Citrus Sinensis ID: 029778

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------19
Protein Sequence
MSGGSTPVAGGYMRQRHSQGYASSGDDLEDDACSRPQPFSPSIPRAKTWVEILENVLWIASALFIIYYGDRHSNFIYLLWHDERIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPYVTLLGVVSFFLLSFALWPIWSFLTLPLLFTLFMASMVIFPHSMIGTLRPQNDAFRID
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccEEEccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccHEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEccHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccc
Coil and Loop (DISEMBL)
msggstpvaggymrqrhsqgyassgddleddacsrpqpfspsiprAKTWVEILENVLWIASALFIIYYGDRHSNFIYLLWHDERIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPYVTLLGVVSFFLLSFAlwpiwsfltlpLLFTLFMASmvifphsmigtlrpqndafrid
Flexible Loop (DISEMBL)
msggstpvaggymrqrhSQGYASSGDDLEDDACSRPQPfspsiprakTWVEILENVLWIASALFIIYYGDRHSNFIYLLWHDERIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPYVTLLGVVSFFLLSFALWPIWSFLTLPLLFTLFMASMVIFPHsmigtlrpqndafrid
Low Complexity Region (SEG)
MSGGSTPVAGGYMRQRHSQGYASSGDDLEDDACSRPQPFSPSIPRAKTWVEILENVLWIASALFIIYYGDRHSNFIYLLWHDERIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPYvtllgvvsffllsfalWPIWSfltlpllftlfMASMVIFPHSMIGTLRPQNDAFRID
Disordered region (IsUnstruct)
*********************************************AKTWVEILENVLWIASALFIIYYGDRHSNFIYLLWHDERIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPYVTLLGVVSFFLLSFALWPIWSFLTLPLLFTLFMASMVIFPHSMIGTL**********
Disordered Region (DISOPRED)
**************************************************EILENVLWIASALFIIYYGDRHSNFIYLLWHDERIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPYVTLLGVVSFFLLSFALWPIWSFLTLPLLFTLFMASMVIFPHSMIGTLRPQ*******
Disordered Region (DISEMBL)
MSGGSTPVAGGYMRQRHS*******************PFSPSIPRAKTWVEILENVLWIASALFIIYYGDRHSNFIYLLWHDERIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPYVTLLGVVSFFLLSFALWPIWSFLTLPLLFTLFMASMVIFPHSMIGTLRPQNDAFRID
Disordered Region (DISPRO)
******************************DACSRP***SPSIPRAKTWVEILENVLWIASALFIIYYGDRHSNFIYLLWHDERIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPYVTLLGVVSFFLLSFALWPIWSFLTLPLLFTLFMASMVIFPHSMIGTLRPQND*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSGGSTPVAGGYMRQRHSQGYASSGDDLEDDACSRPQPFSPSIPRAKTWVEILENVLWIASALFIIYYGDRHSNFIYLLWHDERIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPYVTLLGVVSFFLLSFALWPIWSFLTLPLLFTLFMASMVIFPHSMIGTLRPQNDAFRID
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	188
449521800	187	PREDICTED: uncharacterized LOC101212505	0.994	1.0	0.723	3e-76
449464600	187	PREDICTED: uncharacterized protein LOC10	0.994	1.0	0.723	4e-76
255566971	187	conserved hypothetical protein [Ricinus	0.994	1.0	0.797	2e-74
357478013	856	hypothetical protein MTR_4g114100 [Medic	0.984	0.216	0.671	1e-69
224122574	188	predicted protein [Populus trichocarpa]	0.941	0.941	0.785	4e-68
225445452	187	PREDICTED: uncharacterized protein LOC10	0.994	1.0	0.734	1e-67
297808079	188	hypothetical protein ARALYDRAFT_910052 [	0.941	0.941	0.723	4e-64
15241270	188	uncharacterized protein [Arabidopsis tha	0.941	0.941	0.717	2e-63
356563030	194	PREDICTED: uncharacterized protein LOC10	0.936	0.907	0.664	4e-56
356548597	194	PREDICTED: uncharacterized protein LOC10	0.936	0.907	0.653	9e-55

>gi|449521800|ref|XP_004167917.1| PREDICTED: uncharacterized LOC101212505 [Cucumis sativus]

