Citrus Sinensis ID: 030796

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-
Protein Sequence
MTYYEDDEVVPELTLRIDIDENNNNNKGDYLKLREYEEGEPGSPRRWSCGKVWYWVKLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVFASVALFPTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQVCIIAKIDL
Secondary Structure (PSIPRED)
ccEEccccccccccEEEEEccccccccccEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccccccccEEEEEEEEcccccccccEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHEEEEHHHHHHcHHEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEEEcc
Coil and Loop (DISEMBL)
mtyyeddevvpeltlrididennnnnkgdylklreyeegepgsprrwscgkvWYWVKLAFFLTSVGLLAAVFIKWvgpffmdkevipiinwetttfstPVLAVLVFASValfptlllpsspsmwvagmtFGYGFGFLLIMSAVAVGIslpyfigshflHRIQVCIIAKIDL
Flexible Loop (DISEMBL)
mtyyeddevvpeltlrididennnnnkgdylklreyeegepgsprrwsCGKVWYWVKLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVFASVALFPTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQVCIIAKIDL
Low Complexity Region (SEG)
MTYYEDDEVVPELTLRIDIDENNNNNKGDYLKLREYEEGEPGSPRRWSCGKVWYWVKLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPvlavlvfasvalfptlllpsspsMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQVCIIAKIDL
Disordered region (IsUnstruct)
*********************************************RWSCGKVWYWVKLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVFASVALFPTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQVCIIAKI**
Disordered Region (DISOPRED)
*TYYE**EVVPE***************************************VWYWVKLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVFASVALFPTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQVCIIAKID*
Disordered Region (DISEMBL)
********VVPELTLRIDIDENNNNNKGDYLKLREY*********RWSCGKVWYWVKLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVFASVALFPTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQVCIIAKIDL
Disordered Region (DISPRO)
******DEVVPELTLRIDIDENNNNNKGDYLKLREYEEGEPGSPRRWSCGKVWYWVKLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVFASVALFPTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQVCIIAKIDL
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTYYEDDEVVPELTLRIDIDENNNNNKGDYLKLREYEEGEPGSPRRWSCGKVWYWVKLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVFASVALFPTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQVCIIAKIDL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	171
224071615	299	predicted protein [Populus trichocarpa]	0.923	0.528	0.635	2e-53
255537153	306	conserved hypothetical protein [Ricinus	0.894	0.5	0.652	4e-52
359474282	293	PREDICTED: TVP38/TMEM64 family membrane	0.853	0.498	0.638	2e-50
356565329	302	PREDICTED: uncharacterized protein LOC10	0.923	0.523	0.603	3e-48
224058645	297	predicted protein [Populus trichocarpa]	0.941	0.542	0.666	6e-48
356513717	302	PREDICTED: TVP38/TMEM64 family membrane	0.912	0.516	0.590	9e-48
8778630	371	F5O11.19 [Arabidopsis thaliana]	0.947	0.436	0.563	6e-45
15221330	303	SNARE associated Golgi protein family [A	0.923	0.521	0.558	7e-44
357476997	313	TVP38/TMEM64 family membrane protein slr	0.877	0.479	0.554	5e-43
356497185	294	PREDICTED: TVP38/TMEM64 family membrane	0.941	0.547	0.549	3e-42

>gi|224071615|ref|XP_002303542.1| predicted protein [Populus trichocarpa] gi|222840974|gb|EEE78521.1| predicted protein [Populus trichocarpa]

 Score =  213 bits (543), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 110/173 (63%), Positives = 132/173 (76%), Gaps = 15/173 (8%)

Query: 1   MTYYEDDEVVPELTLRIDID--ENNNNNKGDYLKLREYEEGEPGSPRRWS-CG------- 50
           MT+YEDD VVPEL + ++ D  +  +N++GDY+ LR+    E G+  R + CG       
Sbjct: 1   MTFYEDDSVVPELIMSMEGDKIDGGDNSEGDYVNLRD----ENGAGERCNLCGFYWGFGW 56

Query: 51  -KVWYWVKLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVFASV 109
              WYWVKLA   T +GLLAA  + WVGPF MDKE+IPI+NWET TFSTPVLA+L+FASV
Sbjct: 57  SVFWYWVKLALLFTFIGLLAAACVMWVGPFLMDKEIIPIMNWETRTFSTPVLAILLFASV 116

