARVFGVVQ-GVGFRYWTMRKAEELGLTGTVRNLDDGSVALVAEGTGEQ-VEKLLDWLNSDRAPGRVERVD   77 (94)
T ss_pred             EEEEEEeC-CcCChHHHHHHHHHcCCEEEEEECCCCeEEEEEEECHHH-HHHHHHHHhhCCCCcEEEEEE
Confidence            34567666 788899999999999999999777767689999998743 666665554342344455443

>PRK14423 acylphosphatase; Provisional

Probab=89.83  E-value=1.3  Score=32.57  Aligned_cols=67  Identities=12%  Similarity=0.134  Sum_probs=48.6

Q ss_pred             EEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEcc
Q 029752          112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIE  180 (188)
Q Consensus       112 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~~  180 (188)
                      .|+|.-. |+-...+...++.+++-.|.|...+.|.-+|.+||+-. .|.+|+.....+-|...|+-++
T Consensus        10 ~v~G~VQ-GVGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~-~i~~f~~~l~~gp~~a~V~~v~   76 (92)
T PRK14423         10 FVSGRVQ-GVYYRASTRDTARELGVDGWVRNLDDGRVEAVFEGPRD-AVEAMVEWCHEGSPAAVVEDVE   76 (92)
T ss_pred             EEEEecC-CeeehHHHHHHHHHcCCEEEEEECCCCeEEEEEEECHH-HHHHHHHHHHhCCCceEEEEEE
Confidence            4567666 78889999999999999999977766667999999854 4666665544344544555443

>PRK14447 acylphosphatase; Provisional

Probab=89.75  E-value=1.5  Score=32.44  Aligned_cols=68  Identities=13%  Similarity=0.139  Sum_probs=48.1

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCC-CceEEEcCCchHHHHHHHHhhCCCCCCCcEEEcc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTE-KEQIDVQGDISYDIVEFITDTWPDVPETAIFFIE  180 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~-~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~~  180 (188)
                      -.|+|.-. |+-+.-+.+.++.+++-.|.|...+.| .-+|++||+ .+.|.+|+.....+=|...|+-++
T Consensus         8 ~~v~G~VQ-GVGFR~~~~~~A~~~gl~G~V~N~~dG~~Vei~~qG~-~~~l~~f~~~l~~gp~~a~V~~v~   76 (95)
T PRK14447          8 LFIRGKVQ-GVFFRQSMKEVANRNGVRGWVRNRSDGRTVEAVLEGP-RDAVLKVIEWARVGPPGARVEDVE   76 (95)
T ss_pred             EEEEEecC-CccchHHHHHHHhhcCeEEEEEECCCCCEEEEEEEeC-HHHHHHHHHHHhhCCCCeEEEEEE
Confidence            35678777 888899999999999999999777666 378999998 455555554332233444455443

>PRK14426 acylphosphatase; Provisional

Probab=89.44  E-value=1.8  Score=31.79  Aligned_cols=66  Identities=11%  Similarity=0.029  Sum_probs=47.7

Q ss_pred             EEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCC-CcEEEc
Q 029752          112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPE-TAIFFI  179 (188)
Q Consensus       112 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~-~~I~~~  179 (188)
                      +|+|.-. |+-.......++.+++-.|.|...+.+.-+|.+||+-. .|.+|+.....+.|+ ..|+-+
T Consensus         9 ~v~G~VQ-GVGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~-~i~~f~~~l~~g~P~~a~V~~i   75 (92)
T PRK14426          9 WVYGRVQ-GVGFRYHTQHEALKLGLTGYAKNLDDGSVEVVACGEEE-QVEKLMEWLKEGGPRSARVDRV   75 (92)
T ss_pred             EEEEeeC-CcCchHHHHHHHHHhCCEEEEEECCCCcEEEEEEeCHH-HHHHHHHHHhcCCCCCeEEEEE
Confidence            4567666 78889999999999999999977777778999999953 355555544435343 345544

>PRK12336 translation initiation factor IF-2 subunit beta; Provisional

Probab=89.26  E-value=0.83  Score=38.35  Aligned_cols=65  Identities=14%  Similarity=0.126  Sum_probs=48.9

Q ss_pred             CCcEEEEEEeecCCeeEEEEeccCCC----CCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhC
Q 029752           94 KKEVVIEKVVRNKRKCITTVKGLELF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW  168 (188)
Q Consensus        94 ~~~I~I~~~~R~grK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~  168 (188)
                      .++..+.++.   +|  |+|.+|...    .-+..-+.+.|..-||+.+++     .++..+|+|.+.....+-++..|
T Consensus        26 ~p~~~v~~eG---~k--T~i~N~~~i~~~l~R~~~~~~ky~~~ELgt~~~~-----~~~~~ii~G~~~~~~i~~~l~~y   94 (201)
T PRK12336         26 IPEPKIFIEG---KT--TILTNFGEIADALNRDPDHLMKFLQRELGTAGKI-----EGGRAVFNGKFTEEDIQAAIDAY   94 (201)
T ss_pred             cCCceEEEEc---Cc--EEEecHHHHHHHHCCCHHHHHHHHHHHhCCccee-----cCCEEEEEeeeCHHHHHHHHHHH
Confidence            4455555544   33  999998753    457999999999999999999     34689999998777666655554

>PRK14421 acylphosphatase; Provisional

Probab=89.20  E-value=1.7  Score=32.69  Aligned_cols=66  Identities=12%  Similarity=0.096  Sum_probs=47.6

Q ss_pred             EEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEc
Q 029752          112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       112 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~  179 (188)
                      +|+|.-. |+-...+...++.+++-.|.|...+.|.-+|++||+-.. |.+|+.....+=|...|+-+
T Consensus         9 ~v~G~VQ-GVGFR~fv~~~A~~lgL~G~V~N~~dG~Vei~~~G~~~~-i~~f~~~l~~gP~~a~V~~v   74 (99)
T PRK14421          9 TIRGRVQ-GVGYRAWVARTAEALGLEGWVRNRRDGSVEALFAGPADA-VAEMIARCRRGPSAARVDAV   74 (99)
T ss_pred             EEEEeEc-CccchHHHHHHHHHhCCEEEEEECCCCEEEEEEeCCHHH-HHHHHHHHHhCCCCcEEEEE
Confidence            4677766 788899999999999999999777767689999998643 55555544323334455444

>PRK14441 acylphosphatase; Provisional

Probab=89.15  E-value=1.9  Score=31.75  Aligned_cols=68  Identities=13%  Similarity=0.224  Sum_probs=47.8

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEcc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIE  180 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~~  180 (188)
                      -.|+|.=. |+-...+...++.+++=.|.|...+.+.-+|++||+-. .|..|+.....+=|...|.-++
T Consensus         9 i~v~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~qG~~~-~i~~f~~~l~~gp~~a~V~~v~   76 (93)
T PRK14441          9 IVVSGRVQ-GVAFRQSAADEARRLGVEGWVRNLPDGRVEAEAEGERA-AVGALVRWCHAGPPAARVDRVE   76 (93)
T ss_pred             EEEEEecC-CccchHHHHHHHhhcCcEEEEEECCCCEEEEEEEECHH-HHHHHHHHHhhCCCCcEEEEEE
Confidence            34577776 88889999999999999999977776668999999833 4555544332233445555543

>PF00708 Acylphosphatase: Acylphosphatase; InterPro: IPR001792 Acylphosphatase (3

Probab=88.97  E-value=1.4  Score=31.91  Aligned_cols=67  Identities=22%  Similarity=0.247  Sum_probs=47.7

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~  179 (188)
                      -+|+|.-. |+-...+++.++.+++-.|.|...+.+.-+|++||+- +.|.+||.....+-|...|.-+
T Consensus         8 i~v~G~VQ-GVgFR~~v~~~A~~~gl~G~V~N~~dg~V~i~~~G~~-~~l~~f~~~l~~g~p~a~V~~i   74 (91)
T PF00708_consen    8 IIVSGRVQ-GVGFRPFVKRIARKLGLTGWVRNLPDGSVEIEAEGEE-EQLEEFIKWLKKGPPPARVDEI   74 (91)
T ss_dssp             EEEEEETS-SSSHHHHHHHHHHHTT-EEEEEE-TTSEEEEEEEEEH-HHHHHHHHHHHHSSTTSEEEEE
T ss_pred             EEEEEEEC-cCChhHHHHHHHHHhCCceEEEECCCCEEEEEEEeCH-HHHHHHHHHHHhCCCCcEEEEE
Confidence            35778666 8999999999999999999998777676899999964 3455555444334455666544

6.1.7 from EC) is an enzyme of approximately 98 amino acid residues that specifically catalyses the hydrolysis of the carboxyl-phosphate bond of acylphosphates [], its substrates including 1,3-diphosphoglycerate and carbamyl phosphate []. The enzyme has a mainly beta-sheet structure with 2 short alpha-helical segments. It is distributed in a tissue-specific manner in a wide variety of species, although its physiological role is as yet unknown []: it may, however, play a part in the regulation of the glycolytic pathway and pyrimidine biosynthesis []. There are two known isozymes. One seems to be specific to muscular tissues, the other, called 'organ-common type', is found in many different tissues. While bacterial and archebacterial hypothetical proteins that are highly similar to that enzyme and that probably possess the same activity. These proteins include: Escherichia coli putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (gene yccX). Bacillus subtilis putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (gene yflL). Archaeoglobus fulgidus putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (O29440 from SWISSPROT). An acylphosphatase-like domain is also found in some prokaryotic hydrogenase maturation HypF carbamoyltransferases [, ].; PDB: 1APS_A 1GXT_A 1GXU_A 2HLT_A 2FHM_A 2HLU_A 3BR8_A 1ULR_A 3TRG_A 2BJD_A ....

