Citrus Sinensis ID: 030495

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170------
Protein Sequence
MMSATILSSSSCNLIRSSGKQIPSHPKPFLGDGQRILNQLVAKRNPSYHAFQNKKLPHRFSVFAVTEGSAKSSESEETIPSWAKPDSDEPPPWATDEGKGLTSQGSFEIPFYVYLLTSTITAIAAIGSIFEYVNKNPVFGILNSDSIFYAPLLGFFAFTGFPTSRSIGPERCYSFN
Secondary Structure (PSIPRED)
cccccccccccccHHHcccccccccccccccccHHHHHHcccccccccHHHcccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcEEEEEccccEEEEccccccHHHHHHHEEEEEccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEcccccHHHHHccccccccccccccccccEccccccccccccHHHcccccccccEEEEEEEcccccccccccccccccccccccccccHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccHcHcHHEEEEEEcccccccccccccccccc
Coil and Loop (DISEMBL)
mmsatilsssSCNLirssgkqipshpkpflgdGQRILNQLVakrnpsyhafqnkklphrfsVFAVtegsaksseseetipswakpdsdepppwatdegkgltsqgsfeiPFYVYLLTSTITAIAAIGSIFeyvnknpvfgilnsdsifyapllgffaftgfptsrsigpercysfn
Flexible Loop (DISEMBL)
MMSATILSSSSCNLIRSSGKQIPSHPKPFLGDGQRILNQLVAKRNPSYHafqnkklphrFSVFAVTegsaksseseetipswakpdsdepppWATDEGKGLTSQGSFEIPFYVYLLTSTITAIAAIGSIFEYVNKNPVFGILNSDSIFYAPLLGFFAFTGfptsrsigpercysfn
Low Complexity Region (SEG)
MMSATilsssscnlirssGKQIPSHPKPFLGDGQRILNQLVAKRNPSYHAFQNKKLPHRFSVFAVTEGSAKSSESEETIPSWAKPDSDEPPPWATDEGKGLTSQGSFEIPFYVYLLtstitaiaaiGSIFEYVNKNPVFGILNSDSIFYAPLLGFFAFTGFPTSRSIGPERCYSFN
Disordered region (IsUnstruct)
**********************************RILNQLVAKRNPSYHAFQNKKLPHRFSVFAV***************************************GSFEIPFYVYLLTSTITAIAAIGSIFEYVNKNPVFGILNSDSIFYAPLLGFFAFTGFPTS************
Disordered Region (DISOPRED)
********SSSCNLIRSSGKQIPSHPKPFLGDGQRI*********************HRFSV************************************************FYVYLLTSTITAIAAIGSIFEYVNKNPVFGILNSDSIFYAPLLGFFAFTGFPTSRSIGPERCYS**
Disordered Region (DISEMBL)
************NLIRSSGKQIPSHPKPFLGDGQRILNQLVAKRNPSYHAFQNKKLPHRFSVFAV*********************************KGLTSQGSFEIPFYVYLLTSTITAIAAIGSIFEYVNKNPVFGILNSDSIFYAPLLGFFAFTGFPTSRSIGPERCYSFN
Disordered Region (DISPRO)
***ATILSSSSCNLIRSSGKQIPSHPKPFLGDGQRILNQLVAKRNPSYHA*Q****PHRFSVFAVTEGS************************************SFEIPFYVYLLTSTITAIAAIGSIFEYVNKNPVFGILNSDSIFYAPLLGFFAFTGFPTSRSIGPERCYSFN
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MMSATILSSSSCNLIRSSGKQIPSHPKPFLGDGQRILNQLVAKRNPSYHAFQNKKLPHRFSVFAVTEGSAKSSESEETIPSWAKPDSDEPPPWATDEGKGLTSQGSFEIPFYVYLLTSTITAIAAIGSIFEYVNKNPVFGILNSDSIFYAPLLGFFAFTGFPTSRSIGPERCYSFN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	176
225431386	190	PREDICTED: uncharacterized protein LOC10	0.931	0.863	0.660	7e-54
449473313	172	PREDICTED: uncharacterized protein LOC10	0.806	0.825	0.577	5e-43
255575261	176	conserved hypothetical protein [Ricinus	0.857	0.857	0.588	5e-40
224056729	181	predicted protein [Populus trichocarpa]	0.886	0.861	0.597	5e-37
116792022	187	unknown [Picea sitchensis]	0.596	0.561	0.703	3e-36
388496594	165	unknown [Lotus japonicus]	0.727	0.775	0.565	7e-34
351723271	177	uncharacterized protein LOC100499876 [Gl	0.738	0.734	0.627	8e-34
388510544	171	unknown [Lotus japonicus]	0.727	0.748	0.565	9e-34
351722993	182	uncharacterized protein LOC100306066 [Gl	0.846	0.818	0.549	6e-33
297816416	182	hypothetical protein ARALYDRAFT_906500 [	0.659	0.637	0.627	3e-32

