Citrus Sinensis ID: 030409

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
Protein Sequence
MGIGLWFNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRSRCHAPSVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLSIAHALLGWLVATPFILTALYLVLLPVFKILVRKFSSAALSSKKELHSYSEIKLKVRDA
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mgiglwfnKRIVEPLLQILrrgaepnqlAFSTALGitlglfpiCGAAVFLCGMAIAALRSRCHAPSVMLANFIATPIELSLVVPflrfgealtggphfplnsDALKRVLTGKASQEVLLSIAHALLGWLVATPFILTALYLVLLPVFKILVRKFSSAALSSKKELHSYSEIKLKVRDA
Flexible Loop (DISEMBL)
mgiglwfnKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRSRCHAPSVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLSIAHALLGWLVATPFILTALYLVLLPVFKILVRKFSSaalsskkelhsyseiklkvrda
Low Complexity Region (SEG)
MGIGLWFNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRSRCHAPSVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLSIAHALLGWLVATPFILTALYLVLLPVFKILVRKFSSAALSSKKELHSYSEIKLKVRDA
Disordered region (IsUnstruct)
**IGLWFNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRSRCHAPSVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLSIAHALLGWLVATPFILTALYLVLLPVFKILVRKFSS**********************
Disordered Region (DISOPRED)
*GIGLWFNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRSRCHAPSVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLSIAHALLGWLVATPFILTALYLVLLPVFKIL****************************
Disordered Region (DISEMBL)
MGIGLWFNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRSRCHAPSVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLSIAHALLGWLVATPFILTALYLVLLPVFKILVRKFSSAALSSKKELHSYSEIKLKVRDA
Disordered Region (DISPRO)
*GIGLWFNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRSRCHAPSVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLSIAHALLGWLVATPFILTALYLVLLPVFKILVRKFS***********************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGIGLWFNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRSRCHAPSVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLSIAHALLGWLVATPFILTALYLVLLPVFKILVRKFSSAALSSKKELHSYSEIKLKVRDA
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
225459985	185	PREDICTED: uncharacterized protein LOC10	0.994	0.956	0.757	1e-72
388509988	184	unknown [Lotus japonicus]	0.994	0.961	0.747	3e-71
388520271	179	unknown [Lotus japonicus]	0.994	0.988	0.747	3e-71
351721344	176	uncharacterized protein LOC100305584 [Gl	0.966	0.977	0.773	5e-71
388497588	183	unknown [Medicago truncatula]	0.994	0.967	0.723	1e-69
449441776	184	PREDICTED: uncharacterized protein LOC10	0.966	0.934	0.767	2e-69
255561476	183	conserved hypothetical protein [Ricinus	0.994	0.967	0.723	3e-69
224074029	183	predicted protein [Populus trichocarpa]	0.994	0.967	0.728	3e-68
224124400	175	predicted protein [Populus trichocarpa]	0.966	0.982	0.720	4e-67
18413303	183	uncharacterized protein [Arabidopsis tha	0.971	0.945	0.693	3e-63

>gi|225459985|ref|XP_002269541.1| PREDICTED: uncharacterized protein LOC100248177 [Vitis vinifera] gi|297734771|emb|CBI17005.3| unnamed protein product [Vitis vinifera]

 Score =  277 bits (709), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 134/177 (75%), Positives = 151/177 (85%)

Query: 1   MGIGLWFNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRS 60
           +G+G WFNK+IV+PLLQILRRGAEP QLAFS ALGITLG+FPICG  VFLCGMAIA L S
Sbjct: 8   IGVGPWFNKKIVDPLLQILRRGAEPKQLAFSAALGITLGVFPICGVTVFLCGMAIALLGS 67

Query: 61  RCHAPSVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLS 120
            CH+PSVMLANFIATPIELSLVVPFLRFGE ++GGPHFPL SDA+K+VLTG AS+EVLLS
Sbjct: 68  LCHSPSVMLANFIATPIELSLVVPFLRFGEVISGGPHFPLTSDAMKKVLTGHASREVLLS 127