>PRK14432 acylphosphatase; Provisional

Probab=88.33  E-value=2.4  Score=31.36  Aligned_cols=68  Identities=13%  Similarity=0.006  Sum_probs=49.2

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEc-CCchHHHHHHHHhhCCCCCCCcEEEcc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQ-GDISYDIVEFITDTWPDVPETAIFFIE  180 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQ-GD~~~~v~~~L~~~~~~ip~~~I~~~~  180 (188)
                      -+|+|.-. |+-.......++.+++-.|.|...+.|.-+|++| ||- +.|.+|+.....+=|...|+-++
T Consensus         6 ~~v~G~VQ-GVGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~~G~~-~~v~~f~~~l~~gp~~a~V~~v~   74 (93)
T PRK14432          6 YFISGKVQ-GVGFRFFTEQIANNMKLKGFVKNLNDGRVEIVAFFNTK-EQMKKFEKLLKNGNKYSNIENIE   74 (93)
T ss_pred             EEEEEeec-CeeehHHHHHHHHHhCCEEEEEECCCCCEEEEEEECCH-HHHHHHHHHHHhCCCccEEEEEE
Confidence            35667666 7888899999999999999998777777899998 985 55666665544452344454443

>PRK14450 acylphosphatase; Provisional

Probab=88.30  E-value=2.8  Score=30.62  Aligned_cols=66  Identities=15%  Similarity=0.265  Sum_probs=47.5

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCC-ceEEEcCC--chHHHHHHHHhhCCCCCCCcEEEcc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEK-EQIDVQGD--ISYDIVEFITDTWPDVPETAIFFIE  180 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~-~eI~iQGD--~~~~v~~~L~~~~~~ip~~~I~~~~  180 (188)
                      -+|+|.-. |+-...++..++.+++-.|.|...+.|. -+|.+||+  ..+...++|. .  +=|...|+-++
T Consensus         6 ~~v~G~VQ-GVGFR~~v~~~A~~~~l~G~V~N~~dG~~Vei~~~G~~~~v~~f~~~l~-~--gp~~a~V~~v~   74 (91)
T PRK14450          6 AIVKGKVQ-GVYFRDFTRTQATRLGLCGYAKNLANGNEVEVVAEGDKDSLLEFLDLLR-S--GPPRAEVKEVE   74 (91)
T ss_pred             EEEEEEec-CcCcHHHHHHHHHHcCCEEEEEECCCCCEEEEEEEeCHHHHHHHHHHHh-h--CCCCcEEEEEE
Confidence            35667666 7888999999999999999997766664 68999998  5555555553 3  43445555443

>PRK14439 acylphosphatase; Provisional

Probab=88.00  E-value=2.2  Score=35.08  Aligned_cols=69  Identities=13%  Similarity=0.051  Sum_probs=49.6

Q ss_pred             EEEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCC-CCcEEEcc
Q 029752          110 ITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVP-ETAIFFIE  180 (188)
Q Consensus       110 VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip-~~~I~~~~  180 (188)
                      --.|+|.-. |+-...+...++.+++-.|.|...+.|.-+|++||+-.. |.+|+.....+-| ...|+-++
T Consensus        78 ~i~VsGrVQ-GVGFR~fv~~~A~qlGLtGwVrNl~DGsVEI~aQG~ee~-Ie~Fi~~L~~~gPp~A~Ve~I~  147 (163)
T PRK14439         78 IAWVYGRVQ-GVGFRYTTQYEAKKLGLTGYAKNLDDGSVEVVACGEEGQ-VEKLMQWLKSGGPRSARVERVL  147 (163)
T ss_pred             EEEEEEeeC-CcCchHHHHHHHHHhCCEEEEEECCCCCEEEEEEcCHHH-HHHHHHHHhhCCCCCeEEEEEE
Confidence            445678777 888899999999999999999777777789999998643 5555544432223 44455443

>PRK14448 acylphosphatase; Provisional

Probab=87.97  E-value=2.8  Score=30.67  Aligned_cols=67  Identities=16%  Similarity=0.104  Sum_probs=48.2

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~  179 (188)
                      -+|+|.-. |+-.......++.+++-.|.|...+.+.-+|.+||+- +.|.+|+.....+=|...|.-+
T Consensus         6 ~~v~G~VQ-GVGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~G~~-~~v~~f~~~l~~gp~~a~V~~v   72 (90)
T PRK14448          6 FIVYGHVQ-GVGFRYFTWQEATKIGIKGYVKNRPDGSVEVVAVGSD-AQIAAFRDWLQHGPPTAVVCNV   72 (90)
T ss_pred             EEEEEeec-CcchHHHHHHHHHHhCCEEEEEECCCCCEEEEEEeCH-HHHHHHHHHHHhCCCceEEEEE
Confidence            45777776 8888999999999999999998777777899999986 3355555444323233444433

>TIGR02174 CXXU_selWTH selT/selW/selH selenoprotein domain

Probab=85.42  E-value=0.75  Score=32.29  Aligned_cols=29  Identities=34%  Similarity=0.714  Sum_probs=21.9

Q ss_pred             eeEEEcCCCCCCccccccCCChhhHHHHHHhhCCCC
Q 029752            8 VRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDL   43 (188)
Q Consensus         8 ~~V~YC~vC~~P~EyCEf~~~~~kCk~wl~~~~p~l   43 (188)
                      ++|.||..|+       |.+-+..-.+-|...+|+.
T Consensus         1 V~IeyC~~C~-------y~~Ra~~l~q~L~~~Fp~~   29 (72)
T TIGR02174         1 VEIEYCGSCG-------YKPRAAWLKQELLEEFPDL   29 (72)
T ss_pred             CEEEECCCCC-------ChHHHHHHHHHHHHHCCCC
Confidence            5799999999       6666666667777777764

This model represents a domain found in both bacteria and animals, including animal proteins SelT, SelW, and SelH, all of which are selenoproteins. In a CXXC motif near the N-terminus of the domain, selenocysteine may replace the second Cys. Proteins with this domain may include an insert of about 70 amino acids. This model is broader than the current SelW model pfam05169 in Pfam.

>PRK14424 acylphosphatase; Provisional

Probab=85.30  E-value=4.8  Score=29.87  Aligned_cols=57  Identities=16%  Similarity=0.147  Sum_probs=44.3

Q ss_pred             EEEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhC
Q 029752          110 ITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW  168 (188)
Q Consensus       110 VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~  168 (188)
                      --+|+|.-. |+-.......++.+++-.|.|...+.|.-+|.+||+-.. |.+|+....
T Consensus        10 ~~~v~G~VQ-GVGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~-v~~f~~~l~   66 (94)
T PRK14424         10 YVRVRGVVQ-GVGFRHATVREAHALGLRGWVANLEDGTVEAMIQGPAAQ-IDRMLAWLR   66 (94)
T ss_pred             EEEEEEeec-CCchHHHHHHHHHHcCCeEEEEECCCCCEEEEEEECHHH-HHHHHHHHH
Confidence            445677766 788899999999999999999877767789999998643 555555443

>PRK14430 acylphosphatase; Provisional

Probab=84.25  E-value=4.9  Score=29.61  Aligned_cols=67  Identities=12%  Similarity=0.125  Sum_probs=45.5

