Citrus Sinensis ID: 030378

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
Protein Sequence
MALSPLITALLFALALSASFELSTCHEVLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMATTQVSGSFKVNLPSDAAMKTPSPLHCHAKLFGGPVQLYASKKNMVSKVMKPKNSNSYKISTPLAFSISCPSNVKDSKCGAANKFGSSKTVDLPLPPEWGLAPSSYYVPFVPIIGIP
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHccccccccEEEEEEEEEEccccccccccccEEEEEccccccEEEEEEcccccEEEEcccccccccccccccEEEEcccccccccccccEEEEEEEcccccEEEEEccEEEEEEccccccccccccccccccccccccccccccccccccccccccEEcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHccccccHHHHHEccEEEEEccccccccccEEEEEEEccccEEEEEEEcccccEEEEccccccccccccHHHHHHEccccHHccccccccEEEEEEEccccEEEEEcccEEEEccccccccccccccccccccccccccccccccccccEEEEccccEEccc
Coil and Loop (DISEMBL)
MALSPLITALLFALALSASFELSTChevlkgkvscsdcsndydlsgvKVLVKCNHLKKLAMATtqvsgsfkvnlpsdaamktpsplhchaklfggpvqlyaSKKNMVSkvmkpknsnsykistplafsiscpsnvkdskcgaankfgssktvdlplppewglapssyyvpfvpiigip
Flexible Loop (DISEMBL)
MALSPLITALLFALALSASFELSTCHEVLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMATTQVSGSFKVNLPSDAAMKTPSPLHCHAKLFGGPVQLYASKKNMVSKVmkpknsnsykiSTPLAFSISCPSNVKDSKCGAANKFGSSKTVDLPLPPEWglapssyyvpfvpiigip
Low Complexity Region (SEG)
MALSPLITallfalalsasfELSTCHEVLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMATTQVSGSFKVNLPSDAAMKTPSPLHCHAKLFGGPVQLYASKKNMVSKVMKPKNSNSYKISTPLAFSISCPSNVKDSKCGAANKFGSSKTVDLPLPPEWGLAPSSYYVPFVPIIGIP
Disordered region (IsUnstruct)
****PLITALLFALALSASFELSTCHEVLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMATTQVSGSFKVNL**********PLHCHAKLFGGPVQLYA***********************LAFSISC*******************TVDLPLPPEWGLAPSSYYVPFVPIIG**
Disordered Region (DISOPRED)
***SPLITALLFALALSASFELSTCHEVLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMA*TQVSGSFKV***************CHAKLFGGPVQLYA*****************YKISTPLAFSISCPS*************************EWGLAPSSYYVPFVPIIGIP
Disordered Region (DISEMBL)
MALSPLITALLFALALSASFELSTCHEVLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMATTQVSGSFKVNLPSDAAMKTPSPLHCHAKLFGGPVQLYASKKNMVSKVMKPKNSNSYKISTPLAFSISCPSNVKDSKCGAANKFGSSKTVDLPLPPEWGLAPSSYYVPFVPIIGIP
Disordered Region (DISPRO)
*ALSPLITALLFALALSASFELSTCHEVLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMATTQVSGSFKVNLPSDAAMKTPSPLHCHAKLFGGPVQLYASKKNMVSKVMKPKNSNSYKISTPLAFSISCPSN***************KTVDLPLPPEWGLAPSSYYVPFVPIIGIP
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MALSPLITALLFALALSASFELSTCHEVLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMATTQVSGSFKVNLPSDAAMKTPSPLHCHAKLFGGPVQLYASKKNMVSKVMKPKNSNSYKISTPLAFSISCPSNVKDSKCGAANKFGSSKTVDLPLPPEWGLAPSSYYVPFVPIIGIP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
225464902	172	PREDICTED: uncharacterized protein LOC10	0.966	1.0	0.646	5e-57
388501734	170	unknown [Medicago truncatula]	0.955	1.0	0.640	8e-55
224104587	173	predicted protein [Populus trichocarpa]	0.971	1.0	0.623	6e-53
388505264	172	unknown [Lotus japonicus]	0.966	1.0	0.617	7e-51
351726202	173	uncharacterized protein LOC100306681 pre	0.971	1.0	0.595	1e-50
351722741	174	uncharacterized protein LOC100306432 pre	0.960	0.982	0.591	2e-48
255565687	169	conserved hypothetical protein [Ricinus	0.949	1.0	0.595	1e-47
357453127	172	hypothetical protein MTR_2g086680 [Medic	0.966	1.0	0.578	2e-47
388506334	172	unknown [Lotus japonicus]	0.848	0.877	0.634	3e-47
388498938	149	unknown [Lotus japonicus]	0.820	0.979	0.590	3e-40

>gi|225464902|ref|XP_002274217.1| PREDICTED: uncharacterized protein LOC100258720 [Vitis vinifera] gi|147828169|emb|CAN68427.1| hypothetical protein VITISV_031997 [Vitis vinifera] gi|296084887|emb|CBI28296.3| unnamed protein product [Vitis vinifera]

 Score =  225 bits (574), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 115/178 (64%), Positives = 140/178 (78%), Gaps = 6/178 (3%)

Query: 1   MALSPLITALLFALALSASFELSTCHEVLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLA 60
           MAL+ +I  L FAL L A+ +LSTCH V+KG V+C DC   +D SG+KVLVKC+ +KKLA
Sbjct: 1   MALNRVIAPLFFALVL-ATIDLSTCH-VMKGSVTCLDCHRHHDFSGIKVLVKCDRVKKLA 58

Query: 61  MATTQVSGSFKVNLPSDAAMKTPSPLHCHAKLFGGPVQLYASKKNMVSKVMKPKNSNSYK 120
           MATT+  GSFK NLPSD    +P PL+C AKL GGP QLYA +KN VSK++K ++ +SY 
Sbjct: 59  MATTEADGSFKTNLPSDTQTSSP-PLNCLAKLLGGPNQLYAFRKNTVSKIVKARDDSSYT 117

Query: 121 ISTPLAFSISCPSNVKDSKCGAANKFGSSKTVDLPLPPEWGLAPSSYYVPFVPIIGIP 178
           ISTPL+FS +CPS+VK +K G   +FGSSKTVDLPLPPEWGLAPSSYY+PF PIIGIP
Sbjct: 118 ISTPLSFSTTCPSSVKGAKYG---EFGSSKTVDLPLPPEWGLAPSSYYIPFFPIIGIP 172

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388501734|gb|AFK38933.1| unknown [Medicago truncatula]

 Score =  218 bits (555), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 114/178 (64%), Positives = 133/178 (74%), Gaps = 8/178 (4%)

