Citrus Sinensis ID: 030719

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170--
Protein Sequence
MDALKLKGKKGNLIVKTWERCKSIGRSSKRSAPALRVKSKSWPRIDTRLEEEEEDEEEEKRSKKLKRRVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVLPCRVDVFYRVLLAVDDHDHDHNKEDNFIRRPGCGFGKGYRLLSPSPMIPINHF
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHccccccccHHHHccccccccccccHHHHHHHHHHHHHHHccccccccccEEEEEEccccEEEEEEccccccHHHHHHHHHHHHHccccccccEEEcccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHccHHHEEEEEEEEEEEEcccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccEEEEEEcccccEEEEEcHHcccHHHHHHHHHHHHHHccccccccEccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEHccc
Coil and Loop (DISEMBL)
mdalklkgkkgnlIVKTWERCKSIgrsskrsapalrvkskswpridtrleeeeeDEEEEKRSKKLKrrvapegcfsvyvgpqkqrfvikteyvnhpLFKLLLEEAeseygfqsegplvlpcrVDVFYRVLLAvddhdhdhnkednfirrpgcgfgkgyrllspspmipinhf
Flexible Loop (DISEMBL)
mdalklkgkkgnlivktwercksigrsskrsapalrvkskswpridtrleeeeedeeeekrskklkrrvapegcfsvyvgpqkqrfVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVLPCRVDVFYRVLLAVddhdhdhnkednfirrpgCGFGKgyrllspspmipinhf
Low Complexity Region (SEG)
MDALKLKGKKGNLIVKTWERCKSIGRSSKRSAPALRVKSKSWPRIDTRLeeeeedeeeeKRSKKLKRRVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVLPCRVDVFYRVLLAVddhdhdhNKEDNFIRRPGCGFGKGYRLLSPSPMIPINHF
Disordered region (IsUnstruct)
***********NLIVKTWERC**************************************************EGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVLPCRVDVFYRVLLAVDDHDHDHNKEDNFIRRPGCGFGKGYRLL***********
Disordered Region (DISOPRED)
*************IVKTW******************************************************GCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVLPCRVDVFYRVLL*******************G*********************
Disordered Region (DISEMBL)
MDALKLKGKKGNLIVKTWERCKSIG*************SKSWPRIDT********************RVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVLPCRVDVFYRVLLAVDDHDHDHNKEDNFIRRPGCGFGKGYRLLSPSPMIPINHF
Disordered Region (DISPRO)
*****LKGKKGNLIVKTWERCKSIG**************************EEE************RRVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVLPCRVDVFYRVLLAVDD*************RPGCGFGKGYRLLSPSPMIP*N*F
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDALKLKGKKGNLIVKTWERCKSIGRSSKRSAPALRVKSKSWPRIDTxxxxxxxxxxxxxxxxxxxxxVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVLPCRVDVFYRVLLAVDDHDHDHNKEDNFIRRPGCGFGKGYRLLSPSPMIPINHF
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	172	2.2.26 [Sep-21-2011]
P33082	82	Auxin-induced protein X15	no	no	0.377	0.792	0.424	2e-08
P32295	92	Indole-3-acetic acid-indu	N/A	no	0.395	0.739	0.430	2e-08
P33081	82	Auxin-induced protein 15A	no	no	0.372	0.780	0.461	4e-08
P33080	92	Auxin-induced protein X10	no	no	0.383	0.717	0.402	3e-07
P33083	90	Auxin-induced protein 6B	no	no	0.337	0.644	0.440	4e-07
P33079	93	Auxin-induced protein 10A	no	no	0.406	0.752	0.380	1e-06

>sp|P33082|AXX15_SOYBN Auxin-induced protein X15 OS=Glycine max PE=2 SV=1

 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)

Query: 70  APEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGF-QSEGPLVLPCRVDVFYR 128
           AP+G  +VYVG + +RFVI   Y+N P F+ LL +AE E+G+    G L +PC  +VF R
Sbjct: 17  APKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQR 76

Query: 129 VLLAVD 134
           +   ++
Sbjct: 77  ITCCLN 82

Glycine max (taxid: 3847)

>sp|P32295|ARG7_VIGRR Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 4/72 (5%)

Query: 59  EKRSKKLKRRVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGF-QSEGPL 117
           E  SK L    AP+G  +VYVG   +RFVI   ++N PLF+ LL +AE E+G+    G L
Sbjct: 17  EASSKVLD---APKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGL 73

Query: 118 VLPCRVDVFYRV 129
            +PC  D+F  +
Sbjct: 74  TIPCSEDLFQHI 85

Vigna radiata var. radiata (taxid: 3916)

>sp|P33081|AX15A_SOYBN Auxin-induced protein 15A OS=Glycine max PE=2 SV=1

 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 63  KKLKRRVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGF-QSEGPLVLPC 121
           K  K   AP+G  +VYVG + +RFVI   Y+N P F+ LL +AE E+G+    G L +PC
Sbjct: 10  KASKAADAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPC 69

Query: 122 RVDVF 126
             DVF
Sbjct: 70  SEDVF 74

Glycine max (taxid: 3847)

>sp|P33080|AX10A_SOYBN Auxin-induced protein X10A OS=Glycine max PE=2 SV=1

 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 70  APEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGF-QSEGPLVLPCRVDVFYR 128
            P+G   VYVG + +RF+I   Y+N P F+ LL +AE E+G+    G L +PC+ D F  
Sbjct: 25  VPKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLT 84