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~  179 (188)
                      -+|+|.=. |+-+.-+...++.+++-.|.|...+.+.-+|.+||+- +.|.+|+.....+=|...|+-+
T Consensus         8 i~v~G~VQ-GVGFR~~~~~~A~~lgl~G~VrN~~dGsVei~~qG~~-~~i~~f~~~l~~gp~~a~V~~v   74 (92)
T PRK14430          8 LVAHGRVQ-GVGYRAACADAADDLGLGGWVRNRADGTVEVMASGTV-RQLEALRAWMEAGPPAAQVTKV   74 (92)
T ss_pred             EEEEEeec-ceeeHHHHHHHHHHhCCEEEEEECCCCcEEEEEEcCH-HHHHHHHHHHHhCCCceEEEEE
Confidence            34566665 7777889999999999999997777777899999974 4444444333213344455444

>PRK14431 acylphosphatase; Provisional

Probab=82.00  E-value=6.4  Score=28.82  Aligned_cols=65  Identities=20%  Similarity=0.232  Sum_probs=46.3

Q ss_pred             EEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCC-CCCcEEEc
Q 029752          112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDV-PETAIFFI  179 (188)
Q Consensus       112 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~i-p~~~I~~~  179 (188)
                      .|+|.=. |+-..-+...++++++-.|.|...+. +-+|.+||+- +.|.+|+.....|- |...|+-+
T Consensus         7 ~v~G~VQ-GVGFR~~~~~~A~~~gl~G~V~N~~d-gVei~~qG~~-~~l~~f~~~l~~g~p~~a~V~~v   72 (89)
T PRK14431          7 QVFGRVQ-GVGFRYFTQRIAMNYNIVGTVQNVDD-YVEIYAQGDD-ADLERFIQGVIEGASPASNVTSY   72 (89)
T ss_pred             EEEEecC-CeeEhHHHHHHHhhcCCEEEEEECCC-cEEEEEEcCH-HHHHHHHHHHhcCCCCcEEEEEE
Confidence            4577766 78889999999999999999977655 4899999975 23555554443345 35555544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	188
2ogh_A	108	Eukaryotic translation initiation factor EIF-1; al	2e-19
2if1_A	126	EIF1, SUI1; translation initiation factor; NMR {Ho	5e-19
2xzm_F	101	EIF1; ribosome, translation; 3.93A {Tetrahymena th	4e-17
1d1r_A	116	Hypothetical 11.4 KD protein YCIH in PYRF-OSMB int	6e-10

>2ogh_A Eukaryotic translation initiation factor EIF-1; alpha-beta protein; NMR {Saccharomyces cerevisiae} Length = 108

 Score = 78.0 bits (192), Expect = 2e-19
 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 1/82 (1%)

Query: 87  GKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTE 146
           G  +      + I    RN RK +TTV+G+      L    K L K FA   ++VK P  
Sbjct: 16  GDDETATSNYIHIRIQQRNGRKTLTTVQGVPE-EYDLKRILKVLKKDFACNGNIVKDPEM 74

Query: 147 KEQIDVQGDISYDIVEFITDTW 168
            E I +QGD    + EF+    
Sbjct: 75  GEIIQLQGDQRAKVCEFMISQL 96

>2if1_A EIF1, SUI1; translation initiation factor; NMR {Homo sapiens} SCOP: d.64.1.1 Length = 126

 Score = 77.7 bits (191), Expect = 5e-19
 Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 3/103 (2%)

Query: 65  STGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLS 124
            + I +  S  P A+  K      +    +  + I    RN RK +TTV+G+        
Sbjct: 14  MSAIQNLHSFDPFADASK--GDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIA-DDYDKK 70

Query: 125 DASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDT 167
              K   KKFA   +V++ P   E I +QGD   +I +F+ + 
Sbjct: 71  KLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEI 113

>2xzm_F EIF1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_F Length = 101

 Score = 72.2 bits (177), Expect = 4e-17
 Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 1/83 (1%)

Query: 92  KDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQID 151
             +  + I    R  RKC TTV+G+           K   K  +  A++V+    K+ I 
Sbjct: 14  DFQTHIHIRVEQRRGRKCFTTVEGIPP-EFDYEKIMKYWKKWLSCNATIVEEDEGKKVIK 72

Query: 152 VQGDISYDIVEFITDTWPDVPET 174
           + GD    I +F+++      + 
Sbjct: 73  LNGDHRNQIQQFLSEEGIAAVDN 95

>1d1r_A Hypothetical 11.4 KD protein YCIH in PYRF-OSMB intergenic region; alpha-beta plait, open-faced beta sandwich, ferredoxin-like fold; NMR {Escherichia coli} SCOP: d.64.1.1 Length = 116

 Score = 53.7 bits (129), Expect = 6e-10
 Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 5/82 (6%)

Query: 85  PGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGP 144
                 K D    +  +    K K +  + G++L   +L+  + +L KK   G +V  G 
Sbjct: 22  AAPVRPKGDGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDG- 80

Query: 145 TEKEQIDVQGDISYDIVEFITD 166
                I++QGD    +   +  
Sbjct: 81  ----VIEIQGDKRDLLKSLLEA 98

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	188
2xzm_F	101	EIF1; ribosome, translation; 3.93A {Tetrahymena th	99.94
2ogh_A	108	Eukaryotic translation initiation factor EIF-1; al	99.93
2if1_A	126	EIF1, SUI1; translation initiation factor; NMR {Ho	99.9
1d1r_A	116	Hypothetical 11.4 KD protein YCIH in PYRF-OSMB int	99.87
1gxu_A	91	Hydrogenase maturation protein HYPF; phosphatase,	92.43
2fhm_A	91	Probable acylphosphatase; hydrolase; NMR {Bacillus	92.1
2d74_B	148	Translation initiation factor 2 beta subunit; prot	91.14
3trg_A	98	Acylphosphatase; fatty acid and phospholipid metab	90.69
1nee_A	138	EIF-2-beta, probable translation initiation factor	90.59
2lxf_A	121	Uncharacterized protein; beaver fever, giardiasis,	90.44
1urr_A	102	CG18505 protein; acylphosphatase, enzyme; 1.5A {Dr	89.96
2vh7_A	99	Acylphosphatase-1; hydrolase, acetylation; 1.45A {	89.44
1ulr_A	88	Putative acylphosphatase; hydrolase, structural ge	89.19
2bjd_A	101	Acylphosphatase; hyperthermophIle, hydrolase; 1.27	88.92
1w2i_A	91	Acylphosphatase; hydrolase, thermophilic, stabilit	88.46
2e9h_A	157	EIF-5, eukaryotic translation initiation factor 5;	87.72
1k8b_A	52	EIF-2-beta, probable translation initiation factor	87.14
2g2k_A	170	EIF-5, eukaryotic translation initiation factor 5;	84.39
2gv1_A	92	Probable acylphosphatase; globular alpha-helix/bet	83.45
1aps_A	98	Acylphosphatase; hydrolase(acting on acid anhydrid	80.86

>2xzm_F EIF1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_F

Probab=99.94  E-value=2.3e-26  Score=172.75  Aligned_cols=84  Identities=24%  Similarity=0.352  Sum_probs=79.6

Q ss_pred             CCcEEEEEEeecCCeeEEEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCC-C
Q 029752           94 KKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDV-P  172 (188)
Q Consensus        94 ~~~I~I~~~~R~grK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~i-p  172 (188)
                      .+.|+|++++|+|||+||+|+||+ |++||++|||.|+++|||||||++++.++++|+|||||++.|.+||.++  |+ |
T Consensus        16 ~~~v~I~~~~R~g~K~VT~V~Gl~-~~~dlk~laK~lKkk~acggsV~~~~~~g~~I~iQGD~r~~v~~~L~~~--G~~~   92 (101)
T 2xzm_F           16 QTHIHIRVEQRRGRKCFTTVEGIP-PEFDYEKIMKYWKKWLSCNATIVEEDEGKKVIKLNGDHRNQIQQFLSEE--GIAA   92 (101)
T ss_dssp             SCCEEEEEEEEETTEEEEEEECCC-TTSCTHHHHHHHHHHHTSCCCEEECSTTCEEEEEESCCHHHHHHHHHHH--SSSC
T ss_pred             CCeEEEEEEeccCCccEEEEecCC-CchhHHHHHHHHHHHhcCCeEEecCCCCceEEEEeCcHHHHHHHHHHHc--CCCC
Confidence            678999999999999999999999 9999999999999999999999998888889999999999999999998  66 9


Q ss_pred             CCcEEEcc
Q 029752          173 ETAIFFIE  180 (188)
Q Consensus       173 ~~~I~~~~  180 (188)
                      +++|++.+
T Consensus        93 ~~~I~vhg  100 (101)
T 2xzm_F           93 VDNITIHG  100 (101)
T ss_dssp             TTTEEECC
T ss_pred             HHHEEEcC
Confidence            99999864