Query: 110 ALFPTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQ 162
           ALFPTLLLPSSPSMWVAGMTFGYG GFLLI++A AVG+SLPY IGS FLH+IQ
Sbjct: 117 ALFPTLLLPSSPSMWVAGMTFGYGIGFLLIITAAAVGVSLPYLIGSLFLHKIQ 169

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255537153|ref|XP_002509643.1| conserved hypothetical protein [Ricinus communis] gi|223549542|gb|EEF51030.1| conserved hypothetical protein [Ricinus communis]

 Score =  209 bits (531), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 107/164 (65%), Positives = 125/164 (76%), Gaps = 11/164 (6%)

Query: 10  VPELTLRIDIDENNNNN-KGDYLKLREYE----------EGEPGSPRRWSCGKVWYWVKL 58
           VP L    +   ++ +N KGDY+KL + E          EG      +W    VWYW KL
Sbjct: 13  VPHLRTTTETGNHDEDNIKGDYVKLGDCEVEEERLVGVIEGSSFCLWKWRGSVVWYWFKL 72

Query: 59  AFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVFASVALFPTLLLP 118
           A   T +GLLAAVF+KWVGPFFMDKE+IPIINWETTTFSTPVLA+LVFASVALFP++LLP
Sbjct: 73  ALLFTCLGLLAAVFLKWVGPFFMDKELIPIINWETTTFSTPVLAILVFASVALFPSILLP 132

Query: 119 SSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQ 162
           S+PSMWVAG+TFGYGFGFLLI+SA AVG+SLPYFIGS FLH+IQ
Sbjct: 133 STPSMWVAGLTFGYGFGFLLIISASAVGVSLPYFIGSLFLHKIQ 176

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359474282|ref|XP_002274997.2| PREDICTED: TVP38/TMEM64 family membrane protein slr0305 [Vitis vinifera] gi|297742653|emb|CBI34802.3| unnamed protein product [Vitis vinifera]

 Score =  203 bits (516), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 106/166 (63%), Positives = 127/166 (76%), Gaps = 20/166 (12%)

Query: 5   EDDEVVPELTLRIDIDENNNNNKGDYLKLRE----YEEG----EPGSPRRWSCGKVWYWV 56
           +D  VVPELTLR+          GDY+KLR+     EEG    EP +PRR   G +W+W 
Sbjct: 8   DDGGVVPELTLRM----------GDYVKLRQPAECEEEGFGDVEPSTPRR--RGLIWWWA 55

Query: 57  KLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVFASVALFPTLL 116
           K+A     +G+LA VF+KWVGPFFMDKE++PIINWETTTFSTPVLA+++F SVALFPTLL
Sbjct: 56  KVALLCVVLGVLAGVFLKWVGPFFMDKELMPIINWETTTFSTPVLALVIFGSVALFPTLL 115

Query: 117 LPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQ 162
           LPS+PSMWVAGMTFGYG GFLLI++ VAVG+SLPY IGS F H+IQ
Sbjct: 116 LPSTPSMWVAGMTFGYGLGFLLIIAGVAVGVSLPYIIGSLFHHKIQ 161

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356565329|ref|XP_003550894.1| PREDICTED: uncharacterized protein LOC100788409 [Glycine max]

 Score =  196 bits (497), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 105/174 (60%), Positives = 124/174 (71%), Gaps = 16/174 (9%)

Query: 1   MTYYEDD------EVVPELTLRIDIDENNNNNKGDYLKLREYEE--GEPGSPRRWS---- 48
           MTYYE D      EVVP++TL I  D+ N    GDY+KLR   +    PG+    S    
Sbjct: 1   MTYYETDGGGRREEVVPDVTLTIQSDDGN----GDYVKLRANADDGSPPGAAAELSPPTL 56

Query: 49  CGKVWYWVKLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVFAS 108
              VWYWVKL      +G LA V + WVGP+F+DKE+IPIINWET TFSTPVL VLVFAS
Sbjct: 57  RAAVWYWVKLVVLFLFLGFLAVVVLVWVGPYFIDKEIIPIINWETETFSTPVLTVLVFAS 116

Query: 109 VALFPTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQ 162
           VA+FPTLLLPS+PSMWVAGMTFGYGFGFLLI+SA A+G+SLP+ IG  F H+I+
Sbjct: 117 VAIFPTLLLPSTPSMWVAGMTFGYGFGFLLIISAAAIGVSLPFVIGKLFHHKIE 170