 Score =  289 bits (740), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 136/188 (72%), Positives = 157/188 (83%), Gaps = 1/188 (0%)

Query: 1   MSGGSTPVAGGYMRQRHSQGYASSGDDLEDDACSRPQPFSPSIPRAKTWVEILENVLWIA 60
           MSGG TPVAGGYMRQRHSQGYASSGDD+EDDACSR Q  S   P+++TW+E++ENVLW+ 
Sbjct: 1   MSGG-TPVAGGYMRQRHSQGYASSGDDIEDDACSRFQTMSFHTPKSRTWIEVVENVLWLV 59

Query: 61  SALFIIYYGDRHSNFIYLLWHDERIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEK 120
           SA FI+YYGDRHSN IYLLWHD R+RRLPLYLGMV +GLN+  F YTSM  W++RRFDEK
Sbjct: 60  SATFIVYYGDRHSNMIYLLWHDGRVRRLPLYLGMVGIGLNIVIFIYTSMSAWSIRRFDEK 119

Query: 121 WESFCISALPYVTLLGVVSFFLLSFALWPIWSFLTLPLLFTLFMASMVIFPHSMIGTLRP 180
           WE   +S LP VTLLG++SF LLSFALWPIW FLTLPLLFT+FMA MV+FP+ MIG  RP
Sbjct: 120 WELASLSVLPIVTLLGLISFCLLSFALWPIWGFLTLPLLFTMFMACMVVFPNIMIGKFRP 179

Query: 181 QNDAFRID 188
           Q+D  R D
Sbjct: 180 QSDFLRTD 187

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449464600|ref|XP_004150017.1| PREDICTED: uncharacterized protein LOC101212505 [Cucumis sativus]

 Score =  289 bits (739), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 136/188 (72%), Positives = 157/188 (83%), Gaps = 1/188 (0%)

Query: 1   MSGGSTPVAGGYMRQRHSQGYASSGDDLEDDACSRPQPFSPSIPRAKTWVEILENVLWIA 60
           MSGG TPVAGGYMRQRHSQGYASSGDD+EDDACSR Q  S   P+++TW+E++ENVLW+ 
Sbjct: 1   MSGG-TPVAGGYMRQRHSQGYASSGDDIEDDACSRFQTMSFHTPKSRTWIEVVENVLWLV 59

Query: 61  SALFIIYYGDRHSNFIYLLWHDERIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEK 120
           SA FI+YYGDRHSN IYLLWHD R+RRLPLYLGMV +GLN+  F YTSM  W++RRFDEK
Sbjct: 60  SAAFIVYYGDRHSNMIYLLWHDGRVRRLPLYLGMVGIGLNIVIFIYTSMSAWSIRRFDEK 119

Query: 121 WESFCISALPYVTLLGVVSFFLLSFALWPIWSFLTLPLLFTLFMASMVIFPHSMIGTLRP 180
           WE   +S LP VTLLG++SF LLSFALWPIW FLTLPLLFT+FMA MV+FP+ MIG  RP
Sbjct: 120 WELASLSVLPIVTLLGLISFCLLSFALWPIWGFLTLPLLFTMFMACMVVFPNIMIGKFRP 179

Query: 181 QNDAFRID 188
           Q+D  R D
Sbjct: 180 QSDFLRTD 187

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255566971|ref|XP_002524468.1| conserved hypothetical protein [Ricinus communis] gi|223536256|gb|EEF37908.1| conserved hypothetical protein [Ricinus communis]

 Score =  283 bits (724), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 150/188 (79%), Positives = 161/188 (85%), Gaps = 1/188 (0%)

Query: 1   MSGGSTPVAGGYMRQRHSQGYASSGDDLEDDACSRPQPFSPSIPRAKTWVEILENVLWIA 60
           MSGGS PV GGYMRQRHSQGYAS GDDLEDDACSRPQPFS   PR ++WVEI+ENVLWIA
Sbjct: 1   MSGGS-PVGGGYMRQRHSQGYASGGDDLEDDACSRPQPFSTPSPRVRSWVEIVENVLWIA 59