>2ogh_A Eukaryotic translation initiation factor EIF-1; alpha-beta protein; NMR {Saccharomyces cerevisiae}

Probab=99.93  E-value=1e-25  Score=170.94  Aligned_cols=88  Identities=30%  Similarity=0.376  Sum_probs=82.1

Q ss_pred             CCCCCcEEEEEEeecCCeeEEEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCC
Q 029752           91 KKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPD  170 (188)
Q Consensus        91 k~~~~~I~I~~~~R~grK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~  170 (188)
                      ++..+.|+|++++|+|||+||+|+||+. ++||++|||.|+++|||||||+++++++++|+|||||++.|.+||.++. .
T Consensus        20 ~~~~~~V~Ir~~~R~g~K~VT~V~Gl~~-~~dlk~lak~lKkk~acggsV~~~~~~g~~I~iQGD~r~~v~~~L~~~g-~   97 (108)
T 2ogh_A           20 TATSNYIHIRIQQRNGRKTLTTVQGVPE-EYDLKRILKVLKKDFACNGNIVKDPEMGEIIQLQGDQRAKVCEFMISQL-G   97 (108)
T ss_dssp             CCCSCSEEEEEECCSSSCCEEEEECCCT-TSCHHHHHHHHHHHHCCCEEEECCTTSSCEEEEESSCHHHHHHHHHHHH-T
T ss_pred             cCCCCeEEEEEEEccCCceEEEEeCCCc-chhHHHHHHHHHHHhcCceEEecCCCCceEEEEcCCHHHHHHHHHHHcC-C
Confidence            4678899999999999999999999997 9999999999999999999999988888899999999999999999995 5


Q ss_pred             CCCCcEEEcc
Q 029752          171 VPETAIFFIE  180 (188)
Q Consensus       171 ip~~~I~~~~  180 (188)
                      +|+++|++.+
T Consensus        98 ~~~~~I~vhg  107 (108)
T 2ogh_A           98 LQKKNIKIHG  107 (108)
T ss_dssp             SCCSCEEECC
T ss_pred             CCHHHEEEcC
Confidence            7999999865

>2if1_A EIF1, SUI1; translation initiation factor; NMR {Homo sapiens} SCOP: d.64.1.1

Probab=99.90  E-value=1.2e-24  Score=169.05  Aligned_cols=86  Identities=27%  Similarity=0.378  Sum_probs=80.3

Q ss_pred             CCCCcEEEEEEeecCCeeEEEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCC
Q 029752           92 KDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDV  171 (188)
Q Consensus        92 ~~~~~I~I~~~~R~grK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~i  171 (188)
                      +..+.|+|++++|+|||+||+|+||+. ++||++|||.|+++|||||||++++.++++|+||||+++.|.+||.++  |+
T Consensus        39 g~~~~V~Ir~~~R~grK~VT~V~GL~~-~~dlk~laK~LKkk~acgGtVk~~~e~g~~I~IQGD~r~~I~~~L~~~--G~  115 (126)
T 2if1_A           39 GTEDYIHIRIQQRNGRKTLTTVQGIAD-DYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEI--GL  115 (126)
T ss_dssp             SCTTCEECCCCCSSSSCCBCEEBSCCT-TSCHHHHHTTHHHHTCCCEEEECCTTTSSEEEESBCCHHHHHHHHHHH--TS
T ss_pred             CCCCeEEEEEEeecCCccEEEEeCCCC-chhHHHHHHHHHHHhcCCeEEecCCCCccEEEEcCCHHHHHHHHHHHc--CC
Confidence            668899999999999999999999998 999999999999999999999988877889999999999999999998  66


Q ss_pred             -CCCcEEEcc
Q 029752          172 -PETAIFFIE  180 (188)
Q Consensus       172 -p~~~I~~~~  180 (188)
                       ++++|++-+
T Consensus       116 ~~~~~I~vhg  125 (126)
T 2if1_A          116 AKDDQLKVHG  125 (126)
T ss_dssp             SCTTTEECCC
T ss_pred             CChhhEEeeC
Confidence             799998753

>1d1r_A Hypothetical 11.4 KD protein YCIH in PYRF-OSMB intergenic region; alpha-beta plait, open-faced beta sandwich, ferredoxin-like fold; NMR {Escherichia coli} SCOP: d.64.1.1

Probab=99.87  E-value=6.9e-23  Score=157.16  Aligned_cols=80  Identities=21%  Similarity=0.285  Sum_probs=72.8

Q ss_pred             CCCcEEEEEEeecCC--eeEEEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCC
Q 029752           93 DKKEVVIEKVVRNKR--KCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPD  170 (188)
Q Consensus        93 ~~~~I~I~~~~R~gr--K~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~  170 (188)
                      ..+.|+|+++ |+||  |.||+|+||+.|++||++|||.|+++|||||||     .+++|+||||+++.|.+||.++  |
T Consensus        29 ~~~~V~I~~e-r~gR~GK~VT~V~Gl~~~~~dlk~laK~LKkk~acgGtV-----k~~~IeiQGD~r~~i~~~L~~~--G  100 (116)
T 1d1r_A           29 GDGVVRIQRQ-TSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAV-----KDGVIEIQGDKRDLLKSLLEAK--G  100 (116)
T ss_dssp             CCCEEEEEEC-CCSSSSCCCEEEECCCSCHHHHHHHHHHHTTSSSSCCBC-----CSSCEEECSCCHHHHHHHHHHH--T
T ss_pred             CCCeEEEEEE-eCCCCCCeEEEEeCCcCchhhHHHHHHHHHHHhcCCcEE-----cCCEEEEeCcHHHHHHHHHHHc--C
Confidence            3678999998 7777  999999999999999999999999999999999     4589999999999999999998  7


Q ss_pred             CCCCcEEEcc
Q 029752          171 VPETAIFFIE  180 (188)
Q Consensus       171 ip~~~I~~~~  180 (188)
                      ++.++|..++
T Consensus       101 ~~vk~i~~~~  110 (116)
T 1d1r_A          101 MKVKLAGGLE  110 (116)
T ss_dssp             CEECCCCCCC
T ss_pred             CCcceecccc
Confidence            8888877664

>1gxu_A Hydrogenase maturation protein HYPF; phosphatase, acylphosphatases, hydrogenase maturations, fibril formation, zinc-finger, complete proteome; 1.27A {Escherichia coli} SCOP: d.58.10.1 PDB: 1gxt_A

Probab=92.43  E-value=0.72  Score=32.83  Aligned_cols=63  Identities=13%  Similarity=0.117  Sum_probs=50.2

Q ss_pred             EEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEc
Q 029752          112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       112 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~  179 (188)
                      +|+|.-. |+-...+...++.+++-.|.|...+.+ -+|++||+- +.+.++|...  +=|...|+-+
T Consensus        12 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~VrN~~dG-Vei~~eG~~-~~f~~~l~~~--~P~~A~V~~v   74 (91)
T 1gxu_A           12 RIRGKVQ-GVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDP-EVFLVQLYQH--CPPLARIDSV   74 (91)
T ss_dssp             EEEEECS-SSSHHHHHHHHHHHHTCCEEEEECSSS-EEEEESSCC-HHHHHHHHHT--CCTTCEEEEE
T ss_pred             EEEEeeC-CcCHHHHHHHHHHHcCCeEEEEECCCc-EEEEEEECH-HHHHHHHhhC--CCCCEEEEEE
Confidence            4788776 899999999999999999999777666 899999999 8888888765  2244555443

>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A

Probab=92.10  E-value=0.52  Score=33.40  Aligned_cols=67  Identities=16%  Similarity=0.114  Sum_probs=49.7

Q ss_pred             EEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEcc
Q 029752          112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIE  180 (188)
Q Consensus       112 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~~  180 (188)
                      +|+|.-. |+-...+...++.+++-.|.|...+.+.-+|++||+-. .|.+||.....+-|...|+-++
T Consensus         7 ~v~G~VQ-GVGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~eG~~~-~i~~f~~~l~~~~p~a~V~~v~   73 (91)
T 2fhm_A            7 IVDGRVQ-GVGFRYFVQMEADKRKLAGWVKNRDDGRVEILAEGPEN-ALQSFVEAVKNGSPFSKVTDIS   73 (91)
T ss_dssp             EEEEECC-SSCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEECHH-HHHHHHHHHHTTCSSSEEEEEE
T ss_pred             EEEEeEC-CcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHH-HHHHHHHHHHhCCCccEEEEEE
Confidence            4788776 89999999999999999999987777778999999853 3444444333344556666553

