Citrus Sinensis ID: 031096

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160------
Protein Sequence
MSQEAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLSIHDNRAAAASNWSDGGGGAESSPRTSAASGDDWRSAFDAAANGPVSLRSYSRSASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQSGSKYF
Secondary Structure (PSIPRED)
cccccEEEHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEEHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MSQEAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLSIHDnraaaasnwsdggggaessprtsaasgddwRSAFdaaangpvslrsysrsasnghsrrysdpaengdvrsgsnsgsrrtpnrvpppppptqsgskyf
Flexible Loop (DISEMBL)
MSQEAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELlqedqnvkrrrDRYQKQSELLSKLTRQLSIHDNRAaaasnwsdggggAESSPRTSAASGDDWRSAFDAAangpvslrsysrsasnghsrrysdpaengdvrsgsnsgsrrtpnrvpppppptqsgskyf
Low Complexity Region (SEG)
MSQEAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLSIHDNRAAAASNWSDGGGGAESSPRTSAASGDDWRSAFDAAANGPVSLRSYSRSASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRVppppppTQSGSKYF
Disordered region (IsUnstruct)
******VLCQV***********************************************************************************************************************************************************
Disordered Region (DISOPRED)
**QEAVVLCQVEKAKEDMLNQLYSS*************QE*QNVKRR*DRYQKQSELLSKLTRQLSIHDNRA**********************************************************************************************
Disordered Region (DISEMBL)
MSQEAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLSIHDNRA************************DDWRSAFDAAANGPVSLR****************************************************
Disordered Region (DISPRO)
**QEAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLSIHDNRAAAA*******************************************************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSQEAVVLCQVEKAKEDMLNQLYSSVGAQSTARxxxxxxxxxxxxxxxxxxxxxSELLSKLTRQLSIHDNRAAAASNWSDGGGGAESSPRTSAASGDDWRSAFDAAANGPVSLRSYSRSASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQSGSKYF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	166	2.2.26 [Sep-21-2011]
Q9LQ55	920	Dynamin-2B OS=Arabidopsis	yes	no	0.939	0.169	0.719	9e-55
Q9SE83	914	Dynamin-2A OS=Arabidopsis	no	no	0.957	0.173	0.707	2e-51
Q39828	610	Dynamin-related protein 5	no	no	0.325	0.088	0.351	0.0005

>sp|Q9LQ55|DRP2B_ARATH Dynamin-2B OS=Arabidopsis thaliana GN=DRP2B PE=1 SV=2

 Score =  212 bits (539), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 118/164 (71%), Positives = 133/164 (81%), Gaps = 8/164 (4%)

Query: 4   EAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTR 63
           +AVVLCQVEK+KEDMLNQLYSS+ A    RIE L+QEDQNVKRRRDRYQKQS LLSKLTR
Sbjct: 761 KAVVLCQVEKSKEDMLNQLYSSISAIGNERIESLIQEDQNVKRRRDRYQKQSSLLSKLTR 820

Query: 64  QLSIHDNRAAAASNWSDGGGGAESSPRTSA-ASGDDWRSAFDAAANGPVSLRSYSRSASN 122
           QLSIHDNRAAAAS+WSD  G  ESSPRT+  +SG+DW +AF+AAA+GP SL+ Y    S 
Sbjct: 821 QLSIHDNRAAAASSWSDNSG-TESSPRTNGGSSGEDWMNAFNAAASGPDSLKRY---GSG 876

Query: 123 GHSRRYSDPAENGDVRSGSNSGSRRT-PNRVPPPPPPTQSGSKY 165
           GHSRRYSDPA+NG+  SGS   SRRT PNR+PP PP  QSGS Y
Sbjct: 877 GHSRRYSDPAQNGEDSSGSGGSSRRTTPNRLPPAPP--QSGSSY 918

Putative microtubule-associated force-producing protein, able to bind and hydrolyze GTP.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 6EC: .EC: 5EC: .EC: 5

>sp|Q9SE83|DRP2A_ARATH Dynamin-2A OS=Arabidopsis thaliana GN=DRP2A PE=1 SV=2

 Score =  201 bits (511), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/164 (70%), Positives = 130/164 (79%), Gaps = 5/164 (3%)

