Citrus Sinensis ID: 029833


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------
MILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYSPDWHYKSTMPTFLFLYGAAFAVAHALFRFGIGFKVHYAVLCLLCIPRMYKYYIHTTDVPAKRLAKLYLATITVGSLCWLCDRLFCEKISLWYFNPQGHALWHTFMGFNSYFANTFLMFCRAQQRGWNPKVVHAMGWLPYVKIDKPKVQ
cEEEHHHHHHHHHHccHHHHHccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEccccc
cEEEHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEEEEEccccc
MILAIGSMLYHATLQHMqqqgdetpMVWEMLLYIYILYspdwhykstmptfLFLYGAAFAVAHALFRFGIGFKVHYAVLCLLCIPRMYKYYIHTTDVPAKRLAKLYLATITVGSLCWLCDRLFCEkislwyfnpqghaLWHTFMGFNSYFANTFLMFCRAqqrgwnpkvvhamgwlpyvkidkpkvq
MILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYSPDWHYKSTMPTFLFLYGAAFAVAHALFRFGIGFKVHYAVLCLLCIPRMYKYYIHTTDVPAKRLAKLYLATITVGSLCWLCDRLFCEKISLWYFNPQGHALWHTFMGFNSYFANTFLMFCRAQQRGWNPKVVHAMgwlpyvkidkpkvq
MILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYSPDWHYKSTMPTFLFLYGAAFAVAHALFRFGIGFKVHYAVLCLLCIPRMYKYYIHTTDVPAKRLAKLYLATITVGSLCWLCDRLFCEKISLWYFNPQGHALWHTFMGFNSYFANTFLMFCRAQQRGWNPKVVHAMGWLPYVKIDKPKVQ
**LAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYSPDWHYKSTMPTFLFLYGAAFAVAHALFRFGIGFKVHYAVLCLLCIPRMYKYYIHTTDVPAKRLAKLYLATITVGSLCWLCDRLFCEKISLWYFNPQGHALWHTFMGFNSYFANTFLMFCRAQQRGWNPKVVHAMGWLPYVKI******
MILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYSPDWHYKSTMPTFLFLYGAAFAVAHALFRFGIGFKVHYAVLCLLCIPRMYKYYIHTTDVPAKRLAKLYLATITVGSLCWLCDRLFCEKISLWYFNPQGHALWHTFMGFNSYFANTFLMFCRAQQRGWNPKVVHAMGWLPYV*ID*****
MILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYSPDWHYKSTMPTFLFLYGAAFAVAHALFRFGIGFKVHYAVLCLLCIPRMYKYYIHTTDVPAKRLAKLYLATITVGSLCWLCDRLFCEKISLWYFNPQGHALWHTFMGFNSYFANTFLMFCRAQQRGWNPKVVHAMGWLPYVKIDKPKVQ
MILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYSPDWHYKSTMPTFLFLYGAAFAVAHALFRFGIGFKVHYAVLCLLCIPRMYKYYIHTTDVPAKRLAKLYLATITVGSLCWLCDRLFCEKISLWYFNPQGHALWHTFMGFNSYFANTFLMFCRAQQRGWNPKVVHAMGWLPYVKIDK****
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYSPDWHYKSTMPTFLFLYGAAFAVAHALFRFGIGFKVHYAVLCLLCIPRMYKYYIHTTDVPAKRLAKLYLATITVGSLCWLCDRLFCEKISLWYFNPQGHALWHTFMGFNSYFANTFLMFCRAQQRGWNPKVVHAMGWLPYVKIDKPKVQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query187 2.2.26 [Sep-21-2011]
Q9D099267 Alkaline ceramidase 3 OS= yes no 0.951 0.666 0.26 8e-08
Q9VIP7283 Alkaline ceramidase OS=Dr yes no 0.764 0.505 0.291 2e-07
Q6TMJ1288 Putative alkaline ceramid yes no 0.941 0.611 0.235 3e-07
Q9NUN7267 Alkaline ceramidase 3 OS= yes no 0.930 0.651 0.257 8e-07
Q55DQ0285 Putative alkaline ceramid no no 0.882 0.578 0.245 0.0001
Q568I2266 Alkaline ceramidase 1 OS= no no 0.828 0.582 0.260 0.0002
Q5QJU3275 Alkaline ceramidase 2 OS= no no 0.700 0.476 0.264 0.0004
Q8VD53275 Alkaline ceramidase 2 OS= no no 0.770 0.523 0.223 0.0005
>sp|Q9D099|ACER3_MOUSE Alkaline ceramidase 3 OS=Mus musculus GN=Acer3 PE=2 SV=1 Back     alignment and function desciption
 Score = 56.6 bits (135), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 82/200 (41%), Gaps = 22/200 (11%)