>gi|225431386|ref|XP_002279284.1| PREDICTED: uncharacterized protein LOC100266100 [Vitis vinifera]

 Score =  214 bits (546), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 109/165 (66%), Positives = 126/165 (76%), Gaps = 1/165 (0%)

Query: 1   MMSATILSSSSCNLIRSSGKQIPSHPKPFLGDGQRILN-QLVAKRNPSYHAFQNKKLPHR 59
           M +A++L     NLI SS K+ P HPK F G G +IL+  +  KRN ++   Q   L H+
Sbjct: 1   MAAASLLCLCDTNLIHSSRKESPWHPKLFPGVGHKILDLSVTRKRNRTHPGRQKGNLSHK 60

Query: 60  FSVFAVTEGSAKSSESEETIPSWAKPDSDEPPPWATDEGKGLTSQGSFEIPFYVYLLTST 119
           FSV A TEGSAKS++SEETIPSWA+PDS EPPPWA DEG G  S+ SFEIPFYVYLLTS 
Sbjct: 61  FSVSATTEGSAKSNKSEETIPSWARPDSSEPPPWAQDEGMGNESEKSFEIPFYVYLLTSA 120

Query: 120 ITAIAAIGSIFEYVNKNPVFGILNSDSIFYAPLLGFFAFTGFPTS 164
           +TAIAAIGSIFEY NK PVFG+L+SDSIFYAPLLGFF FTG PTS
Sbjct: 121 VTAIAAIGSIFEYANKRPVFGVLSSDSIFYAPLLGFFVFTGIPTS 165

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449473313|ref|XP_004153846.1| PREDICTED: uncharacterized protein LOC101218426 [Cucumis sativus] gi|449490678|ref|XP_004158675.1| PREDICTED: uncharacterized protein LOC101229448 [Cucumis sativus]

 Score =  179 bits (453), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 97/168 (57%), Positives = 115/168 (68%), Gaps = 26/168 (15%)

Query: 2   MSATILS----SSSCNLIRSSGKQIP-SHPKPFLGDGQRILNQLVAKRNPSYHAFQNKKL 56
           MSAT+LS    S  CN  R   K++   H + F             +RN  Y        
Sbjct: 1   MSATLLSYCNPSLVCNYGRMDLKRMALGHLRSF------------GRRNNGYR------- 41

Query: 57  PHRFSVFAVTEGSAKSSESEETIPSWAKPDSDEPPPWATDEGKGLTSQGSFEIPFYVYLL 116
             + +VFAVTEGSAKSSESEETIPSWAK DS+EPPPWA +EGK + +Q  F++PFYVYLL
Sbjct: 42  --KLTVFAVTEGSAKSSESEETIPSWAKLDSEEPPPWAKEEGKEIGTQQGFQVPFYVYLL 99

Query: 117 TSTITAIAAIGSIFEYVNKNPVFGILNSDSIFYAPLLGFFAFTGFPTS 164
            S+ITAIAAIGS+FEYVN+ PVFGI+NSDSI YAPLLGFFA TG PT+
Sbjct: 100 ASSITAIAAIGSVFEYVNQKPVFGIINSDSILYAPLLGFFALTGIPTA 147

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575261|ref|XP_002528534.1| conserved hypothetical protein [Ricinus communis] gi|223532036|gb|EEF33846.1| conserved hypothetical protein [Ricinus communis]

 Score =  169 bits (427), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 96/163 (58%), Positives = 117/163 (71%), Gaps = 12/163 (7%)

Query: 2   MSATILSSSSCNLIRSSGKQIPSHPKPFLGDGQRILNQLVAKRNPSYHAFQNKKLPHRFS 61
           M+A ++   + N+I++S   +        G  +RILN+   K N S      +K   R +
Sbjct: 1   MAAALIIPCNSNIIQASYSTL-------FGVRRRILNKPTGKVNVS-----TRKFCKRLT 48

