Citrus Sinensis ID: 030875

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Protein Sequence
MASGGSKSAAYILLILNLALYFIVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFGNMATGLFVIFSLLAGVVGMGTSLAGLHNVFQWDLPNLNAAAASSLITWALTLLAMGLACKEIDIGWKDSNLRTLEVMTIIVSATQLFCTGAIHAGVEDAAWKRNRMVGRV
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Coil and Loop (DISEMBL)
masggsksAAYILLILNLALYFIVTVIAAWAVNHGIQRSREAAsvlslparifpiyfpfgnmatGLFVIFSLLAGVVGMGTSlaglhnvfqwdlpnlnAAAASSLITWALTLLAMGLACkeidigwkdsnlrTLEVMTIIVSATQLFCTGAIHAGVEDAAWKRNRMVGRV
Flexible Loop (DISEMBL)
MASGGSKSAAYILLILNLALYFIVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFGNMATGLFVIFSLLAGVVGMGTSLAGLHNVFQWDLPNLNAAAASSLITWALTLLAMGLACKEIDIGWKDSNLRTLEVMTIIVSATQLFCTGAIHAGVEDAAWKRNRMVGRV
Low Complexity Region (SEG)
MASGGSKSaayillilnlalyFIVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFGNMATGLFVIFSLLAGVVGMGTSLAGLHNVFQWDLPnlnaaaasslITWALTLLAMGLACKEIDIGWKDSNLRTLEVMTIIVSATQLFCTGAIHAGVEDAAWKRNRMVGRV
Disordered region (IsUnstruct)
********AAYILLILNLALYFIVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFGNMATGLFVIFSLLAGVVGMGTSLAGLHNVFQWDLPNLNAAAASSLITWALTLLAMGLACKEIDIGWKDSNLRTLEVMTIIVSATQLFCTGAIHAGVEDAAWK********
Disordered Region (DISOPRED)
**********YILLILNLALYFIVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFGNMATGLFVIFSLLAGVVGMGTSLAGLHNVFQWDLPNLNAAAASSLITWALTLLAMGLACKEIDIGWKDSNLRTLEVMTIIVSATQLFCTGAIHAGVEDAAWK********
Disordered Region (DISEMBL)
********AAYILLILNLALYFIVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFGNMATGLFVIFSLLAGVVGMGTSLAGLHNVFQWDLPNLNAAAASSLITWALTLLAMGLACKEIDIGWKDSNLRTLEVMTIIVSATQLFCTGAIHAGVEDAAWKRNRMVGRV
Disordered Region (DISPRO)
*****SKSAAYILLILNLALYFIVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFGNMATGLFVIFSLLAGVVGMGTSLAGLHNVFQWDLPNLNAAAASSLITWALTLLAMGLACKEIDIGWKDSNLRTLEVMTIIVSATQLFCTGAIHAGVEDAAW*********
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASGGSKSAAYILLILNLALYFIVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFGNMATGLFVIFSLLAGVVGMGTSLAGLHNVFQWDLPNLNAAAASSLITWALTLLAMGLACKEIDIGWKDSNLRTLEVMTIIVSATQLFCTGAIHAGVEDAAWKRNRMVGRV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	170
15239619	171	AWPM-19-like protein [Arabidopsis thalia	1.0	0.994	0.748	2e-68
297812075	171	hypothetical protein ARALYDRAFT_488781 [	1.0	0.994	0.754	4e-68
255551513	164	conserved hypothetical protein [Ricinus	0.964	1.0	0.731	2e-65
356520026	167	PREDICTED: uncharacterized protein LOC10	0.982	1.0	0.747	2e-64
356563662	167	PREDICTED: uncharacterized protein LOC10	0.982	1.0	0.747	6e-64
388512097	164	unknown [Medicago truncatula]	0.958	0.993	0.717	5e-58
224102577	170	predicted protein [Populus trichocarpa]	1.0	1.0	0.688	5e-57
225432494	168	PREDICTED: uncharacterized protein LOC10	0.982	0.994	0.694	3e-53
449432761	169	PREDICTED: uncharacterized protein LOC10	0.882	0.887	0.64	2e-51
125552263	169	hypothetical protein OsI_19891 [Oryza sa	0.994	1.0	0.576	8e-44