Query: 1   MALSPLITALLFALALSASFELSTCHEVLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLA 60
           MA   +ITALLFAL L    +LS C E+L+GKVSC DC++ YDLS +KV VKC  +K LA
Sbjct: 1   MAYVHVITALLFALVL-VRIDLSAC-EILQGKVSCVDCTHSYDLSDIKVTVKCEGVKNLA 58

Query: 61  MATTQVSGSFKVNLPSDAAMKTPSPLHCHAKLFGGPVQLYASKKNMVSKVMKPKNSNSYK 120
           M TT+  GSFKVNLPSD    T + ++C AKL GGP+QLYA K+N VS+V+K K  NSY 
Sbjct: 59  MTTTEEDGSFKVNLPSD---NTKTSMNCLAKLLGGPIQLYAKKQNQVSQVIKGKEENSYI 115

Query: 121 ISTPLAFSISCPSNVKDSKCGAANKFGSSKTVDLPLPPEWGLAPSSYYVPFVPIIGIP 178
           ISTPL+F ISCP N   + C A    GSSKT+DLPLPPEWGLAPSSYYVPFVPIIGIP
Sbjct: 116 ISTPLSFLISCPQN---TNCKATKPIGSSKTIDLPLPPEWGLAPSSYYVPFVPIIGIP 170

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104587|ref|XP_002313489.1| predicted protein [Populus trichocarpa] gi|118488493|gb|ABK96060.1| unknown [Populus trichocarpa] gi|222849897|gb|EEE87444.1| predicted protein [Populus trichocarpa]

 Score =  212 bits (539), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 111/178 (62%), Positives = 131/178 (73%), Gaps = 5/178 (2%)

Query: 1   MALSPLITALLFALALSASFELSTCHEVLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLA 60
           MA  PL   LL ALALS   +LSTC +VLKGKVSC DC   YD S +KV VKC+ ++KLA
Sbjct: 1   MAFHPLTIVLLLALALSG-IQLSTC-QVLKGKVSCLDCGGHYDYSEIKVGVKCDKVRKLA 58

Query: 61  MATTQVSGSFKVNLPSDAAMKTPSPLHCHAKLFGGPVQLYASKKNMVSKVMKPKNSNSYK 120
             TTQ  GSF+V LP   +    +PL C AKL GGP QLY S++NMVSK+++  +SNSY 
Sbjct: 59  TTTTQSDGSFEVKLPPGTSTAA-TPLICLAKLLGGPSQLYVSRQNMVSKIVQTHDSNSYT 117

Query: 121 ISTPLAFSISCPSNVKDSKCGAANKFGSSKTVDLPLPPEWGLAPSSYYVPFVPIIGIP 178
           ISTPLAFS +C +     KCG +N+FGSSKTVDLPLP EWGLAPSSYYVPF+PIIGIP
Sbjct: 118 ISTPLAFSSTCSAG--GGKCGVSNQFGSSKTVDLPLPREWGLAPSSYYVPFIPIIGIP 173

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388505264|gb|AFK40698.1| unknown [Lotus japonicus]

 Score =  205 bits (521), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 110/178 (61%), Positives = 135/178 (75%), Gaps = 6/178 (3%)

Query: 1   MALSPLITALLFALALSASFELSTCHEVLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLA 60
           MA   + TALLFAL L A  + STC +V+ GKVSC DC+ ++DLS +KVLVKC  +KKLA
Sbjct: 1   MAGFQVFTALLFALTL-ARIDPSTC-QVVNGKVSCVDCTQNHDLSDIKVLVKCEGVKKLA 58

Query: 61  MATTQVSGSFKVNLPSDAAMKTPSPLHCHAKLFGGPVQLYASKKNMVSKVMKPKNSNSYK 120
           +A+T+ +G FKV+LPSD   K  S  +C AKL GGPVQLYA+++N VS+++K +  NSY 
Sbjct: 59  LASTEDNGFFKVDLPSDKT-KPSSAGNCLAKLVGGPVQLYATRQNQVSQIIKSQEPNSYT 117

Query: 121 ISTPLAFSISCPSNVKDSKCGAANKFGSSKTVDLPLPPEWGLAPSSYYVPFVPIIGIP 178
           ISTPL+F  SCP N   + C AA   GSSKTVDLPLPPEWGLAPSSYYVPF+PIIGIP
Sbjct: 118 ISTPLSFMKSCPQN---TNCKAAKPVGSSKTVDLPLPPEWGLAPSSYYVPFIPIIGIP 172

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726202|ref|NP_001238654.1| uncharacterized protein LOC100306681 precursor [Glycine max] gi|255629265|gb|ACU14977.1| unknown [Glycine max]

 Score =  204 bits (519), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 106/178 (59%), Positives = 133/178 (74%), Gaps = 5/178 (2%)

Query: 1   MALSPLITALLFALALSASFELSTCHEVLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLA 60
           MA   +IT  LFALAL+  +  STC +V++GKVSC DC+++YDLS +KV V+C+ +KKLA
Sbjct: 1   MACIQVITVFLFALALAKIYP-STC-QVVQGKVSCVDCTHNYDLSDIKVSVRCDGVKKLA 58

Query: 61  MATTQVSGSFKVNLPSDAAMKTPSPLHCHAKLFGGPVQLYASKKNMVSKVMKPKNSNSYK 120
           +ATT+  GSFKV+LP D    + S  +C AKL GGPVQLY S++N VS+++K K+ NSY 
Sbjct: 59  LATTENDGSFKVDLPLDHTKPSSSVNNCLAKLLGGPVQLYVSRENQVSQIIKGKDQNSYT 118

Query: 121 ISTPLAFSISCPSNVKDSKCGAANKFGSSKTVDLPLPPEWGLAPSSYYVPFVPIIGIP 178
           IST L+F  SCP     +KC    + GSSKTVDLPLPPEWGLAPSSYYVPF PIIGIP
Sbjct: 119 ISTSLSFRTSCPLT---TKCKGGKQVGSSKTVDLPLPPEWGLAPSSYYVPFFPIIGIP 173

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351722741|ref|NP_001234951.1| uncharacterized protein LOC100306432 precursor [Glycine max] gi|255628523|gb|ACU14606.1| unknown [Glycine max]

 Score =  196 bits (499), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/181 (59%), Positives = 131/181 (72%), Gaps = 10/181 (5%)

Query: 1   MALSPLITALLFALALSASFELSTCHEVLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLA 60
           MA S +IT LLFALA+ A    S C  V +GKVSC+DC+++YD SG+KV VKC  +K LA
Sbjct: 1   MAFSQVITTLLFALAI-ARISPSACQTV-EGKVSCTDCADNYDFSGIKVSVKCEGVKNLA 58