Query: 129 VLLAVDD 135
           V   ++D
Sbjct: 85  VTSHLND 91

Glycine max (taxid: 3847)

>sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max PE=2 SV=1

 Score = 54.3 bits (129), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 1/59 (1%)

Query: 72  EGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQS-EGPLVLPCRVDVFYRV 129
           +G  +VYVG + +RFVI   Y+N P F+ LL +AE E+G+    G L +PC  DVF  +
Sbjct: 27  KGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHI 85

Glycine max (taxid: 3847)

>sp|P33079|A10A5_SOYBN Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1

 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)

Query: 66  KRRVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGF-QSEGPLVLPCRVD 124
           KR   P+G  +VYVG + +RF I   Y+N P F+ LL +AE E+G+    G L +PC+ +
Sbjct: 22  KRVDVPKGYAAVYVGDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEE 81

Query: 125 VFYRVLLAVDD 135
            F  V   +++
Sbjct: 82  EFLNVTAHLNE 92

Glycine max (taxid: 3847)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	172
315937294	182	SAUR family protein [Jatropha curcas]	0.965	0.912	0.569	5e-50
224057798	160	SAUR family protein [Populus trichocarpa	0.883	0.95	0.637	3e-48
224072526	167	SAUR family protein [Populus trichocarpa	0.930	0.958	0.614	1e-47
255547624	174	hypothetical protein RCOM_1078910 [Ricin	0.953	0.942	0.582	2e-45
359473793	153	PREDICTED: uncharacterized protein LOC10	0.848	0.954	0.593	1e-41
356569123	172	PREDICTED: uncharacterized protein LOC10	0.843	0.843	0.548	3e-41
388521003	162	unknown [Medicago truncatula]	0.866	0.919	0.529	3e-38
388490924	171	unknown [Lotus japonicus]	0.808	0.812	0.526	5e-38
356524571	176	PREDICTED: uncharacterized protein LOC10	0.627	0.613	0.604	2e-33
225425188	154	PREDICTED: uncharacterized protein LOC10	0.872	0.974	0.494	1e-32

>gi|315937294|gb|ADU56197.1| SAUR family protein [Jatropha curcas]

 Score =  202 bits (513), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 103/181 (56%), Positives = 131/181 (72%), Gaps = 15/181 (8%)

Query: 1   MDALKLKGKKGNLIVKTWERCKSIGRSSKRSA---PALRVKSKSWPRIDTRLEEEEEDEE 57
           MD +K+K +KGNLI+KTWERCKS+GRSSK+++    +L  KSKSWPR+   + +E ++++
Sbjct: 1   MDVIKVKERKGNLIIKTWERCKSLGRSSKKTSRIVKSLTAKSKSWPRVPPLIHDEGQEDD 60

Query: 58  EEKRSKKL---KRRVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSE 114
           ++ ++KK    KR+V PEGCFSV VGPQKQRF IKTEY NHPLFK+LLEEAESEYG+  E
Sbjct: 61  QDNKNKKCSSRKRKVTPEGCFSVCVGPQKQRFFIKTEYANHPLFKILLEEAESEYGYNPE 120

Query: 115 GPLVLPCRVDVFYRVLLAVDDHDHDHNKEDNFIRRPGCGFGKG---YRLLSPSPMIPINH 171
           GPL LPC VD+F  VL A+ D++   N      R  GCGF K    YRLLSPS M+ I  
Sbjct: 121 GPLALPCNVDIFVEVLSAMADNEETTN------RIHGCGFSKNFNSYRLLSPSRMVAIIT 174

Query: 172 F 172
           F
Sbjct: 175 F 175

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224057798|ref|XP_002299329.1| SAUR family protein [Populus trichocarpa] gi|222846587|gb|EEE84134.1| SAUR family protein [Populus trichocarpa]

 Score =  196 bits (497), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/171 (63%), Positives = 125/171 (73%), Gaps = 19/171 (11%)

Query: 1   MDALKLKGK-KGNLIVKTWERCKSIGRSSKRSAPALRV---KSKSWPRIDTRLEEEEEDE 56
           MD  K KGK +GNLI+KTWERCKSIGR SKR++  +R    KSKS+P I   LE    D+
Sbjct: 1   MDMSKGKGKTEGNLIIKTWERCKSIGRGSKRTSRLVRSLTPKSKSYPHIKVSLE----DD 56

Query: 57  EEEKRSKKLKRRVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGP 116
            + K S++  RRVAPEGCFSVYVGPQKQRFVIKTEY NHPLFK+LLEEAESEYG+ SEGP
Sbjct: 57  HDRKHSRQ--RRVAPEGCFSVYVGPQKQRFVIKTEYANHPLFKMLLEEAESEYGYSSEGP 114

Query: 117 LVLPCRVDVFYRVLLAVDDHDHDHNKEDNFIRRPGCGFGK---GYRLLSPS 164
           L LPC VD+FYRVL+AV+    D N +D      GCGF K    Y LLSPS
Sbjct: 115 LTLPCNVDIFYRVLMAVE----DTNIDDKI--HLGCGFAKNYGSYHLLSPS 159

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224072526|ref|XP_002303770.1| SAUR family protein [Populus trichocarpa] gi|222841202|gb|EEE78749.1| SAUR family protein [Populus trichocarpa]

 Score =  194 bits (493), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/179 (61%), Positives = 126/179 (70%), Gaps = 19/179 (10%)