Query: 121 IAHALLGWLVATPFILTALYLVLLPVFKILVRKFSSAALSSKKELHSYSEIKLKVRD 177
           I HALLGWLVA PFIL  LY++ LP  K+LVRKFS    S KK +H + E+KLKVRD
Sbjct: 128 IVHALLGWLVAAPFILVILYIIFLPCCKLLVRKFSPVPSSPKKPVHPHMEVKLKVRD 184

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388509988|gb|AFK43060.1| unknown [Lotus japonicus]

 Score =  273 bits (697), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 133/178 (74%), Positives = 152/178 (85%), Gaps = 1/178 (0%)

Query: 1   MGIGLWFNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRS 60
           MGI  WF+++I +PLL I+RRGAEPNQLAFS ALGIT G+FPICG  VFLC MAIA L S
Sbjct: 6   MGITDWFHRKITDPLLSIIRRGAEPNQLAFSAALGITFGVFPICGVTVFLCAMAIALLGS 65

Query: 61  RCHAPSVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLS 120
            CHAP+VMLANF+ATPIELSLVVPFLRFGE ++GGPHFPL SDALK+V TG+AS+EVLLS
Sbjct: 66  YCHAPTVMLANFVATPIELSLVVPFLRFGEVISGGPHFPLTSDALKKVFTGQASREVLLS 125

Query: 121 IAHALLGWLVATPFILTALYLVLLPVFKILVRKFSSAALSSKKE-LHSYSEIKLKVRD 177
           +AHALLGWLVA+PFIL  LY+VLLP FK LV+KFS+  LS KK  LH +SEI LKVRD
Sbjct: 126 VAHALLGWLVASPFILGTLYIVLLPCFKFLVQKFSTVPLSPKKPLLHPHSEINLKVRD 183

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388520271|gb|AFK48197.1| unknown [Lotus japonicus]

 Score =  272 bits (696), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 133/178 (74%), Positives = 152/178 (85%), Gaps = 1/178 (0%)

Query: 1   MGIGLWFNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRS 60
           MGI  WF+++I +PLL I+RRGAEPNQLAFS ALGIT G+FPICG  VFLC MAIA L S
Sbjct: 1   MGITDWFHRKITDPLLSIIRRGAEPNQLAFSAALGITFGVFPICGVTVFLCAMAIALLGS 60

Query: 61  RCHAPSVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLS 120
            CHAP+VMLANF+ATPIELSLVVPFLRFGE ++GGPHFPL SDALK+V TG+AS+EVLLS
Sbjct: 61  YCHAPTVMLANFVATPIELSLVVPFLRFGEVISGGPHFPLTSDALKKVFTGQASREVLLS 120

Query: 121 IAHALLGWLVATPFILTALYLVLLPVFKILVRKFSSAALSSKKE-LHSYSEIKLKVRD 177
           +AHALLGWLVA+PFIL  LY+VLLP FK LV+KFS+  LS KK  LH +SEI LKVRD
Sbjct: 121 VAHALLGWLVASPFILGTLYIVLLPCFKFLVQKFSTVPLSPKKPLLHPHSEISLKVRD 178

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721344|ref|NP_001237462.1| uncharacterized protein LOC100305584 [Glycine max] gi|255625983|gb|ACU13336.1| unknown [Glycine max]

 Score =  272 bits (695), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 133/172 (77%), Positives = 149/172 (86%)

Query: 6   WFNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRSRCHAP 65
           W  K+I +PLL I+RRGAEPN LAFS ALG+TLGLFPICG  VFLCGMAIA L S CHAP
Sbjct: 4   WVQKKITDPLLSIIRRGAEPNHLAFSAALGVTLGLFPICGVTVFLCGMAIALLGSFCHAP 63

Query: 66  SVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLSIAHAL 125
           +VMLANFIATPIELSLVVPFLRFGE ++GG HFPL SDALK+VLTG+AS+EVLLS+AHAL
Sbjct: 64  TVMLANFIATPIELSLVVPFLRFGEVISGGSHFPLTSDALKKVLTGQASREVLLSVAHAL 123