Query: 2   ILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILY-------SPDWHYKSTMPTFLFL 54
           ++ +GS  +H TL++  Q  DE PM++   +++Y ++       S ++H   T    LFL
Sbjct: 72  VVGMGSWCFHMTLKYEMQLLDELPMIYSCCIFVYCMFECFKTKSSINYHLLFT----LFL 127

Query: 55  YGAAFAVAHALFRFGIGFKVHYAVLCLLCIPRMYKYYIHTTDVPAKR-LAKLYLATITVG 113
           Y       +   +  I  +V Y +L    + R    YI T   P  R L    L    +G
Sbjct: 128 YSLTVTTIYLKVKEPIFHQVMYGMLVFTLVLR--SIYIVTWVYPWLRGLGYTSLTVFLLG 185

Query: 114 SLCWLCDRLFCEKIS--------LWYFNPQGHALWHTFMGFNSYFANTFLMFCRAQQRGW 165
            L W  D +FC+ +         +     Q HA WH   G  SY    F ++ R     +
Sbjct: 186 FLLWNIDNIFCDSLRNFRKRVPPVLGVTTQFHAWWHILTGLGSYLHILFSLYTRTLYLRY 245

Query: 166 NPKVVHAMGWLPYVKIDKPK 185
            PKV    G  P V  +  +
Sbjct: 246 RPKVKFLFGIWPAVMFEPQR 265




Hydrolyzes only phytoceramide into phytosphingosine and free fatty acid. Does not have reverse activity.
Mus musculus (taxid: 10090)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: -
>sp|Q9VIP7|ACASE_DROME Alkaline ceramidase OS=Drosophila melanogaster GN=bwa PE=2 SV=2 Back     alignment and function description
>sp|Q6TMJ1|DCD3A_DICDI Putative alkaline ceramidase dcd3A OS=Dictyostelium discoideum GN=dcd3A PE=2 SV=1 Back     alignment and function description
>sp|Q9NUN7|ACER3_HUMAN Alkaline ceramidase 3 OS=Homo sapiens GN=ACER3 PE=1 SV=3 Back     alignment and function description
>sp|Q55DQ0|DCD3B_DICDI Putative alkaline ceramidase dcd3B OS=Dictyostelium discoideum GN=dcd3B PE=3 SV=1 Back     alignment and function description
>sp|Q568I2|ACER1_DANRE Alkaline ceramidase 1 OS=Danio rerio GN=acer1 PE=2 SV=1 Back     alignment and function description
>sp|Q5QJU3|ACER2_HUMAN Alkaline ceramidase 2 OS=Homo sapiens GN=ACER2 PE=1 SV=2 Back     alignment and function description
>sp|Q8VD53|ACER2_MOUSE Alkaline ceramidase 2 OS=Mus musculus GN=Acer2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query187
449432406254 PREDICTED: alkaline ceramidase 3-like [C 1.0 0.736 0.834 1e-90
224055853254 predicted protein [Populus trichocarpa] 1.0 0.736 0.839 1e-89
224118004256 predicted protein [Populus trichocarpa] 1.0 0.730 0.802 6e-89
2832683 386 putative protein [Arabidopsis thaliana] 1.0 0.484 0.807 9e-89
297803888255 ATCES1 [Arabidopsis lyrata subsp. lyrata 1.0 0.733 0.807 8e-88
18415901255 dihydroceramidase [Arabidopsis thaliana] 1.0 0.733 0.807 9e-88
224147238256 predicted protein [Populus trichocarpa] 1.0 0.730 0.780 2e-86
224113865256 predicted protein [Populus trichocarpa] 1.0 0.730 0.780 3e-86
255554723255 alkaline phytoceramidase, putative [Rici 1.0 0.733 0.796 4e-86
357480451255 Alkaline ceramidase [Medicago truncatula 1.0 0.733 0.791 7e-85
>gi|449432406|ref|XP_004133990.1| PREDICTED: alkaline ceramidase 3-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  337 bits (865), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 156/187 (83%), Positives = 169/187 (90%)

