Citrus Sinensis ID: 029892

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180------
Protein Sequence
MGISLNPNSQSLNGSHHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLHILTIAGAISGCAAASSDSSRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVREEDGVVILKLAGGLCVLIFCLEWVVLTLAFFLKYYAYVEGGNGTPAVRRSAKVSQEEDLKDWPWPFQV
Secondary Structure (PSIPRED)
ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHccccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHEHEEcccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEcccEEccccccccccccccc
Coil and Loop (DISEMBL)
mgislnpnsqslngshhhthKVFLYCNYILLGAASSCIFLTLSlrllpsvcGFFFILLHILTIAGAISgcaaassdssrwyGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVREEDGVVILKLAGGLCVLIFCLEWVVLTLAFFLKYYAYveggngtpavrrsakvsqeedlkdwpwpfqv
Flexible Loop (DISEMBL)
MGISLNPNSQSLNGSHHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLHILTIAGAISGCAAASSDSSRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVREEDGVVILKLAGGLCVLIFCLEWVVLTLAFFLKYYAYVEGGNGTPAVRRSAKvsqeedlkdwpwpfqv
Low Complexity Region (SEG)
MGISLNPNSQSLNGSHHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLHILTiagaisgcaaassdssRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVREEDGVVILKLAGGLCVLIFCLEWVVLTLAFFLKYYAYVEGGNGTPAVRRSAKVSQEEDLKDWPWPFQV
Disordered region (IsUnstruct)
*****************HTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLHILTIAGAISGCAAASSDSSRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVREEDGVVILKLAGGLCVLIFCLEWVVLTLAFFLKYYAYVEGGN**************************
Disordered Region (DISOPRED)
*******************HKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLHILTIAGAISGCAAASSDSSRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLK**VREEDGVVILKLAGGLCVLIFCLEWVVLTLAFFLKYYAYVEG*********************WPWPFQV
Disordered Region (DISEMBL)
**************SHHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLHILTIAGAISG********SRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVREEDGVVILKLAGGLCVLIFCLEWVVLTLAFFLKYYAYVEGGNGT***************KDWPWPFQV
Disordered Region (DISPRO)
***************HHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLHILTIAGAISGCAAASSDSSRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVREEDGVVILKLAGGLCVLIFCLEWVVLTLAFFLKYYAYVEGGNGTPAVRRSAKVSQEEDLKDWPWPFQV
Transmembrane Helix (TMHMM)
oooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGISLNPNSQSLNGSHHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLHILTIAGAISGCAAASSDSSRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVREEDGVVILKLAGGLCVLIFCLEWVVLTLAFFLKYYAYVEGGNGTPAVRRSAKVSQEEDLKDWPWPFQV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	186
255547444	190	conserved hypothetical protein [Ricinus	0.989	0.968	0.841	5e-86
317106645	189	JHL23J11.5 [Jatropha curcas]	0.989	0.973	0.829	8e-86
225467749	189	PREDICTED: uncharacterized protein LOC10	1.0	0.984	0.804	1e-83
224109182	191	predicted protein [Populus trichocarpa]	0.989	0.963	0.802	9e-83
224101255	191	predicted protein [Populus trichocarpa]	0.989	0.963	0.796	6e-81
217075865	185	unknown [Medicago truncatula]	0.989	0.994	0.764	5e-76
388497550	185	unknown [Medicago truncatula]	0.989	0.994	0.764	6e-76
357507865	316	hypothetical protein MTR_7g080550 [Medic	0.989	0.582	0.764	4e-75
351724021	188	uncharacterized protein LOC100527525 [Gl	0.956	0.946	0.779	3e-74
449461074	188	PREDICTED: uncharacterized protein LOC10	1.0	0.989	0.734	6e-74

>gi|255547444|ref|XP_002514779.1| conserved hypothetical protein [Ricinus communis] gi|223545830|gb|EEF47333.1| conserved hypothetical protein [Ricinus communis]