Query: 126 LGWLVATPFILTALYLVLLPVFKILVRKFSSAALSSKKELHSYSEIKLKVRD 177
           LGWLVA+PFIL  LY+VLLP FKILV KFSS  LS KK L+ +SE+KLKVRD
Sbjct: 124 LGWLVASPFILGTLYIVLLPCFKILVHKFSSVPLSPKKPLNPHSEVKLKVRD 175

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388497588|gb|AFK36860.1| unknown [Medicago truncatula]

 Score =  267 bits (682), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 128/177 (72%), Positives = 150/177 (84%)

Query: 1   MGIGLWFNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRS 60
           M I  WF K+I +PL+ IL RGAEPNQLAFS ALGITLG+FPICG  VFLCGMAIA L S
Sbjct: 6   MAITNWFQKKITDPLVPILHRGAEPNQLAFSAALGITLGVFPICGVTVFLCGMAIALLGS 65

Query: 61  RCHAPSVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLS 120
            CHAP++ML NF+ATPIELSL+VPFLRFGE ++GGPHFPL SDALK+VLTG+AS EV+LS
Sbjct: 66  YCHAPTMMLTNFMATPIELSLIVPFLRFGEFMSGGPHFPLTSDALKKVLTGQASHEVILS 125

Query: 121 IAHALLGWLVATPFILTALYLVLLPVFKILVRKFSSAALSSKKELHSYSEIKLKVRD 177
           + HAL GWL A+PFIL ALY+V LP+F+ILV+KFSS  LS KK L S+SE++LKVRD
Sbjct: 126 VVHALYGWLAASPFILGALYIVFLPLFRILVQKFSSVPLSPKKPLLSHSELRLKVRD 182

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441776|ref|XP_004138658.1| PREDICTED: uncharacterized protein LOC101220662 [Cucumis sativus] gi|449525081|ref|XP_004169548.1| PREDICTED: uncharacterized protein LOC101224137 [Cucumis sativus]

 Score =  266 bits (680), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 132/172 (76%), Positives = 146/172 (84%)

Query: 6   WFNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRSRCHAP 65
           WFN++IV+PLLQIL+RGAEP QLAFS ALGITLGLFPICG  VFLCG AIA L S CHAP
Sbjct: 12  WFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFAIAFLGSLCHAP 71

Query: 66  SVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLSIAHAL 125
           +VMLANFIATPIELSLVVPFLRFGEA++GGP FP   DALK+V TG+AS EVLLSIAH L
Sbjct: 72  TVMLANFIATPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGEASHEVLLSIAHLL 131

Query: 126 LGWLVATPFILTALYLVLLPVFKILVRKFSSAALSSKKELHSYSEIKLKVRD 177
           LGWLVA PFIL   YL+ LP FKILVRKFS+ A S KK  HS+++IKLKVRD
Sbjct: 132 LGWLVAAPFILGIGYLLFLPCFKILVRKFSTVASSPKKPPHSHTDIKLKVRD 183

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255561476|ref|XP_002521748.1| conserved hypothetical protein [Ricinus communis] gi|223538961|gb|EEF40558.1| conserved hypothetical protein [Ricinus communis]

 Score =  266 bits (679), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 128/177 (72%), Positives = 147/177 (83%)

Query: 1   MGIGLWFNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRS 60
           +G+  WF+K+IV+PL QIL RG EP QLAFS ALGITLG+FPICG  V LCGMAIA L S
Sbjct: 6   IGMNAWFSKKIVDPLYQILSRGTEPKQLAFSAALGITLGVFPICGVTVLLCGMAIAMLGS 65

Query: 61  RCHAPSVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLS 120
            CHAPSVMLANF+ATPIELSLVVPFLRFGE ++GGPHFPL SDA K+VLTG+AS EVLLS
Sbjct: 66  LCHAPSVMLANFVATPIELSLVVPFLRFGELISGGPHFPLTSDAFKKVLTGQASHEVLLS 125