Query: 61  MATTQVSGSFKVNLPSDAAMKTPSPLHCHAKLFGGP-VQLYASKKNMVSKVMKPKNSNSY 119
           MATT+  G  +V+LPSD     P  ++C  KL GGP   LYASKKN+VS+++K K  N+Y
Sbjct: 59  MATTEDKGFSQVDLPSDQTK--PPSVNCFTKLLGGPNTNLYASKKNLVSQIVKGKEKNTY 116

Query: 120 KISTPLAFSISCPSNVKDSKCGAAN--KFGSSKTVDLPLPPEWGLAPSSYYVPFVPIIGI 177
            ISTPL+F  SCP N   ++C AAN  +FGSSKT DLPLP EWGLAPSS+YVPF PIIGI
Sbjct: 117 TISTPLSFFTSCPQN---TECKAANYNQFGSSKTFDLPLPREWGLAPSSFYVPFFPIIGI 173

Query: 178 P 178
           P
Sbjct: 174 P 174

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565687|ref|XP_002523833.1| conserved hypothetical protein [Ricinus communis] gi|223536921|gb|EEF38559.1| conserved hypothetical protein [Ricinus communis]

 Score =  194 bits (493), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/178 (59%), Positives = 129/178 (72%), Gaps = 9/178 (5%)

Query: 1   MALSPLITALLFALALSASFELSTCHEVLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLA 60
           MA +P +  LLFAL+LS   + ST  +VLK KVSC DC+  YD SG+KVLVKC ++KKLA
Sbjct: 1   MASTPAVVVLLFALSLSG-IQFST-SQVLKAKVSCLDCTAHYDFSGIKVLVKCANVKKLA 58

Query: 61  MATTQVSGSFKVNLPSDAAMKTPSPLHCHAKLFGGPVQLYASKKNMVSKVMKPKNSNSYK 120
             TT+  GSF+V LPS  + K  +PL+C AKL GG  Q+YA++KNMVS+++K K+S+SY 
Sbjct: 59  TTTTKSKGSFEVELPSGNS-KAETPLNCLAKLIGGTSQIYATRKNMVSRIVKTKDSSSYT 117

Query: 121 ISTPLAFSISCPSNVKDSKCGAANKFGSSKTVDLPLPPEWGLAPSSYYVPFVPIIGIP 178
           ISTPLAFS + P      K G     G SKTVDLPLP EWGLAPSSYYVPF PIIGIP
Sbjct: 118 ISTPLAFSTAFPEG--QLKGG----IGESKTVDLPLPREWGLAPSSYYVPFFPIIGIP 169

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357453127|ref|XP_003596840.1| hypothetical protein MTR_2g086680 [Medicago truncatula] gi|355485888|gb|AES67091.1| hypothetical protein MTR_2g086680 [Medicago truncatula]

 Score =  193 bits (491), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/178 (57%), Positives = 131/178 (73%), Gaps = 6/178 (3%)

Query: 1   MALSPLITALLFALALSASFELSTCHEVLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLA 60
           MA   +IT LLFALAL A  + S C +++KGKVSC+DC+ DYD SG+KV +KC  +K +A
Sbjct: 1   MAFVHVITTLLFALAL-ARIDPSVC-QMVKGKVSCNDCAQDYDFSGIKVSMKCEGVKNMA 58

Query: 61  MATTQVSGSFKVNLPSDAAMKTPSPLHCHAKLFGGPVQLYASKKNMVSKVMKPKNSNSYK 120
           MATT+  GSF V+L +  A K P   +CHAKL GGP  LYAS++N  S+++K K  NSY 
Sbjct: 59  MATTENDGSFMVDLSTSHA-KLPYD-NCHAKLLGGPNNLYASRRNQFSQIVKGKEENSYT 116

Query: 121 ISTPLAFSISCPSNVKDSKCGAANKFGSSKTVDLPLPPEWGLAPSSYYVPFVPIIGIP 178
           +STPL+F  SCP N K+ K    N+FGSSK+++ PLPPEWGLAPSSYY+PF PIIGIP
Sbjct: 117 LSTPLSFFTSCPQN-KECKT-EKNEFGSSKSINFPLPPEWGLAPSSYYLPFFPIIGIP 172

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388506334|gb|AFK41233.1| unknown [Lotus japonicus]

 Score =  192 bits (489), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 99/156 (63%), Positives = 122/156 (78%), Gaps = 5/156 (3%)

Query: 23  STCHEVLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMATTQVSGSFKVNLPSDAAMKT 82
           STC +V+ GKVSC DC+ ++DLS +KVLVKC  +KKLA+A+T+ +G FKV+LPSD   K 
Sbjct: 22  STC-QVVNGKVSCVDCTQNHDLSDIKVLVKCEGVKKLALASTEDNGFFKVDLPSDKT-KP 79

Query: 83  PSPLHCHAKLFGGPVQLYASKKNMVSKVMKPKNSNSYKISTPLAFSISCPSNVKDSKCGA 142
            S  +C AKL GGPVQLYA+++N VS+++K +  NSY ISTPL+F  SCP N   + C A
Sbjct: 80  SSAGNCLAKLVGGPVQLYATRQNQVSQIIKSQEPNSYTISTPLSFMKSCPQN---TNCKA 136

Query: 143 ANKFGSSKTVDLPLPPEWGLAPSSYYVPFVPIIGIP 178
           A   GSSKTVDLPLPPEWGLAPSSYYVPF+PIIGIP
Sbjct: 137 AKPVGSSKTVDLPLPPEWGLAPSSYYVPFIPIIGIP 172

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388498938|gb|AFK37535.1| unknown [Lotus japonicus]

 Score =  169 bits (429), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 91/154 (59%), Positives = 113/154 (73%), Gaps = 8/154 (5%)

Query: 28  VLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMATT-QVSGSFKVNLPSDAAMKTPSPL 86
           ++KG VSC+DC+++YD SG+KV VKC  ++  A+ TT +  GSFKV+LPS  A K+PS +
Sbjct: 1   MVKGNVSCTDCTDNYDFSGIKVSVKCEGVQNKALTTTTEEDGSFKVHLPSHYA-KSPS-M 58

Query: 87  HCHAKLFGGPVQLYASKKNMVSKVMKPKNSNSYKISTPLAFSISCPSNVKDSKCGAANKF 146
            C AKL GGP  LYAS+KN VS ++K K  N Y ISTPL+F   CP N   S+C AAN+F
Sbjct: 59  KCLAKLLGGPDLLYASRKNRVSLIVKAKEENIYTISTPLSFFTYCPQN---SECKAANEF 115

Query: 147 GSSKTVDLPLPPEWGLAPSSYY--VPFVPIIGIP 178
           GSSKT D P+PP WGLAPSSYY  +PF PIIGIP
Sbjct: 116 GSSKTFDFPMPPAWGLAPSSYYFPLPFFPIIGIP 149