 Score =  322 bits (824), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 159/189 (84%), Positives = 171/189 (90%), Gaps = 5/189 (2%)

Query: 2   GISLNPNSQSLNGSHHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLHIL 61
           GI+L  N QS++ SHHHTHKVFL+CNYILLGAASSCIFLTLSLRLLPS+CGFF ILLHIL
Sbjct: 3   GITLG-NPQSVSQSHHHTHKVFLFCNYILLGAASSCIFLTLSLRLLPSICGFFLILLHIL 61

Query: 62  TIAGAISGCAAASSDSSRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVREED 121
           TIAGA+SGCAAASS ++RWY AHMVATVLTAIFQGSVSVL+FTRT DFLG+LKSYVREED
Sbjct: 62  TIAGAVSGCAAASSGTNRWYAAHMVATVLTAIFQGSVSVLIFTRTGDFLGQLKSYVREED 121

Query: 122 GVVILKLAGGLCVLIFCLEWVVLTLAFFLKYYAYVEG----GNGTPAVRRSAKVSQEEDL 177
           G VILKLAGGLCV+IFCLEWVVLTLAFFLKYYAYVEG    G G   +RRSAKV QEEDL
Sbjct: 122 GEVILKLAGGLCVVIFCLEWVVLTLAFFLKYYAYVEGDVSSGGGNIGMRRSAKVQQEEDL 181

Query: 178 KDWPWPFQV 186
           KDWPWPFQV
Sbjct: 182 KDWPWPFQV 190

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|317106645|dbj|BAJ53150.1| JHL23J11.5 [Jatropha curcas]

 Score =  321 bits (823), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 156/188 (82%), Positives = 172/188 (91%), Gaps = 4/188 (2%)

Query: 2   GISLNPNSQSLNGSHHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLHIL 61
           GI+L  N+ S++ SHHHTHKVFL+CNYILLGAASSCIFLTLSLRL+PS+CGFF ILLH+L
Sbjct: 3   GITLG-NTHSISQSHHHTHKVFLFCNYILLGAASSCIFLTLSLRLVPSICGFFLILLHVL 61

Query: 62  TIAGAISGCAAASSDSSRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVREED 121
           TI GA+SGCAAASS ++RWY AHMVATVLTAIFQGSVSVL+FTRT DFLG+LKSYVREED
Sbjct: 62  TIIGAVSGCAAASSGTNRWYAAHMVATVLTAIFQGSVSVLIFTRTGDFLGQLKSYVREED 121

Query: 122 GVVILKLAGGLCVLIFCLEWVVLTLAFFLKYYAYVEGGN---GTPAVRRSAKVSQEEDLK 178
           G VILKLAGGLCVL+FCLEWVVLTLAFFLKYYAYVEGG+   G  A+RRSAKV QEEDLK
Sbjct: 122 GEVILKLAGGLCVLVFCLEWVVLTLAFFLKYYAYVEGGDVSGGNTAMRRSAKVQQEEDLK 181

Query: 179 DWPWPFQV 186
           DWPWPFQV
Sbjct: 182 DWPWPFQV 189

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225467749|ref|XP_002265070.1| PREDICTED: uncharacterized protein LOC100267455 [Vitis vinifera] gi|296080863|emb|CBI18793.3| unnamed protein product [Vitis vinifera]

 Score =  313 bits (803), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 152/189 (80%), Positives = 168/189 (88%), Gaps = 3/189 (1%)

Query: 1   MGISLNPNSQSLNGSHHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLHI 60
           MG+S++  S S+  SH+HTHKVFL+CNYILLGAASSCIFLTLSLRLLPSVCGFF ILLHI
Sbjct: 1   MGLSIHNQSSSVTESHYHTHKVFLFCNYILLGAASSCIFLTLSLRLLPSVCGFFLILLHI 60

Query: 61  LTIAGAISGCAAASSDSSRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVREE 120
           LTI GA+SGCAAAS+ +SRWY AHMV TVLTAIFQGSVSVL+FTRTSDFLG LKSYVREE
Sbjct: 61  LTITGAVSGCAAASTGTSRWYAAHMVTTVLTAIFQGSVSVLIFTRTSDFLGDLKSYVREE 120