Query: 62  VFAVTEGSAKSSESEETIPSWAKPDSDEPPPWATDEGKGLTSQGSFEIPFYVYLLTSTIT 121
           VFA TEGSA SS+SEE IP+WAKPDSDEPPPWA DEG G +++ + EIPF+VYLL S IT
Sbjct: 49  VFAATEGSADSSKSEENIPTWAKPDSDEPPPWARDEGSGNSAEQTVEIPFFVYLLASAIT 108

Query: 122 AIAAIGSIFEYVNKNPVFGILNSDSIFYAPLLGFFAFTGFPTS 164
           AIAAIGS+FEY N+NPVFGIL SDSIFYAPLLGFFAFTG PTS
Sbjct: 109 AIAAIGSVFEYANQNPVFGILKSDSIFYAPLLGFFAFTGIPTS 151

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224056729|ref|XP_002298994.1| predicted protein [Populus trichocarpa] gi|118484433|gb|ABK94093.1| unknown [Populus trichocarpa] gi|222846252|gb|EEE83799.1| predicted protein [Populus trichocarpa]

 Score =  159 bits (401), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/164 (59%), Positives = 118/164 (71%), Gaps = 8/164 (4%)

Query: 1   MMSATILSSSSCNLIRSSGKQIPSHPKPFLGDGQRILNQLVAKRNPSYHAFQNKKLPHRF 60
           M +AT+L   + +LI        S  + F+ +     NQ   K   SY+A+Q +K   +F
Sbjct: 1   MAAATLLCWCNSDLIIHG-----SCSRLFVRNKVMDSNQSTVKSRGSYYAYQKQK---KF 52

Query: 61  SVFAVTEGSAKSSESEETIPSWAKPDSDEPPPWATDEGKGLTSQGSFEIPFYVYLLTSTI 120
            V A TEGSAKSS+SEETIPSWAKPDSDEPPPWA  EGK  +S+ +FE+PF+VYLL S I
Sbjct: 53  FVCAATEGSAKSSKSEETIPSWAKPDSDEPPPWAKGEGKENSSKQNFEVPFFVYLLASAI 112

Query: 121 TAIAAIGSIFEYVNKNPVFGILNSDSIFYAPLLGFFAFTGFPTS 164
           TAIAAIGSIFEYVN+ PVFG++N DSIFYAPLLGFFAFTG P S
Sbjct: 113 TAIAAIGSIFEYVNQRPVFGVVNPDSIFYAPLLGFFAFTGIPFS 156

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116792022|gb|ABK26201.1| unknown [Picea sitchensis]

 Score =  156 bits (395), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 76/108 (70%), Positives = 87/108 (80%), Gaps = 3/108 (2%)

Query: 60  FSVFAVTEGSAKSSESEETIPSWAKPDSDEPPPWATDEGKGLTS---QGSFEIPFYVYLL 116
             V A TEGSAKS  S+  IPSWAKPDSDE PPWA  EGKG T+   + +F+IPFYVYLL
Sbjct: 55  LHVVAATEGSAKSEPSDPKIPSWAKPDSDELPPWARKEGKGQTADPAEPTFQIPFYVYLL 114

Query: 117 TSTITAIAAIGSIFEYVNKNPVFGILNSDSIFYAPLLGFFAFTGFPTS 164
           +S I AIAA+GS+FEYVN+ PVFG+LNSDS+FYAPLLGFF FTG PTS
Sbjct: 115 SSAIIAIAAVGSVFEYVNQKPVFGLLNSDSVFYAPLLGFFTFTGIPTS 162

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388496594|gb|AFK36363.1| unknown [Lotus japonicus]

 Score =  148 bits (374), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 82/145 (56%), Positives = 97/145 (66%), Gaps = 17/145 (11%)

Query: 21  QIPSHPKPFLGDGQRILNQLVAKRNPSYHAFQNKKLPHRFSVFAVTEGSAKSSESEETIP 80
           Q  S P PFLG  Q   ++    R         KK P +  V AVT+      +S+E +P
Sbjct: 18  QHASLPTPFLGVPQ-CQSKFFGIR---------KKPPQKLVVVAVTK------DSDEKVP 61