Query: 1   MDALKLKGK-KGNLIVKTWERCKSIGRSSKRSAP---ALRVKSKSWPRIDTRLEEEEEDE 56
           MD  K KGK KGNLI+KTWERC S GR SKR++    +L  KSKS P I   LE    D+
Sbjct: 1   MDVSKGKGKFKGNLIIKTWERCISFGRGSKRTSRLERSLTPKSKSCPHIKVSLE----DD 56

Query: 57  EEEKRSKKLKRRVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGP 116
            ++K S+K   RVAPEGCFSVYVGPQKQRFVIKTEY NHPLFK+LLEEAESEYG+  EGP
Sbjct: 57  HDQKHSRK--SRVAPEGCFSVYVGPQKQRFVIKTEYANHPLFKILLEEAESEYGYNPEGP 114

Query: 117 LVLPCRVDVFYRVLLAVDDHDHDHNKEDNFIRRPGCGFGKG---YRLLSPSPMIPINHF 172
           L LPC VD+FY+VL+A++D        DN I R GC F K    Y LLSPS MI +N F
Sbjct: 115 LTLPCNVDIFYKVLMAMED-----TGIDNKIHR-GCSFAKNYGSYHLLSPSRMIVLNQF 167

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547624|ref|XP_002514869.1| hypothetical protein RCOM_1078910 [Ricinus communis] gi|223545920|gb|EEF47423.1| hypothetical protein RCOM_1078910 [Ricinus communis]

 Score =  186 bits (473), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/182 (58%), Positives = 124/182 (68%), Gaps = 18/182 (9%)

Query: 1   MDALKLKGKKGNLIVKTWERCKSIGRSSKRSA---PALRVKSKSWPRIDTRLEEEEEDEE 57
           MD  + K KKGNLI+KTWERCKS+GR SKR++    +L  KSKS P +        +D++
Sbjct: 1   MDFTREKRKKGNLIIKTWERCKSLGRGSKRTSRLVGSLITKSKSLPHLHIH-PSIGDDDQ 59

Query: 58  EEKRSKKLKRRVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPL 117
               S   KRRVAPEGCFSVYVGP+KQRFVIKTEY NHPLFK+LLEEAESEYG+  EGPL
Sbjct: 60  RSSSSSSRKRRVAPEGCFSVYVGPEKQRFVIKTEYANHPLFKVLLEEAESEYGYNPEGPL 119

Query: 118 VLPCRVDVFYRVLLAVDDHD----HDHNKEDNFIRRPGCGFGKG---YRLLSPSPMIPIN 170
            LPC VD+F +VL+A+D  D    H H       RR GCGF K    YRLLSPS    +N
Sbjct: 120 ALPCNVDIFCKVLVAMDSSDDEAIHPH-------RRQGCGFSKNYGSYRLLSPSRTTALN 172

Query: 171 HF 172
           HF
Sbjct: 173 HF 174

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473793|ref|XP_003631359.1| PREDICTED: uncharacterized protein LOC100854260 [Vitis vinifera]

 Score =  174 bits (440), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/165 (59%), Positives = 112/165 (67%), Gaps = 19/165 (11%)

Query: 13  LIVKTWERCKSI--GRSSKRSAPALRVKSKSWPRIDTRLEEEEEDEEEEKRSKKLKRRVA 70
           LI KTW RCKS   GRSS+ + P    KSKSWPRI           E++KR KK   RVA
Sbjct: 3   LIKKTWNRCKSFSHGRSSE-NIPRAPKKSKSWPRITA--AAAAASLEDDKRVKK--GRVA 57

Query: 71  PEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVLPCRVDVFYRVL 130
           PEGCFSVYVGP+KQRFVIKTEY NHPLFK+LLEEAE EYG+ SEGPL LPC V++F++VL
Sbjct: 58  PEGCFSVYVGPEKQRFVIKTEYANHPLFKILLEEAELEYGYNSEGPLALPCNVEIFHKVL 117

Query: 131 LAVDDHDHDHNKEDNFIRRPGCGFGK---GYRLLSPSPMIPINHF 172
           L +D  D  H          GC F +    YRLLSPSPMI +NHF
Sbjct: 118 LEMDSSDKIHQ---------GCTFPRSHSSYRLLSPSPMIAMNHF 153

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356569123|ref|XP_003552755.1| PREDICTED: uncharacterized protein LOC100777217 [Glycine max]

 Score =  172 bits (437), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 91/166 (54%), Positives = 104/166 (62%), Gaps = 21/166 (12%)

Query: 13  LIVKTWERCKSIGRSSKRSAP------ALRVKSKSWPRIDTRLEEEEEDEEEEKRSKKLK 66
           LI KTWERCKSIGRS K ++          ++SKSWP           +  E K   K  
Sbjct: 22  LITKTWERCKSIGRSRKEASSNSLNTNTNTMRSKSWPN---------RNRAENKNKNKNS 72

Query: 67  RRVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVLPCRVDVF 126
             VAPEGCFSVYVGPQ QRFVIKTEY NHPLFK+LLEEAESEYG+ S+GPL LPC VDVF
Sbjct: 73  TIVAPEGCFSVYVGPQMQRFVIKTEYANHPLFKMLLEEAESEYGYNSQGPLALPCHVDVF 132

Query: 127 YRVLLAVDDHDHDHNKEDNFIRRPGCGFGKGYRLLSPSPMIPINHF 172
           Y+VL+ +D  D  H       R P       Y+LL  SPM+ INHF
Sbjct: 133 YKVLMEMDS-DETHGSCACVKRSPS-----AYQLLRTSPMLSINHF 172