Query: 61  SALFIIYYGDRHSNFIYLLWHDERIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEK 120
           SA+FI+Y+GDRH N IYLLWHD RIRRLPLYLGM+ VGLNV  FFYTS+  W+VRRFDEK
Sbjct: 60  SAIFIVYFGDRHCNLIYLLWHDGRIRRLPLYLGMIGVGLNVVIFFYTSVFAWSVRRFDEK 119

Query: 121 WESFCISALPYVTLLGVVSFFLLSFALWPIWSFLTLPLLFTLFMASMVIFPHSMIGTLRP 180
           WE   ISALP VTLLG+VSF L SFALWPIWSFLTLPLLFTLFMA MVIFPH MIGT + 
Sbjct: 120 WELSSISALPLVTLLGLVSFSLFSFALWPIWSFLTLPLLFTLFMACMVIFPHIMIGTFKQ 179

Query: 181 QNDAFRID 188
            ND FRID
Sbjct: 180 PNDTFRID 187

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357478013|ref|XP_003609292.1| hypothetical protein MTR_4g114100 [Medicago truncatula] gi|355510347|gb|AES91489.1| hypothetical protein MTR_4g114100 [Medicago truncatula]

 Score =  267 bits (683), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 129/192 (67%), Positives = 150/192 (78%), Gaps = 7/192 (3%)

Query: 4   GSTPV-AGGYMRQRHSQGYASSGDDLEDDACSRPQPFSPSIPRAKTWVEILENVLWIASA 62
           G TPV AGG MRQRHSQGYASSGDDLEDDACSR + F P  P  KTW+E+LEN LW+ASA
Sbjct: 665 GGTPVGAGGLMRQRHSQGYASSGDDLEDDACSRQRAFLPPSPPKKTWIELLENFLWLASA 724

Query: 63  LFIIYYGDRHSNFIYLLWHDERIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDE--- 119
            FI+Y+GD+HSNFIYLL HD+RIRRLPLYLGM+ +GLN   F YT++L W+VRRFDE   
Sbjct: 725 AFILYFGDQHSNFIYLLCHDDRIRRLPLYLGMIGIGLNTLIFVYTTILAWSVRRFDEKWG 784

Query: 120 --KWESFCISALPYVTLLGVVSFFLLSFALWPIWSFLTLPLLFTLFMASMVIFPHSMIGT 177
             KWE   I+ LP+ T  G+ SF L +FALWPIWSFLT+PLLFTLFMA MV+ P+ + G 
Sbjct: 785 LMKWEITSITVLPFATGFGITSFCLFTFALWPIWSFLTIPLLFTLFMACMVVIPYLIFGI 844

Query: 178 L-RPQNDAFRID 188
           L RPQND FR D
Sbjct: 845 LGRPQNDEFRTD 856

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122574|ref|XP_002330515.1| predicted protein [Populus trichocarpa] gi|222872449|gb|EEF09580.1| predicted protein [Populus trichocarpa]

 Score =  262 bits (670), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 139/177 (78%), Positives = 151/177 (85%)

Query: 12  YMRQRHSQGYASSGDDLEDDACSRPQPFSPSIPRAKTWVEILENVLWIASALFIIYYGDR 71
           Y+RQRHSQGYASSGDDLEDDACSR QPFSP   R + W+EI+ENV+WIASA+FIIY+GDR
Sbjct: 12  YIRQRHSQGYASSGDDLEDDACSRAQPFSPPNQRVRPWLEIVENVIWIASAIFIIYFGDR 71

Query: 72  HSNFIYLLWHDERIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPY 131
            SN IYLLWHDERIRRLPLYLGMV VGLN+  F YT M  W+VRRFDEKWE   IS LP 
Sbjct: 72  RSNLIYLLWHDERIRRLPLYLGMVGVGLNILIFLYTIMFAWSVRRFDEKWELSSISTLPL 131

Query: 132 VTLLGVVSFFLLSFALWPIWSFLTLPLLFTLFMASMVIFPHSMIGTLRPQNDAFRID 188
           VTLLG+VSF L SF+LWPIWSFLTLPLLFTLFMA MVIFP+ MIGT R QNDAFRID
Sbjct: 132 VTLLGLVSFCLFSFSLWPIWSFLTLPLLFTLFMACMVIFPNIMIGTFRTQNDAFRID 188