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
TAIR|locus:504956084	173	AT2G27385 "AT2G27385" [Arabido	0.797	0.820	0.496	4.2e-31
TAIR|locus:2176322	172	AT5G22430 "AT5G22430" [Arabido	0.842	0.872	0.465	3.4e-29

TAIR|locus:504956084 AT2G27385 "AT2G27385" [Arabidopsis thaliana (taxid:3702)]

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 80/161 (49%), Positives = 97/161 (60%)

Query:    22 LSTCHEV----LKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMATTQVSGSFKVNLPSD 77
             LS+C  V    ++GKVSC DC NDYD SG+ V V C+H       TT   G F   LPS 
Sbjct:    28 LSSCLVVSASLVEGKVSCFDCPNDYDYSGITVGVSCSHTNTRFTVTTDKKGDFISELPS- 86

Query:    78 AAMKTPSPLHCHAKLFGGPVQLYASKKNMVSKVMKPKNSNSYKISTPLAFSISCPSNVKD 137
                K  S  +C A+L G   QLYASK N+ SK++K    + Y +S+ L F  SCP +   
Sbjct:    87 ---KIES--NCEAELQGSVKQLYASKNNVKSKIVK-LGGDKYGLSSKLFFLKSCPRSF-- 138

Query:   138 SKCGAANKFGSSKTVDLPLPPEWGLAPSSYYVPFVPIIGIP 178
                     F SSKTVDLP+PPEWGLAP+SYYVPF+PIIGIP
Sbjct:   139 ------GSFSSSKTVDLPVPPEWGLAPTSYYVPFLPIIGIP 173

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2176322 AT5G22430 "AT5G22430" [Arabidopsis thaliana (taxid:3702)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 74/159 (46%), Positives = 100/159 (62%)

Query:    21 ELSTCHEVLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMATTQVSGSFKVNLPSDAAM 80
             ELS    ++ GK+SC DC  D+D SG+KVL+KC+  KK   A     GSF+  LP+  A 
Sbjct:    22 ELSAS-SLVSGKISCLDCHRDFDFSGIKVLLKCDGEKKQITAVAAADGSFRSVLPT--AD 78

Query:    81 KTPSPLHCHAKLFGGPVQLYASKKNMVSKVMKPKN-SNSYKISTPLAFSISCPSNVKDSK 139
             K  S ++C AKL GGP QLYA K N+VS+++K K+ S     S PLAFS+SCP   K S+
Sbjct:    79 KKGS-INCLAKLLGGPEQLYAHKHNLVSELVKSKHDSKVLTTSNPLAFSLSCP---KPSR 134

Query:   140 CGAANKFGSSKTVDLPLPPEWGLAPSSYYVPFVPIIGIP 178
                 +  G SKT++ P    +G  P+S++ PF+PIIGIP
Sbjct:   135 DDIGSMIGDSKTINFPGAGGFGFPPASFF-PFLPIIGIP 172


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.130   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      178       166   0.00097  107 3  11 22  0.42    32
                                                     30  0.46    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  583 (62 KB)
  Total size of DFA:  145 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.67u 0.09s 15.76t   Elapsed:  00:00:03
  Total cpu time:  15.67u 0.09s 15.76t   Elapsed:  00:00:03
  Start:  Mon May 20 17:33:32 2013   End:  Mon May 20 17:33:35 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0048481 "ovule development" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	178
pfam01190	95	pfam01190, Pollen_Ole_e_I, Pollen proteins Ole e I	1e-08

>gnl|CDD|216353 pfam01190, Pollen_Ole_e_I, Pollen proteins Ole e I like

 Score = 50.2 bits (120), Expect = 1e-08
 Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 10/78 (12%)

Query: 31 GKVSCSDCSN------DYDLSGVKVLVKC----NHLKKLAMATTQVSGSFKVNLPSDAAM 80
          G V C  C         Y L G KV ++C      +   A A T   G FKV LP D + 
Sbjct: 3  GSVYCDTCRASGFELSAYPLPGAKVKIECKDGDGRVVTSAEAVTDEKGYFKVELPGDPSS 62

Query: 81 KTPSPLHCHAKLFGGPVQ 98
           T     C AKL   P  
Sbjct: 63 LTHLESACRAKLVSSPDS 80

Length = 95

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	178
PF01190	97	Pollen_Ole_e_I: Pollen proteins Ole e I like; Inte	99.81
PF13620	82	CarboxypepD_reg: Carboxypeptidase regulatory-like	95.99
PF13715	88	DUF4480: Domain of unknown function (DUF4480)	94.86
PF05738	70	Cna_B: Cna protein B-type domain; InterPro: IPR008	90.87
PF01060	80	DUF290: Transthyretin-like family; InterPro: IPR00	88.35
cd03866	376	M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM	87.12
cd03858	374	M14_CP_N-E_like Carboxypeptidase (CP) N/E-like sub	86.2

>PF01190 Pollen_Ole_e_I: Pollen proteins Ole e I like; InterPro: IPR006041 Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms

Probab=99.81  E-value=7.9e-20  Score=134.53  Aligned_cols=75  Identities=33%  Similarity=0.526  Sum_probs=63.0

Q ss_pred             EEEEEEccCCCC-----CccccCcEEEEEecCCCc----eeeEEecCCceEEEEcCCCCccC-CCCCCcceEEEccCCcc
Q 030378           29 LKGKVSCSDCSN-----DYDLSGVKVLVKCNHLKK----LAMATTQVSGSFKVNLPSDAAMK-TPSPLHCHAKLFGGPVQ   98 (178)
Q Consensus        29 V~GkV~CddC~~-----~~~isGakV~v~C~~~k~----~~~a~TD~~G~FkV~lp~~~~~~-~~~~~~C~akLl~sp~~   98 (178)
                      |+|+|||++|+.     .+.|+||+|+|+|++.++    .++++||++|.|+|+||.+.... ....+.|.|+|++||++
T Consensus         1 V~G~V~C~~C~~~~~~~~~~l~GA~V~v~C~~~~~~~~~~~~~~Td~~G~F~i~l~~~~~~~~~~~~~~C~v~l~~sp~~   80 (97)
T PF01190_consen    1 VEGVVYCDDCSSGFSRAAKPLPGAKVSVECKDGNGGVVFSAEAKTDENGYFSIELPSDPGSSSPHLSSSCRVKLVSSPDP   80 (97)
T ss_pred             CEEEEEeCCCCCCccccCccCCCCEEEEECCCCCCCcEEEEEEEeCCCCEEEEEecCccccccCCCCCCcEEEEeCCCcC
Confidence            799999999999     557999999999998654    55799999999999999873200 12569999999999999


Q ss_pred             ccccc
Q 030378           99 LYASK  103 (178)
Q Consensus        99 ~Ca~~  103 (178)
                      .|+..
T Consensus        81 ~C~~~   85 (97)
T PF01190_consen   81 SCNVP   85 (97)
T ss_pred             cCCCC
Confidence            99754

A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Ole e 1. A number of plant pollen proteins, whose biological function is not yet known, are structurally related []. These proteins are most probably secreted and consist of about 145 residues. There are six cysteines which are conserved in the sequence of these proteins. They seem to be involved in disulphide bonds.