Query: 121 DGVVILKLAGGLCVLIFCLEWVVLTLAFFLKYYAYVEG---GNGTPAVRRSAKVSQEEDL 177
           DG VILKLAGGL +LIFCLEWVV+ LAFFLKYYAYVEG   G+   A+++SAKV QEEDL
Sbjct: 121 DGAVILKLAGGLSILIFCLEWVVMILAFFLKYYAYVEGDGCGSSGSAMKKSAKVQQEEDL 180

Query: 178 KDWPWPFQV 186
           KDWPWPFQV
Sbjct: 181 KDWPWPFQV 189

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109182|ref|XP_002315113.1| predicted protein [Populus trichocarpa] gi|222864153|gb|EEF01284.1| predicted protein [Populus trichocarpa]

 Score =  311 bits (796), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 150/187 (80%), Positives = 167/187 (89%), Gaps = 3/187 (1%)

Query: 3   ISLNPNSQSLNGSHHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLHILT 62
           I+L   + S++ SH+HTH+VFL+CNYILLGAASSCIFLTLSLRL+PS+CGFF ILLH+ T
Sbjct: 5   ITLGSTNSSVSQSHYHTHRVFLFCNYILLGAASSCIFLTLSLRLVPSICGFFLILLHVFT 64

Query: 63  IAGAISGCAAASSDSSRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVREEDG 122
           IAGA+SGCAAASS ++RWY AHMVATVLTAIFQGSVSVL+FTRT DFLG LKSYVREEDG
Sbjct: 65  IAGAVSGCAAASSGTNRWYAAHMVATVLTAIFQGSVSVLIFTRTGDFLGNLKSYVREEDG 124

Query: 123 VVILKLAGGLCVLIFCLEWVVLTLAFFLKYYAYVEG---GNGTPAVRRSAKVSQEEDLKD 179
            VILKLAGGLCV+IFCLEWVVLTLAFFLKYYAYVEG     G  A+RRSAKV Q+EDLKD
Sbjct: 125 DVILKLAGGLCVVIFCLEWVVLTLAFFLKYYAYVEGDANNGGDIAMRRSAKVQQDEDLKD 184

Query: 180 WPWPFQV 186
           WPWPFQV
Sbjct: 185 WPWPFQV 191

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224101255|ref|XP_002312204.1| predicted protein [Populus trichocarpa] gi|118483634|gb|ABK93711.1| unknown [Populus trichocarpa] gi|222852024|gb|EEE89571.1| predicted protein [Populus trichocarpa]

 Score =  305 bits (781), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 149/187 (79%), Positives = 164/187 (87%), Gaps = 3/187 (1%)

Query: 3   ISLNPNSQSLNGSHHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLHILT 62
           I+L   + S++ SH+HTHKVFL+CNYILLGAASSCIFLTLSLRL+PSVCGFF ILLH+ T
Sbjct: 5   ITLGGANSSVSQSHYHTHKVFLFCNYILLGAASSCIFLTLSLRLVPSVCGFFLILLHVFT 64

Query: 63  IAGAISGCAAASSDSSRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVREEDG 122
           I GA+SGCAAASS +++WY AHMVATVLTAIFQGSVSVL+FTRT  FLG LKSYVREEDG
Sbjct: 65  IVGAVSGCAAASSGTNKWYAAHMVATVLTAIFQGSVSVLIFTRTGGFLGNLKSYVREEDG 124

Query: 123 VVILKLAGGLCVLIFCLEWVVLTLAFFLKYYAYVEG---GNGTPAVRRSAKVSQEEDLKD 179
            VILKLAGGLCV+IFCLEWVVLTLAFFLKYYAYVEG     G  A RRSAKV Q+EDLKD
Sbjct: 125 EVILKLAGGLCVVIFCLEWVVLTLAFFLKYYAYVEGDANDGGNIATRRSAKVQQDEDLKD 184