>gi|15239619|ref|NP_197398.1| AWPM-19-like protein [Arabidopsis thaliana] gi|21536663|gb|AAM60995.1| plasma membrane associated protein-like [Arabidopsis thaliana] gi|332005251|gb|AED92634.1| AWPM-19-like protein [Arabidopsis thaliana]

 Score =  263 bits (672), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 128/171 (74%), Positives = 151/171 (88%), Gaps = 1/171 (0%)

Query: 1   MASGGSKSAAYILLILNLALYFIVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFG 60
           MASGGSKSAA++LL+LNL LYF++T+IA+WAVNHGI+R+RE+AS LSLPA+IFPIYFP G
Sbjct: 1   MASGGSKSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVG 60

Query: 61  NMATGLFVIFSLLAGVVGMGTSLAGLHNVFQWDLPNLNAAAASSLITWALTLLAMGLACK 120
           NMATG FVIF+L+AGVVGM TSL G+ NV QWD PNL++AAASSLI+W+LTLLAMGLACK
Sbjct: 61  NMATGFFVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACK 120

Query: 121 EIDIGWKDSNLRTLEVMTIIVSATQLFCTGAIHAGV-EDAAWKRNRMVGRV 170
           EI+IGW ++NLRTLEV+TIIVSATQL CTGAIHAGV E  A      +GRV
Sbjct: 121 EINIGWTEANLRTLEVLTIIVSATQLLCTGAIHAGVGETVASGERPHLGRV 171

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297812075|ref|XP_002873921.1| hypothetical protein ARALYDRAFT_488781 [Arabidopsis lyrata subsp. lyrata] gi|297319758|gb|EFH50180.1| hypothetical protein ARALYDRAFT_488781 [Arabidopsis lyrata subsp. lyrata]

 Score =  262 bits (669), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 129/171 (75%), Positives = 150/171 (87%), Gaps = 1/171 (0%)

Query: 1   MASGGSKSAAYILLILNLALYFIVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFG 60
           MASGGSKSAA++LL+LNL LYF+VTVIA+WAVNHGI+R+ E+AS LSLPA+IFPIYFP G
Sbjct: 1   MASGGSKSAAFMLLMLNLGLYFVVTVIASWAVNHGIERTHESASTLSLPAKIFPIYFPVG 60

Query: 61  NMATGLFVIFSLLAGVVGMGTSLAGLHNVFQWDLPNLNAAAASSLITWALTLLAMGLACK 120
           NMATG FVIF+L+AGVVGM TSL G+ NV QWD PNL++AAASSLI+W+LTLLAMGLACK
Sbjct: 61  NMATGFFVIFTLIAGVVGMATSLTGILNVLQWDSPNLHSAAASSLISWSLTLLAMGLACK 120

Query: 121 EIDIGWKDSNLRTLEVMTIIVSATQLFCTGAIHAGV-EDAAWKRNRMVGRV 170
           EI+IGW ++NLRTLEV+TIIVSATQL CTGAIHAGV E  A      +GRV
Sbjct: 121 EINIGWTEANLRTLEVLTIIVSATQLVCTGAIHAGVGETVAAGERPHLGRV 171

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255551513|ref|XP_002516802.1| conserved hypothetical protein [Ricinus communis] gi|223543890|gb|EEF45416.1| conserved hypothetical protein [Ricinus communis]

 Score =  253 bits (646), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 120/164 (73%), Positives = 143/164 (87%)

Query: 1   MASGGSKSAAYILLILNLALYFIVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFG 60
           MASG SKSAA++L I+N+ALYFI+ VIA+WA+NHGI R+RE ASVLS+PARIFPIYFP G
Sbjct: 1   MASGASKSAAFLLFIINIALYFIIVVIASWAINHGIIRTRETASVLSIPARIFPIYFPMG 60

Query: 61  NMATGLFVIFSLLAGVVGMGTSLAGLHNVFQWDLPNLNAAAASSLITWALTLLAMGLACK 120
           NMATG F+IFSLLAG+VG+  SL GLHN+ Q ++PNL+ AAASS+   +LTLLAMGLACK
Sbjct: 61  NMATGPFIIFSLLAGIVGIAASLTGLHNMLQLNVPNLHTAAASSVTALSLTLLAMGLACK 120