Query: 1   MILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYSPDWHYKSTMPTFLFLYGAAFA 60
           M+LAIGSMLYHATLQ +QQQGDETPMVWEMLLYIYILYSPDWHY+STMPTFLFLYGAAFA
Sbjct: 68  MVLAIGSMLYHATLQRVQQQGDETPMVWEMLLYIYILYSPDWHYRSTMPTFLFLYGAAFA 127

Query: 61  VAHALFRFGIGFKVHYAVLCLLCIPRMYKYYIHTTDVPAKRLAKLYLATITVGSLCWLCD 120
           VAHA+ RFG GFKVHYA+LCLLCIPRMYKYYIHT DV AKRLAKLYL TI++G++CWL D
Sbjct: 128 VAHAIIRFGAGFKVHYAILCLLCIPRMYKYYIHTNDVHAKRLAKLYLTTISLGTVCWLFD 187

Query: 121 RLFCEKISLWYFNPQGHALWHTFMGFNSYFANTFLMFCRAQQRGWNPKVVHAMGWLPYVK 180
           RL+C KIS WYFNPQGHALWH  MGFNSYFANTFLMFCRAQQ  WNP+VVH +G  PYVK
Sbjct: 188 RLYCRKISSWYFNPQGHALWHVLMGFNSYFANTFLMFCRAQQLEWNPRVVHFLGLFPYVK 247

Query: 181 IDKPKVQ 187
           + KPK Q
Sbjct: 248 VQKPKSQ 254




Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224055853|ref|XP_002298686.1| predicted protein [Populus trichocarpa] gi|222845944|gb|EEE83491.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224118004|ref|XP_002331534.1| predicted protein [Populus trichocarpa] gi|222873758|gb|EEF10889.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|2832683|emb|CAA16783.1| putative protein [Arabidopsis thaliana] gi|7269079|emb|CAB79188.1| putative protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297803888|ref|XP_002869828.1| ATCES1 [Arabidopsis lyrata subsp. lyrata] gi|297315664|gb|EFH46087.1| ATCES1 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18415901|ref|NP_567660.1| dihydroceramidase [Arabidopsis thaliana] gi|14488266|dbj|BAB60897.1| Acyl-CoA independent ceramide synthase [Arabidopsis thaliana] gi|30793847|gb|AAP40376.1| unknown protein [Arabidopsis thaliana] gi|30794039|gb|AAP40465.1| unknown protein [Arabidopsis thaliana] gi|332659194|gb|AEE84594.1| dihydroceramidase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224147238|ref|XP_002336433.1| predicted protein [Populus trichocarpa] gi|222835008|gb|EEE73457.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224113865|ref|XP_002316596.1| predicted protein [Populus trichocarpa] gi|222859661|gb|EEE97208.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255554723|ref|XP_002518399.1| alkaline phytoceramidase, putative [Ricinus communis] gi|223542244|gb|EEF43786.1| alkaline phytoceramidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357480451|ref|XP_003610511.1| Alkaline ceramidase [Medicago truncatula] gi|355511566|gb|AES92708.1| Alkaline ceramidase [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query187
TAIR|locus:2132110255 ATCES1 "AT4G22330" [Arabidopsi 1.0 0.733 0.807 2.6e-86
UNIPROTKB|E1C413267 ACER3 "Uncharacterized protein 0.962 0.674 0.270 7.7e-13
MGI|MGI:1913440267 Acer3 "alkaline ceramidase 3" 0.951 0.666 0.268 7.1e-12
UNIPROTKB|A7MBH7267 ACER3 "ACER3 protein" [Bos tau 0.983 0.689 0.252 2.8e-11
UNIPROTKB|F5GYA0225 ACER3 "Alkaline ceramidase 3" 0.914 0.76 0.256 5.8e-11
UNIPROTKB|B7Z2Q2230 ACER3 "Alkaline ceramidase 3" 0.914 0.743 0.256 7.4e-11
RGD|1561254240 Acer3 "alkaline ceramidase 3" 0.951 0.741 0.257 1e-10
FB|FBgn0045064283 bwa "brain washing" [Drosophil 0.935 0.618 0.290 1e-10
UNIPROTKB|Q9NUN7267 ACER3 "Alkaline ceramidase 3" 0.914 0.640 0.256 1e-10
UNIPROTKB|E2RMS2267 ACER3 "Uncharacterized protein 0.941 0.659 0.257 2.3e-10
TAIR|locus:2132110 ATCES1 "AT4G22330" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
 Identities = 151/187 (80%), Positives = 165/187 (88%)