Query: 180 WPWPFQV 186
           WPWPFQV
Sbjct: 185 WPWPFQV 191

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217075865|gb|ACJ86292.1| unknown [Medicago truncatula]

 Score =  288 bits (738), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 143/187 (76%), Positives = 161/187 (86%), Gaps = 3/187 (1%)

Query: 1   MGISLNPNSQSLNGSHHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLHI 60
           MG+S+N    ++   H++ HK+FL+CNY+LLGAASSCIFLTLSLRL+PSVCGFF ILLHI
Sbjct: 1   MGLSMNDPPATITPRHYNIHKLFLFCNYVLLGAASSCIFLTLSLRLVPSVCGFFLILLHI 60

Query: 61  LTIAGAISGCAAASSDSSRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVREE 120
            TIAGA+SGCAA  ++  RWY AHMVATVLTAIFQGSVSVLVFTRTSDFLG+L+SYVREE
Sbjct: 61  FTIAGAVSGCAAVGAN--RWYSAHMVATVLTAIFQGSVSVLVFTRTSDFLGELQSYVREE 118

Query: 121 DGVVILKLAGGLCVLIFCLEWVVLTLAFFLKYYAYVEGGNG-TPAVRRSAKVSQEEDLKD 179
           DG VILKL+GGL +LIFCLEWVVLTLAFFLKYYA VEGGN     V  SAKV Q+EDLKD
Sbjct: 119 DGSVILKLSGGLAILIFCLEWVVLTLAFFLKYYACVEGGNTCRTVVLGSAKVQQDEDLKD 178

Query: 180 WPWPFQV 186
           WPWPFQV
Sbjct: 179 WPWPFQV 185

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388497550|gb|AFK36841.1| unknown [Medicago truncatula]

 Score =  288 bits (737), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 143/187 (76%), Positives = 161/187 (86%), Gaps = 3/187 (1%)

Query: 1   MGISLNPNSQSLNGSHHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLHI 60
           MG+S+N    ++   H++ HK+FL+CNY+LLGAASSCIFLTLSLRL+PSVCGFF ILLHI
Sbjct: 1   MGLSMNNPPATITPRHYNIHKLFLFCNYVLLGAASSCIFLTLSLRLVPSVCGFFLILLHI 60

Query: 61  LTIAGAISGCAAASSDSSRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVREE 120
            TIAGA+SGCAA  ++  RWY AHMVATVLTAIFQGSVSVLVFTRTSDFLG+L+SYVREE
Sbjct: 61  FTIAGAVSGCAAVGAN--RWYSAHMVATVLTAIFQGSVSVLVFTRTSDFLGELQSYVREE 118

Query: 121 DGVVILKLAGGLCVLIFCLEWVVLTLAFFLKYYAYVEGGNG-TPAVRRSAKVSQEEDLKD 179
           DG VILKL+GGL +LIFCLEWVVLTLAFFLKYYA VEGGN     V  SAKV Q+EDLKD
Sbjct: 119 DGSVILKLSGGLAILIFCLEWVVLTLAFFLKYYACVEGGNTCRTVVLGSAKVQQDEDLKD 178

Query: 180 WPWPFQV 186
           WPWPFQV
Sbjct: 179 WPWPFQV 185

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357507865|ref|XP_003624221.1| hypothetical protein MTR_7g080550 [Medicago truncatula] gi|355499236|gb|AES80439.1| hypothetical protein MTR_7g080550 [Medicago truncatula]

 Score =  285 bits (730), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 143/187 (76%), Positives = 161/187 (86%), Gaps = 3/187 (1%)

Query: 1   MGISLNPNSQSLNGSHHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLHI 60
           MG+S+N    ++   H++ HK+FL+CNY+LLGAASSCIFLTLSLRL+PSVCGFF ILLHI
Sbjct: 1   MGLSMNNPPATITPRHYNIHKLFLFCNYVLLGAASSCIFLTLSLRLVPSVCGFFLILLHI 60