Query: 121 EIDIGWKDSNLRTLEVMTIIVSATQLFCTGAIHAGVEDAAWKRN 164
           EIDIGW DSNLRTLEV+TIIVSATQLFCTGAI+ GV+D A + +
Sbjct: 121 EIDIGWTDSNLRTLEVVTIIVSATQLFCTGAIYVGVQDVAARSS 164

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520026|ref|XP_003528667.1| PREDICTED: uncharacterized protein LOC100779785 [Glycine max]

 Score =  250 bits (638), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 127/170 (74%), Positives = 138/170 (81%), Gaps = 3/170 (1%)

Query: 1   MASGGSKSAAYILLILNLALYFIVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFG 60
           MASG SKS A ILL+LNL LYFIV VIA+WAVNHGIQRS E ASVLS+PARIFPIYFP G
Sbjct: 1   MASG-SKSVASILLVLNLVLYFIVLVIASWAVNHGIQRSGETASVLSIPARIFPIYFPMG 59

Query: 61  NMATGLFVIFSLLAGVVGMGTSLAGLHNVFQWDLPNLNAAAASSLITWALTLLAMGLACK 120
           NM TG FVIFSL+AGVVG  TSL GL N+ QW+ PNL+AAA SSL TWALTLLAMG ACK
Sbjct: 60  NMTTGFFVIFSLVAGVVGFTTSLTGLQNILQWNAPNLHAAAMSSLTTWALTLLAMGFACK 119

Query: 121 EIDIGWKDSNLRTLEVMTIIVSATQLFCTGAIHAGVEDAAWKRNRMVGRV 170
           EI++GW DSNLRTLE +TIIVSATQL CTG IH GV +      RM GRV
Sbjct: 120 EIELGWTDSNLRTLETITIIVSATQLLCTGVIHVGVSEVV--AQRMGGRV 167

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563662|ref|XP_003550080.1| PREDICTED: uncharacterized protein LOC100808359 [Glycine max]

 Score =  248 bits (633), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 127/170 (74%), Positives = 137/170 (80%), Gaps = 3/170 (1%)

Query: 1   MASGGSKSAAYILLILNLALYFIVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFG 60
           MASG SKS A ILL LNL LYFIV VIA+WAVNHGIQRS E ASVLS+PARIFPIYFP G
Sbjct: 1   MASG-SKSVASILLALNLVLYFIVLVIASWAVNHGIQRSGETASVLSIPARIFPIYFPMG 59

Query: 61  NMATGLFVIFSLLAGVVGMGTSLAGLHNVFQWDLPNLNAAAASSLITWALTLLAMGLACK 120
           NM TG FVI SL+AGVVG  TSL GL N+FQW+ PNL+AAA SSL TWALTLLAMG ACK
Sbjct: 60  NMTTGFFVILSLVAGVVGFTTSLTGLQNIFQWNAPNLHAAAMSSLTTWALTLLAMGFACK 119

Query: 121 EIDIGWKDSNLRTLEVMTIIVSATQLFCTGAIHAGVEDAAWKRNRMVGRV 170
           EI++GW DSNLRTLE +TIIVSATQL CTG IH GV +      RM GRV
Sbjct: 120 EIELGWTDSNLRTLETITIIVSATQLLCTGVIHVGVSEVV--AQRMGGRV 167

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388512097|gb|AFK44110.1| unknown [Medicago truncatula]

 Score =  228 bits (582), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 117/163 (71%), Positives = 133/163 (81%)

Query: 1   MASGGSKSAAYILLILNLALYFIVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFG 60
           MASGGSKS A +LL LNL LYFIV VIA+WA+NHGIQRS EAASVL+ PA IFPIYFP G
Sbjct: 1   MASGGSKSVALVLLTLNLVLYFIVIVIASWAMNHGIQRSGEAASVLTTPAHIFPIYFPMG 60

Query: 61  NMATGLFVIFSLLAGVVGMGTSLAGLHNVFQWDLPNLNAAAASSLITWALTLLAMGLACK 120
           NM TG F+IF+L+AGVVG  TS+ GL+N+FQW+ PNLNAAA SSL TWALTLLAMG ACK
Sbjct: 61  NMTTGFFIIFTLIAGVVGFTTSVTGLNNIFQWNAPNLNAAAMSSLTTWALTLLAMGFACK 120