>2d74_B Translation initiation factor 2 beta subunit; protein complex; 2.80A {Pyrococcus furiosus} PDB: 2dcu_B*

Probab=91.14  E-value=0.19  Score=39.43  Aligned_cols=65  Identities=12%  Similarity=0.131  Sum_probs=47.9

Q ss_pred             CCcEEEEEEeecCCeeEEEEeccCCC----CCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhC
Q 029752           94 KKEVVIEKVVRNKRKCITTVKGLELF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW  168 (188)
Q Consensus        94 ~~~I~I~~~~R~grK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~  168 (188)
                      .+++.+.++   |+|  |+|.+|...    .=++.-+.|.|..-+|+.|++.     ++..+|+|.+.....+-++..|
T Consensus        32 mP~~~v~~e---GkK--Tvi~Nf~dIa~~L~R~p~hv~ky~~~ELGt~g~id-----~~rlii~G~~~~~~i~~~L~~y  100 (148)
T 2d74_B           32 VPGALVTIE---GNK--TIIENFKDIADALNRDPQHLLKFLLREIATAGTLE-----GRRVVLQGRFTPYLIANKLKKY  100 (148)
T ss_dssp             CCCCCEEEE---TTE--EEESCHHHHHHHHTCCSHHHHHHHHHHSCCCEEEE-----TTEEEESSCCCHHHHHHHHHHH
T ss_pred             cCCCeEEEe---cCe--EEEEcHHHHHHHHCCCHHHHHHHHHHHhCCceeec-----CCEEEEEeeeCHHHHHHHHHHH
Confidence            445555544   444  999998753    3478899999999999999992     6799999998766655554443

>3trg_A Acylphosphatase; fatty acid and phospholipid metabolism, hydrolase; 1.60A {Coxiella burnetii}

Probab=90.69  E-value=1.2  Score=32.21  Aligned_cols=66  Identities=18%  Similarity=0.234  Sum_probs=49.2

Q ss_pred             EEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEc
Q 029752          112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       112 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~  179 (188)
                      +|+|.-. |+-...+...++.+++-.|.|...+.+.-+|++||+ .+.|..|+.....+=|...|+-+
T Consensus        17 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~VrN~~dG~Vei~~eG~-~~~l~~f~~~l~~gPp~A~V~~v   82 (98)
T 3trg_A           17 TVSGKVQ-GVFFRESVRKKAEELQLTGWVKNLSHGDVELVACGE-RDSIMILTEWLWEGPPQAAVSNV   82 (98)
T ss_dssp             EEEEECS-SSCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEE-HHHHHHHHHHTTTCSTTCEEEEE
T ss_pred             EEEEeEC-CCCccHHHHHHHHHcCCeEEEEECCCCEEEEEEEEC-HHHHHHHHHHHHhCCCCcEEEEE
Confidence            5778776 899999999999999999999777666689999998 45566666554433344455443

>1nee_A EIF-2-beta, probable translation initiation factor 2 beta subunit; two domain protein, mixed alpha-beta structure; NMR {Methanothermobacterthermautotrophicus} SCOP: d.241.1.1 g.59.1.1

Probab=90.59  E-value=0.11  Score=40.44  Aligned_cols=65  Identities=9%  Similarity=0.066  Sum_probs=47.3

Q ss_pred             CCcEEEEEEeecCCeeEEEEeccCCC----CCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhC
Q 029752           94 KKEVVIEKVVRNKRKCITTVKGLELF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW  168 (188)
Q Consensus        94 ~~~I~I~~~~R~grK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~  168 (188)
                      .+++.+.++   |+|  |+|.+|...    .=++.-+.|.|..-+|+.|++    . ++..+|+|.+.....+-++..|
T Consensus        30 mp~~~v~~e---G~k--Tvi~Nf~dIa~~L~R~p~hv~ky~~~ELGt~g~i----d-~~rlii~G~~~~~~i~~~L~~y   98 (138)
T 1nee_A           30 VPKAYSVIQ---GNR--TFIQNFREVADALNRDPQHLLKFLLRELGTAGNL----E-GGRAILQGKFTHFLINERIEDY   98 (138)
T ss_dssp             CSCCCCCEE---TTE--EEESCHHHHHHHHCSSHHHHHHHHHHHCCSCCCC----B-TTTEEEESSCSSSHHHHHHHHH
T ss_pred             cCCCeEEEE---CCc--EEEEcHHHHHHHHCCCHHHHHHHHHHHhCCceee----c-CCEEEEEeeeCHHHHHHHHHHH
Confidence            344444443   556  999998863    347899999999999999999    2 6789999997665555444433

>2lxf_A Uncharacterized protein; beaver fever, giardiasis, seattle structural genomics center infectious disease, ssgcid, structural genomics; NMR {Giardia lamblia}

Probab=90.44  E-value=0.57  Score=35.41  Aligned_cols=66  Identities=18%  Similarity=0.157  Sum_probs=47.7

Q ss_pred             EeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEcc
Q 029752          113 VKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIE  180 (188)
Q Consensus       113 V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~~  180 (188)
                      |+|.-. |+-...+...++.+++-.|.|...+.|.-+|++||+- +.|.+||.....+=|...|+-++
T Consensus        40 V~G~VQ-GVGFR~~v~~~A~~lgL~G~VrN~~dG~Vei~~eG~~-~~v~~f~~~l~~gPp~A~V~~v~  105 (121)
T 2lxf_A           40 VTGKVQ-GVFFRKYTKKEADALSLVGYVTNNEDGSVSGVVQGPK-EQVDAFVKYLHKGSPKSVVKKVS  105 (121)
T ss_dssp             EEECTT-CCCCHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEEH-HHHHHHHHHHHHCCTTCCEEEEE
T ss_pred             EEEeeC-CcCchHHHHHHHHHcCCEEEEEECCCCCEEEEEEECH-HHHHHHHHHHHhCCCCCEEEEEE
Confidence            778776 8888999999999999999998777777899999973 44444443322244555565543

>1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} SCOP: d.58.10.1

Probab=89.96  E-value=1.3  Score=32.05  Aligned_cols=65  Identities=8%  Similarity=0.172  Sum_probs=48.6

Q ss_pred             EEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCc--hHHHHHHHHhhCCCCCCCcEEEc
Q 029752          112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI--SYDIVEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       112 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~--~~~v~~~L~~~~~~ip~~~I~~~  179 (188)
                      +|+|.-. |+-...+...++.+++-.|.|...+.+.-+|++||+-  .+...++|...  +=|...|+-+
T Consensus        16 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~l~~f~~~l~~~--gP~~a~V~~v   82 (102)
T 1urr_A           16 EIFGRVQ-GVFFRKHTSHEAKRLGVRGWCMNTRDGTVKGQLEAPMMNLMEMKHWLENN--RIPNAKVSKA   82 (102)
T ss_dssp             EEEEECS-SSSHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEECHHHHHHHHHHHHHC--CSTTCEEEEE
T ss_pred             EEEEeEC-CcChhHHHHHHHHHhCCcEEEEECCCCCEEEEEEcCHHHHHHHHHHHHhc--CCCccEEEEE
Confidence            4888776 8999999999999999999998777676899999985  34455555433  3344555544

>2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2w4c_A 2w4p_A 2k7k_A 2k7j_A 2acy_A

Probab=89.44  E-value=1.4  Score=31.58  Aligned_cols=65  Identities=22%  Similarity=0.211  Sum_probs=48.3

Q ss_pred             EEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCc--hHHHHHHHHhhCCCCCCCcEEEc
Q 029752          112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI--SYDIVEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       112 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~--~~~v~~~L~~~~~~ip~~~I~~~  179 (188)
                      +|+|.-. |+-...+...++.+++-.|.|...+.+.-+|++||+-  .+.+.++|...  +=|...|+-+
T Consensus        13 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~v~~f~~~l~~~--~p~~a~V~~v   79 (99)
T 2vh7_A           13 EIFGKVQ-GVFFRKHTQAEGKKLGLVGWVQNTDRGTVQGQLQGPISKVRHMQEWLETR--GSPKSHIDKA   79 (99)
T ss_dssp             EEEEECS-SSCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHHHHT--CSTTCEEEEE
T ss_pred             EEEEeeC-CcChHHHHHHHHHHcCCcEEEEECCCCCEEEEEEcCHHHHHHHHHHHHhc--CCCceEEEEE
Confidence            4788776 8999999999999999999998777666899999985  34455555433  3344555544

>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: d.58.10.1

Probab=89.19  E-value=2.3  Score=29.86  Aligned_cols=64  Identities=13%  Similarity=0.092  Sum_probs=48.6