Query: 61  LTIAGAISGCAAASSDSSRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVREE 120
            TIAGA+SGCAA  ++  RWY AHMVATVLTAIFQGSVSVLVFTRTSDFLG+L+SYVREE
Sbjct: 61  FTIAGAVSGCAAVGAN--RWYSAHMVATVLTAIFQGSVSVLVFTRTSDFLGELQSYVREE 118

Query: 121 DGVVILKLAGGLCVLIFCLEWVVLTLAFFLKYYAYVEGGNG-TPAVRRSAKVSQEEDLKD 179
           DG VILKL+GGL +LIFCLEWVVLTLAFFLKYYA VEGGN     V  SAKV Q+EDLKD
Sbjct: 119 DGSVILKLSGGLAILIFCLEWVVLTLAFFLKYYACVEGGNTCRTVVLGSAKVQQDEDLKD 178

Query: 180 WPWPFQV 186
           WPWPFQV
Sbjct: 179 WPWPFQV 185

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724021|ref|NP_001237299.1| uncharacterized protein LOC100527525 [Glycine max] gi|255632542|gb|ACU16621.1| unknown [Glycine max]

 Score =  283 bits (723), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 141/181 (77%), Positives = 155/181 (85%), Gaps = 3/181 (1%)

Query: 6   NPNSQSLNGSHHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLHILTIAG 65
           N NS S+   H++THKVFL+CNYILLGAASSCIFLTLSLRL+PS+CG FFIL  + TIAG
Sbjct: 11  NHNS-SITPRHYNTHKVFLFCNYILLGAASSCIFLTLSLRLIPSLCGSFFILRQVFTIAG 69

Query: 66  AISGCAAASSDSSRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVREEDGVVI 125
           A+SGCAA  ++  RWY AHMVATVLTAIFQGSVSVLVFTRT DFLG+LKSYVREEDG VI
Sbjct: 70  AVSGCAAVGTN--RWYSAHMVATVLTAIFQGSVSVLVFTRTGDFLGQLKSYVREEDGAVI 127

Query: 126 LKLAGGLCVLIFCLEWVVLTLAFFLKYYAYVEGGNGTPAVRRSAKVSQEEDLKDWPWPFQ 185
           LKLAGGL +LIFCLEWVVLTLAFFLKYYA VEG +G     RS KV Q+EDLKDWPWPFQ
Sbjct: 128 LKLAGGLTILIFCLEWVVLTLAFFLKYYACVEGNSGAVVPVRSGKVQQDEDLKDWPWPFQ 187

Query: 186 V 186
           V
Sbjct: 188 V 188

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461074|ref|XP_004148268.1| PREDICTED: uncharacterized protein LOC101206234 [Cucumis sativus]

 Score =  282 bits (721), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 138/188 (73%), Positives = 157/188 (83%), Gaps = 2/188 (1%)

Query: 1   MGISLNPN-SQSLNGSHHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLH 59
           MG S+    S S+  SH+HTHK+FLY NYILLGAASSCIFLTLSLRLLPS+CG   I LH
Sbjct: 1   MGFSITSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60

Query: 60  ILTIAGAISGCAAASSDSSRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVRE 119
           ILTIA A+SGCA A++ S+RW+G HMV TVLTAIFQGSV++LV+TRT DFL +LKSYVRE
Sbjct: 61  ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVRE 120

Query: 120 EDGVVILKLAGGLCVLIFCLEWVVLTLAFFLKYYAYV-EGGNGTPAVRRSAKVSQEEDLK 178
           EDG VILKLAGGL V++F LEWVVLTLAFFL+YYA+V EG N   A  RSAKV Q+EDLK
Sbjct: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAMRSAKVQQDEDLK 180

Query: 179 DWPWPFQV 186
           DWPWPFQV
Sbjct: 181 DWPWPFQV 188

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	186
TAIR|locus:2181447	183	AT5G16250 "AT5G16250" [Arabido	0.956	0.972	0.675	6e-64
TAIR|locus:2076849	185	AT3G02640 "AT3G02640" [Arabido	0.994	1.0	0.629	8.1e-60
TAIR|locus:2147376	183	AT5G36710 "AT5G36710" [Arabido	0.913	0.928	0.586	3.7e-48
TAIR|locus:2832155	183	AT5G36800 "AT5G36800" [Arabido	0.913	0.928	0.586	3.7e-48

TAIR|locus:2181447 AT5G16250 "AT5G16250" [Arabidopsis thaliana (taxid:3702)]

 Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
 Identities = 121/179 (67%), Positives = 139/179 (77%)

Query:     8 NSQSLNGSHHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLHILTXXXXX 67
             +S  +  SH+HTHK+FL+ NYILLGAASSCIFLTLSLRL+PS+CGF  ILLH  T     
Sbjct:     6 SSSPVEESHYHTHKIFLFSNYILLGAASSCIFLTLSLRLIPSICGFLLILLHATTIAAAV 65

Query:    68 XXXXXXXXXXXRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVREEDGVVILK 127
                        RWY AHMVATVLTAIFQGSVSVL+FT TS FLG LKSYVREED  VILK
Sbjct:    66 SGCAAASCGRNRWYAAHMVATVLTAIFQGSVSVLIFTNTSKFLGSLKSYVREEDAAVILK 125

Query:   128 LAGGLCVLIFCLEWVVLTLAFFLKYYAYVEGGNGTPAVRRSAKVSQEEDLKDWPWPFQV 186
             L GGLC++IFCL+W+VL  AFFLKYYAYV+GG+G  A++R+ KV  EE+ KDWPWPFQV
Sbjct:   126 LGGGLCIVIFCLDWIVLVCAFFLKYYAYVDGGDGV-AMKRTGKVQSEENPKDWPWPFQV 183

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2076849 AT3G02640 "AT3G02640" [Arabidopsis thaliana (taxid:3702)]

 Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
 Identities = 117/186 (62%), Positives = 140/186 (75%)

Query:     1 MGISLNPNSQSLNGSHHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLHI 60
             MG+   P  +S+  SH++THK+FL  NY+LLGA+SSCIFLTLSLRL+PS+CGFF ILLH 
Sbjct:     1 MGLIPQPQ-ESIQESHYYTHKLFLTANYVLLGASSSCIFLTLSLRLIPSLCGFFLILLHA 59

Query:    61 LTXXXXXXXXXXXXXXXXRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVREE 120
              T                RWY AHM+ATVLTAIFQGSVSVL+FT TS+FL  L SYVRE+
Sbjct:    60 TTIAAAVSGCAAASYGKNRWYAAHMIATVLTAIFQGSVSVLIFTNTSNFLESLNSYVREK 119

Query:   121 DGVVILKLAGGLCVLIFCLEWVVLTLAFFLKYYAYVEGGNGTPAVRRSAKVSQEEDLKDW 180
             +  +ILKLAGGLCV+IFCLEW+VL LAFFLKYYAYV+G N   A++R+ KV  EE LK+ 
Sbjct:   120 EASMILKLAGGLCVVIFCLEWIVLVLAFFLKYYAYVDGDNNGVAMKRTGKVQSEETLKNS 179

Query:   181 PWPFQV 186
             PW FQV
Sbjct:   180 PWAFQV 185

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016572 "histone phosphorylation" evidence=RCA

TAIR|locus:2147376 AT5G36710 "AT5G36710" [Arabidopsis thaliana (taxid:3702)]

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 108/184 (58%), Positives = 127/184 (69%)

Query:    12 LNGSHHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLHILTXXXXXX--- 68
             ++ S  +TH +FL CNYILLG+ASSCIFLT+SLRL PS+ G   I L+ LT         
Sbjct:     3 MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query:    69 --XXXXXXXXXXRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVREEDGVVIL 126
                         R YG+HMVATVLTAIFQG+VSVL+FTRT DFL  LKSYVREEDG VIL
Sbjct:    63 IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query:   127 KLAGGLCVLIFCLEWVVLTLAFFLKYYAYVEGG---NGTPAVRRSAKVSQEEDLKDWP-W 182
             KL+GGLCVL+FCLEW+VL LAF LKY  Y++     +    VRR     QEEDLKDWP +
Sbjct:   123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDDDFKVRR-----QEEDLKDWPSY 177