Query: 121 EIDIGWKDSNLRTLEVMTIIVSATQLFCTGAIHAGVEDAAWKR 163
           EI+ GW DSNLRTLE +TIIV+ATQL CT  IH G  +   +R
Sbjct: 121 EIERGWTDSNLRTLETITIIVTATQLLCTTVIHVGASEVPQRR 163

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224102577|ref|XP_002312732.1| predicted protein [Populus trichocarpa] gi|222852552|gb|EEE90099.1| predicted protein [Populus trichocarpa]

 Score =  225 bits (574), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 117/170 (68%), Positives = 141/170 (82%)

Query: 1   MASGGSKSAAYILLILNLALYFIVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFG 60
           MASG SKSAA++LLILN+ LYF++ VI +WA+NHGI RSRE A++L++PARIFPIYFP G
Sbjct: 1   MASGASKSAAFMLLILNMGLYFLMIVIGSWAINHGIVRSRETAAILTIPARIFPIYFPMG 60

Query: 61  NMATGLFVIFSLLAGVVGMGTSLAGLHNVFQWDLPNLNAAAASSLITWALTLLAMGLACK 120
           N+ATG F+I SLLAGVVG  +S+ GLHNVF W+ PNL+AA ASSL + +LTLL+MG ACK
Sbjct: 61  NLATGFFIILSLLAGVVGFTSSITGLHNVFLWNAPNLHAAYASSLASLSLTLLSMGFACK 120

Query: 121 EIDIGWKDSNLRTLEVMTIIVSATQLFCTGAIHAGVEDAAWKRNRMVGRV 170
           EIDIGW DS LRTLEV+TIIVS TQL CTGAIH GVED   ++  + GRV
Sbjct: 121 EIDIGWTDSVLRTLEVVTIIVSGTQLLCTGAIHVGVEDMVARQKNLGGRV 170

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432494|ref|XP_002277418.1| PREDICTED: uncharacterized protein LOC100263132 [Vitis vinifera] gi|297736963|emb|CBI26164.3| unnamed protein product [Vitis vinifera]

 Score =  213 bits (541), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 116/167 (69%), Positives = 135/167 (80%)

Query: 1   MASGGSKSAAYILLILNLALYFIVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFG 60
           MA+G SKSAA   LILN  LY I+T+IA+WAVNHGI+RSREAASVLS+PARIFPIYFP G
Sbjct: 1   MATGASKSAAIGFLILNFLLYGIITIIASWAVNHGIERSREAASVLSIPARIFPIYFPVG 60

Query: 61  NMATGLFVIFSLLAGVVGMGTSLAGLHNVFQWDLPNLNAAAASSLITWALTLLAMGLACK 120
           NMA+G F+I+SL+AGVVGM +S+  + NV QW+  NL+AA ASSL+TW LTLLAMGLACK
Sbjct: 61  NMASGFFIIYSLIAGVVGMVSSIISIINVIQWNPSNLHAATASSLLTWLLTLLAMGLACK 120

Query: 121 EIDIGWKDSNLRTLEVMTIIVSATQLFCTGAIHAGVEDAAWKRNRMV 167
           EI IGW DS LR LE +TIIVSATQL C G I AGVE+    R RM+
Sbjct: 121 EIHIGWADSTLRALEALTIIVSATQLLCMGMIQAGVENVEQSRLRMM 167

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432761|ref|XP_004134167.1| PREDICTED: uncharacterized protein LOC101213723 [Cucumis sativus] gi|449521223|ref|XP_004167629.1| PREDICTED: uncharacterized protein LOC101226021 [Cucumis sativus]

 Score =  206 bits (525), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 96/150 (64%), Positives = 122/150 (81%)

Query: 21  YFIVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFGNMATGLFVIFSLLAGVVGMG 80
           YFI+TVIA+WAVNH +++S E+AS L+LPAR+FPIYFPFGNMATG FVIFSL+AGV+GM 
Sbjct: 20  YFIITVIASWAVNHALEKSFESASTLTLPARLFPIYFPFGNMATGFFVIFSLIAGVMGMA 79