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388521003|gb|AFK48563.1| unknown [Medicago truncatula]

 Score =  162 bits (411), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/185 (52%), Positives = 112/185 (60%), Gaps = 36/185 (19%)

Query: 1   MDALK-LKGKKGN----LIVKTWERCKSIG-----RSSKRSAPALRVKSKSWPRIDTRLE 50
           MD  K +K  KGN    LI KTWERCKSIG     +S   S      +SKSWP +     
Sbjct: 1   MDIGKNMKQGKGNKKIGLITKTWERCKSIGGGHKSKSYSSSVTPTTRRSKSWPGLP---- 56

Query: 51  EEEEDEEEEKRSKKLKRRVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYG 110
                  EE R KK    VAPEGCFSVYVGPQ QRFVIKTEY NHPLFK+LLEEAESEYG
Sbjct: 57  -----RGEENRRKK----VAPEGCFSVYVGPQMQRFVIKTEYANHPLFKMLLEEAESEYG 107

Query: 111 FQSEGPLVLPCRVDVFYRVLLAVDDHDHDHNKEDNFIRRPGCGFGK---GYRLLSPSPMI 167
           +  +GPL LPC VDVFY+VL+ +D+               GC FG+    Y LLSPS MI
Sbjct: 108 YSCQGPLALPCNVDVFYKVLMEMDNEAPLQ----------GCTFGRSRSSYHLLSPSRMI 157

Query: 168 PINHF 172
            +N+F
Sbjct: 158 VLNNF 162

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388490924|gb|AFK33528.1| unknown [Lotus japonicus]

 Score =  162 bits (410), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 89/169 (52%), Positives = 103/169 (60%), Gaps = 30/169 (17%)

Query: 9   KKGNLIVKTWERCKSIGRSSKRSAPALRVKSKSWPRIDTRLEEEEEDEEEEKRSKKLKRR 68
           KKG+LI KTWERCKSIGR +         +SKSWP                    K    
Sbjct: 26  KKGSLITKTWERCKSIGRGTTTRI----TRSKSWPS-----------------RGKSTTV 64

Query: 69  VAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVLPCRVDVFYR 128
           VAPEGCFSVYVG Q QRFVIKTEYVNHPLFK+LLEEAESEYG+ S+GP+VLPC VDVFY+
Sbjct: 65  VAPEGCFSVYVGQQMQRFVIKTEYVNHPLFKMLLEEAESEYGYSSQGPIVLPCNVDVFYK 124

Query: 129 VLLAVDDHDHDHNKEDNFIRRPGCGFGK-----GYRLLSPSPMIPINHF 172
           VL+ +D+     ++        GC F K      Y L SPS M+ INH 
Sbjct: 125 VLMEMDEETSTPDQPQPH----GCAFVKQRSRSSYHLPSPSRMLAINHL 169

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524571|ref|XP_003530902.1| PREDICTED: uncharacterized protein LOC100799988 [Glycine max]

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/124 (60%), Positives = 85/124 (68%), Gaps = 16/124 (12%)

Query: 13  LIVKTWERCKSIGRSSK-----RSAPALRVKSKSWPRIDTRLEEEEEDEEEEKRSKKLKR 67
           LI KTWERCKSIGR  K      +     ++SKSWPR D            E ++K    
Sbjct: 21  LITKTWERCKSIGRGRKVTSSSTNTNTNTMRSKSWPRRD-----------RENKNKNSTT 69

Query: 68  RVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVLPCRVDVFY 127
            VAPEGCFSVYVGPQ QRFVIKTEY +HPLFK+LLEEAESEYG+ S+GPL LPC VDVFY
Sbjct: 70  IVAPEGCFSVYVGPQMQRFVIKTEYASHPLFKMLLEEAESEYGYNSQGPLALPCHVDVFY 129

Query: 128 RVLL 131
            VL+
Sbjct: 130 MVLM 133

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225425188|ref|XP_002264638.1| PREDICTED: uncharacterized protein LOC100245472 [Vitis vinifera] gi|296088711|emb|CBI38161.3| unnamed protein product [Vitis vinifera]

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/176 (49%), Positives = 103/176 (58%), Gaps = 26/176 (14%)

Query: 1   MDALKLKGKKGNLIVKTWERCKSIGRSSKRS-APALRVKSKSWPRIDTRLEEEEEDEEEE 59
           MD  K + KKG L+ KTWE+ KS G     S      +KSKS P     LE  +      
Sbjct: 1   MDETKSRQKKG-LMKKTWEQFKSFGHGRILSRTHHSSMKSKSRPGHTASLEGVK------ 53

Query: 60  KRSKKLKRRVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVL 119
                 K RVAPEGCFSVYVG  KQRFV+KTEY NHPLF+ LLEEAE EYG+ + GPLVL
Sbjct: 54  ------KGRVAPEGCFSVYVGHGKQRFVVKTEYANHPLFRALLEEAELEYGYNNGGPLVL 107

Query: 120 PCRVDVFYRVLLAVDDHDHDHNKEDNFIRRPGCGFGK---GYRLLSPSPMIPINHF 172
           PC+V++F +VLL +D  D  H          GC F +    YRLL PS MI +NH 
Sbjct: 108 PCKVEIFLKVLLEMDSSDEVHQ---------GCSFARSPSSYRLLGPSRMITMNHL 154