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224058645|ref|XP_002299582.1| predicted protein [Populus trichocarpa] gi|222846840|gb|EEE84387.1| predicted protein [Populus trichocarpa]

 Score =  195 bits (495), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 112/168 (66%), Positives = 133/168 (79%), Gaps = 7/168 (4%)

Query: 1   MTYYEDDEVVPELTLRIDIDENNNNNKGDYLKLREYEEGEPGSPRRWSC-----GKV-WY 54
           MTYYEDD VV ++ +R++ D+ ++N+KGDY+ LR+ E G       + C     G V WY
Sbjct: 1   MTYYEDDSVVLDVRMRMEGDKIDDNSKGDYVNLRD-ENGAGERCNHFGCCWGLGGSVFWY 59

Query: 55  WVKLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVFASVALFPT 114
           WVKLA   T  GLLAA  ++WVGPF MDKE+IPIINWETTTFSTPVL VL+FASVAL PT
Sbjct: 60  WVKLAVTFTFFGLLAAACVEWVGPFLMDKEIIPIINWETTTFSTPVLVVLLFASVALLPT 119

Query: 115 LLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQ 162
           LLLPSSPSMWVAGMTFGYGFGFLLI++A AVG+SLPYFIGS FLH+I+
Sbjct: 120 LLLPSSPSMWVAGMTFGYGFGFLLIITAAAVGVSLPYFIGSLFLHKIR 167

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513717|ref|XP_003525557.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Glycine max]

 Score =  194 bits (494), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 104/176 (59%), Positives = 124/176 (70%), Gaps = 20/176 (11%)

Query: 1   MTYYEDD------EVVPELTLRIDIDENNNNNKGDYLKLREYEE--------GEPGSPRR 46
           MTYYE+D      EVVP++TL I  D++N    GDY+KLR             EP  P  
Sbjct: 1   MTYYENDGGGRREEVVPDVTLTIQSDDSN----GDYVKLRANNNDGSPPGAAAEPSPPTI 56

Query: 47  WSCGKVWYWVKLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVF 106
            +   VWYWVKL      +G LA V + WVGP+F+DKE+IPIINWET TFSTPVL VLVF
Sbjct: 57  RAA--VWYWVKLVVLFLFLGFLAVVVLVWVGPYFIDKEIIPIINWETETFSTPVLTVLVF 114

Query: 107 ASVALFPTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQ 162
            SVA+FPTLLLPS+PSMWVAGMTFGYGFGFLLI+SA A+G+SLP+ IG  F H+I+
Sbjct: 115 TSVAVFPTLLLPSTPSMWVAGMTFGYGFGFLLIISAAAIGVSLPFVIGKLFHHKIE 170

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|8778630|gb|AAF79638.1|AC025416_12 F5O11.19 [Arabidopsis thaliana]

 Score =  185 bits (469), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 98/174 (56%), Positives = 122/174 (70%), Gaps = 12/174 (6%)

Query: 1   MTYYED-DEVVPELTLRIDIDENNNNNKGDYLKLR----EYEEGEPGSPRRWSCGKV--- 52
           MTY    D  VPEL LR++ D +N    GDYLKLR    E +EG      R   G V   
Sbjct: 1   MTYSNGVDGTVPELKLRVEEDSDN----GDYLKLRGGSNEEDEGSSAESSRCPIGSVTSV 56

Query: 53  WYWVKLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVFASVALF 112
           W+WVKL   +  +G LA V IKWVGPF ++KE+IP INW   TFS PVL +L+FASVALF
Sbjct: 57  WFWVKLISLVVCLGSLAFVIIKWVGPFLIEKELIPFINWVRNTFSIPVLGLLLFASVALF 116

Query: 113 PTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQVCII 166
           P++LLPSSPSMW+AG+TFGYG GFLLI+SA ++G++LP+ IG  FLH++QV II
Sbjct: 117 PSILLPSSPSMWMAGLTFGYGKGFLLILSAASIGVTLPFLIGHLFLHKMQVSII 170

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15221330|ref|NP_172707.1| SNARE associated Golgi protein family [Arabidopsis thaliana] gi|34222066|gb|AAQ62869.1| At1g12450 [Arabidopsis thaliana] gi|62320872|dbj|BAD93843.1| hypothetical protein [Arabidopsis thaliana] gi|332190763|gb|AEE28884.1| SNARE associated Golgi protein family [Arabidopsis thaliana]