Query: 81  TSLAGLHNVFQWDLPNLNAAAASSLITWALTLLAMGLACKEIDIGWKDSNLRTLEVMTII 140
           +S  G+ NV +WD  N++ A+ SSL T+A+T+LAMG A KEI++GW DSNLRTLEV+TII
Sbjct: 80  SSATGITNVTKWDSSNIHTASVSSLATFAVTILAMGFAWKEIELGWTDSNLRTLEVITII 139

Query: 141 VSATQLFCTGAIHAGVEDAAWKRNRMVGRV 170
            SATQL CTGA+  GVE+      ++ GRV
Sbjct: 140 TSATQLLCTGAVQIGVEEMVVAEKQVGGRV 169

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125552263|gb|EAY97972.1| hypothetical protein OsI_19891 [Oryza sativa Indica Group]

 Score =  181 bits (459), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 98/170 (57%), Positives = 123/170 (72%), Gaps = 1/170 (0%)

Query: 1   MASGGSKSAAYILLILNLALYFIVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFG 60
           MA+GG  S +  LL LNL LY +V VIA WA+N+ I  S  +   +S P R+FPIYFP G
Sbjct: 1   MATGGPSSMSAGLLFLNLVLYVVVAVIAGWAINYSIDESFNSLQGVSPPVRLFPIYFPIG 60

Query: 61  NMATGLFVIFSLLAGVVGMGTSLAGLHNVFQWDLPNLNAAAASSLITWALTLLAMGLACK 120
           N+ATG FVIF+LLAGVVG+ TSL GLH+V Q    ++ +AAA+S++TW LTLLAMGLACK
Sbjct: 61  NLATGFFVIFALLAGVVGVSTSLTGLHDVSQGYPASMMSAAAASIVTWTLTLLAMGLACK 120

Query: 121 EIDIGWKDSNLRTLEVMTIIVSATQLFCTGAIHAGVEDAAWKRNRMVGRV 170
           EI IGW+  +LR LE  TII++ TQL C G++HAG   AA  +N MV RV
Sbjct: 121 EISIGWRPPSLRALETFTIILAGTQLLCAGSLHAGAH-AAIIQNPMVSRV 169

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	170
TAIR|locus:2179639	171	AT5G18970 "AT5G18970" [Arabido	1.0	0.994	0.649	1.3e-54
TAIR|locus:2013708	158	AT1G29520 "AT1G29520" [Arabido	0.782	0.841	0.462	5.7e-27
TAIR|locus:2151486	157	AT5G46530 "AT5G46530" [Arabido	0.782	0.847	0.432	1.4e-25
TAIR|locus:2197823	186	AT1G04560 "AT1G04560" [Arabido	0.564	0.516	0.432	2.9e-16

TAIR|locus:2179639 AT5G18970 "AT5G18970" [Arabidopsis thaliana (taxid:3702)]

 Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
 Identities = 111/171 (64%), Positives = 129/171 (75%)

Query:     1 MASGGSKSXXXXXXXXXXXXXFIVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFG 60
             MASGGSKS             F++T+IA+WAVNHGI+R+RE+AS LSLPA+IFPIYFP G
Sbjct:     1 MASGGSKSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVG 60

Query:    61 NMATGLFVIFSLLAGVVGMGTSLAGLHNVFQWDLPXXXXXXXXXXITWALTLLAMGLACK 120
             NMATG FVIF+L+AGVVGM TSL G+ NV QWD P          I+W+LTLLAMGLACK
Sbjct:    61 NMATGFFVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACK 120

Query:   121 EIDIGWKDSNLRTLEVMTIIVSATQLFCTGAIHAGV-EDAAWKRNRMVGRV 170
             EI+IGW ++NLRTLEV+TIIVSATQL CTGAIHAGV E  A      +GRV
Sbjct:   121 EINIGWTEANLRTLEVLTIIVSATQLLCTGAIHAGVGETVASGERPHLGRV 171

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2013708 AT1G29520 "AT1G29520" [Arabidopsis thaliana (taxid:3702)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 62/134 (46%), Positives = 80/134 (59%)

Query:    23 IVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFGNMATGLFVIFSLLAGVVGMGTS 82
             IV  I  WA+N  I    E    L LPA   PIYFP GN ATG FVIF+LLAGVVG  ++
Sbjct:    23 IVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFPMGNAATGFFVIFALLAGVVGAAST 82