Query: 81  SWAKPDSDEPPPWATDEGKGLTSQGS-FEIPFYVYLLTSTITAIAAIGSIFEYVNKNPVF 139
           SWAKPDSDEPPPWA DE    T+  S FE+PFYVYLL S ITAIAA+GSIFEYVN+ PVF
Sbjct: 62  SWAKPDSDEPPPWARDEANNKTASSSGFEVPFYVYLLASAITAIAAVGSIFEYVNQKPVF 121

Query: 140 GILNSDSIFYAPLLGFFAFTGFPTS 164
           G+L  DS+FYAP+LGFFAFTG P+S
Sbjct: 122 GLLPYDSVFYAPVLGFFAFTGIPSS 146

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723271|ref|NP_001237273.1| uncharacterized protein LOC100499876 [Glycine max] gi|255627331|gb|ACU14010.1| unknown [Glycine max]

 Score =  148 bits (374), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 91/145 (62%), Positives = 103/145 (71%), Gaps = 15/145 (10%)

Query: 21  QIPSHPKPFLGDGQRILNQLVAKRNPSYHAFQNKKLPHRFSVFAVTEGSAKSSESEETIP 80
           Q  SHP  FLG         V K N      + +K PHR  V AVT+GSA+SS+S+E IP
Sbjct: 22  QHVSHPTTFLG---------VPKNNQ-----RKRKTPHRLVVVAVTQGSAESSKSDEKIP 67

Query: 81  SWAKPDSDEPPPWATDEGKGLTSQGS-FEIPFYVYLLTSTITAIAAIGSIFEYVNKNPVF 139
           SWAKPDSDEPPPWA DE    +SQ   FEIPFY YL  S ITAIAAIGSIFEYVN+ PVF
Sbjct: 68  SWAKPDSDEPPPWARDEPNNNSSQQEGFEIPFYAYLFASAITAIAAIGSIFEYVNQKPVF 127

Query: 140 GILNSDSIFYAPLLGFFAFTGFPTS 164
           G+L+SDS+FYAPLLGFF FTG P+S
Sbjct: 128 GVLSSDSVFYAPLLGFFVFTGIPSS 152

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388510544|gb|AFK43338.1| unknown [Lotus japonicus]

 Score =  148 bits (373), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 82/145 (56%), Positives = 97/145 (66%), Gaps = 17/145 (11%)

Query: 21  QIPSHPKPFLGDGQRILNQLVAKRNPSYHAFQNKKLPHRFSVFAVTEGSAKSSESEETIP 80
           Q  S P PFLG  Q   ++    R         KK P +  V AVT+      +S+E +P
Sbjct: 18  QHASLPTPFLGVPQ-CQSKFFGIR---------KKPPQKLVVVAVTK------DSDEKVP 61

Query: 81  SWAKPDSDEPPPWATDEGKGLTSQGS-FEIPFYVYLLTSTITAIAAIGSIFEYVNKNPVF 139
           SWAKPDSDEPPPWA DE    T+  S FE+PFYVYLL S ITAIAA+GSIFEYVN+ PVF
Sbjct: 62  SWAKPDSDEPPPWARDEANNKTASSSGFEVPFYVYLLASAITAIAAVGSIFEYVNQKPVF 121

Query: 140 GILNSDSIFYAPLLGFFAFTGFPTS 164
           G+L  DS+FYAP+LGFFAFTG P+S
Sbjct: 122 GLLPYDSVFYAPVLGFFAFTGIPSS 146

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351722993|ref|NP_001237007.1| uncharacterized protein LOC100306066 [Glycine max] gi|255627429|gb|ACU14059.1| unknown [Glycine max]

 Score =  145 bits (366), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/171 (54%), Positives = 112/171 (65%), Gaps = 22/171 (12%)

Query: 2   MSATILSSSSCNLIRSSG---KQIPSHPKPFLGDGQRILNQLVAKRNPSYHAFQNKKLPH 58
           M+A+   SSS   +  +G    Q  SHP+ F G         V  +N      + +K PH
Sbjct: 1   MAASGGCSSSFLTLSCAGAAQNQHASHPRTFFG---------VPHKNQ-----RKRKTPH 46