Q ss_pred             EEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCc--hHHHHHHHHhhCCCCCCCcEEEc
Q 029752          112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI--SYDIVEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       112 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~--~~~v~~~L~~~~~~ip~~~I~~~  179 (188)
                      .|+|.-. |+-...+...++.+++-.|.|...+.+.-+|++||+-  .+...++|. .  +=|...|+-+
T Consensus         7 ~v~G~VQ-GVGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l~-~--gP~~a~V~~v   72 (88)
T 1ulr_A            7 LVKGRVQ-GVGYRAFAQKKALELGLSGYAENLPDGRVEVVAEGPKEALELFLHHLK-Q--GPRLARVEAV   72 (88)
T ss_dssp             EEEEECS-SSSHHHHHHHHHHHTTCEEEEEECTTSCEEEEEESCHHHHHHHHHHHH-H--CSTTCEEEEE
T ss_pred             EEEEeEC-CcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHHH-h--CCCCcEEEEE
Confidence            5788766 8999999999999999999998777676899999985  455555555 3  3344555544

>2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A

Probab=88.92  E-value=1.7  Score=31.47  Aligned_cols=66  Identities=12%  Similarity=0.139  Sum_probs=48.8

Q ss_pred             EEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEc
Q 029752          112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       112 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~  179 (188)
                      +|+|.-. |+-...++..++.+++-.|.|...+.|.-+|++||+.. .|.+||.....+=|...|+-+
T Consensus        19 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~-~i~~f~~~l~~gP~~A~V~~v   84 (101)
T 2bjd_A           19 RVYGLVQ-GVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEE-ALSKLLERIKQGPPAAEVEKV   84 (101)
T ss_dssp             EEEEECS-SSSHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHH-HHHHHHHHHTTCSTTCEEEEE
T ss_pred             EEEEeEC-CcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHH-HHHHHHHHHHhCCCccEEEEE
Confidence            4888776 89999999999999999999987776768999999853 355555544435233555443

>1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} SCOP: d.58.10.1 PDB: 1v3z_A 2w4d_A

Probab=88.46  E-value=1.9  Score=30.49  Aligned_cols=66  Identities=15%  Similarity=0.158  Sum_probs=48.4

Q ss_pred             EEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEc
Q 029752          112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       112 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~  179 (188)
                      .|+|.-. |+-...+...++.+++-.|.|...+.+.-+|++||+-.. |.+|+.....+=|...|+-+
T Consensus         9 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~~G~~~~-v~~f~~~l~~gP~~a~V~~v   74 (91)
T 1w2i_A            9 KIYGRVQ-GVGFRWSMQREARKLGVNGWVRNLPDGSVEAVLEGDEER-VEALIGWAHQGPPLARVTRV   74 (91)
T ss_dssp             EEEEECS-SSSHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEEHHH-HHHHHHHTTTCSTTCEEEEE
T ss_pred             EEEEEEC-CcCHHHHHHHHHHHcCCeEEEEECCCCCEEEEEEeCHHH-HHHHHHHHHhCCCCcEEEEE
Confidence            4788776 899999999999999999999877777789999998532 55555443323344555544

>2e9h_A EIF-5, eukaryotic translation initiation factor 5; zinc binding, C4 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=87.72  E-value=0.32  Score=38.55  Aligned_cols=71  Identities=8%  Similarity=0.080  Sum_probs=50.8

Q ss_pred             CCcEEEEEEeecCCeeEEEEeccCCC----CCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhC
Q 029752           94 KKEVVIEKVVRNKRKCITTVKGLELF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW  168 (188)
Q Consensus        94 ~~~I~I~~~~R~grK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~  168 (188)
                      .+++.+.++.++.. .-|+|.+|...    .=++.-+.|.|...+|+.|++..   +++..+|+|.+.....+-++..|
T Consensus        25 mP~~~v~~eG~gnG-~KTvi~Nf~dIak~L~R~p~hv~ky~~~ELGt~g~id~---~~~rlii~G~~~~~~i~~~L~~y   99 (157)
T 2e9h_A           25 MPRLIAKVEGKGNG-IKTVIVNMVDVAKALNRPPTYPTKYFGCELGAQTQFDV---KNDRYIVNGSHEANKLQDMLDGF   99 (157)
T ss_dssp             EECCCEEECSSSSS-CEEEETTHHHHHHHTTSCTHHHHHHHHHHHTCCEEEET---TTTEEEEEBCCCHHHHHHHHHHH
T ss_pred             cCCCeEEEeccCCc-cEEEEEcHHHHHHHHCCCHHHHHHHHHHHhCCceeecC---CCCEEEEEeeeCHHHHHHHHHHH
Confidence            45566677776332 45788888753    44788999999999999999931   46899999998766555444433

>1k8b_A EIF-2-beta, probable translation initiation factor 2 beta subunit; N-terminal domain, AIF2 subunit beta; NMR {Methanocaldococcus jannaschii} SCOP: d.241.1.1

Probab=87.14  E-value=0.46  Score=30.89  Aligned_cols=46  Identities=11%  Similarity=0.082  Sum_probs=37.0

Q ss_pred             eecCCeeEEEEeccCCC----CCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCC
Q 029752          103 VRNKRKCITTVKGLELF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGD  155 (188)
Q Consensus       103 ~R~grK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD  155 (188)
                      .|-|+|  |+|.++...    .=++.-+.|.|.+.+++.|++.     ++..+|+|.
T Consensus         3 ~~eG~k--Tvi~Nf~~Ia~~L~R~p~hv~ky~~~ELGt~g~id-----~~rlii~G~   52 (52)
T 1k8b_A            3 LIEGNR--TIIRNFRELAKAVNRDEEFFAKYLLKETGSAGNLE-----GGRLILQRR   52 (52)
T ss_dssp             EEETTE--EEECCHHHHHHHHHTCHHHHHHHHHHHHSSEEEEE-----TTEEEEECC
T ss_pred             EEEcCe--EEEECHHHHHHHHCCCHHHHHHHHHHHhCCCeeec-----CCEEEEeCC
Confidence            355777  999998763    3478999999999999999992     578888883

>2g2k_A EIF-5, eukaryotic translation initiation factor 5; EIF125 fold; NMR {Homo sapiens}

Probab=84.39  E-value=0.33  Score=38.92  Aligned_cols=71  Identities=8%  Similarity=0.089  Sum_probs=50.2

Q ss_pred             CCCcEEEEEEeecCCeeEEEEeccCCC----CCcHHHHHHHHhhhcccceeEeeCCCC-CceEEEcCCchHHHHHHHHhh
Q 029752           93 DKKEVVIEKVVRNKRKCITTVKGLELF----GVKLSDASKKLGKKFATGASVVKGPTE-KEQIDVQGDISYDIVEFITDT  167 (188)
Q Consensus        93 ~~~~I~I~~~~R~grK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~-~~eI~iQGD~~~~v~~~L~~~  167 (188)
                      ..+++.+.++.++.+ .-|+|.+|...    .=++.-+.+.|..-+|+.|++    .+ ++..+|+|.+....++-++..
T Consensus        17 kmP~~~v~~EG~gnG-~KTvi~Nf~dIak~L~R~p~hv~kyf~~ELGt~g~i----d~~~~rliinG~~~~~~i~~~L~~   91 (170)
T 2g2k_A           17 KMPRLIAKVEGKGNG-IKTVIVNMVDVAKALNRPPTYPTKYFGCELGAQTQF----DVKNDRYIVNGSHEANKLQDMLDG   91 (170)
T ss_dssp             CCCCCCCEEESCTTT-CEEECSSHHHHHHHHSSCCTTTHHHHHHHTTCCCEE----CTTTCCEEEEBCCCHHHHHHHHHH
T ss_pred             cCCCCeEEEeccCCc-cEEEEEcHHHHHHHhCCCHHHHHHHHHHHhCCceee----cCCCCEEEEEeeeCHHHHHHHHHH
Confidence            356777888888432 34677776643    235667788899999999999    33 678999999877666555544


Q ss_pred             C
Q 029752          168 W  168 (188)
Q Consensus       168 ~  168 (188)
                      |
T Consensus        92 y   92 (170)
T 2g2k_A           92 F   92 (170)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli}

Probab=83.45  E-value=2  Score=30.39  Aligned_cols=66  Identities=9%  Similarity=0.011  Sum_probs=44.9