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	172
TAIR|locus:2163310	183	AT5G50760 "AT5G50760" [Arabido	0.790	0.743	0.413	2.9e-23
TAIR|locus:2079552	136	AT3G61900 "AT3G61900" [Arabido	0.563	0.713	0.386	8.8e-15
TAIR|locus:2180464	190	AT5G20810 "AT5G20810" [Arabido	0.465	0.421	0.425	1.8e-14
TAIR|locus:2084851	160	AT3G43120 [Arabidopsis thalian	0.366	0.393	0.492	7.9e-14
TAIR|locus:2062759	121	AT2G46690 "AT2G46690" [Arabido	0.529	0.752	0.372	2.7e-13
TAIR|locus:2011801	110	AT1G56150 "AT1G56150" [Arabido	0.406	0.636	0.464	5.6e-13
TAIR|locus:2087700	132	AT3G12830 "AT3G12830" [Arabido	0.406	0.530	0.464	2.4e-12
TAIR|locus:2005694	154	AT1G75590 "AT1G75590" [Arabido	0.325	0.363	0.5	6.4e-12
TAIR|locus:2061037	178	AT2G24400 "AT2G24400" [Arabido	0.348	0.337	0.5	1.3e-11
TAIR|locus:2139569	150	AT4G34750 [Arabidopsis thalian	0.366	0.42	0.428	1.7e-11

TAIR|locus:2163310 AT5G50760 "AT5G50760" [Arabidopsis thaliana (taxid:3702)]

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 62/150 (41%), Positives = 86/150 (57%)

Query:    12 NLIVKTWERCKSIGRSSKRSAPALRVKSKSWPRIDTRLXXXXXXXXXXKRSKKLKRRVAP 71
             N I+KTW + KS G +S  + P+   KSKS      RL            SK   ++ +P
Sbjct:     3 NPILKTWRKVKSFGHTSSSTTPSF-TKSKSCHG-SFRLEDAKS-----NESKGKPKKESP 55

Query:    72 E-GCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVLPCRVDVFYRVL 130
               G F+VYVGP KQR V+KT+ +NHPLFK LLE+AE+EYG++ +GP+VLPC VD F++ L
Sbjct:    56 SHGFFTVYVGPTKQRIVVKTKLLNHPLFKNLLEDAETEYGYRRDGPIVLPCEVDFFFKAL 115

Query:   131 LAVXXXXXXXNKEDN------FIRRPGCGF 154
               +       + +D+      F   P CGF
Sbjct:   116 ADMKSNPGHHDHDDDYDDDDGFTNSPICGF 145

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2079552 AT3G61900 "AT3G61900" [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
 Identities = 39/101 (38%), Positives = 58/101 (57%)

Query:    60 KRSKKLKRRVAPEGCFSVYVGP---QKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGP 116
             K + K   +  P+GC ++ VG    +KQRFV+   Y NHPLF  LL EAE EYGF+ +G 
Sbjct:    20 KSNSKHGIKDVPKGCLAIKVGSKEEEKQRFVVPVFYFNHPLFMQLLREAEEEYGFEQKGT 79

Query:   117 LVLPCRVDVFYRVLLAVXXXXXXXNKEDNFIRRPGCGFGKG 157
             + +PC V+VF R +  +       + +D+  ++ GCG   G
Sbjct:    80 ITIPCHVEVF-RYVQDMINRERSLDDDDDASKQTGCGAKHG 119

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2180464 AT5G20810 "AT5G20810" [Arabidopsis thaliana (taxid:3702)]

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 34/80 (42%), Positives = 51/80 (63%)

Query:    71 PEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVLPCRVDVFYRVL 130
             P+G  +VYVGP+ +RF+I T Y++H LFK+LLE+AE E+GF   G L +PC V+ F  +L
Sbjct:    80 PKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQSGALTIPCEVETFKYLL 139

Query:   131 LAVXXXXXXXNKEDNFIRRP 150
               +       + +DN  + P
Sbjct:   140 KCMENNLKDLHPDDNSGKPP 159

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

GO:0005777 "peroxisome" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2084851 AT3G43120 [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 31/63 (49%), Positives = 45/63 (71%)

Query:    71 PEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVLPCRVDVFYRVL 130
             P+G  +VYVGP+ +RF+I T +++H LFK+LLE+AE EYGF   G L +PC V+ F  +L
Sbjct:    80 PKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSGALTIPCEVETFKYLL 139

Query:   131 LAV 133
               +
Sbjct:   140 KCI 142

GO:0005634 "nucleus" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

GO:0005516 "calmodulin binding" evidence=TAS;IPI

TAIR|locus:2062759 AT2G46690 "AT2G46690" [Arabidopsis thaliana (taxid:3702)]

 Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
 Identities = 35/94 (37%), Positives = 52/94 (55%)

Query:    61 RSKKLKRRVAPEGCFSVYVGPQ---KQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPL 117
             R + +K +  P+GC ++ VG Q   +QRF++   Y NHPLF  LL+EAE EYGF  +G +
Sbjct:    15 RKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTI 74

Query:   118 VLPCRVDVFYRVLLAVXXXXXXXNKEDNFIRRPG 151
              +PC V+ F  V   +       N  ++  R  G
Sbjct:    75 TIPCHVEEFRYVQALIDGERSVYNGNNHHHRHGG 108

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0009733 "response to auxin stimulus" evidence=ISS

GO:0006816 "calcium ion transport" evidence=RCA

TAIR|locus:2011801 AT1G56150 "AT1G56150" [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 33/71 (46%), Positives = 48/71 (67%)

Query:    61 RSKKLKRRV-APEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVL 119
             R+KK K +   PEG   VYVG + +RFV+  E +NHP+F  LL+++  EYG++ +G L +
Sbjct:    28 RTKKEKHKSWVPEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRI 87