Query: 121 IAHALLGWLVATPFILTALYLVLLPVFKILVRKFSSAALSSKKELHSYSEIKLKVRD 177
           I HAL+GWLVA PFIL ALY++ LP FK+LVRKFSS   S  K   S++E++LKVRD
Sbjct: 126 ILHALMGWLVAAPFILAALYIIFLPCFKVLVRKFSSGPGSPIKSPTSFTEVRLKVRD 182

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224074029|ref|XP_002304222.1| predicted protein [Populus trichocarpa] gi|222841654|gb|EEE79201.1| predicted protein [Populus trichocarpa]

 Score =  263 bits (671), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 129/177 (72%), Positives = 148/177 (83%)

Query: 1   MGIGLWFNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRS 60
           MG   W +K+IV+PL QILRRG EP QLAFSTALGI LG+FPICG  V LCG+AIA L S
Sbjct: 6   MGFLAWLDKKIVDPLYQILRRGLEPKQLAFSTALGIALGIFPICGVTVLLCGLAIALLGS 65

Query: 61  RCHAPSVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLS 120
            CHAP+V+LANFIATPIELSLVVPFLRFGE ++GGP FPL SDALK+VLTG+AS+EV+LS
Sbjct: 66  LCHAPTVLLANFIATPIELSLVVPFLRFGEVMSGGPPFPLTSDALKKVLTGQASREVILS 125

Query: 121 IAHALLGWLVATPFILTALYLVLLPVFKILVRKFSSAALSSKKELHSYSEIKLKVRD 177
           IAHALLGWLVA PFIL ALY++ LP FK+LV KFS+   S KK  +S +EIKLKVRD
Sbjct: 126 IAHALLGWLVAAPFILAALYIIFLPCFKVLVHKFSTVPSSPKKPSNSLAEIKLKVRD 182

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124400|ref|XP_002319322.1| predicted protein [Populus trichocarpa] gi|222857698|gb|EEE95245.1| predicted protein [Populus trichocarpa]

 Score =  259 bits (661), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 124/172 (72%), Positives = 144/172 (83%)

Query: 6   WFNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRSRCHAP 65
           WFNK IV+PL QILRRG EP QLA STALGITLG+FPICG  V LCG+AIA L S CHAP
Sbjct: 3   WFNKSIVDPLYQILRRGLEPKQLALSTALGITLGIFPICGVTVLLCGVAIALLGSLCHAP 62

Query: 66  SVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLSIAHAL 125
           +VMLANFIATP+ELSLVVPF+RFGE ++GGPHFPL SDALK+V TG+AS+EV+LS+AHAL
Sbjct: 63  TVMLANFIATPLELSLVVPFVRFGEVMSGGPHFPLTSDALKKVFTGQASREVILSVAHAL 122

Query: 126 LGWLVATPFILTALYLVLLPVFKILVRKFSSAALSSKKELHSYSEIKLKVRD 177
           LGWLVA PFIL ALY++ LP FK+LV KFS+     KK  +S +E+KLK RD
Sbjct: 123 LGWLVAAPFILAALYIIFLPCFKVLVHKFSTVPSGPKKSPNSLAEVKLKGRD 174

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18413303|ref|NP_567353.1| uncharacterized protein [Arabidopsis thaliana] gi|4538978|emb|CAB39766.1| hypothetical protein [Arabidopsis thaliana] gi|7267710|emb|CAB78137.1| hypothetical protein [Arabidopsis thaliana] gi|21555511|gb|AAM63876.1| unknown [Arabidopsis thaliana] gi|332657447|gb|AEE82847.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  246 bits (627), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 120/173 (69%), Positives = 135/173 (78%)

Query: 6   WFNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRSRCHAP 65
           WFNK+I +PLLQILRRG EP QLAFS ALGITLG+FPICG  V LCG+A A L S CHAP
Sbjct: 11  WFNKKITDPLLQILRRGTEPKQLAFSAALGITLGIFPICGVPVLLCGVAFALLGSSCHAP 70

Query: 66  SVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLSIAHAL 125
           +VMLAN IATP+EL+LVVPFLR GE +TGGPHFPL SDALK+V TG+ASQEV LSI +AL
Sbjct: 71  TVMLANIIATPVELALVVPFLRLGEKVTGGPHFPLTSDALKKVFTGQASQEVFLSIGNAL 130