Query:     1 MILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYSPDWHYKSTMPTFLFLYGAAFA 60
             MILAIGSMLYHATLQH+QQQ DETPMVWE+LLY+YILYSPDWHY+STMPTFLFLYGAAFA
Sbjct:    69 MILAIGSMLYHATLQHVQQQSDETPMVWEILLYMYILYSPDWHYRSTMPTFLFLYGAAFA 128

Query:    61 VAHALFRFGIGFKVHYAVLCLLCIPRMYKYYIHTTDVPAKRLAKLYLATITVGSLCWLCD 120
             + HA  RFGIGFKVHY +LCLLCIPRMYKYYIHT D  AKR+AK Y+ATI VGS+CW CD
Sbjct:   129 IVHAYLRFGIGFKVHYVILCLLCIPRMYKYYIHTEDTAAKRIAKWYVATILVGSICWFCD 188

Query:   121 RLFCEKISLWYFNPQGHALWHTFMGFNSYFANTFLMFCRAQQRGWNPKVVHAMGWLPYVK 180
             R+FC+ IS W  NPQGHALWH FM FNSY ANTFLMFCRAQQRGWNPKV + +G LPYVK
Sbjct:   189 RVFCKTISQWPVNPQGHALWHVFMSFNSYCANTFLMFCRAQQRGWNPKVKYFLGVLPYVK 248

Query:   181 IDKPKVQ 187
             I+KPK Q
Sbjct:   249 IEKPKTQ 255




GO:0003824 "catalytic activity" evidence=ISS
GO:0006672 "ceramide metabolic process" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0016811 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides" evidence=IEA
GO:0016020 "membrane" evidence=ISS
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
UNIPROTKB|E1C413 ACER3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:1913440 Acer3 "alkaline ceramidase 3" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|A7MBH7 ACER3 "ACER3 protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F5GYA0 ACER3 "Alkaline ceramidase 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|B7Z2Q2 ACER3 "Alkaline ceramidase 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1561254 Acer3 "alkaline ceramidase 3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
FB|FBgn0045064 bwa "brain washing" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NUN7 ACER3 "Alkaline ceramidase 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2RMS2 ACER3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.1LOW CONFIDENCE prediction!
3rd Layer3.5.1.23LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
fgenesh4_pg.C_LG_I002447
hypothetical protein (254 aa)
(Populus trichocarpa)
Predicted Functional Partners:
eugene3.01240027
SubName- Full=Putative uncharacterized protein; (332 aa)
       0.900
fgenesh4_pg.C_LG_X001729
hypothetical protein (291 aa)
       0.899
eugene3.00110307
diacylglycerol kinase/D-erythro-sphingosine kinase (EC-2.7.1.91) (494 aa)
       0.899
estExt_fgenesh4_pm.C_LG_V0449
hypothetical protein (257 aa)
       0.899
estExt_fgenesh4_pg.C_LG_II0572
SubName- Full=Putative uncharacterized protein; (257 aa)
       0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query187
pfam05875264 pfam05875, Ceramidase, Ceramidase 3e-42
>gnl|CDD|218789 pfam05875, Ceramidase, Ceramidase Back     alignment and domain information
 Score =  142 bits (359), Expect = 3e-42
 Identities = 53/201 (26%), Positives = 81/201 (40%), Gaps = 20/201 (9%)