 Score =  181 bits (460), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 95/170 (55%), Positives = 119/170 (70%), Gaps = 12/170 (7%)

Query: 1   MTYYED-DEVVPELTLRIDIDENNNNNKGDYLKLR----EYEEGEPGSPRRWSCGKV--- 52
           MTY    D  VPEL LR++ D +N    GDYLKLR    E +EG      R   G V   
Sbjct: 1   MTYSNGVDGTVPELKLRVEEDSDN----GDYLKLRGGSNEEDEGSSAESSRCPIGSVTSV 56

Query: 53  WYWVKLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVFASVALF 112
           W+WVKL   +  +G LA V IKWVGPF ++KE+IP INW   TFS PVL +L+FASVALF
Sbjct: 57  WFWVKLISLVVCLGSLAFVIIKWVGPFLIEKELIPFINWVRNTFSIPVLGLLLFASVALF 116

Query: 113 PTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQ 162
           P++LLPSSPSMW+AG+TFGYG GFLLI+SA ++G++LP+ IG  FLH++Q
Sbjct: 117 PSILLPSSPSMWMAGLTFGYGKGFLLILSAASIGVTLPFLIGHLFLHKMQ 166

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357476997|ref|XP_003608784.1| TVP38/TMEM64 family membrane protein slr0305 [Medicago truncatula] gi|355509839|gb|AES90981.1| TVP38/TMEM64 family membrane protein slr0305 [Medicago truncatula]

 Score =  179 bits (453), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 92/166 (55%), Positives = 118/166 (71%), Gaps = 16/166 (9%)

Query: 8   EVVPELTLRIDIDENNNNNKGDYLKLREYEEG-----------EPGSPRRWSCGKVWYWV 56
           EVV ++T+ I+ D   ++NKGDY+KL    +            E   P R S   VWYWV
Sbjct: 20  EVVSDVTITIEAD---DDNKGDYIKLIPGSDECLPLTAVEMVEECSLPSRRSV--VWYWV 74

Query: 57  KLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVFASVALFPTLL 116
           K+     S+G LA   +KWVGP+ +DKEVIPIINWET TFS PVL +L+FASVA+FPT+L
Sbjct: 75  KMVLLFLSLGFLAVAVLKWVGPYLIDKEVIPIINWETETFSPPVLTILLFASVAIFPTIL 134

Query: 117 LPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQ 162
           LPS+PSMWVAG+T GYGFGFLLI++A A+G+SLP+ IGS F H+I+
Sbjct: 135 LPSTPSMWVAGVTLGYGFGFLLIITAAAIGVSLPFIIGSIFHHKIE 180

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356497185|ref|XP_003517443.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Glycine max]

 Score =  176 bits (446), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 89/162 (54%), Positives = 116/162 (71%), Gaps = 1/162 (0%)

Query: 1   MTYYEDDEVVPELTLRIDIDENNNNNKGDYLKLREYEEGEPGSPRRWSCGKVWYWVKLAF 60
           MTY+E+D +  +   R+   E N++  G+Y+KL    + E     R    ++WYWVKL  
Sbjct: 1   MTYFEEDAINDDGD-RVRDVERNHDGGGEYVKLVWDPQPEAVPTHRGGSSRLWYWVKLVL 59

Query: 61  FLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVFASVALFPTLLLPSS 120
               +GLLA V  +WV P F++K +IPII WET TFS+PVLAVL+FAS+ALFPTL+LPSS
Sbjct: 60  CFLCLGLLALVAFEWVAPLFIEKVIIPIIKWETNTFSSPVLAVLLFASIALFPTLILPSS 119

Query: 121 PSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQ 162
           PSMWVAG+ FGYGFGFLLI+SA AVG+SLP+ IGS F  +I+
Sbjct: 120 PSMWVAGLKFGYGFGFLLIISAAAVGVSLPFLIGSIFHSKIE 161

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	171
TAIR|locus:2034710	303	AT1G12450 "AT1G12450" [Arabido	0.923	0.521	0.452	8.5e-33
TAIR|locus:2132669	296	AT4G22850 "AT4G22850" [Arabido	0.923	0.533	0.425	4.2e-31
TAIR|locus:2118096	306	AT4G12000 [Arabidopsis thalian	0.935	0.522	0.396	3.9e-28
TAIR|locus:2056246	320	AT2G02370 "AT2G02370" [Arabido	0.643	0.343	0.383	9e-16