Query: 126 LGWLVATPFILTALYLVLLPVFKILVRKFSSAALSSKKELHSYSEIKLKVRDA 178
           LGWLVATPF    LY+VLLP F ILVRKF   A + K      +E+  K RDA
Sbjct: 131 LGWLVATPFFFITLYVVLLPCFTILVRKFGGVASTQKLPTSMETELNPKPRDA 183

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
TAIR|locus:2124690	183	AT4G10140 "AT4G10140" [Arabido	0.971	0.945	0.693	3.9e-60
TAIR|locus:2007018	175	AT1G33490 "AT1G33490" [Arabido	0.887	0.902	0.727	6.4e-60

TAIR|locus:2124690 AT4G10140 "AT4G10140" [Arabidopsis thaliana (taxid:3702)]

 Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
 Identities = 120/173 (69%), Positives = 135/173 (78%)

Query:     6 WFNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRSRCHAP 65
             WFNK+I +PLLQILRRG EP QLAFS ALGITLG+FPICG  V LCG+A A L S CHAP
Sbjct:    11 WFNKKITDPLLQILRRGTEPKQLAFSAALGITLGIFPICGVPVLLCGVAFALLGSSCHAP 70

Query:    66 SVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLSIAHAL 125
             +VMLAN IATP+EL+LVVPFLR GE +TGGPHFPL SDALK+V TG+ASQEV LSI +AL
Sbjct:    71 TVMLANIIATPVELALVVPFLRLGEKVTGGPHFPLTSDALKKVFTGQASQEVFLSIGNAL 130

Query:   126 LGWLVATPFILTALYLVLLPVFKILVRKFSSAALSSKKELHSYSEIKLKVRDA 178
             LGWLVATPF    LY+VLLP F ILVRKF   A + K      +E+  K RDA
Sbjct:   131 LGWLVATPFFFITLYVVLLPCFTILVRKFGGVASTQKLPTSMETELNPKPRDA 183

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2007018 AT1G33490 "AT1G33490" [Arabidopsis thaliana (taxid:3702)]

 Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
 Identities = 115/158 (72%), Positives = 137/158 (86%)

Query:     5 LWFNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRSRCHA 64
             +WF+K+I EPL+QILRRGAEP QLAFS ALGIT+G+FPICG  V LCG+AIA+L S CHA
Sbjct:    10 VWFDKKISEPLIQILRRGAEPKQLAFSAALGITMGVFPICGVTVLLCGVAIASLGSLCHA 69

Query:    65 PSVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLSIAHA 124
             P+VMLANFIATPIELSLVVPFLR GE +TGGPHFPL SDALK+V TG+AS++V LSI +A
Sbjct:    70 PTVMLANFIATPIELSLVVPFLRLGEKITGGPHFPLTSDALKKVFTGQASRDVFLSIGNA 129

Query:   125 LLGWLVATPFILTALYLVLLPVFKILVRKFSSAALSSK 162
             LLGWL+A PF++ ALY++ LP FKILVRKFSS   ++K
Sbjct:   130 LLGWLIAAPFVIVALYIMFLPCFKILVRKFSSVDSTAK 167


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.327   0.141   0.418    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      178       178   0.00086  109 3  11 22  0.47    31
                                                     31  0.39    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  568 (60 KB)
  Total size of DFA:  131 KB (2083 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.44u 0.10s 16.54t   Elapsed:  00:00:02
  Total cpu time:  16.44u 0.10s 16.54t   Elapsed:  00:00:02
  Start:  Sat May 11 00:05:24 2013   End:  Sat May 11 00:05:26 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00032005001 SubName- Full=Chromosome chr18 scaffold_61, whole genome shotgun sequence; (185 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	178
PF09835	154	DUF2062: Uncharacterized protein conserved in bact	99.95
TIGR03546	154	conserved hypothetical protein TIGR03546. Members	99.92
COG3216	184	Uncharacterized protein conserved in bacteria [Fun	99.89
PF09835	154	DUF2062: Uncharacterized protein conserved in bact	95.62
PF01970	419	TctA: Tripartite tricarboxylate transporter TctA f	85.03