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445452|ref|XP_002285091.1| PREDICTED: uncharacterized protein LOC100261198 [Vitis vinifera] gi|297738931|emb|CBI28176.3| unnamed protein product [Vitis vinifera]

 Score =  260 bits (665), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 138/188 (73%), Positives = 157/188 (83%), Gaps = 1/188 (0%)

Query: 1   MSGGSTPVAGGYMRQRHSQGYASSGDDLEDDACSRPQPFSPSIPRAKTWVEILENVLWIA 60
           MSGG TPV GG+MRQRHSQGYASSGDDLEDDACSR  P SP++PRA+TW E++EN+LWIA
Sbjct: 1   MSGG-TPVGGGFMRQRHSQGYASSGDDLEDDACSRQTPSSPAMPRARTWTEVMENILWIA 59

Query: 61  SALFIIYYGDRHSNFIYLLWHDERIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEK 120
           SA+FIIYYGDR+SNFIYLL HD+RIRRLPLYLGMV V LN+  FFYTSM    V++F EK
Sbjct: 60  SAVFIIYYGDRNSNFIYLLLHDDRIRRLPLYLGMVGVSLNILIFFYTSMFASGVKKFCEK 119

Query: 121 WESFCISALPYVTLLGVVSFFLLSFALWPIWSFLTLPLLFTLFMASMVIFPHSMIGTLRP 180
           WE    SALP++TLLG+VSF L SFALWPIWSFLTLPLLFTLFMA +V  P+ M GTLRP
Sbjct: 120 WELSSPSALPFLTLLGLVSFCLFSFALWPIWSFLTLPLLFTLFMACIVASPYVMTGTLRP 179

Query: 181 QNDAFRID 188
           Q +  R D
Sbjct: 180 QTEVLRTD 187

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297808079|ref|XP_002871923.1| hypothetical protein ARALYDRAFT_910052 [Arabidopsis lyrata subsp. lyrata] gi|297317760|gb|EFH48182.1| hypothetical protein ARALYDRAFT_910052 [Arabidopsis lyrata subsp. lyrata]

 Score =  249 bits (635), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 128/177 (72%), Positives = 150/177 (84%)

Query: 12  YMRQRHSQGYASSGDDLEDDACSRPQPFSPSIPRAKTWVEILENVLWIASALFIIYYGDR 71
           Y+RQRHSQGYAS GDDLEDDACSRPQPFS   PR+KTWVEILENVLWIASA+FI+Y+GDR
Sbjct: 12  YIRQRHSQGYASGGDDLEDDACSRPQPFSLENPRSKTWVEILENVLWIASAVFIVYFGDR 71

Query: 72  HSNFIYLLWHDERIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPY 131
           HSN I++L HD RI+R+PLY GM+ + +N+    Y SML W++RRFDEKWE + ISALP+
Sbjct: 72  HSNMIHILLHDARIKRMPLYFGMLGIAVNIIIIIYESMLSWSMRRFDEKWELWSISALPF 131

Query: 132 VTLLGVVSFFLLSFALWPIWSFLTLPLLFTLFMASMVIFPHSMIGTLRPQNDAFRID 188
           +TLLG++SF LLSFALWPIW FLTLPLLFTLFMA +V+FPH MI   RPQND  RID
Sbjct: 132 ITLLGLISFGLLSFALWPIWGFLTLPLLFTLFMACLVVFPHLMIIKFRPQNDELRID 188

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15241270|ref|NP_197512.1| uncharacterized protein [Arabidopsis thaliana] gi|28466915|gb|AAO44066.1| At5g20120 [Arabidopsis thaliana] gi|110743897|dbj|BAE99783.1| hypothetical protein [Arabidopsis thaliana] gi|332005414|gb|AED92797.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  246 bits (629), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 127/177 (71%), Positives = 149/177 (84%)

Query: 12  YMRQRHSQGYASSGDDLEDDACSRPQPFSPSIPRAKTWVEILENVLWIASALFIIYYGDR 71
           Y+RQRHSQGYAS GDDLEDDACSRPQPFS   PR+KTWVEILENVLWIASA+FI+Y+GDR
Sbjct: 12  YIRQRHSQGYASGGDDLEDDACSRPQPFSLENPRSKTWVEILENVLWIASAVFIVYFGDR 71

Query: 72  HSNFIYLLWHDERIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPY 131
           HSN I++L  D RI+R+PLY GM+ + +N+    Y SML W++RRFDEKWE + ISALP+
Sbjct: 72  HSNMIHILLRDARIKRMPLYFGMLGIAVNIIIIIYESMLSWSMRRFDEKWELWSISALPF 131

Query: 132 VTLLGVVSFFLLSFALWPIWSFLTLPLLFTLFMASMVIFPHSMIGTLRPQNDAFRID 188
           +TLLG++SF LLSFALWPIW FLTLPLLFTLFMA +V+FPH MI   RPQND  RID
Sbjct: 132 ITLLGIISFGLLSFALWPIWGFLTLPLLFTLFMACLVVFPHLMIIKFRPQNDELRID 188

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563030|ref|XP_003549769.1| PREDICTED: uncharacterized protein LOC100818154 [Glycine max]

 Score =  222 bits (566), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 121/182 (66%), Positives = 141/182 (77%), Gaps = 6/182 (3%)

Query: 13  MRQRHSQGYASSGDDLEDDACSRPQPFSPSIPRAKTWVEILENVLWIASALFIIYYGDRH 72
           MRQRHSQGYASSGDDLEDDACSR +PF    P  +TW+E+LEN LW+ASA FI+Y+GD+H
Sbjct: 13  MRQRHSQGYASSGDDLEDDACSRHRPFLAPSPPPRTWIEMLENFLWLASAAFILYFGDQH 72

Query: 73  SNFIYLLWHDERIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDE-----KWESFCIS 127
           SN IYLL HD RIRRLPLYLGM+ +GLN   F YT++LVW+ RRFDE     KWE   IS
Sbjct: 73  SNLIYLLCHDNRIRRLPLYLGMIGIGLNTMIFIYTTILVWSARRFDEKWGLKKWEVTSIS 132

Query: 128 ALPYVTLLGVVSFFLLSFALWPIWSFLTLPLLFTLFMASMVIFPHSMIGTLRPQ-NDAFR 186
            LP+ T+ G++SF + SFALWPIWSFLTLPLLFTLFMA MV+ P  + GTLRPQ  D  R
Sbjct: 133 VLPFATVFGIISFCMFSFALWPIWSFLTLPLLFTLFMACMVVIPCLIFGTLRPQYYDELR 192

Query: 187 ID 188
            D
Sbjct: 193 TD 194

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548597|ref|XP_003542687.1| PREDICTED: uncharacterized protein LOC100792201 [Glycine max]

 Score =  218 bits (555), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 119/182 (65%), Positives = 139/182 (76%), Gaps = 6/182 (3%)

Query: 13  MRQRHSQGYASSGDDLEDDACSRPQPFSPSIPRAKTWVEILENVLWIASALFIIYYGDRH 72
           MRQRHSQGYASSGDDLEDDACSR +PF    P  +TW+E+LEN LW+ASA FI+Y+GD+H
Sbjct: 13  MRQRHSQGYASSGDDLEDDACSRHRPFLAPSPPPRTWIEMLENFLWLASAAFILYFGDQH 72

Query: 73  SNFIYLLWHDERIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDE-----KWESFCIS 127
           SN IYLL HD RI+R PLYLGM+ +GLN+  F YT+ L W+ RRFDE     KWE   IS
Sbjct: 73  SNLIYLLCHDNRIKRPPLYLGMIGIGLNIMIFIYTTTLAWSARRFDEKWGLKKWEITSIS 132

Query: 128 ALPYVTLLGVVSFFLLSFALWPIWSFLTLPLLFTLFMASMVIFPHSMIGTLRPQ-NDAFR 186
            LP+ T+ G++SF L SFALWPIWSFLTLPLLFTLFMA MV+ P  + GTLRPQ  D  R
Sbjct: 133 VLPFATVFGIISFCLFSFALWPIWSFLTLPLLFTLFMACMVVIPCLIFGTLRPQYYDELR 192