Query: 1   MILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYS----PDWHYKSTMPTFLFLYG 56
           +++ +GS L+H TL++  Q  DE PM++   + +Y  +          ++ +   LFL  
Sbjct: 64  ILVGLGSWLFHMTLKYHGQLLDELPMIYATCIPLYSWFPRRKFFFKRDRTVLAILLFLLA 123

Query: 57  AAFAVAHALFR----FGIGFKVHYAVLCLLCIPRMYKY-YIHTTDVPAKRLAKLYLATIT 111
           A   V + + +      + F +    + L  I  M +Y           RL KL +A   
Sbjct: 124 AIVTVLYFILKNPVIHQVAFGLLTIPVVLRSIYLMKRYVRDSVARKNLWRLMKLGVALFL 183

Query: 112 VGSLCWLCDRLFCEKIS--------LWYFNPQGHALWHTFMGFNSYFANTFLMFCRAQQR 163
           +G  CW  DR FC             W    + H  WH   G  +Y+   FL + RA   
Sbjct: 184 LGFFCWNLDRHFCSFWRRIRRPYGLPWGVLLELHGWWHILTGLGAYYYIVFLAYLRALLE 243

Query: 164 GWNPKVVH---AMGWLPYVKI 181
           G  PK        G LPYV I
Sbjct: 244 GPEPKFKLIWWPWGGLPYVVI 264


This family consists of several ceramidases. Ceramidases are enzymes involved in regulating cellular levels of ceramides, sphingoid bases, and their phosphates, EC:3.5.1.23. Length = 264

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 187
PF05875262 Ceramidase: Ceramidase; InterPro: IPR008901 This e 100.0
KOG2329276 consensus Alkaline ceramidase [Lipid transport and 100.0
PRK15087219 hemolysin; Provisional 97.06
TIGR01065204 hlyIII channel protein, hemolysin III family. This 96.09
PF03006222 HlyIII: Haemolysin-III related; InterPro: IPR00425 95.78
PF12036186 DUF3522: Protein of unknown function (DUF3522); In 92.93
COG1272226 Predicted membrane protein, hemolysin III homolog 92.02
PF0825514 Leader_Trp: Trp-operon Leader Peptide; InterPro: I 90.23
PF04080267 Per1: Per1-like ; InterPro: IPR007217 A member of 82.99
>PF05875 Ceramidase: Ceramidase; InterPro: IPR008901 This entry consists of several ceramidases Back     alignment and domain information
Probab=100.00  E-value=6.9e-46  Score=314.90  Aligned_cols=180  Identities=33%  Similarity=0.569  Sum_probs=157.9

Q ss_pred             CeeehhHHHHHHhhhhhhhhhcchhHHHHHHHHHHHHhccCc---cccchhHHHHHHHhhHhheeeeccccchhHHHHHH
Q 029833            1 MILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYSPDW---HYKSTMPTFLFLYGAAFAVAHALFRFGIGFKVHYA   77 (187)
Q Consensus         1 ~~VGiGS~~FHaTL~~~~QllDElpMl~~~~~~~y~~~~~~~---~~~~~l~~~l~~~~~~~t~~~~~~~~~~~h~v~f~   77 (187)
                      ++||+||++|||||++++|++||+||+|++++++|.++..+.   ..+..++..+..+++++++.+...++|..||++|+
T Consensus        64 ~~VGiGS~~FHaTl~~~~ql~DelPMl~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~t~~~~~~~~p~~~~~~f~  143 (262)
T PF05875_consen   64 ALVGIGSFLFHATLSYWTQLLDELPMLWATLLFLYIVLTRRYSSPRYRLALPLLLFIYAVVVTVLYFVLDNPVFHQIAFA  143 (262)
T ss_pred             HHHHHhHHHHHhChhhhHHHhhhhhHHHHHHHHHHHHhcccccCchhhHHHHHHHHHHHHHHHHHHhhhccchhhhhhHH
Confidence            368999999999999999999999999999999999987644   34556778888888899999999999999999999