Query:   120 PCRVDVFYRVL 130
             PC V VF R+L
Sbjct:    88 PCHVLVFERIL 98

GO:0003674 "molecular_function" evidence=ND

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2087700 AT3G12830 "AT3G12830" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 33/71 (46%), Positives = 46/71 (64%)

Query:    60 KRSKKLKRRVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVL 119
             +RSKK    V PEG   VYVG + +RFV+  E +NHP+F  LL  +  EYG++ +G L +
Sbjct:    41 RRSKKQTSSV-PEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQI 99

Query:   120 PCRVDVFYRVL 130
             PC V VF R++
Sbjct:   100 PCHVLVFERIM 110

GO:0003674 "molecular_function" evidence=ND

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2005694 AT1G75590 "AT1G75590" [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 28/56 (50%), Positives = 40/56 (71%)

Query:    71 PEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVLPCRVDVF 126
             P G  +VYVG   +RFV++  Y+NHP+ + LL +AE E+GF ++GPLV+PC   VF
Sbjct:    43 PSGHVAVYVGSSCRRFVVRATYLNHPVLRNLLVQAEEEFGFVNQGPLVIPCEESVF 98

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2061037 AT2G24400 "AT2G24400" [Arabidopsis thaliana (taxid:3702)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 30/60 (50%), Positives = 41/60 (68%)

Query:    71 PEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVLPCRVDVFYRVL 130
             P+G  +V VG +K+R+ I TEY++H  F +LL EAE E+GFQ  G L +PC V VF  +L
Sbjct:    65 PKGYLAVSVGLEKKRYTIPTEYLSHQAFYVLLREAEEEFGFQQAGVLRIPCEVSVFESIL 124

GO:0005575 "cellular_component" evidence=ND

GO:0009733 "response to auxin stimulus" evidence=ISS

GO:0005516 "calmodulin binding" evidence=ISS

TAIR|locus:2139569 AT4G34750 [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 27/63 (42%), Positives = 43/63 (68%)

Query:    71 PEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVLPCRVDVFYRVL 130
             P G  +V VG  ++R+V++ +++NHP+F+ LL EAE EYGF + GPL +PC   +F  ++
Sbjct:    38 PPGHVAVSVGENRRRYVVRAKHLNHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDII 97

Query:   131 LAV 133
               V
Sbjct:    98 AIV 100

GO:0005634 "nucleus" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

GO:0005516 "calmodulin binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: SAUR2 SAUR family protein (160 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	172
pfam02519	99	pfam02519, Auxin_inducible, Auxin responsive prote	1e-28
PLN03090	104	PLN03090, PLN03090, auxin-responsive family protei	5e-12
PLN03219	108	PLN03219, PLN03219, uncharacterized protein; Provi	1e-11
PLN03220	105	PLN03220, PLN03220, uncharacterized protein; Provi	7e-11

>gnl|CDD|217082 pfam02519, Auxin_inducible, Auxin responsive protein

 Score =  101 bits (254), Expect = 1e-28
 Identities = 33/70 (47%), Positives = 45/70 (64%)

Query: 61  RSKKLKRRVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVLP 120
            S K      P+G F+VYVG + +RFV+   Y+NHPLF+ LL+ AE E+GF  +G L +P
Sbjct: 26  SSSKSSSADVPKGHFAVYVGEETRRFVVPISYLNHPLFQELLDRAEEEFGFDQDGGLTIP 85

Query: 121 CRVDVFYRVL 130
           C V VF  +L
Sbjct: 86  CDVVVFEHLL 95

This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role. Length = 99

>gnl|CDD|178639 PLN03090, PLN03090, auxin-responsive family protein; Provisional

 Score = 59.0 bits (143), Expect = 5e-12
 Identities = 24/62 (38%), Positives = 40/62 (64%), Gaps = 1/62 (1%)

Query: 71  PEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVLPCRVDVFYRVL 130
           P+G F VYVG  + R+++   ++ HP F+ LL++AE E+GF  +  L +PC  +V +R L
Sbjct: 41  PKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQQAEEEFGFDHDMGLTIPCE-EVVFRSL 99

Query: 131 LA 132
            +
Sbjct: 100 TS 101

Length = 104

>gnl|CDD|178758 PLN03219, PLN03219, uncharacterized protein; Provisional

 Score = 58.2 bits (140), Expect = 1e-11
 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 3/61 (4%)

Query: 69  VAPEGCFSVYVGPQ--KQRFVIKTEYVNHPLFKLLLEEAESEYGF-QSEGPLVLPCRVDV 125
           + P+G  +VYVG Q  K+RFV+   Y+NHPLF+  L  AE E GF  S G L +PCR + 
Sbjct: 38  LVPKGHVAVYVGEQMEKKRFVVPISYLNHPLFREFLNRAEEECGFHHSMGGLTIPCREES 97

Query: 126 F 126
           F
Sbjct: 98  F 98

Length = 108

>gnl|CDD|178759 PLN03220, PLN03220, uncharacterized protein; Provisional

 Score = 55.9 bits (134), Expect = 7e-11
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 5/61 (8%)

Query: 71  PEGCFSVYVGPQ----KQRFVIKTEYVNHPLFKLLLEEAESEYGFQSE-GPLVLPCRVDV 125
           P+G  +VYVG Q    K+RFV+   ++NHP FK  L  AE E+GF    G L +PCR +V
Sbjct: 36  PKGHVAVYVGEQIEMEKKRFVVPISFLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEV 95