Query: 4   EAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTR 63
           +AVVLCQVEKAKEDMLNQLYSS+ A    RIE L+QEDQNVKRRR+RYQKQS LLSKLTR
Sbjct: 754 KAVVLCQVEKAKEDMLNQLYSSISAIGNERIESLIQEDQNVKRRRERYQKQSSLLSKLTR 813

Query: 64  QLSIHDNRAAAASNWSDGGGGAESSPRTS-AASGDDWRSAFDAAANGPVSLRSYSRSASN 122
           QLSIHDNRAAAAS++SD   G ESSPR S  +SGDDW +AF++AANGP    S S+  S 
Sbjct: 814 QLSIHDNRAAAASSYSD-NSGTESSPRASGGSSGDDWMNAFNSAANGPSD--SLSKYGSG 870

Query: 123 GHSRRYSDPAENGDVRS-GSNSGSRRTPNRVPPPPPPTQSGSKY 165
           GHSRRYSDPA+NGD  S GS S  R TPNR+PP PPPT S  +Y
Sbjct: 871 GHSRRYSDPAQNGDAASPGSGSNRRTTPNRLPPAPPPTGSAYRY 914

Microtubule-associated force-producing protein involved in clathrin-mediated vesicle trafficking from the trans-Golgi network to the central vacuole. Able to bind and hydrolyze GTP. Binds specifically to phosphatidylinositol 3-phosphate (PtdIns3P).

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A OS=Glycine max PE=2 SV=1

 Score = 43.9 bits (102), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 31/54 (57%)

Query: 4   EAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSEL 57
           +++V CQV +AK  +L+  ++ +G   T R+  LL ED  +  RR    K+ EL
Sbjct: 542 KSIVYCQVREAKRSLLDHFFTELGKMETKRLSSLLNEDPAIMERRSALAKRLEL 595

Microtubule-associated force-producing protein.

Glycine max (taxid: 3847)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
225460010	931	PREDICTED: dynamin-2B [Vitis vinifera] g	0.981	0.175	0.781	2e-59
147841234	938	hypothetical protein VITISV_043157 [Viti	0.981	0.173	0.781	2e-59
225465253	920	PREDICTED: dynamin-2B [Vitis vinifera] g	0.957	0.172	0.786	7e-59
224127734	920	predicted protein [Populus trichocarpa]	0.933	0.168	0.769	2e-57
6625788	930	dynamin homolog [Astragalus sinicus]	0.957	0.170	0.774	3e-56
51477379	921	DRP [Cucumis melo]	0.921	0.166	0.736	2e-54
357470181	922	Dynamin-2B [Medicago truncatula] gi|3555	0.945	0.170	0.796	2e-54
224120026	917	predicted protein [Populus trichocarpa]	0.831	0.150	0.76	8e-54
224129484	915	predicted protein [Populus trichocarpa]	0.855	0.155	0.776	9e-54
449447543	928	PREDICTED: dynamin-2B-like [Cucumis sati	0.945	0.169	0.760	3e-53

>gi|225460010|ref|XP_002271285.1| PREDICTED: dynamin-2B [Vitis vinifera] gi|297734796|emb|CBI17030.3| unnamed protein product [Vitis vinifera]

 Score =  233 bits (594), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 129/165 (78%), Positives = 137/165 (83%), Gaps = 2/165 (1%)

Query: 4   EAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTR 63
           +AVVLCQVEKAKEDMLNQLYSS+ AQSTARIEELL EDQNVKRRR+RYQKQS LLSKLTR
Sbjct: 767 KAVVLCQVEKAKEDMLNQLYSSISAQSTARIEELLLEDQNVKRRRERYQKQSSLLSKLTR 826

Query: 64  QLSIHDNRAAAASNWSDGGGGAESSPRTSAAS-GDDWRSAFDAAANGPVSLRS-YSRSAS 121
           QLSIHDNRA AAS+WS+G GGAESSP+TS  S GDDWRSAFDAAANGPV   S  SRS S
Sbjct: 827 QLSIHDNRATAASSWSNGVGGAESSPKTSGPSGGDDWRSAFDAAANGPVDYNSDLSRSGS 886