Query: 187 ID 188
            D
Sbjct: 193 TD 194

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	188
TAIR|locus:2149219	188	AT5G20120 "AT5G20120" [Arabido	0.994	0.994	0.597	2.5e-58

TAIR|locus:2149219 AT5G20120 "AT5G20120" [Arabidopsis thaliana (taxid:3702)]

 Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
 Identities = 113/189 (59%), Positives = 132/189 (69%)

Query:     1 MSGGSTPVAGG-YMRQRHSQGYASSGDDLEDDACSRPQPFSPSIPRAKTWVEILENVLWI 59
             MSGG TPV GG Y+RQRHSQGYAS GDDLEDDACSRPQPFS   PR+KTWVEILENVLWI
Sbjct:     1 MSGG-TPVGGGGYIRQRHSQGYASGGDDLEDDACSRPQPFSLENPRSKTWVEILENVLWI 59

Query:    60 ASALFIIYYGDRHSNFIYLLWHDERIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDE 119
             ASA+FI+Y+GDRHSN I++L  D RI+R+PLY GM+ + +N+    Y SML W++RRFDE
Sbjct:    60 ASAVFIVYFGDRHSNMIHILLRDARIKRMPLYFGMLGIAVNIIIIIYESMLSWSMRRFDE 119

Query:   120 KWESFCISALPYXXXXXXXXXXXXXXXXWPIWSXXXXXXXXXXXMASMVIFPHSMIGTLR 179
             KWE + ISALP+                WPIW            MA +V+FPH MI   R
Sbjct:   120 KWELWSISALPFITLLGIISFGLLSFALWPIWGFLTLPLLFTLFMACLVVFPHLMIIKFR 179

Query:   180 PQNDAFRID 188
             PQND  RID
Sbjct:   180 PQNDELRID 188


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.140   0.471    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      188       161   0.00074  107 3  11 22  0.44    31
                                                     30  0.44    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  179 KB (2102 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  15.09u 0.09s 15.18t   Elapsed:  00:00:01
  Total cpu time:  15.09u 0.09s 15.18t   Elapsed:  00:00:02
  Start:  Thu May  9 17:29:19 2013   End:  Thu May  9 17:29:21 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.01450022 hypothetical protein (189 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	188
PF10856	118	DUF2678: Protein of unknown function (DUF2678); In	84.97
PF13937	81	DUF4212: Domain of unknown function (DUF4212)	83.42
PF03348	429	Serinc: Serine incorporator (Serinc); InterPro: IP	83.3

>PF10856 DUF2678: Protein of unknown function (DUF2678); InterPro: IPR022564 This family of proteins has no known function

Probab=84.97  E-value=1.9  Score=34.50  Aligned_cols=61  Identities=10%  Similarity=0.111  Sum_probs=43.9

Q ss_pred             cCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhhhccccchhhhccCchhHHHHHHHHHHHHHHhhhhhh
Q 029778           82 DERIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPYVTLLGVVSFFLLSFALWPI  150 (188)
Q Consensus        82 d~~i~r~~f~lgll~l~i~~~i~~Y~~v~l~~ik~~~~~wE~~~P~~iPiaT~~gi~s~i~f~iALWPV  150 (188)
                      +++..-.+|.+.+++++++..+      +.+|+|+-|  -|-+.-..|...+++-++..+|-|.=.|.|
T Consensus        56 ~p~p~~iffavcI~l~~~s~~l------LI~WYR~gd--l~Pkfr~li~~~~~~ivllci~anlYf~~~  116 (118)
T PF10856_consen   56 PPKPLHIFFAVCILLICISAIL------LIFWYRQGD--LDPKFRYLIYYNCFSIVLLCICANLYFHDV  116 (118)
T ss_pred             CCCceEEehHHHHHHHHHHHHh------heeehhcCC--CChhHHHHHHHHHHHHHHHHHhheeEEeec
Confidence            3666678887777777666544      345677543  444556789999999999999998877654

>PF13937 DUF4212: Domain of unknown function (DUF4212)

Probab=83.42  E-value=4.4  Score=30.17  Aligned_cols=71  Identities=20%  Similarity=0.466  Sum_probs=40.5