>PF13620 CarboxypepD_reg: Carboxypeptidase regulatory-like domain; PDB: 3MN8_D 3P0D_I 3KCP_A 2B59_B 1UWY_A 1H8L_A 1QMU_A 2NSM_A

Probab=95.99  E-value=0.015  Score=40.09  Aligned_cols=48  Identities=21%  Similarity=0.322  Sum_probs=34.8

Q ss_pred             EEEEEEccCCCCCccccCcEEEEEecCCCceeeEEecCCceEEEE-cCCCCc
Q 030378           29 LKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMATTQVSGSFKVN-LPSDAA   79 (178)
Q Consensus        29 V~GkV~CddC~~~~~isGakV~v~C~~~k~~~~a~TD~~G~FkV~-lp~~~~   79 (178)
                      |.|+|.=.   .|-.++||.|.+.-.+......++||++|.|.+. ||....
T Consensus         2 I~G~V~d~---~g~pv~~a~V~l~~~~~~~~~~~~Td~~G~f~~~~l~~g~Y   50 (82)
T PF13620_consen    2 ISGTVTDA---TGQPVPGATVTLTDQDGGTVYTTTTDSDGRFSFEGLPPGTY   50 (82)
T ss_dssp             EEEEEEET---TSCBHTT-EEEET--TTTECCEEE--TTSEEEEEEE-SEEE
T ss_pred             EEEEEEcC---CCCCcCCEEEEEEEeeCCCEEEEEECCCceEEEEccCCEeE
Confidence            78999843   6778999999999876666778999999999999 887544

>PF13715 DUF4480: Domain of unknown function (DUF4480)

Probab=94.86  E-value=0.084  Score=37.03  Aligned_cols=44  Identities=30%  Similarity=0.470  Sum_probs=33.9

Q ss_pred             EEEEEEccCCCCCccccCcEEEEEecCCCceeeEEecCCceEEEEcCCCC
Q 030378           29 LKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMATTQVSGSFKVNLPSDA   78 (178)
Q Consensus        29 V~GkV~CddC~~~~~isGakV~v~C~~~k~~~~a~TD~~G~FkV~lp~~~   78 (178)
                      |+|+|.  |=..+-.++||.|.+.=.    ...+.||++|.|++.++...
T Consensus         2 i~G~V~--d~~t~~pl~~a~V~~~~~----~~~~~Td~~G~F~i~~~~g~   45 (88)
T PF13715_consen    2 ISGKVV--DSDTGEPLPGATVYLKNT----KKGTVTDENGRFSIKLPEGD   45 (88)
T ss_pred             EEEEEE--ECCCCCCccCeEEEEeCC----cceEEECCCeEEEEEEcCCC
Confidence            678886  334467799999998722    26799999999999988653

>PF05738 Cna_B: Cna protein B-type domain; InterPro: IPR008454 This entry represents a repeated B region domain found in the collagen-binding surface protein Cna in Staphylococcus aureus, as well as other related domains

Probab=90.87  E-value=0.4  Score=32.34  Aligned_cols=36  Identities=19%  Similarity=0.297  Sum_probs=28.8

Q ss_pred             ccCcEEEEEecCCCceee--EEecCCceEEEE-cCCCCc
Q 030378           44 LSGVKVLVKCNHLKKLAM--ATTQVSGSFKVN-LPSDAA   79 (178)
Q Consensus        44 isGakV~v~C~~~k~~~~--a~TD~~G~FkV~-lp~~~~   79 (178)
                      |+||++.|.-.+......  .+||++|.|.+. |+....
T Consensus         1 L~Ga~f~L~~~~~~~~~~~~~~Td~~G~~~f~~L~~G~Y   39 (70)
T PF05738_consen    1 LAGATFELYDEDGNEVIEVTVTTDENGKYTFKNLPPGTY   39 (70)
T ss_dssp             -STEEEEEEETTSEEEEEEEEEGGTTSEEEEEEEESEEE
T ss_pred             CCCeEEEEEECCCCEEEEEEEEECCCCEEEEeecCCeEE
Confidence            589999999998777665  999999999998 554434

The B region domain of Cna has a prealbumin-like beta-sandwich fold of seven strands in two sheets with a Greek key topology []. However, this domain does not mediate collagen binding, the IPR008456 from INTERPRO region carries out that function; instead it appears to form a stalk that presents the ligand binding domain away from the bacterial cell surface. Cna is a collagen-binding MSCRAMM (Microbial Surface Component Recognizing Adhesive Matrix Molecules), and is necessary and sufficient for S. aureus cells to adhere to cartilage.; PDB: 2X5P_A 3RKP_A 3KPT_A 1VLF_T 1TI2_F 1TI6_D 1TI4_J 1VLE_V 1VLD_X 3PF2_A ....

>PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 []

Probab=88.35  E-value=1.5  Score=31.35  Aligned_cols=43  Identities=23%  Similarity=0.355  Sum_probs=32.2

Q ss_pred             EEEEEccCCCCCccccCcEEEEEecCC----CceeeEEecCCceEEEEcCC
Q 030378           30 KGKVSCSDCSNDYDLSGVKVLVKCNHL----KKLAMATTQVSGSFKVNLPS   76 (178)
Q Consensus        30 ~GkV~CddC~~~~~isGakV~v~C~~~----k~~~~a~TD~~G~FkV~lp~   76 (178)
                      +|+..|.    +.-++|++|.|==++.    .-+.+++||++|.|++.=-.
T Consensus         1 ~G~L~C~----~~P~~~~~V~L~e~d~~~~Ddll~~~~Td~~G~F~l~G~~   47 (80)
T PF01060_consen    1 KGQLMCG----GKPAKNVKVKLWEDDYFDPDDLLDETKTDSDGNFELSGST   47 (80)
T ss_pred             CeEEEeC----CccCCCCEEEEEECCCCCCCceeEEEEECCCceEEEEEEc
Confidence            4777775    3458999999877764    22667999999999987543

The proteins show weak similarity to transthyretin (formerly called prealbumin) which transports thyroid hormones. The specific function of this protein is unknown.; GO: 0005615 extracellular space

>cd03866 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=87.12  E-value=1.5  Score=40.02  Aligned_cols=47  Identities=26%  Similarity=0.251  Sum_probs=36.5