>PF09835 DUF2062: Uncharacterized protein conserved in bacteria (DUF2062); InterPro: IPR018639 This domain, found in various prokaryotic proteins, has no known function

Probab=99.95  E-value=4.3e-27  Score=185.67  Aligned_cols=145  Identities=22%  Similarity=0.374  Sum_probs=118.8

Q ss_pred             HHhhHHHHHHHHhcCCCHHHHHHHHHHHhhhhccccchHHHHHHHHHHHHHHhccCHHHHHHHHHhhhhhhHHHHHHH-H
Q 030409            8 NKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRSRCHAPSVMLANFIATPIELSLVVPF-L   86 (178)
Q Consensus         8 ~~~i~~~ll~iLr~~~sP~~iA~s~AlGvfiGi~P~~G~~t~l~~~la~~l~~RlN~~aa~~~~~i~~Pl~~~li~pf-~   86 (178)
                      .|.+++.++++++++.||+++|.|+|+|+|+|++|++|+|+++|+++|+++  |+|+++++++++++||+|+++++++ +
T Consensus         2 ~R~~~~~~~~~l~~~~~p~~iA~g~AiG~fig~~P~~g~~~~l~~~la~~~--r~N~~aa~~~~~i~nPlt~~~i~~~~y   79 (154)
T PF09835_consen    2 KRRFRYRLLRLLRWGGSPHSIALGFAIGVFIGFLPIFGLQTVLAIALALLF--RLNKPAAILGTWISNPLTIPPIYPLSY   79 (154)
T ss_pred             ccHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH--HccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            457888899999999999999999999999999999999999999999988  9999999999999999999999885 8


Q ss_pred             HHHHHHhcCCCCCCCHH---HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 030409           87 RFGEALTGGPHFPLNSD---ALKRVLTGKASQEVLLSIAHALLGWLVATPFILTALYLVLLPVFKILVRKF  154 (178)
Q Consensus        87 ~~G~~l~g~~~~~l~~~---~l~~~l~~~~~~~~~~~~~~Al~gwlv~ap~~~~~~Y~l~~p~~k~l~~k~  154 (178)
                      ++|++++|.+..++...   +...+-..+..+.+.......++|+++.+++.+++.|++.+++.++.++|-
T Consensus        80 ~vG~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~i~~~v~~~i~Y~l~~~~~~~~r~~r  150 (154)
T PF09835_consen   80 RVGSFLLGGPPEEFAALFEFDWSLMHWSDLLESLWEFGLPFLLGSLILGIVLGIISYFLVYFLVRKYRKRR  150 (154)
T ss_pred             HHHHHHhCCChhhhhhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999886111100   000000011123445556677899999999999999999999999997764

It is found at the C-terminal of family 2 glycosyltransferase proteins, in addition to proteins of unknown function.

>TIGR03546 conserved hypothetical protein TIGR03546

Probab=99.92  E-value=2e-24  Score=173.16  Aligned_cols=139  Identities=17%  Similarity=0.233  Sum_probs=114.3

Q ss_pred             hHHHHHHHHhcCCCHHHHHHHHHHHhhhhccccchHHHHHHHHHHHHHHhccCHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 030409           11 IVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRSRCHAPSVMLANFIATPIELSLVVPFLRFGE   90 (178)
Q Consensus        11 i~~~ll~iLr~~~sP~~iA~s~AlGvfiGi~P~~G~~t~l~~~la~~l~~RlN~~aa~~~~~i~~Pl~~~li~pf~~~G~   90 (178)
                      ...+++|++|+++||++||.|+|+|+|+|++|++|+|+++++++|+++  |+|+.++.++++++||+++++.+..+++|+
T Consensus         2 ~l~k~lk~l~~~~tP~~iA~g~a~Gvf~g~~P~~glh~~~~~~la~~l--r~N~~~a~l~t~v~nplty~l~~~s~~~G~   79 (154)
T TIGR03546         2 LLFSLFKALNSNTSPAQLALAVALGMILGLTPFLNLHNIALLFLVLIL--RVNLGAFILSAILFSGLAYLLDPISDQVGE   79 (154)
T ss_pred             hHHHHHHHHcCCCCHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH--HhHHHHHHHHHHHcCcchhhhHHHHHHHHH
Confidence            355788999999999999999999999999999999999999999999  999999999999999999977566799999