Q ss_pred             EEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhh-CCCCCCCcEEEc
Q 029752          112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDT-WPDVPETAIFFI  179 (188)
Q Consensus       112 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~-~~~ip~~~I~~~  179 (188)
                      +|+|.-. |+-...+...++.+++-.|.|...+.+.-+|++||+-. .|.+|+... ..+=|...|+-+
T Consensus         9 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~-~i~~f~~~l~~~gP~~a~V~~v   75 (92)
T 2gv1_A            9 WVYGRVQ-GVGFRYTTQYEAKRLGLTGYAKNLDDGSVEVVACGEEG-QVEKLMQWLKSGGPRSARVERV   75 (92)
T ss_dssp             EEEEECT-TTTCCSHHHHHHHHHTCCCEEEECSSSCEEEEECSCHH-HHHHHHHHHHHTSSTTSEEEEE
T ss_pred             EEEEeeC-CcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHH-HHHHHHHHhhccCCCceEEEEE
Confidence            4777665 77778888888899999999977776668999999853 244444332 225234445443

>1aps_A Acylphosphatase; hydrolase(acting on acid anhydrides); NMR {Equus caballus} SCOP: d.58.10.1

Probab=80.86  E-value=1.9  Score=30.90  Aligned_cols=54  Identities=17%  Similarity=0.051  Sum_probs=41.7

Q ss_pred             EEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhh
Q 029752          112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDT  167 (188)
Q Consensus       112 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~  167 (188)
                      +|+|.-. |+-...++..++.+++-.|.|...+.+.-+|++||+-. .|.+||...
T Consensus        12 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~-~l~~f~~~l   65 (98)
T 1aps_A           12 EVFGRVQ-GVCFRMYAEDEARKIGVVGWVKNTSKGTVTGQVQGPEE-KVNSMKSWL   65 (98)
T ss_dssp             EEECTTS-CCCCTTHHHHHHHHHTCEEEEECCTTCEEEEEEEEEHH-HHHHHHHSS
T ss_pred             EEEEEEC-CcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHH-HHHHHHHHH
Confidence            4788766 88888899999999999999876665557999999853 366665443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	188
d2if1a_	126	d.64.1.1 (A:) Eukaryotic translation initiation fa	3e-16
d1d1ra_	83	d.64.1.1 (A:) YciH {Escherichia coli [TaxId: 562]}	2e-10

>d2if1a_ d.64.1.1 (A:) Eukaryotic translation initiation factor eIF-1 (SUI1) {Human (Homo sapiens) [TaxId: 9606]} Length = 126

class: Alpha and beta proteins (a+b)
fold: eIF1-like
superfamily: eIF1-like
family: eIF1-like
domain: Eukaryotic translation initiation factor eIF-1 (SUI1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.2 bits (169), Expect = 3e-16
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 3/99 (3%)

Query: 68  ISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDAS 127
           I +  S  P A+  K         +D   + I++  RN RK +TTV+G+           
Sbjct: 17  IQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQ--RNGRKTLTTVQGIA-DDYDKKKLV 73

Query: 128 KKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITD 166
           K   KKFA   +V++ P   E I +QGD   +I +F+ +
Sbjct: 74  KAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVE 112

>d1d1ra_ d.64.1.1 (A:) YciH {Escherichia coli [TaxId: 562]} Length = 83

class: Alpha and beta proteins (a+b)
fold: eIF1-like
superfamily: eIF1-like
family: eIF1-like
domain: YciH
species: Escherichia coli [TaxId: 562]

 Score = 52.7 bits (127), Expect = 2e-10
 Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 5/61 (8%)

Query: 106 KRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFIT 165
           K K +  + G++L   +L+  + +L KK   G +V  G      I++QGD    +   + 
Sbjct: 16  KGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDG-----VIEIQGDKRDLLKSLLE 70

Query: 166 D 166
            
Sbjct: 71  A 71

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	188
d2if1a_	126	Eukaryotic translation initiation factor eIF-1 (SU	99.91
d1d1ra_	83	YciH {Escherichia coli [TaxId: 562]}	99.82
d1w2ia_	90	Acylphosphatase {Pyrococcus horikoshii [TaxId: 539	94.22
d1neea1	98	Translation initiation factor 2 beta, aIF2beta, N-	93.88
d1ulra_	87	Acylphosphatase {Thermus thermophilus [TaxId: 274]	93.46
d1urra_	97	Acylphosphatase 2 (Cg18505) {Fruit fly (Drosophila	92.61
d1apsa_	98	Acylphosphatase {Horse (Equus caballus) [TaxId: 97	87.69
d2acya_	98	Acylphosphatase {Cow (Bos taurus) [TaxId: 9913]}	86.6

>d2if1a_ d.64.1.1 (A:) Eukaryotic translation initiation factor eIF-1 (SUI1) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: eIF1-like
superfamily: eIF1-like
family: eIF1-like
domain: Eukaryotic translation initiation factor eIF-1 (SUI1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.2e-25  Score=170.45  Aligned_cols=89  Identities=26%  Similarity=0.337  Sum_probs=81.7

Q ss_pred             CCCCCCCcEEEEEEeecCCeeEEEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhC
Q 029752           89 IKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW  168 (188)
Q Consensus        89 ~kk~~~~~I~I~~~~R~grK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~  168 (188)
                      .+++...+|+|++++|+|||+||+|+||+ |++||++||+.|+++|||||||.+++.++++|+||||++++|.+||.+++
T Consensus        36 ~~~~~~~~I~I~~ekR~G~K~VT~I~Gl~-~~~dlk~laK~lKk~~acggSVk~~~~~~~~I~IQGD~r~~v~~~L~~~g  114 (126)
T d2if1a_          36 LPAGTEDYIHIRIQQRNGRKTLTTVQGIA-DDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIG  114 (126)
T ss_dssp             CSCSCTTCEECCCCCSSSSCCBCEEBSCC-TTSCHHHHHTTHHHHTCCCEEEECCTTTSSEEEESBCCHHHHHHHHHHHT
T ss_pred             CCCCCcceEEEEEEecCCCCCeEEEECCC-CcccHHHHHHHHHHhcCCCceEEeCCCCCcEEEEcccHHHHHHHHHHHcC
Confidence            34567789999999999999999999998 79999999999999999999999988888999999999999999999995


Q ss_pred             CCCCCCcEEEc
Q 029752          169 PDVPETAIFFI  179 (188)
Q Consensus       169 ~~ip~~~I~~~  179 (188)
                       .+++++|++-
T Consensus       115 -~~~k~~I~vH  124 (126)
T d2if1a_         115 -LAKDDQLKVH  124 (126)
T ss_dssp             -SSCTTTEECC
T ss_pred             -CCccccEEec
Confidence             6689999874

>d1d1ra_ d.64.1.1 (A:) YciH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: eIF1-like
superfamily: eIF1-like
family: eIF1-like
domain: YciH
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=3.9e-21  Score=137.84  Aligned_cols=74  Identities=22%  Similarity=0.325  Sum_probs=65.2

Q ss_pred             CCcEEEEEEeec-CCeeEEEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCC
Q 029752           94 KKEVVIEKVVRN-KRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVP  172 (188)
Q Consensus        94 ~~~I~I~~~~R~-grK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip  172 (188)
                      ...|+|++++|+ ++|+||+|+||+.|++||++||+.|+++|||||||     .+++|+|||||++.|.+||.++  |++
T Consensus         3 ~~~Vri~~e~kgR~GK~VT~I~Gl~~~~~dlk~l~k~lKk~~gcGgsv-----k~~~I~lQGd~~~~v~~~L~~~--G~~   75 (83)
T d1d1ra_           3 DGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAV-----KDGVIEIQGDKRDLLKSLLEAK--GMK   75 (83)
T ss_dssp             CCEEEEEECCCSSSSCCCEEEECCCSCHHHHHHHHHHHTTSSSSCCBC-----CSSCEEECSCCHHHHHHHHHHH--TCE
T ss_pred             CeEEEEEEEcCCCCCCeEEEEECCcCCHHHHHHHHHHHHHHhcCCEEE-----ECCEEEEeCcHHHHHHHHHHHc--CCc
Confidence            567888887653 33999999999999999999999999999999999     5689999999999999999998  665


Q ss_pred             CC
Q 029752          173 ET  174 (188)
Q Consensus       173 ~~  174 (188)
                      .+
T Consensus        76 ~K   77 (83)
T d1d1ra_          76 VK   77 (83)
T ss_dssp             EC
T ss_pred             ee
Confidence            43

>d1w2ia_ d.58.10.1 (A:) Acylphosphatase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Acylphosphatase/BLUF domain-like
family: Acylphosphatase-like
domain: Acylphosphatase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.22  E-value=0.095  Score=35.71  Aligned_cols=66  Identities=15%  Similarity=0.165  Sum_probs=50.9