TAIR|locus:2034710 AT1G12450 "AT1G12450" [Arabidopsis thaliana (taxid:3702)]

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 77/170 (45%), Positives = 97/170 (57%)

Query:     1 MTYYED-DEVVPELTLRIDIDENNNNNKGDYLKLR----EYEEGEPGSPRRWSCGKV--- 52
             MTY    D  VPEL LR++ D +N    GDYLKLR    E +EG      R   G V   
Sbjct:     1 MTYSNGVDGTVPELKLRVEEDSDN----GDYLKLRGGSNEEDEGSSAESSRCPIGSVTSV 56

Query:    53 WYWVKLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPXXXXXXXXXXXXX 112
             W+WVKL   +  +G LA V IKWVGPF ++KE+IP INW   TFS P             
Sbjct:    57 WFWVKLISLVVCLGSLAFVIIKWVGPFLIEKELIPFINWVRNTFSIPVLGLLLFASVALF 116

Query:   113 XXXXXXXXXXMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQ 162
                       MW+AG+TFGYG GFLLI+SA ++G++LP+ IG  FLH++Q
Sbjct:   117 PSILLPSSPSMWMAGLTFGYGKGFLLILSAASIGVTLPFLIGHLFLHKMQ 166

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2132669 AT4G22850 "AT4G22850" [Arabidopsis thaliana (taxid:3702)]

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 71/167 (42%), Positives = 94/167 (56%)

Query:     1 MTYYEDDEVVPELTLRIDIDENNNNNKGDYLKLREY-EEGEPGSPRR----WSCGKVWYW 55
             MT  ED++ V EL +R++ D+     KG Y+KL E  E+G+     +        + W+W
Sbjct:     1 MTVTEDEKPVLELLVRVEDDDE----KGPYVKLSEVLEKGQESEQEKEEEKTDSSRFWFW 56

Query:    56 VKLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPXXXXXXXXXXXXXXXX 115
             VKL+     +  LA V   W+GP  MDKE+IP+I WE  TF+ P                
Sbjct:    57 VKLSLLFAFLAALAVVGYIWIGPLIMDKELIPLIQWEIRTFTHPVCGLLVFASVAIFPTI 116

Query:   116 XXXXXXXMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQ 162
                    MW+AGMTFGYG+GFLLI+SA AVG+SLPYFIG  F H+IQ
Sbjct:   117 LLPSTPSMWIAGMTFGYGYGFLLIISAAAVGVSLPYFIGQLFCHKIQ 163

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2118096 AT4G12000 [Arabidopsis thaliana (taxid:3702)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 69/174 (39%), Positives = 95/174 (54%)

Query:     1 MTYYEDDEVVPELTLRIDIDENNNNNKGDYLKL--------REYEEGEPGSPRRWS-CGK 51
             MTY+E+D+ V E   R+ ++E+  +  G Y+KL        +E E+    SP   S CG+
Sbjct:     1 MTYHEEDDTVSEF--RVRVEEDGVDKLGHYVKLTEDFEVHRQETEQESSSSPSSSSSCGQ 58

Query:    52 ---VWYWVKLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPXXXXXXXXX 108
                VW+W+KL  F T +  L     KW+ P  MDKE+IP+I WE  TF+ P         
Sbjct:    59 KRSVWFWIKLGLFFTFLTALGLAGYKWLYPLIMDKELIPLIKWEMETFTHPVCGILVFAS 118

Query:   109 XXXXXXXXXXXXXXMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQ 162
                           MWVAG+TFGY +G LL + AVA+G+SLPYFI   FL++IQ
Sbjct:   119 VSLFPVILIPTTPSMWVAGITFGYFYGLLLTLPAVAIGVSLPYFISYLFLNKIQ 172

GO:0005886 "plasma membrane" evidence=ISM

GO:0006979 "response to oxidative stress" evidence=IMP

TAIR|locus:2056246 AT2G02370 "AT2G02370" [Arabidopsis thaliana (taxid:3702)]

 Score = 199 (75.1 bits), Expect = 9.0e-16, P = 9.0e-16
 Identities = 43/112 (38%), Positives = 55/112 (49%)

Query:    51 KVWYWVKLAFFLTSVGLLAA-VFIKWVGPFFMDKEVIPIINWETTTFSTPXXXXXXXXXX 109
             K  +W+K A  + +V LL   VF KW  PF   K +IPI+ WE T F  P          
Sbjct:    51 KFMWWLK-ALGICAVALLLTLVFGKWGVPFVFQKVLIPILQWEATAFGRPMLAIVLVVSL 109

Query:   110 XXXXXXXXXXXXXMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRI 161
                          MW+AGM FGYG GF++IM    +G+ LPY IG  F  R+
Sbjct:   110 ALFPVFLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLMFRDRL 161


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.143   0.473    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      171       148   0.00068  104 3  11 22  0.42    31
                                                     30  0.39    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  171 KB (2099 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.36u 0.16s 15.52t   Elapsed:  00:00:01
  Total cpu time:  15.36u 0.16s 15.52t   Elapsed:  00:00:01
  Start:  Mon May 20 19:04:36 2013   End:  Mon May 20 19:04:37 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	171
PF09335	123	SNARE_assoc: SNARE associated Golgi protein; Inter	98.18
COG0398	223	Uncharacterized conserved protein [Function unknow	97.84
PRK10847	219	hypothetical protein; Provisional	95.34
COG0586	208	DedA Uncharacterized membrane-associated protein [	92.75
KOG3140	275	consensus Predicted membrane protein [Function unk	80.03

>PF09335 SNARE_assoc: SNARE associated Golgi protein; InterPro: IPR015414 This is a entry contains SNARE associated Golgi proteins

Probab=98.18  E-value=3.5e-06  Score=60.45  Aligned_cols=49  Identities=31%  Similarity=0.533  Sum_probs=44.0

Q ss_pred             cCCChhHHHHhhHhhhhhHHHHHHHHhhhhchhhHHHHHHhH-HHHHHHH
Q 030796          117 LPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFL-HRIQVCI  165 (171)
Q Consensus       117 lPSsPsMWlAGm~FGYg~GFLiIm~g~~IGmsLPyfIG~lF~-~rI~~WL  165 (171)
                      +|+++.+..+|..||.+.|+++...|+++|-.+.|++|+.++ ++.++.+
T Consensus         1 iP~~~~~~~~g~~~g~~~~~~~~~~g~~~g~~~~y~lgr~~~~~~~~~~~   50 (123)
T PF09335_consen    1 IPGSILLIAAGALFGPWLGFLIATLGAVLGSLLAYLLGRYFGRRRLRRKL   50 (123)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence            699999999999999999999999999999999999999887 4444444

The yeast member of this family (P36164 from SWISSPROT) localises with the t-SNARE Tlg2 [].

>COG0398 Uncharacterized conserved protein [Function unknown]

Probab=97.84  E-value=6e-05  Score=63.14  Aligned_cols=93  Identities=14%  Similarity=0.253  Sum_probs=64.3

Q ss_pred             HHHHHHHhhcceecccchhhhhhhhhhccCcceeehh-hhhhhcccceeccCCChhHHHHhhHhhhhhHHHHHHHHhhhh
Q 030796           68 LAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVL-VFASVALFPTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVG  146 (171)
Q Consensus        68 l~~v~~kW~~P~~~~KvliPim~Wea~tF~~pvla~v-l~aS~AlFP~~LlPSsPsMWlAGm~FGYg~GFLiIm~g~~IG  146 (171)
                      +...+..+...+...-..--+.+|- ++.|. -.+++ +++-++...+..+|.++..-.+|.+||-..|+++.+.|+++|
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~l~~~i-~~~g~-~~pl~~fil~~l~~~~~~iP~~il~l~~g~ifG~~~G~~~s~~G~~~g   95 (223)
T COG0398          18 GVIIGIIYLGLLVLLLDPETLREWI-QAYGA-LGPLVFFILLYLVATLPIIPGSILTLAGGLLFGPFLGFLYSLIGATAG   95 (223)
T ss_pred             HHHHHHHHHHHHHhccCHHHHHHHH-HHcCc-hHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            3344444544444444444556665 33332 22233 444555566678899999999999999999999999999999


Q ss_pred             chhhHHHHH-HhHHHHH
Q 030796          147 ISLPYFIGS-HFLHRIQ  162 (171)
Q Consensus       147 msLPyfIG~-lF~~rI~  162 (171)
                      -.+.|++++ +.|++.+
T Consensus        96 s~~~Fll~R~~gr~~~~  112 (223)
T COG0398          96 STLAFLLARYLGRDWVL  112 (223)
T ss_pred             HHHHHHHHHHHhHHHHH
Confidence            999999999 4444443