Query: 122 NGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQSGSKYF 166
           NGHSR YSDPA+NGDV SGSNS  R    R P PPP   SG K+F
Sbjct: 887 NGHSRHYSDPAQNGDVSSGSNSSRRTPNRRPPAPPPSGSSGYKFF 931

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147841234|emb|CAN68973.1| hypothetical protein VITISV_043157 [Vitis vinifera]

 Score =  233 bits (593), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 129/165 (78%), Positives = 137/165 (83%), Gaps = 2/165 (1%)

Query: 4   EAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTR 63
           +AVVLCQVEKAKEDMLNQLYSS+ AQSTARIEELL EDQNVKRRR+RYQKQS LLSKLTR
Sbjct: 774 KAVVLCQVEKAKEDMLNQLYSSISAQSTARIEELLLEDQNVKRRRERYQKQSSLLSKLTR 833

Query: 64  QLSIHDNRAAAASNWSDGGGGAESSPRTSAAS-GDDWRSAFDAAANGPVSLRS-YSRSAS 121
           QLSIHDNRA AAS+WS+G GGAESSP+TS  S GDDWRSAFDAAANGPV   S  SRS S
Sbjct: 834 QLSIHDNRATAASSWSNGVGGAESSPKTSGPSGGDDWRSAFDAAANGPVDYNSDLSRSGS 893

Query: 122 NGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQSGSKYF 166
           NGHSR YSDPA+NGDV SGSNS  R    R P PPP   SG K+F
Sbjct: 894 NGHSRHYSDPAQNGDVSSGSNSSRRTPNRRPPAPPPSGSSGYKFF 938

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225465253|ref|XP_002268311.1| PREDICTED: dynamin-2B [Vitis vinifera] gi|297739464|emb|CBI29646.3| unnamed protein product [Vitis vinifera]

 Score =  231 bits (589), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 129/164 (78%), Positives = 141/164 (85%), Gaps = 5/164 (3%)

Query: 4   EAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTR 63
           +AVVLCQVEK+KEDMLNQLYSSV AQSTARIEELLQEDQNVKRRR+R QKQS LL+KLT+
Sbjct: 758 KAVVLCQVEKSKEDMLNQLYSSVSAQSTARIEELLQEDQNVKRRRERNQKQSSLLAKLTK 817

Query: 64  QLSIHDNRAAAASNWSDGGGGAESSPRTSA-ASGDDWRSAFDAAANGPV-SLRSYSRSAS 121
           QLSIHDNRAAAAS+ S   GGAESSPRT   +SGDDWRSAFDAAANGP  S  + SRS +
Sbjct: 818 QLSIHDNRAAAASS-SWSNGGAESSPRTPGPSSGDDWRSAFDAAANGPTDSYSNSSRSGA 876

Query: 122 NGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQSGSKY 165
           NGHSRRYSDP++NGD  SG NSGSRRTPNR+PP PP  QSGS Y
Sbjct: 877 NGHSRRYSDPSQNGDANSGPNSGSRRTPNRLPPAPP--QSGSSY 918

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127734|ref|XP_002329164.1| predicted protein [Populus trichocarpa] gi|222870945|gb|EEF08076.1| predicted protein [Populus trichocarpa]

 Score =  226 bits (577), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/165 (76%), Positives = 137/165 (83%), Gaps = 10/165 (6%)

Query: 4   EAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTR 63
           +AVVLCQVEKAKEDMLNQLYSS+ AQSTARIEELLQEDQNVKRRR+RYQKQS LLSKLTR
Sbjct: 756 KAVVLCQVEKAKEDMLNQLYSSISAQSTARIEELLQEDQNVKRRRERYQKQSSLLSKLTR 815

Query: 64  QLSIHDNRAAAASNWSDGGGGAES---SPRTSAASGDDWRSAFDAAANGPVSLRSYSRSA 120
           QLSIHDNRAAAAS+    G GAES   SPRT+ ++GDDWRSAFDAAANGP+ + S SR A
Sbjct: 816 QLSIHDNRAAAASS-WSSGDGAESTTPSPRTNGSAGDDWRSAFDAAANGPLDIGSLSRPA 874