Query: 126 F 126
           F
Sbjct: 96  F 96

Length = 105

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	172
PF02519	100	Auxin_inducible: Auxin responsive protein; InterPr	100.0
PLN03090	104	auxin-responsive family protein; Provisional	100.0
PLN03220	105	uncharacterized protein; Provisional	99.97
PLN03219	108	uncharacterized protein; Provisional	99.97
PF02214	94	BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassi	87.87
PRK02899	197	adaptor protein; Provisional	83.97

>PF02519 Auxin_inducible: Auxin responsive protein; InterPro: IPR003676 This family consists of the protein products of a gene cluster that encodes a group of auxin-regulated RNAs (small auxin up RNAs, SAURs) []

Probab=100.00  E-value=9e-35  Score=218.58  Aligned_cols=67  Identities=48%  Similarity=1.001  Sum_probs=65.2

Q ss_pred             CCCCCceEEEEeCCCCeeEEEEecccCcHHHHHHHHHHHhhcCcCCCCCeEecCcHHHHHHHHHHHh
Q 030719           68 RVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVLPCRVDVFYRVLLAVD  134 (172)
Q Consensus        68 ~~~pkG~~~VYVG~e~~RfvVp~~yL~hp~F~eLL~~aeeEfG~~~~G~L~iPCd~~~Fe~vl~~l~  134 (172)
                      ..+|+|||+||||++++||+||++|||||+|++||++|||||||+++|+|+||||+++|+++||+|+
T Consensus        34 ~~vp~G~~~VyVG~~~~Rfvvp~~~L~hp~f~~LL~~aeeEfG~~~~G~l~iPC~~~~Fe~~l~~le  100 (100)
T PF02519_consen   34 SDVPKGHFAVYVGEERRRFVVPVSYLNHPLFQELLEQAEEEFGFDQDGPLTIPCDVVLFEHLLWLLE  100 (100)
T ss_pred             CCCCCCeEEEEeCccceEEEechHHcCchhHHHHHHHHhhhcCcCCCCcEEeeCCHHHHHHHHHHhC
Confidence            6789999999999999999999999999999999999999999999999999999999999999985

Proteins from this ARG7 auxin responsive genes family have no identified functional role [].

>PLN03090 auxin-responsive family protein; Provisional

Probab=100.00  E-value=1.1e-33  Score=214.62  Aligned_cols=68  Identities=34%  Similarity=0.717  Sum_probs=65.5

Q ss_pred             cCCCCCCceEEEEeCCCCeeEEEEecccCcHHHHHHHHHHHhhcCcCCCCCeEecCcHHHHHHHHHHH
Q 030719           66 KRRVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEGPLVLPCRVDVFYRVLLAV  133 (172)
Q Consensus        66 ~~~~~pkG~~~VYVG~e~~RfvVp~~yL~hp~F~eLL~~aeeEfG~~~~G~L~iPCd~~~Fe~vl~~l  133 (172)
                      .+.++|+||||||||++++||+||++||+||+|++||++|||||||+++|+|+||||+++|++++|+|
T Consensus        36 ~~~~vpkG~~aVyVG~~~~RfvVp~~~L~hP~F~~LL~~aeeEfGf~~~G~L~IPC~~~~Fe~ll~~i  103 (104)
T PLN03090         36 LPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQQAEEEFGFDHDMGLTIPCEEVVFRSLTSMI  103 (104)
T ss_pred             CCCCCCCCcEEEEECCCCEEEEEEHHHcCCHHHHHHHHHHHHHhCCCCCCcEEEeCCHHHHHHHHHHh
Confidence            34679999999999999999999999999999999999999999999999999999999999999998

>PLN03220 uncharacterized protein; Provisional

Probab=99.97  E-value=1.6e-31  Score=202.94  Aligned_cols=66  Identities=42%  Similarity=0.860  Sum_probs=61.7

Q ss_pred             cCCCCCCceEEEEeCC----CCeeEEEEecccCcHHHHHHHHHHHhhcCcCC-CCCeEecCcHHHHHHHHH
Q 030719           66 KRRVAPEGCFSVYVGP----QKQRFVIKTEYVNHPLFKLLLEEAESEYGFQS-EGPLVLPCRVDVFYRVLL  131 (172)
Q Consensus        66 ~~~~~pkG~~~VYVG~----e~~RfvVp~~yL~hp~F~eLL~~aeeEfG~~~-~G~L~iPCd~~~Fe~vl~  131 (172)
                      .+.+||+||||||||+    |++||+||++|||||+|++||++|||||||++ +|+|+|||+++.|++++.
T Consensus        31 ~~~~VPkGh~aVyVGe~~~~e~kRFVVPv~yL~hP~F~~LL~~AeEEfGf~~~~G~L~IPCd~~~F~~ll~  101 (105)
T PLN03220         31 SSDHVPKGHVAVYVGEQIEMEKKRFVVPISFLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIA  101 (105)
T ss_pred             ccCCCCCCeEEEEECCCCCccceEEEEEHHHcCChHHHHHHHHHHHHhCCCCCCCCEEeeCCHHHHHHHHH
Confidence            4467999999999997    47999999999999999999999999999997 699999999999999985

>PLN03219 uncharacterized protein; Provisional

Probab=99.97  E-value=7.7e-31  Score=200.01  Aligned_cols=68  Identities=41%  Similarity=0.851  Sum_probs=63.3