Query:    83 LAGLHNVFQWDLPXXXXXXXXXXITWALTLLAMGLACKEIDIGWKDSNLRTLEVMTIIVS 142
             ++GL ++  W +           I W LT+LAMG A KEI++  +++ LRT+E   II+S
Sbjct:    83 ISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWKEIELQGRNAKLRTMEAFLIILS 142

Query:   143 ATQLFCTGAIHAGV 156
              TQL    A+H GV
Sbjct:   143 VTQLIYIAAVH-GV 155

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2151486 AT5G46530 "AT5G46530" [Arabidopsis thaliana (taxid:3702)]

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 58/134 (43%), Positives = 81/134 (60%)

Query:    23 IVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFGNMATGLFVIFSLLAGVVGMGTS 82
             IV  I AW++N  I       +  SLPA   PI+FP GN ATG F++F+L+AGV G  + 
Sbjct:    23 IVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPMGNAATGFFIMFALIAGVAGAASV 82

Query:    83 LAGLHNVFQWDLPXXXXXXXXXXITWALTLLAMGLACKEIDIGWKDSNLRTLEVMTIIVS 142
             ++G+ ++  W             I W+LTLLAMG  CKEI++G +++ LRT+E   II+S
Sbjct:    83 ISGISHLQSWTTTSLPAAVSAATIAWSLTLLAMGFGCKEIELGMRNARLRTMEAFLIILS 142

Query:   143 ATQLFCTGAIHAGV 156
             ATQL    AI+ GV
Sbjct:   143 ATQLLYIAAIY-GV 155

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2197823 AT1G04560 "AT1G04560" [Arabidopsis thaliana (taxid:3702)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 42/97 (43%), Positives = 58/97 (59%)

Query:    60 GNMATGLFVIFSLLAGVVGMGTSLAGLHNVFQWDLPXXXXXXXXXXITWALTLLAMGLAC 119
             GN AT  F+ FS+LA VVG+ + LAG +++  W             + WA+T LAMGLAC
Sbjct:    47 GNGATPFFLTFSILAAVVGVASKLAGANHIRFWRNDSLAAAGASSIVAWAITALAMGLAC 106

Query:   120 KEIDIG-WKDSNLRTLEVMTIIVSATQLFCTGAIHAG 155
             K+I+IG W+   L+ +E   II++ TQL     IHAG
Sbjct:   107 KQINIGGWRGWRLKMIEAFIIILTFTQLLYLMLIHAG 143


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.137   0.430    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      170       147   0.00091  103 3  11 22  0.38    31
                                                     30  0.50    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  575 (61 KB)
  Total size of DFA:  141 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.11u 0.13s 11.24t   Elapsed:  00:00:01
  Total cpu time:  11.11u 0.13s 11.24t   Elapsed:  00:00:01
  Start:  Fri May 10 01:37:46 2013   End:  Fri May 10 01:37:47 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT5G18970	AWPM-19-like membrane family protein; AWPM-19-like membrane family protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system, membrane; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- AWPM-19-like (InterPro-IPR008390); BEST Arabidopsis thaliana protein match is- AWPM-19-like membrane family protein (TAIR-AT1G29520.1); Has 99 Blast hits to 99 proteins in 14 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source- N [...] (171 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT1G29520	AWPM-19-like membrane family protein; AWPM-19-like membrane family protein; FUNCTIONS IN- molec [...] (158 aa)				•				•	0.760
	AT3G20570	plastocyanin-like domain-containing protein; plastocyanin-like domain-containing protein; FUNCT [...] (203 aa)				•					0.700
	AT1G63310	unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (154 aa)				•					0.688
	RTM1	RTM1 (restricted tev movement 1); sugar binding; Specifically restrict the long-distance moveme [...] (174 aa)				•					0.435
	ATGSTF4	ATGSTF4 (GLUTATHIONE S-TRANSFERASE F4); glutathione transferase; Encodes glutathione transferas [...] (245 aa)				•					0.419
	AT2G27140	heat shock family protein; heat shock family protein; FUNCTIONS IN- molecular_function unknown; [...] (224 aa)				•					0.406

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	170
pfam05512	142	pfam05512, AWPM-19, AWPM-19-like family	2e-60

>gnl|CDD|191295 pfam05512, AWPM-19, AWPM-19-like family

 Score =  183 bits (467), Expect = 2e-60
 Identities = 82/142 (57%), Positives = 97/142 (68%)