Q ss_pred             HHHHHHHhhhhhhhhc-----cCChhHHHHHHHHHHHHHHHHHHHhhhhhhhcchhhhc--------ccchhhhHHHHHH
Q 029833           78 VLCLLCIPRMYKYYIH-----TTDVPAKRLAKLYLATITVGSLCWLCDRLFCEKISLWY--------FNPQGHALWHTFM  144 (187)
Q Consensus        78 ~l~~~~~~~~~~~~~~-----~~~~~~~~l~~~~~~~f~~g~~~W~~D~~~C~~l~~~~--------~~~elH~wWHilt  144 (187)
                      .+.+.++.++.....+     .++++.+|+.+.|+++|++|+++|++||.+|+.++.+|        +++|+||||||+|
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~f~~a~~~W~iD~~~C~~~~~~~~~~g~p~~~~le~H~~WHilt  223 (262)
T PF05875_consen  144 SLVLLVILRSIYLIRRRVRDACRRRRARRLLLFGLALFLVAFFFWNIDRIFCSSLRAIRFPYGLPLGFLLELHAWWHILT  223 (262)
T ss_pred             HHHHHHHHHHHHHHHHhcCchhhchHHHHHHHHHHHHHHHHHHHHHhHHHHHccccccccccCCcchhHHhHHHHHHHHH
Confidence            9999999998765444     45667889999999999999999999999999999876        4689999999999


Q ss_pred             HhHHHHHHHHHHHHHhhcc--CCcceeee-eeccceEEE
Q 029833          145 GFNSYFANTFLMFCRAQQR--GWNPKVVH-AMGWLPYVK  180 (187)
Q Consensus       145 gig~Y~~~~~~~~~~~~~~--~~~~~~~~-~~g~~P~v~  180 (187)
                      |+|+|+.+++.+|+|..++  +.+++++| ..+.+|||+
T Consensus       224 ~ig~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~v~  262 (262)
T PF05875_consen  224 GIGAYLLIVFVAYLRALYEGPEPKPKLKWPPWGGLPYVK  262 (262)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCCceeC
Confidence            9999999999999997766  55677777 456669985



Ceramidases are enzymes involved in regulating cellular levels of ceramides, sphingoid bases, and their phosphates.; GO: 0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides, 0006672 ceramide metabolic process, 0016021 integral to membrane

>KOG2329 consensus Alkaline ceramidase [Lipid transport and metabolism] Back     alignment and domain information
>PRK15087 hemolysin; Provisional Back     alignment and domain information
>TIGR01065 hlyIII channel protein, hemolysin III family Back     alignment and domain information
>PF03006 HlyIII: Haemolysin-III related; InterPro: IPR004254 Members of this family are integral membrane proteins Back     alignment and domain information
>PF12036 DUF3522: Protein of unknown function (DUF3522); InterPro: IPR021910 This family of proteins is functionally uncharacterised Back     alignment and domain information
>COG1272 Predicted membrane protein, hemolysin III homolog [General function prediction only] Back     alignment and domain information
>PF08255 Leader_Trp: Trp-operon Leader Peptide; InterPro: IPR013205 The tryptophan operon regulatory region of Citrobacter freundii (leader transcript) encodes a 14-residue peptide containing characteristic tandem tryptophan residues Back     alignment and domain information
>PF04080 Per1: Per1-like ; InterPro: IPR007217 A member of this family has been implemented in protein processing in the endoplasmic reticulum [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00