Q ss_pred             EEEEEEEccCCCCCccccCcEEEEEecCCCceeeEEecCCceEEEEcCCCCc
Q 030378           28 VLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMATTQVSGSFKVNLPSDAA   79 (178)
Q Consensus        28 vV~GkV~CddC~~~~~isGakV~v~C~~~k~~~~a~TD~~G~FkV~lp~~~~   79 (178)
                      -|+|+|. |.  .|--|+||+|.|+  +.......+||++|.|...|+....
T Consensus       296 gI~G~V~-D~--~g~pi~~A~V~v~--g~~~~~~~~T~~~G~y~~~l~pG~Y  342 (376)
T cd03866         296 GVKGQVF-DS--NGNPIPNAIVEVK--GRKHICPYRTNVNGEYFLLLLPGKY  342 (376)
T ss_pred             ceEEEEE-CC--CCCccCCeEEEEE--cCCceeEEEECCCceEEEecCCeeE
Confidence            4999998 54  4668999999997  4333456799999999888776644

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPM is an extracellular glycoprotein, bound to cell membranes via a glycosyl-phosphatidylinositol on the C-terminus of the protein. It specifically removes C-terminal basic residues such as lysine and arginine from peptides and proteins. The highest levels of CPM have been found in human lung and placenta, but significant amounts are present in kidney, blood vessels, intestine, brain, and peripheral nerves. CPM has also been found in soluble form in various body fluids, including amniotic fluid, seminal plasma and urine. Due to its wide distribution in a variety of tissues, it is believed that it plays an important role in the cont

>cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=86.20  E-value=1.5  Score=39.28  Aligned_cols=45  Identities=20%  Similarity=0.127  Sum_probs=36.2

Q ss_pred             EEEEEEEccCCCCCccccCcEEEEEecCCCceeeEEecCCceEEEEcCCCCc
Q 030378           28 VLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMATTQVSGSFKVNLPSDAA   79 (178)
Q Consensus        28 vV~GkV~CddC~~~~~isGakV~v~C~~~k~~~~a~TD~~G~FkV~lp~~~~   79 (178)
                      .|+|+|.-.   .+-.++||+|.|+    .....++||++|.|.+.||....
T Consensus       299 ~i~G~V~d~---~g~pl~~A~V~i~----~~~~~~~Td~~G~f~~~l~~G~y  343 (374)
T cd03858         299 GIKGFVRDA---NGNPIANATISVE----GINHDVTTAEDGDYWRLLLPGTY  343 (374)
T ss_pred             ceEEEEECC---CCCccCCeEEEEe----cceeeeEECCCceEEEecCCEeE
Confidence            599999876   4678999999993    33456899999999999985533

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappr

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	178
4ank_A	147	Transthyretin; hormone binding protein, thyroxine	84.27
2nsm_A	439	Carboxypeptidase N catalytic chain; caroxypeptidas	83.49
3uaf_A	117	TTR-52; beta barrel/sandwich, cell engulfment, sec	82.67
1uwy_A	426	Carboxypeptidase M; metallopeptidase, GPI-anchor,	82.25
3mn8_A	435	LP15968P; catalytic domain of alpha/beta-hydrolase	81.6
1h8l_A	380	Carboxypeptidase GP180 residues 503-882; hydrolase	81.31

>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}

Probab=84.27  E-value=1.2  Score=35.16  Aligned_cols=124  Identities=16%  Similarity=0.099  Sum_probs=52.5

Q ss_pred             CCchhHHHHHHHHHHHhhccccCccceEEEEEEE--ccCCCCCccccCcEEEEEecCCC----ceeeEEecCCceEEEEc
Q 030378            1 MALSPLITALLFALALSASFELSTCHEVLKGKVS--CSDCSNDYDLSGVKVLVKCNHLK----KLAMATTQVSGSFKVNL   74 (178)
Q Consensus         1 MA~~~~~~~llfalaL~~~~~~s~~~fvV~GkV~--CddC~~~~~isGakV~v~C~~~k----~~~~a~TD~~G~FkV~l   74 (178)
                      ||...++.+.|..|++++.+++.+.. --+.-.+  =+|=..|---.|++|.|.-.+..    ..++++||+||.-+=-+
T Consensus         1 m~~~~~~l~~la~l~~~s~a~p~~~~-~sk~PLTtHVLDt~~G~PA~gv~V~L~~~~~~~~~~~l~~~~Td~DGR~~~ll   79 (147)
T 4ank_A            1 MASHRLLLLCLAGLVFVSEAGPTGTG-ESKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLT   79 (147)
T ss_dssp             ------------------------------CCEEEEEEETTTTEECCSCEEEEEEECTTSCEEEEEEEECCTTSEECCSC
T ss_pred             CchHHHHHHHHHHHHhhcccCCcCCC-CCCCCeEEEEEeCCCCcCCCCCEEEEEEECCCCCeEEEEEEEeCCCCCCCCCC
Confidence            88888777776777764222111110 0111111  13445555679999999765332    25579999999976434


Q ss_pred             CCCCccCCCCCCcceEEEccCCccccccc----Ccceeeeeccc-CCC--cee---eeccceeeeec
Q 030378           75 PSDAAMKTPSPLHCHAKLFGGPVQLYASK----KNMVSKVMKPK-NSN--SYK---ISTPLAFSISC  131 (178)
Q Consensus        75 p~~~~~~~~~~~~C~akLl~sp~~~Ca~~----~~~~srIv~t~-~~~--~~r---~anpL~F~~~~  131 (178)
                      +.+..      ..-..+|+=-.....+..    ......|+..- |.+  -|-   +-+|-+|+|..
T Consensus        80 ~~~~~------~~G~Y~L~F~tg~Yf~~~g~~~F~p~V~V~F~i~d~~~~HYHVPLLlSP~gYST~~  140 (147)
T 4ank_A           80 TEEEF------VEGIYKVEIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSTTA  140 (147)
T ss_dssp             CTTTC------CSEEEEEEECHHHHHHHTTCCCSEEEEEEEEEESTTSCCEEEEEEEEETTEEEEEE
T ss_pred             Ccccc------CCceEEEEEEHHHHHHhcCCCccccceEEEEEEECCCCCceeEeEEEcCCCcceee
Confidence            44322      345566664444333322    23334555432 222  354   46888888863

>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}

Probab=83.49  E-value=1.1  Score=39.54  Aligned_cols=44  Identities=23%  Similarity=0.144  Sum_probs=35.1