Query: 15  ILNLALYFIVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFGNMATGLFVIFSLLA 74
            LNL +Y IV  IA WA+NH I R   +   L LPA   PIYFP GN ATG FVIF+LLA
Sbjct: 1   FLNLCMYVIVLGIAGWALNHSIDRGFTSGPGLGLPAHFSPIYFPMGNAATGFFVIFALLA 60

Query: 75  GVVGMGTSLAGLHNVFQWDLPNLNAAAASSLITWALTLLAMGLACKEIDIGWKDSNLRTL 134
           GVVG  + L+GL +V  W   +L AAA++ L+ WALT LAMGLACKEI +G + + LRTL
Sbjct: 61  GVVGAASKLSGLSHVRSWRPESLAAAASAGLVAWALTALAMGLACKEIHLGGRGARLRTL 120

Query: 135 EVMTIIVSATQLFCTGAIHAGV 156
           E  TII+SATQL    AIHAG 
Sbjct: 121 EAFTIILSATQLLYILAIHAGS 142

Members of this family are 19 kDa membrane proteins. The levels of the plant protein AWPM-19 increase dramatically when there is an increase level of abscisic acid. The increase presence of this protein leads to greater tolerance of freezing. Length = 142

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	170
PF05512	142	AWPM-19: AWPM-19-like family; InterPro: IPR008390	100.0

>PF05512 AWPM-19: AWPM-19-like family; InterPro: IPR008390 Members of this family are 19 kDa membrane proteins

Probab=100.00  E-value=4.1e-78  Score=480.02  Aligned_cols=142  Identities=61%  Similarity=0.934  Sum_probs=140.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhcccccccccccCCCccccccccCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCC
Q 030875           15 ILNLALYFIVTVIAAWAVNHGIQRSREAASVLSLPARIFPIYFPFGNMATGLFVIFSLLAGVVGMGTSLAGLHNVFQWDL   94 (170)
Q Consensus        15 ~LNl~mY~IvlgiagWalN~~id~~~~~~~~~~~Pa~~~Piyfp~GN~AT~ffv~faLiAgVVG~aS~l~Gl~Hvr~W~~   94 (170)
                      +||||||+|++|||||++||+||++++.+|++++|+||||||||+||.||+||++|+|||||||++|+++|++|+|+||+
T Consensus         1 ~LN~~mY~ivl~iagWalN~~id~g~~~~~~~~~Pa~~~piyfp~GN~AT~ffv~faLlAgVVG~aS~l~G~~h~r~W~~   80 (142)
T PF05512_consen    1 VLNFCMYVIVLGIAGWALNRAIDHGFEIGPGLGLPAHFSPIYFPMGNAATGFFVIFALLAGVVGAASVLAGLHHVRSWRS   80 (142)
T ss_pred             CeehHHHHHHHHHHHHHHHHHhccCcccCCCCCCCCCcCceeccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHhhcCc
Confidence            48999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CchHHHHHHHHHHHHHHHHHhhhhcceeeccCCCCCchhHHHHHHHHHHHHHHHHHHHHhhh
Q 030875           95 PNLNAAAASSLITWALTLLAMGLACKEIDIGWKDSNLRTLEVMTIIVSATQLFCTGAIHAGV  156 (170)
Q Consensus        95 ~SLaaAaa~a~iAWaLTlLAmGlACKEI~lg~R~~rLrtLEaf~IIl~~TQLlY~l~lHag~  156 (170)
                      |||+||+|+++|||++|+||||+||||||+|+||+||||||+|+|||++|||+|++++|+|+
T Consensus        81 ~sLaaAaa~a~iAW~lTlLAmGlACKeI~~g~r~~rLrtlEaf~IIl~~tQLly~l~lH~g~  142 (142)
T PF05512_consen   81 ESLAAAAASALIAWALTLLAMGLACKEIHLGGRNWRLRTLEAFTIILSATQLLYLLALHAGV  142 (142)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhHheeeecCccchhhHHHHHHHHHHHHHHHHHHHHhccC
Confidence            99999999999999999999999999999999999999999999999999999999999984

The levels of the plant protein AWPM-19 increase dramatically when there is an increase level of abscisic acid. The increase presence of this protein leads to greater tolerance of freezing [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00