Query:   183 PFQV 186
             PFQ+
Sbjct:   178 PFQL 181

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2832155 AT5G36800 "AT5G36800" [Arabidopsis thaliana (taxid:3702)]

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 108/184 (58%), Positives = 127/184 (69%)

Query:    12 LNGSHHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLHILTXXXXXX--- 68
             ++ S  +TH +FL CNYILLG+ASSCIFLT+SLRL PS+ G   I L+ LT         
Sbjct:     3 MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query:    69 --XXXXXXXXXXRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVREEDGVVIL 126
                         R YG+HMVATVLTAIFQG+VSVL+FTRT DFL  LKSYVREEDG VIL
Sbjct:    63 IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query:   127 KLAGGLCVLIFCLEWVVLTLAFFLKYYAYVEGG---NGTPAVRRSAKVSQEEDLKDWP-W 182
             KL+GGLCVL+FCLEW+VL LAF LKY  Y++     +    VRR     QEEDLKDWP +
Sbjct:   123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDDDFKVRR-----QEEDLKDWPSY 177

Query:   183 PFQV 186
             PFQ+
Sbjct:   178 PFQL 181


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.328   0.142   0.453    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      186       170   0.00086  108 3  11 22  0.44    31
                                                     31  0.47    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  160 KB (2094 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.96u 0.12s 15.08t   Elapsed:  00:00:01
  Total cpu time:  14.96u 0.12s 15.08t   Elapsed:  00:00:01
  Start:  Thu May  9 23:33:26 2013   End:  Thu May  9 23:33:27 2013

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	186
PF00335	221	Tetraspannin: Tetraspanin family RDS_ROM1 subfamil	96.93
KOG3882	237	consensus Tetraspanin family integral membrane pro	96.66

>PF00335 Tetraspannin: Tetraspanin family RDS_ROM1 subfamily; InterPro: IPR018499 A number of eukaryotic CD antigens have been shown to be related []

Probab=96.93  E-value=0.00027  Score=53.52  Aligned_cols=95  Identities=16%  Similarity=0.228  Sum_probs=6.4

Q ss_pred             hHHHHHHHHHHHhhhhhHHHHHHhhc-----------cCcchhHHHHHHHHHHHHHHhhhcccccccCCCchHHHHHHHH
Q 029892           20 HKVFLYCNYILLGAASSCIFLTLSLR-----------LLPSVCGFFFILLHILTIAGAISGCAAASSDSSRWYGAHMVAT   88 (186)
Q Consensus        20 ~k~fl~lNyiLL~~assci~ltlsLR-----------l~PS~~G~~lIll~~~Ti~sa~~Gcss~~s~t~~cf~aHmv~t   88 (186)
                      +.++.+.|.+.++.+...+...+.++           ..++..++.++.++++.++.++.||.+....++..-..+.+++
T Consensus         3 k~~l~~~n~l~~l~g~~li~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~G~~~~~~~~~G~~~~~~~~~~~l~~y~~~~   82 (221)
T PF00335_consen    3 KYILFFLNVLFLLLGLALIGVGIWLLVNNQYLSEFSSSFISYVIIILIFIGIFILIISFLGCIGACRKNRCLLIIYIILL   82 (221)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccccch
Confidence            56778899999998888777777772           2345667788879999998999999876434456678899999