Q ss_pred             EEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEc
Q 029752          112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       112 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~  179 (188)
                      .|+|.-. |+-....+..++.+++-.|.|...+.+.-+|.+||+ .+.|.+|+...+.+=|...|+-+
T Consensus         8 ~V~G~VQ-GVGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~qG~-~~~i~~f~~~l~~gp~~a~V~~i   73 (90)
T d1w2ia_           8 KIYGRVQ-GVGFRWSMQREARKLGVNGWVRNLPDGSVEAVLEGD-EERVEALIGWAHQGPPLARVTRV   73 (90)
T ss_dssp             EEEEECS-SSSHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEE-HHHHHHHHHHTTTCSTTCEEEEE
T ss_pred             EEEEeEe-CcCChHHHHHHHHHcCCeEEEEECCCCCEEEEEECC-HHHHHHHHHHHHhCcCCcEEEEE
Confidence            4567555 888999999999999999999887777789999998 67787787655444344555544

>d1neea1 d.241.1.1 (A:1-98) Translation initiation factor 2 beta, aIF2beta, N-terminal domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a+b)
fold: Ribosome binding domain-like
superfamily: Translation initiation factor 2 beta, aIF2beta, N-terminal domain
family: Translation initiation factor 2 beta, aIF2beta, N-terminal domain
domain: Translation initiation factor 2 beta, aIF2beta, N-terminal domain
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.88  E-value=0.011  Score=41.55  Aligned_cols=56  Identities=13%  Similarity=0.154  Sum_probs=44.4

Q ss_pred             CCeeEEEEeccCCC----CCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhC
Q 029752          106 KRKCITTVKGLELF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW  168 (188)
Q Consensus       106 grK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~  168 (188)
                      |+|  |++.++...    .-|+.-+.|.|.+.+||.|++     .++.++|+|.+.....+-+..+|
T Consensus        36 Gkk--Tii~Nf~~Ia~~L~R~p~hl~kfl~~ELgt~g~i-----~~~~lii~G~~~~~~i~~~l~~y   95 (98)
T d1neea1          36 GNR--TFIQNFREVADALNRDPQHLLKFLLRELGTAGNL-----EGGRAILQGKFTHFLINERIEDY   95 (98)
T ss_dssp             TTE--EEESCHHHHHHHHCSSHHHHHHHHHHHCCSCCCC-----BTTTEEEESSCSSSHHHHHHHHH
T ss_pred             cce--EEEechHHHHHHHCCCHHHHHHHHHHHhCCceEE-----eCCEEEEEeeeCHHHHHHHHHHH
Confidence            555  778898764    458999999999999999999     24579999998877666655554

>d1ulra_ d.58.10.1 (A:) Acylphosphatase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Acylphosphatase/BLUF domain-like
family: Acylphosphatase-like
domain: Acylphosphatase
species: Thermus thermophilus [TaxId: 274]

Probab=93.46  E-value=0.13  Score=34.75  Aligned_cols=68  Identities=15%  Similarity=0.121  Sum_probs=51.8

Q ss_pred             EEEeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCCCCCCCcEEEcc
Q 029752          111 TTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIE  180 (188)
Q Consensus       111 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~~ip~~~I~~~~  180 (188)
                      -+|+|.-. |+-.....+.++.+++-.|.|...+.+.-+|.+||+- +.|.+|+...+.|=|...|+-++
T Consensus         5 ~iV~G~VQ-GVGFR~~~~~~A~~~~l~G~V~N~~dG~Vei~~~G~~-~~v~~f~~~l~~gp~~a~V~~v~   72 (87)
T d1ulra_           5 ALVKGRVQ-GVGYRAFAQKKALELGLSGYAENLPDGRVEVVAEGPK-EALELFLHHLKQGPRLARVEAVE   72 (87)
T ss_dssp             EEEEEECS-SSSHHHHHHHHHHHTTCEEEEEECTTSCEEEEEESCH-HHHHHHHHHHHHCSTTCEEEEEE
T ss_pred             EEEEEEEe-CccCHHHHHHHHHHcCCeEEEEECCCCCEEEEEEECH-HHHHHHHHHHhhCCCCcEEEEEE
Confidence            36778665 8899999999999999999998878888899999983 55666665444344556666654

>d1urra_ d.58.10.1 (A:) Acylphosphatase 2 (Cg18505) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Acylphosphatase/BLUF domain-like
family: Acylphosphatase-like
domain: Acylphosphatase 2 (Cg18505)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.61  E-value=0.34  Score=32.87  Aligned_cols=64  Identities=8%  Similarity=0.175  Sum_probs=47.2

Q ss_pred             EeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCc--hHHHHHHHHhhCCCCCCCcEEEc
Q 029752          113 VKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI--SYDIVEFITDTWPDVPETAIFFI  179 (188)
Q Consensus       113 V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~--~~~v~~~L~~~~~~ip~~~I~~~  179 (188)
                      |.|.-. |+-....+..++.+++..|.|...+.|.-+|++||+-  .+...++|...  +=|...|+-+
T Consensus        12 V~G~VQ-GVGFR~~~~~~A~~l~l~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~~--~p~~a~V~~i   77 (97)
T d1urra_          12 IFGRVQ-GVFFRKHTSHEAKRLGVRGWCMNTRDGTVKGQLEAPMMNLMEMKHWLENN--RIPNAKVSKA   77 (97)
T ss_dssp             EEEECS-SSSHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEECHHHHHHHHHHHHHC--CSTTCEEEEE
T ss_pred             EEEEec-CcCChHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhhC--CCCCcEEEEE
Confidence            778776 8999999999999999999998877787899999973  33444444433  2334555443

>d1apsa_ d.58.10.1 (A:) Acylphosphatase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Acylphosphatase/BLUF domain-like
family: Acylphosphatase-like
domain: Acylphosphatase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=87.69  E-value=0.28  Score=33.37  Aligned_cols=55  Identities=16%  Similarity=0.027  Sum_probs=44.8

Q ss_pred             EeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhCC
Q 029752          113 VKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWP  169 (188)
Q Consensus       113 V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~~  169 (188)
                      |+|--. |+-....+...+.+++-.|.|...+.|.-+|++||+ .+.|.+|+...+.
T Consensus        13 V~G~VQ-GVGFR~~~~~~A~~~~l~G~V~N~~dG~Vei~~qG~-~~~i~~f~~~l~~   67 (98)
T d1apsa_          13 VFGRVQ-GVCFRMYAEDEARKIGVVGWVKNTSKGTVTGQVQGP-EEKVNSMKSWLSK   67 (98)
T ss_dssp             EECTTS-CCCCTTHHHHHHHHHTCEEEEECCTTCEEEEEEEEE-HHHHHHHHHSSSS
T ss_pred             EEEeEc-CcCcHHHHHHHHHHcCCeEEEEECCCCCEEEEEEcC-HHHHHHHHHHHHh
Confidence            677665 788888999999999999999776777789999997 5777888776543

>d2acya_ d.58.10.1 (A:) Acylphosphatase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Acylphosphatase/BLUF domain-like
family: Acylphosphatase-like
domain: Acylphosphatase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=86.60  E-value=1.1  Score=30.24  Aligned_cols=65  Identities=18%  Similarity=0.088  Sum_probs=48.7

Q ss_pred             EeccCCCCCcHHHHHHHHhhhcccceeEeeCCCCCceEEEcCCchHHHHHHHHhhC-CCCCCCcEEEc
Q 029752          113 VKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW-PDVPETAIFFI  179 (188)
Q Consensus       113 V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~iQGD~~~~v~~~L~~~~-~~ip~~~I~~~  179 (188)
                      |+|--. |+-....+...+.+++=.|.|...+.+.-+|++||+ ...|.+||.... .+=|...|+-+
T Consensus        13 V~G~VQ-GVGFR~~v~~~A~~l~L~G~V~N~~dG~Vei~~qG~-~~~i~~f~~~l~~~gp~~a~V~~i   78 (98)
T d2acya_          13 IFGKVQ-GVFFRKYTQAEGKKLGLVGWVQNTDQGTVQGQLQGP-ASKVRHMQEWLETKGSPKSHIDRA   78 (98)
T ss_dssp             EEEECS-SSSHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEE-HHHHHHHHHHHHHTCSTTCEEEEE
T ss_pred             EEEEEc-CcCchHHHHHHHHHcCCEEEEEECCCCeEEEEEEEC-HHHHHHHHHHHHhcCCCCcEEEEE
Confidence            667665 888899999999999999999887778889999998 555666655332 24455556543