>PRK10847 hypothetical protein; Provisional

Probab=95.34  E-value=0.028  Score=46.28  Aligned_cols=61  Identities=28%  Similarity=0.444  Sum_probs=46.2

Q ss_pred             eehhhhhhhcccceeccCCChhHHHHhhHhh-------hhhHHHHHHHHhhhhchhhHHHHHHhHHHH
Q 030796          101 LAVLVFASVALFPTLLLPSSPSMWVAGMTFG-------YGFGFLLIMSAVAVGISLPYFIGSHFLHRI  161 (171)
Q Consensus       101 la~vl~aS~AlFP~~LlPSsPsMWlAGm~FG-------Yg~GFLiIm~g~~IGmsLPyfIG~lF~~rI  161 (171)
                      +.++.+..-.+.+...+|+...+-++|...+       +...++..+.|+.+|-.+-|++|+.+.+|+
T Consensus        33 lfl~~~le~~~~~~~~lPge~~l~~~G~la~~~~~~~~~~~~~~~a~~Ga~lG~~i~Y~lGr~~G~~~  100 (219)
T PRK10847         33 LFLILFCETGLVVTPFLPGDSLLFVAGALASLPTNDLNVHMMVALMLIAAIVGDAVNYTIGRLFGEKL  100 (219)
T ss_pred             HHHHHHHHhccccCCCCCchHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence            3444444444456677899999999998866       335688889999999999999999875443

>COG0586 DedA Uncharacterized membrane-associated protein [Function unknown]

Probab=92.75  E-value=0.13  Score=42.19  Aligned_cols=66  Identities=20%  Similarity=0.325  Sum_probs=54.0

Q ss_pred             ccCcceeehhhhhhhcccceeccCCChhHHHHhhHhhhh-----hHHHHHHHHhhhhchhhHHHHHHhHHH
Q 030796           95 TFSTPVLAVLVFASVALFPTLLLPSSPSMWVAGMTFGYG-----FGFLLIMSAVAVGISLPYFIGSHFLHR  160 (171)
Q Consensus        95 tF~~pvla~vl~aS~AlFP~~LlPSsPsMWlAGm~FGYg-----~GFLiIm~g~~IGmsLPyfIG~lF~~r  160 (171)
                      .++-+.+.++.+.=..++....+|+-.-|-+||+.=+-+     .-++..+.|+.+|..+-|++|+.+.++
T Consensus        14 ~~~~~~~f~~~f~e~~l~~~~~lPge~iL~~~G~l~~~g~~~~~~~i~~~~lga~lGd~i~Y~iGr~~G~~   84 (208)
T COG0586          14 SLGYLGVFLILFLESGLLVGPPLPGEVLLLLAGALAAQGKLNLWLVILVATLGALLGDLISYWIGRRFGRK   84 (208)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcHH
Confidence            456666677777777888889999999999999985544     667778889999999999999988633

>KOG3140 consensus Predicted membrane protein [Function unknown]

Probab=80.03  E-value=0.6  Score=41.19  Aligned_cols=60  Identities=27%  Similarity=0.365  Sum_probs=48.0

Q ss_pred             hhhhcccceeccC-CChhHHHHhhHhhhhhHHHHHHHHhhhhchhhHHHHHHhHHHHHHHHHhh
Q 030796          106 FASVALFPTLLLP-SSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQVCIIAK  168 (171)
Q Consensus       106 ~aS~AlFP~~LlP-SsPsMWlAGm~FGYg~GFLiIm~g~~IGmsLPyfIG~lF~~rI~~WL~~~  168 (171)
                      +|....-=++-+| |..-.-.||..||-+-|.+++...++.|.++-|++.++|.   |.|+.+.
T Consensus       101 ~~~y~f~qtfaipG~~fls~~aG~l~~~~~g~~Lv~~~~~~ga~~cy~lS~~f~---r~~v~~l  161 (275)
T KOG3140|consen  101 IAAYVFLQTFAIPGSIFLSLLAGALFGVFKGVLLVCLLSTLGASLCYLLSKLFG---RPLVLKL  161 (275)
T ss_pred             HHHHHHHHhcccccHHHHHHHHHHhhccceEEeeeeeccchhHHHHHHHHHHHh---HHHHHHH
Confidence            3444444566778 7788889999999999999999999999999999998887   4444443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00