Query: 59  RFSVFAVTEGSAKSSESEETIPSWAKPDSDEPPPWATDE-----GKGLTSQGSFEIPFYV 113
           R  V AVT+GSA+SS+S+E IPSWAKPDSDEPPPWA DE           +  FEIPFY 
Sbjct: 47  RLVVVAVTQGSAESSKSDEKIPSWAKPDSDEPPPWARDEPNNKNSNNSQQEEEFEIPFYA 106

Query: 114 YLLTSTITAIAAIGSIFEYVNKNPVFGILNSDSIFYAPLLGFFAFTGFPTS 164
           YLL S ITAIAAIGSIFEYVN+ PVFG+L+SDS+FYAPLLGFF FTG P+S
Sbjct: 107 YLLASAITAIAAIGSIFEYVNQRPVFGVLSSDSVFYAPLLGFFVFTGIPSS 157

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297816416|ref|XP_002876091.1| hypothetical protein ARALYDRAFT_906500 [Arabidopsis lyrata subsp. lyrata] gi|297321929|gb|EFH52350.1| hypothetical protein ARALYDRAFT_906500 [Arabidopsis lyrata subsp. lyrata]

 Score =  143 bits (360), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/129 (62%), Positives = 92/129 (71%), Gaps = 13/129 (10%)

Query: 46  PSYHAFQNKKLPH----------RFSVFAVTEGSAKSSESEETIPSWAKPDSDEPPPWAT 95
           P +H    ++  H          R  V A TEGS KS ESE   PSWA PDSDEPPPWA 
Sbjct: 32  PGHHPLAGRRKGHLLHYELTTVRRLVVTAATEGSRKSKESE---PSWANPDSDEPPPWAR 88

Query: 96  DEGKGLTSQGSFEIPFYVYLLTSTITAIAAIGSIFEYVNKNPVFGILNSDSIFYAPLLGF 155
           +EG+  TSQ SFE+PFYVYLL S ITAIAAIGS+FEY +KNPVFG+L+SDSIFY P+LGF
Sbjct: 89  NEGRSSTSQESFEVPFYVYLLASAITAIAAIGSVFEYSSKNPVFGVLDSDSIFYTPVLGF 148

Query: 156 FAFTGFPTS 164
           FA TG PTS
Sbjct: 149 FALTGIPTS 157

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	176
TAIR|locus:2081850	181	AT3G51510 "AT3G51510" [Arabido	0.687	0.668	0.580	5.8e-34

TAIR|locus:2081850 AT3G51510 "AT3G51510" [Arabidopsis thaliana (taxid:3702)]

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 72/124 (58%), Positives = 82/124 (66%)

Query:    41 VAKRNPSYHAFQNKKLPHRFSVFAVTEGSAKSSESEETIPSWAKPDSDEPPPWATDEGKG 100
             +A R   +     +    R  V A TEGS KS ESE   PSWA PDSDEPPPWA +EG+ 
Sbjct:    36 LAGRRKGHLLHYERSTVRRLVVTAATEGSKKSKESE---PSWANPDSDEPPPWARNEGRS 92

Query:   101 LTSQGSFEIPFYVYLLXXXXXXXXXXGSIFEYVNKNPVFGILNSDSIFYAPLLGFFAFTG 160
              TSQ SFE+PF+VYLL          GS+FEY +KNPVFGIL SDSIFY P+LGFFA TG
Sbjct:    93 STSQESFEVPFFVYLLASAITAIAAIGSVFEYTSKNPVFGILESDSIFYTPVLGFFALTG 152

Query:   161 FPTS 164
              PTS
Sbjct:   153 IPTS 156


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.136   0.419    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      176       153   0.00081  105 3  11 22  0.38    32
                                                     30  0.41    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  571 (61 KB)
  Total size of DFA:  141 KB (2087 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.69u 0.25s 14.94t   Elapsed:  00:00:01
  Total cpu time:  14.69u 0.25s 14.94t   Elapsed:  00:00:01
  Start:  Sat May 11 03:20:54 2013   End:  Sat May 11 03:20:55 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00008701001	SubName- Full=Chromosome chr4 scaffold_205, whole genome shotgun sequence; (190 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00034383001	SubName- Full=Putative uncharacterized protein (Chromosome chr9 scaffold_7, whole genome shotgu [...] (144 aa)				•					0.417
	GSVIVG00026253001	SubName- Full=Chromosome chr15 scaffold_37, whole genome shotgun sequence; (330 aa)				•					0.410

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00