Q ss_pred             EEEEEEEccCCCCCccccCcEEEEEecCCCceeeEEecCCceEEEEcCCCC
Q 030378           28 VLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMATTQVSGSFKVNLPSDA   78 (178)
Q Consensus        28 vV~GkV~CddC~~~~~isGakV~v~C~~~k~~~~a~TD~~G~FkV~lp~~~   78 (178)
                      .|+|+|.  | ..+--|.||+|.|+=    ....++||++|.|.+.||...
T Consensus       322 ~i~G~V~--D-~~g~pi~gA~V~v~~----~~~~~~Td~~G~y~~~l~~G~  365 (439)
T 2nsm_A          322 GIKGMVL--D-QNYNNLANAVISVSG----INHDVTSGDHGDYFRLLLPGI  365 (439)
T ss_dssp             SEEEEEE--C-TTSCBCTTCEEEETT----EEEEEECCTTSEEEECCCSEE
T ss_pred             ceEEEEE--c-CCCCCccceEEEEEc----ccceeEECCCCeEEEccCCee
Confidence            5999995  4 577789999999962    235699999999988887653

>3uaf_A TTR-52; beta barrel/sandwich, cell engulfment, secreted, protein BIN; 2.01A {Caenorhabditis elegans}

Probab=82.67  E-value=1.9  Score=32.62  Aligned_cols=49  Identities=12%  Similarity=0.098  Sum_probs=32.3

Q ss_pred             ceEEEEEEEccCCCCCccccCcEEEEEecC------CCceeeEEecCCceEEEEcCC
Q 030378           26 HEVLKGKVSCSDCSNDYDLSGVKVLVKCNH------LKKLAMATTQVSGSFKVNLPS   76 (178)
Q Consensus        26 ~fvV~GkV~CddC~~~~~isGakV~v~C~~------~k~~~~a~TD~~G~FkV~lp~   76 (178)
                      .+.|+|+..|..=  -+...+++|.|-=++      ..-+.++.||++|.|+|.=-.
T Consensus         4 sV~V~G~L~C~~~--Pa~~~~V~V~L~d~~~~~~d~Ddll~~~~Td~~G~F~l~G~~   58 (117)
T 3uaf_A            4 CLMATGVLKCPTD--PEAVKKVHIDLWDAAAAAAESDDLMGRTWSDRNGNFQVTGCA   58 (117)
T ss_dssp             EEEEEEEEECTTC--GGGGSSCEEEEEEHHHHHTTSCCEEEEEECCTTSEEEEEEEE
T ss_pred             EEEEEEEEEeCCc--cCCCCCEEEEEEecccccCCchHhheeeEECCCCEEEEEEEe
Confidence            3579999999641  233446666554221      123778999999999997543

>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1

Probab=82.25  E-value=0.9  Score=40.17  Aligned_cols=47  Identities=26%  Similarity=0.244  Sum_probs=35.4

Q ss_pred             eEEEEEEEccCCCCCccccCcEEEEEecCCCceeeEEecCCceEEEEcCCCC
Q 030378           27 EVLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMATTQVSGSFKVNLPSDA   78 (178)
Q Consensus        27 fvV~GkV~CddC~~~~~isGakV~v~C~~~k~~~~a~TD~~G~FkV~lp~~~   78 (178)
                      ..|+|+|.  | ..|--|.||+|.|+=..  ....++||++|.|.+.|+...
T Consensus       296 ~~I~G~V~--D-~~g~pi~gA~V~v~g~~--~~~~~~Td~~G~y~~~l~~G~  342 (426)
T 1uwy_A          296 LGVKGQVF--D-QNGNPLPNVIVEVQDRK--HICPYRTNKYGEYYLLLLPGS  342 (426)
T ss_dssp             CSEEEEEE--C-TTSCBCCSCEEEETTCC--CSSCCBCCTTCEEEECCCSEE
T ss_pred             ceeEEEEE--C-CCCCccCceEEEEEecc--ccceeEeCCCCEEEeccCCee
Confidence            35999995  3 46778999999997432  223479999999998877653

>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}

Probab=81.60  E-value=1.8  Score=38.52  Aligned_cols=46  Identities=20%  Similarity=0.242  Sum_probs=35.0

Q ss_pred             EEEEEEEccCCCCCccccCcEEEEEecCCCceeeEEecCCceEEEEcCCCCc
Q 030378           28 VLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMATTQVSGSFKVNLPSDAA   79 (178)
Q Consensus        28 vV~GkV~CddC~~~~~isGakV~v~C~~~k~~~~a~TD~~G~FkV~lp~~~~   79 (178)
                      -|+|+|. |  ..|--|.||+|.|+  +. +...++||++|.|.+.|+....
T Consensus       338 gv~G~V~-D--~~G~pi~gA~V~v~--g~-~~~~~~Td~~G~y~~~l~pG~Y  383 (435)
T 3mn8_A          338 GIKGLVT-D--ASGFPIADANVYVA--GL-EEKPMRTSKRGEYWRLLTPGLY  383 (435)
T ss_dssp             SEEEEEE-C--SSSCBCTTCEEEET--TC-TTSCEECCTTCEEEECCCSEEE
T ss_pred             eeEEEEE-C--CCCCccCceEEEEe--cc-cccceEeCCCCeEEEecCCCcE
Confidence            4999996 3  26788999999994  21 1356899999999888876543

>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*

Probab=81.31  E-value=1.7  Score=37.53  Aligned_cols=48  Identities=19%  Similarity=0.106  Sum_probs=36.2

Q ss_pred             ceEEEEEEEccCCCCCccccCcEEEEEecCCCceeeEEecCCceEEEEcCCCCc
Q 030378           26 HEVLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMATTQVSGSFKVNLPSDAA   79 (178)
Q Consensus        26 ~fvV~GkV~CddC~~~~~isGakV~v~C~~~k~~~~a~TD~~G~FkV~lp~~~~   79 (178)
                      +..|+|+|.  |=..+--|.||+|.|+=    ....++||++|.|.+.||....
T Consensus       300 ~~~i~G~V~--D~~~g~pi~~A~V~v~~----~~~~~~Td~~G~y~~~l~~G~Y  347 (380)
T 1h8l_A          300 HRGIWGFVL--DATDGRGILNATISVAD----INHPVTTYKDGDYWRLLVQGTY  347 (380)
T ss_dssp             GCEEEEEEE--ETTTCSBCTTCEEEETT----EEEEEECCTTSEEEECCCSEEE
T ss_pred             cccceEEEE--eCCCCCccCceEEEEec----CcceeEECCCEEEEEecCCCcE
Confidence            347999995  43456789999999962    2346899999999988776543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	178
d1vlfn1	79	Transhydroxylase beta subunit, BthL, C-terminal do	94.82
d1uwya1	107	Carboxypeptidase M C-terminal domain {Human (Homo	91.92
d1h8la1	79	Carboxypeptidase D C-terminal domain {Crested duck	91.34
d2p5zx1	91	Hypothetical protein c3393 {Escherichia coli o6 [T	83.95