Q ss_pred             ccCCCCCCceEEEEeCC--CCeeEEEEecccCcHHHHHHHHHHHhhcCcCC-CCCeEecCcHHHHHHHHHH
Q 030719           65 LKRRVAPEGCFSVYVGP--QKQRFVIKTEYVNHPLFKLLLEEAESEYGFQS-EGPLVLPCRVDVFYRVLLA  132 (172)
Q Consensus        65 ~~~~~~pkG~~~VYVG~--e~~RfvVp~~yL~hp~F~eLL~~aeeEfG~~~-~G~L~iPCd~~~Fe~vl~~  132 (172)
                      ..+..+|+|||+||||+  |++||+||++|||||+|++||++|||||||++ +|+|+|||+++.|+++|..
T Consensus        34 ~~~~~vpkGh~aVYVG~~~E~kRFvVPi~yL~hP~F~~LL~~AeEEfGf~~~~G~L~IPCd~~~F~~ll~~  104 (108)
T PLN03219         34 TTSGLVPKGHVAVYVGEQMEKKRFVVPISYLNHPLFREFLNRAEEECGFHHSMGGLTIPCREESFLHLITS  104 (108)
T ss_pred             CCCCCCCCCeEEEEECCCCCceEEEEEHHHcCChHHHHHHHHHHHHhCCCCCCCCEEEeCCHHHHHHHHHh
Confidence            35678999999999997  58999999999999999999999999999996 6999999999999999864

>PF02214 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassium channels are the most diverse group of the ion channel family [, ]

Probab=87.87  E-value=0.53  Score=33.52  Aligned_cols=58  Identities=16%  Similarity=0.174  Sum_probs=44.4

Q ss_pred             EEeCCCCeeEEEEecccC-c--HHHHHHHHHHHhhcCcCCCCCeEecCcHHHHHHHHHHHhcC
Q 030719           77 VYVGPQKQRFVIKTEYVN-H--PLFKLLLEEAESEYGFQSEGPLVLPCRVDVFYRVLLAVDDH  136 (172)
Q Consensus        77 VYVG~e~~RfvVp~~yL~-h--p~F~eLL~~aeeEfG~~~~G~L~iPCd~~~Fe~vl~~l~~~  136 (172)
                      +=||  +++|.++.+-|. +  ..|..|+........-+.+|.+-|-++...|++||.-++.+
T Consensus         3 lNVG--G~~f~~~~~tL~~~~~s~l~~~~~~~~~~~~~~~~~~~fiDRdp~~F~~IL~ylr~~   63 (94)
T PF02214_consen    3 LNVG--GTIFETSRSTLTRYPDSLLARLFSGERSDDYDDDDGEYFIDRDPELFEYILNYLRTG   63 (94)
T ss_dssp             EEET--TEEEEEEHHHHHTSTTSTTTSHHHTGHGGGEETTTTEEEESS-HHHHHHHHHHHHHT
T ss_pred             EEEC--CEEEEEcHHHHhhCCCChhhhHHhhccccccCCccceEEeccChhhhhHHHHHHhhc
Confidence            4476  699999998877 4  47888887653222334679999999999999999999995

They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis []. All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. The Kv family can be divided into several subfamilies on the basis of sequence similarity and function. Four of these subfamilies, Kv1 (Shaker), Kv2 (Shab), Kv3 (Shaw) and Kv4 (Shal), consist of pore-forming alpha subunits that associate with different types of beta subunit. Each alpha subunit comprises six hydrophobic TM domains with a P-domain between the fifth and sixth, which partially resides in the membrane. The fourth TM domain has positively charged residues at every third residue and acts as a voltage sensor, which triggers the conformational change that opens the channel pore in response to a displacement in membrane potential []. More recently, 4 new electrically-silent alpha subunits have been cloned: Kv5 (KCNF), Kv6 (KCNG), Kv8 and Kv9 (KCNS). These subunits do not themselves possess any functional activity, but appear to form heteromeric channels with Kv2 subunits, and thus modulate Shab channel activity []. When highly expressed, they inhibit channel activity, but at lower levels show more specific modulatory actions. The N-terminal, cytoplasmic tetramerization domain (T1) of voltage-gated potassium channels encodes molecular determinants for subfamily-specific assembly of alpha-subunits into functional tetrameric channels []. This domain is found in a subset of a larger group of proteins that contain the BTB/POZ domain.; GO: 0005249 voltage-gated potassium channel activity, 0006813 potassium ion transport, 0008076 voltage-gated potassium channel complex, 0016020 membrane; PDB: 1NN7_A 3KVT_A 1EXB_E 1QDV_A 1DSX_E 1QDW_F 3LUT_B 3LNM_B 2A79_B 3DRY_C ....

>PRK02899 adaptor protein; Provisional

Probab=83.97  E-value=0.95  Score=37.76  Aligned_cols=25  Identities=40%  Similarity=0.951  Sum_probs=22.1

Q ss_pred             cHHHHHHHHHHHhhcCcCCCCCeEe
Q 030719           95 HPLFKLLLEEAESEYGFQSEGPLVL  119 (172)
Q Consensus        95 hp~F~eLL~~aeeEfG~~~~G~L~i  119 (172)
                      +-+|.++|++|..|+||..+|||+|
T Consensus        38 e~lF~~mm~Ea~~e~~F~~~~pl~~   62 (197)
T PRK02899         38 HQLFRDMMQEANKELGFEADGPIAV   62 (197)
T ss_pred             HHHHHHHHHHhhhccCcccCCeEEE
Confidence            4578888999999999999999976

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00