Q ss_pred             HHhcCCCCCCCHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 030409           91 ALTGGPHFPLNSDALKRVLTGK--ASQEVLLSIAHALLGWLVATPFILTALYLVLLPVFKILVRKFSSA  157 (178)
Q Consensus        91 ~l~g~~~~~l~~~~l~~~l~~~--~~~~~~~~~~~Al~gwlv~ap~~~~~~Y~l~~p~~k~l~~k~~~~  157 (178)
                      +++|.+..+   +.++.+.+..  ...++.+++   ++|+++.+-+.+.++|++.+|+.++.|+|..+.
T Consensus        80 ~lL~~~~~~---~~~~~l~~~~~~~l~~f~~tl---~~Gg~l~Gli~~~~~Y~ls~~lI~~Yr~~~~~~  142 (154)
T TIGR03546        80 WLLEQESLQ---PVFTALYNTPLVPLARFNNTI---VMGSFVVGLILLPPAFAISKVIIAKYRKRIVAW  142 (154)
T ss_pred             HHhCCCCcc---hHHHHHHhCcHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999976322   1233333111  234555555   788999999899999999999988888876543

Members of this family are uncharacterized proteins, usually encoded by a gene adjacent to a member of family TIGR03545, which is also uncharacterized.

>COG3216 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.89  E-value=1.1e-22  Score=165.64  Aligned_cols=142  Identities=18%  Similarity=0.215  Sum_probs=119.8

Q ss_pred             HHHhhHHHHHHHHhcCCCHHHHHHHHHHHhhhhccccchHHHHHHHHHHHHHHhccCHHHHHHHHHhhhhhhHHHHHHH-
Q 030409            7 FNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRSRCHAPSVMLANFIATPIELSLVVPF-   85 (178)
Q Consensus         7 ~~~~i~~~ll~iLr~~~sP~~iA~s~AlGvfiGi~P~~G~~t~l~~~la~~l~~RlN~~aa~~~~~i~~Pl~~~li~pf-   85 (178)
                      |+|..++-.+++||...|||.+|.++|.|+|.+++|++|+|++++..+|+.+  |.|++++.++++++||+|+|+++.+ 
T Consensus        25 ~sr~~ry~~~riLrl~atphsvA~gvAaG~faaf~Pf~g~h~iiAa~La~~l--~gNl~aAa~~t~l~NPlT~P~I~~~t  102 (184)
T COG3216          25 FSRSGRYLYKRILRLLATPHSVAAGVAAGVFAAFFPFFGLHMIIAAVLAIVL--RGNLVAAALGTWLANPLTMPFIWGAT  102 (184)
T ss_pred             HHHHHHHHhhhhhhhcCCchHHHHHHHHHHHHHhcccchHHHHHHHHHHHHH--hccHHHHHHHhHhcCCcccceeeeee
Confidence            6777888999999999999999999999999999999999999999999999  9999999999999999999999876 


Q ss_pred             HHHHHHHhcCCCCCCCHHHHHHHHhhhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030409           86 LRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLSIA-HALLGWLVATPFILTALYLVLLPVFKIL  150 (178)
Q Consensus        86 ~~~G~~l~g~~~~~l~~~~l~~~l~~~~~~~~~~~~~-~Al~gwlv~ap~~~~~~Y~l~~p~~k~l  150 (178)
                      +++|.++++.+..+.-.+++..+++.+-..++|.-++ ..++|.++++.+.+++.|.+.+.-+.++
T Consensus       103 yelG~~ll~~~~~s~~~~~l~~~~~~~el~~lw~P~l~pm~vgav~~~a~~~ll~y~~~r~~v~~f  168 (184)
T COG3216         103 YELGAWLLQRPAQSVGPVHLTWMWQSLELSSLWGPVLKPMLVGAVPAGAIGGLLFYGLTRYSVTRF  168 (184)
T ss_pred             HhhhhHHhcCCCCCCCchHHHHHHHHhHHHHhcchHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999876655567777776655677776554 5556666666666666776666665555