Q ss_pred             HHHHHHHhHhhhheeecchhhhhhcc
Q 029892           89 VLTAIFQGSVSVLVFTRTSDFLGKLK  114 (186)
Q Consensus        89 vlsaIgQga~slliFtrt~~~L~~LK  114 (186)
                      ++..+.|..++...+...++..+.++
T Consensus        83 ~~~~v~~~~~~i~~~~~~~~~~~~~~  108 (221)
T PF00335_consen   83 ILLFVLELVVGIVAFSYRDQLNSSLK  108 (221)
T ss_dssp             -----------------HHHHHHHHH
T ss_pred             hhHHHHHHHHHHhhhhcccccccccc
Confidence            99999999999999998888777664

CD9 (also called DRAP-27, MRP-1 or p24) upregulates HB-EGF activity as a receptor for diphtheria toxin as well as its juxtacrine activity. CD9 mAbs modulate cell adhesion and migration and trigger platelet activation that is blocked by mAbs directed to the platelet Fc receptor CD32. In mice, CD9 mAb KMC8.8 has been shown to inhibit the production of myeloid cells in vitro and has a costimulatory activity for T cells. CD9 is a type III membrane protein, with four putative transmembrane domains. CD37 (or gp52-40) is involved in signal transduction and serves as a stable marker for malignancies derived from mature B cells, like B-CLL, HCL, and all types of B-NHL. CD63 transfection reduced melanoma cell motility on fibronectin, collagen and laminin, and reduced the growth and metastasis of melanoma cells in nude mice []. CD63 has been used as a marker for late endosomes and for primary melanomas. These proteins are all type II membrane proteins: they contain an N-terminal transmembrane (TM) domain, which acts both as a signal sequence and a membrane anchor, and 3 additional TM regions (hence the name 'TM4'). The sequences contain a number of conserved cysteine residues. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0016021 integral to membrane; PDB: 1IV5_A 1G8Q_A.

>KOG3882 consensus Tetraspanin family integral membrane protein [General function prediction only]

Probab=96.66  E-value=0.0054  Score=50.47  Aligned_cols=96  Identities=15%  Similarity=0.149  Sum_probs=77.6

Q ss_pred             hhhHHHHHHHHHHHhhhhhHHHHHHhhccCcc-----------hhHHHHHHHHHHHHHHhhhcccccccCCCch-HHHHH
Q 029892           18 HTHKVFLYCNYILLGAASSCIFLTLSLRLLPS-----------VCGFFFILLHILTIAGAISGCAAASSDSSRW-YGAHM   85 (186)
Q Consensus        18 ~t~k~fl~lNyiLL~~assci~ltlsLRl~PS-----------~~G~~lIll~~~Ti~sa~~Gcss~~s~t~~c-f~aHm   85 (186)
                      -.+.++...|++....+..-+...+-++..++           ...+.+|.++++..+-++.||.++- -.++| ...-.
T Consensus         8 ~~K~~lf~~N~~~~l~G~~ll~~giw~~~~~~~~~~~~~~~~~~~~~ili~~G~v~~~v~flGc~Ga~-~es~~lL~~y~   86 (237)
T KOG3882|consen    8 CLKYLLFLLNLLFWLLGLLLLAVGIWLLADKGFLSSLLESDFLVPAYILIAVGGVVFLVGFLGCCGAL-RESRCLLLSYF   86 (237)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhheeEeccchhhccccchhcchhhhhhhhHHHHHHHHhhhhhhH-hhhHHHHHHHH
Confidence            45667888999999999999999998887765           5788999999999999999988763 33455 56778


Q ss_pred             HHHHHHHHHHhHhhhheeecchhhhhhcc
Q 029892           86 VATVLTAIFQGSVSVLVFTRTSDFLGKLK  114 (186)
Q Consensus        86 v~tvlsaIgQga~slliFtrt~~~L~~LK  114 (186)
                      +..++-.+.|.++..+.|...+++.+.++
T Consensus        87 ~~l~l~~i~e~~~~i~~~~~~~~l~~~~~  115 (237)
T KOG3882|consen   87 ILLLLLFIAELAAGILAFVFRDSLRDELE  115 (237)
T ss_pred             HHHHHHHHHHHHHHHHhheeHHHHHHHHH
Confidence            88889999999999999966655554443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00