Q ss_pred             chhhhHHHHHH-----HHHHHHHHHHH-HhhccccchhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhhhcc
Q 029778           44 PRAKTWVEILE-----NVLWIASALFI-IYYGDRHSNFIYLLWHDERIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRF  117 (188)
Q Consensus        44 ~r~~~w~~~lh-----svfWI~aai~v-~YY~DF~~nl~~vll~d~~i~r~~f~lgll~l~i~~~i~~Y~~v~l~~ik~~  117 (188)
                      ++.+.|++++.     =+.|.++|.++ +++.|-        ++..++-.+++.-=+..-|.-+++.+-+.+|.+...+.
T Consensus         2 ~~~~yWr~n~rl~~~lL~iW~vvsfg~~~lfa~~--------Ln~~~~~GfPlgfw~aaQGsi~~fviLi~~Ya~~mnrl   73 (81)
T PF13937_consen    2 PARAYWRKNLRLIAILLAIWFVVSFGVGILFADE--------LNQITFGGFPLGFWFAAQGSIIVFVILIFVYAWRMNRL   73 (81)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HcCCeeCCCChHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence            45678988875     45677777777 776654        44455666665533333332223333333566666666


Q ss_pred             ccchh
Q 029778          118 DEKWE  122 (188)
Q Consensus       118 ~~~wE  122 (188)
                      |+++.
T Consensus        74 D~~~g   78 (81)
T PF13937_consen   74 DRKYG   78 (81)
T ss_pred             HHHHC
Confidence            66654

>PF03348 Serinc: Serine incorporator (Serinc); InterPro: IPR005016 This is a family of proteins which display differential expression in various tumour and cell lines

Probab=83.30  E-value=14  Score=34.94  Aligned_cols=117  Identities=15%  Similarity=0.165  Sum_probs=69.0

Q ss_pred             HHHHHHHHH--HHHHHHHhhccccchhhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHH---hhh---hhhccccchh
Q 029778           51 EILENVLWI--ASALFIIYYGDRHSNFIYLLWHDERIRRLPLYLGMVLVGLNVAFFFYTSM---LVW---NVRRFDEKWE  122 (188)
Q Consensus        51 ~~lhsvfWI--~aai~v~YY~DF~~nl~~vll~d~~i~r~~f~lgll~l~i~~~i~~Y~~v---~l~---~ik~~~~~wE  122 (188)
                      ..+|+.+|.  ....+..-.+=|   |    .-|+..-..|.++|.++.++++.|=+.+.+   +.|   |+.+.+++=.
T Consensus       105 a~ihng~W~~K~l~l~~l~v~~F---f----iP~~~f~~~~~~v~~~ga~~FiliQlIlLvDFah~wne~w~~~~e~~~s  177 (429)
T PF03348_consen  105 AAIHNGFWFLKFLLLIGLIVGAF---F----IPNGSFINVYMYVARVGAFIFILIQLILLVDFAHSWNESWVEKAEEGNS  177 (429)
T ss_pred             HHHHHhhHHHHHHHHHHHHheeE---E----eCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccC
Confidence            589999998  233333332222   1    234455668888999998888887766543   222   5665543211


Q ss_pred             hhccCchhHHHHHHHHHHHHHHhhhhhhhH-----HhhHHHHHHHHhHH-HHhhcccc
Q 029778          123 SFCISALPYVTLLGVVSFFLLSFALWPIWS-----FLTLPLLFTLFMAS-MVIFPHSM  174 (188)
Q Consensus       123 ~~~P~~iPiaT~~gi~s~i~f~iALWPVW~-----flTP~lLFt~FMGv-v~~~~~~~  174 (188)
                      +.+..++=..|+.+.++++..++.+.--+.     .=+-++-+++-+.+ +.+++.+|
T Consensus       178 ~~w~~~Li~~T~~~y~~si~~~v~~y~~f~~~~C~lN~~fIt~nliL~vi~s~lSv~p  235 (429)
T PF03348_consen  178 KRWYIALIGVTLLFYAASIAGIVLMYVFFTPSGCSLNKFFITFNLILCVIISVLSVLP  235 (429)
T ss_pred             ceehhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHHHHHhhh
Confidence            334677778888888888888887754443     11134455555554 34455555

The function of these proteins is unknown. ; GO: 0016020 membrane

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00