>PF09835 DUF2062: Uncharacterized protein conserved in bacteria (DUF2062); InterPro: IPR018639 This domain, found in various prokaryotic proteins, has no known function

Probab=95.62  E-value=0.096  Score=41.10  Aligned_cols=35  Identities=11%  Similarity=0.019  Sum_probs=20.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030409          119 LSIAHALLGWLVATPFILTALYLVLLPVFKILVRK  153 (178)
Q Consensus       119 ~~~~~Al~gwlv~ap~~~~~~Y~l~~p~~k~l~~k  153 (178)
                      ..++++++-..+++++...++|.+..-++|+-+||
T Consensus       119 ~~~~G~~i~~~v~~~i~Y~l~~~~~~~~r~~r~~~  153 (154)
T PF09835_consen  119 PFLLGSLILGIVLGIISYFLVYFLVRKYRKRRRKR  153 (154)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            33444445556666666667777776666665543

It is found at the C-terminal of family 2 glycosyltransferase proteins, in addition to proteins of unknown function.

>PF01970 TctA: Tripartite tricarboxylate transporter TctA family; InterPro: IPR002823 Members of this prokaryotic family have no known function

Probab=85.03  E-value=28  Score=32.19  Aligned_cols=35  Identities=14%  Similarity=0.226  Sum_probs=27.9

Q ss_pred             HHHHHHHHhhhhccccchHHHHHHHHHHHHHHhccCH
Q 030409           28 LAFSTALGITLGLFPICGAAVFLCGMAIAALRSRCHA   64 (178)
Q Consensus        28 iA~s~AlGvfiGi~P~~G~~t~l~~~la~~l~~RlN~   64 (178)
                      +..++.+|+++|..|=++.++.+++.+...+  -++.
T Consensus         5 ~~~Gv~~G~i~G~iPGl~~~~~ialllp~t~--~l~p   39 (419)
T PF01970_consen    5 ILLGVLLGIIIGAIPGLHPTMAIALLLPFTF--SLDP   39 (419)
T ss_pred             HHHHHHHHHHhhccCCCCHHHHHHHHHHHhc--ccCH
Confidence            5689999999999998888888887777655  4444

Members are predicted to be integral membrane proteins and are similar to a protein in a tartrate utilisation region (TAR) of Agrobacterium vitis a common pathogen of grapevine. Most grapevine strains utilise tartrate, an abundant compound in grapevine [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	178
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 38.7 bits (89), Expect = 6e-04
 Identities = 37/204 (18%), Positives = 59/204 (28%), Gaps = 77/204 (37%)

Query: 7   FNKRIV---EPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGM--------AI 55
           F K  V   +P L+ LR            AL   L L P     V + G+        A+
Sbjct: 126 FAKYNVSRLQPYLK-LR-----------QAL---LELRP--AKNVLIDGVLGSGKTWVAL 168

Query: 56  AALRS-----------------RCHAPSV---MLANFIATPIELSLVVPFLRFGEALTGG 95
               S                  C++P     ML   +       +   +    +  +  
Sbjct: 169 DVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLL-----YQIDPNWTSRSDHSSNI 223

Query: 96  PHFPLNS--DALKRVLTGKASQEVLLSIAHALLGWLVATPFILTALYLVLLPVF----KI 149
               ++S    L+R+L  K  +  LL + +      V       A        F    KI
Sbjct: 224 KL-RIHSIQAELRRLLKSKPYENCLLVLLN------VQNAKAWNA--------FNLSCKI 268

Query: 150 LV--RKFSSA-ALSSKKELHSYSE 170
           L+  R       LS+    H   +
Sbjct: 269 LLTTRFKQVTDFLSAATTTHISLD 292

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00