>d1vlfn1 b.3.5.1 (N:196-274) Transhydroxylase beta subunit, BthL, C-terminal domain {Pelobacter acidigallici [TaxId: 35816]}

class: All beta proteins
fold: Prealbumin-like
superfamily: Cna protein B-type domain
family: Cna protein B-type domain
domain: Transhydroxylase beta subunit, BthL, C-terminal domain
species: Pelobacter acidigallici [TaxId: 35816]

Probab=94.82  E-value=0.025  Score=38.10  Aligned_cols=48  Identities=29%  Similarity=0.337  Sum_probs=36.0

Q ss_pred             ceEEEEEEEccCCCCCccccCcEEEEEecCCCceeeEEecCCceEEEE-cCCCCc
Q 030378           26 HEVLKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMATTQVSGSFKVN-LPSDAA   79 (178)
Q Consensus        26 ~fvV~GkV~CddC~~~~~isGakV~v~C~~~k~~~~a~TD~~G~FkV~-lp~~~~   79 (178)
                      .|+|.|.|-     .|=-++||+|.|.= +.+....++||++|.|+++ |+...+
T Consensus         2 n~~~~gi~~-----~G~~v~gA~V~L~~-~~~~v~~t~Td~~G~F~f~~l~~G~Y   50 (79)
T d1vlfn1           2 NYVTAGILV-----QGDCFEGAKVVLKS-GGKEVASAETNFFGEFKFDALDNGEY   50 (79)
T ss_dssp             EEEEEEEEE-----TTEECTTCEEEEEE-TTEEEEEEECCTTSEEEEEEECSEEE
T ss_pred             CcEEeeEEE-----CCccccccEEEEEC-CCCeEEeeEECCCCcEEEEecCCCCE
Confidence            378888874     36679999999963 2223356899999999997 676655

>d1uwya1 b.3.2.1 (A:297-403) Carboxypeptidase M C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Prealbumin-like
superfamily: Carboxypeptidase regulatory domain-like
family: Carboxypeptidase regulatory domain
domain: Carboxypeptidase M C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.92  E-value=0.1  Score=35.76  Aligned_cols=46  Identities=28%  Similarity=0.299  Sum_probs=35.3

Q ss_pred             EEEEEEccCCCCCccccCcEEEEEecCCCceeeEEecCCceEEEEcCCCCc
Q 030378           29 LKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMATTQVSGSFKVNLPSDAA   79 (178)
Q Consensus        29 V~GkV~CddC~~~~~isGakV~v~C~~~k~~~~a~TD~~G~FkV~lp~~~~   79 (178)
                      |+|+|.  | ..|--|.||.|.|  ++.+....++||++|.|.+.++....
T Consensus         2 I~G~V~--D-~~g~pi~~A~V~i--~~~~~~~~~~td~~G~f~~~~~~g~Y   47 (107)
T d1uwya1           2 VKGQVF--D-QNGNPLPNVIVEV--QDRKHICPYRTNKYGEYYLLLLPGSY   47 (107)
T ss_dssp             EEEEEE--C-TTSCBCCSCEEEE--TTCCCSSCCBCCTTCEEEECCCSEEE
T ss_pred             cEEEEE--C-CCCCCcCcEEEEE--EcccccceeecchhheeeeecCCccE
Confidence            789996  5 5677899999998  44444445789999999888877644

>d1h8la1 b.3.2.1 (A:305-383) Carboxypeptidase D C-terminal domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]}

class: All beta proteins
fold: Prealbumin-like
superfamily: Carboxypeptidase regulatory domain-like
family: Carboxypeptidase regulatory domain
domain: Carboxypeptidase D C-terminal domain
species: Crested duck (Lophonetta specularioides) [TaxId: 8836]

Probab=91.34  E-value=0.21  Score=32.24  Aligned_cols=45  Identities=18%  Similarity=0.117  Sum_probs=32.3

Q ss_pred             EEEEEEccCCCCCccccCcEEEEEecCCCceeeEEecCCceEEEEcCCCCc
Q 030378           29 LKGKVSCSDCSNDYDLSGVKVLVKCNHLKKLAMATTQVSGSFKVNLPSDAA   79 (178)
Q Consensus        29 V~GkV~CddC~~~~~isGakV~v~C~~~k~~~~a~TD~~G~FkV~lp~~~~   79 (178)
                      |+|+|.  |=..+--|+||.|.++    .....++||++|.|.+.||....
T Consensus         2 I~G~V~--d~~tg~pi~~a~V~v~----~~~~~~~Td~~G~f~~~l~~G~y   46 (79)
T d1h8la1           2 IWGFVL--DATDGRGILNATISVA----DINHPVTTYKDGDYWRLLVQGTY   46 (79)
T ss_dssp             EEEEEE--ETTTCSBCTTCEEEET----TEEEEEECCTTSEEEECCCSEEE
T ss_pred             cEEEEE--ECCCCCCcCCeEEEEe----CccccEEecCCCCEEEEeecccE
Confidence            566665  2223567999999984    33456889999999988887544

>d2p5zx1 b.40.8.1 (X:378-468) Hypothetical protein c3393 {Escherichia coli o6 [TaxId: 217992]}

class: All beta proteins
fold: OB-fold
superfamily: gp5 N-terminal domain-like
family: gp4 N-terminal domain-like
domain: Hypothetical protein c3393
species: Escherichia coli o6 [TaxId: 217992]

Probab=83.95  E-value=0.47  Score=32.73  Aligned_cols=51  Identities=18%  Similarity=0.120  Sum_probs=28.0

Q ss_pred             cCcEEEEEecCCCceeeEEecCCceEEEEcCCCCccCCCCCCcceEEEccC
Q 030378           45 SGVKVLVKCNHLKKLAMATTQVSGSFKVNLPSDAAMKTPSPLHCHAKLFGG   95 (178)
Q Consensus        45 sGakV~v~C~~~k~~~~a~TD~~G~FkV~lp~~~~~~~~~~~~C~akLl~s   95 (178)
                      .|.-.++-......-..+.+|+.|.|+|.++-+....++..+-|++|+...
T Consensus         5 ~G~~~A~V~~~~~~e~~a~~D~~GRvrVrf~wd~~~~~~~~~S~w~Rv~~p   55 (91)
T d2p5zx1           5 AGTLPARVTSTVKNDIYAHIDKDGRYRVNLDFDRDTWKPGYESLWVRQSRP   55 (91)
T ss_dssp             CSCEEEEECC----CCSCCBCTTCCEEEECCC-CCCBCTTCCEEEEC----
T ss_pred             ccceEEEEECCCCceeeeeeCCCCeEEEEEccccCCCCCCcccEEeeeecC
Confidence            344334333333333346789999999999977654344556799988753