Query: 121 SNGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPP--PPPPTQSGS 163
           SNGHSR YS    NGDV +GSNS SRRTPNR P   PP P QSGS
Sbjct: 875 SNGHSRYYS----NGDVSTGSNSSSRRTPNRTPNRFPPAPPQSGS 915

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6625788|gb|AAF19398.1|AF203882_1 dynamin homolog [Astragalus sinicus]

 Score =  222 bits (566), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 127/164 (77%), Positives = 137/164 (83%), Gaps = 5/164 (3%)

Query: 4   EAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTR 63
           +A+VL QVEKAKEDMLNQLYSSV  QSTA+IEELL EDQNVKRRR+R QKQS LLSKLTR
Sbjct: 770 KAIVLSQVEKAKEDMLNQLYSSVSGQSTAKIEELLLEDQNVKRRRERIQKQSSLLSKLTR 829

Query: 64  QLSIHDNRAAAASNWSDGGGGAESSPRTSAASGDDWRSAFDAAANGPVSLRSYSRSASNG 123
           QLSIHDNRAAAA+NWS+  G AESSPR+S   GDDWRSAFDAAAN PVS    SRS SNG
Sbjct: 830 QLSIHDNRAAAATNWSN--GSAESSPRSSGGLGDDWRSAFDAAANSPVSRSGSSRSGSNG 887

Query: 124 HSRRYSDPAENGDV--RSGSNSGSRRTPNRVPPPPPPTQSGSKY 165
           HSR YSDPA+NGDV   S SNSGSRRTPNR+PP PP + SG KY
Sbjct: 888 HSRHYSDPAQNGDVNSSSNSNSGSRRTPNRLPPAPPGS-SGYKY 930

Source: Astragalus sinicus

Species: Astragalus sinicus

Genus: Astragalus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51477379|gb|AAU04752.1| DRP [Cucumis melo]

 Score =  216 bits (551), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 120/163 (73%), Positives = 136/163 (83%), Gaps = 10/163 (6%)

Query: 4   EAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTR 63
           +AVVLCQVEKAKEDMLNQLYSS+ AQS+A+IEELLQEDQNVKRRR+RYQKQS LLSKLTR
Sbjct: 769 KAVVLCQVEKAKEDMLNQLYSSISAQSSAKIEELLQEDQNVKRRRERYQKQSSLLSKLTR 828

Query: 64  QLSIHDNRAAAASNWSDGGGGAESSPRTSAASGDDWRSAFDAAANGPVSLRSYSRSASNG 123
           QLSIHDNR AAA+ WSD   G+ESSP+TS + GD+WRSAFDAAANG      Y RS+SNG
Sbjct: 829 QLSIHDNR-AAATGWSD--SGSESSPKTSGSPGDEWRSAFDAAANGRA---DYRRSSSNG 882

Query: 124 HSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQSGSKYF 166
           H    SD  +NGD+ SGSNS SRRTPNR+PP PP + SGS+YF
Sbjct: 883 H----SDATQNGDINSGSNSSSRRTPNRLPPAPPQSSSGSRYF 921

Source: Cucumis melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357470181|ref|XP_003605375.1| Dynamin-2B [Medicago truncatula] gi|355506430|gb|AES87572.1| Dynamin-2B [Medicago truncatula]

 Score =  216 bits (550), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/162 (79%), Positives = 140/162 (86%), Gaps = 5/162 (3%)

Query: 4   EAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTR 63
           +AVVLCQVEKAKEDMLNQLYSSV  QSTA+IEELL EDQNVKRRR+RYQKQS LLSKLTR
Sbjct: 766 KAVVLCQVEKAKEDMLNQLYSSVSGQSTAKIEELLLEDQNVKRRRERYQKQSSLLSKLTR 825

Query: 64  QLSIHDNRAAAASNWSDGGGGAESSPRTSAASGDDWRSAFDAAANGPVSLRSYSRSASNG 123
           QLSIHDNRAAAASNWS+  G AESSPR+S   GDDWR+AFDAA+NG VS RS SRS SNG
Sbjct: 826 QLSIHDNRAAAASNWSN--GSAESSPRSSGP-GDDWRTAFDAASNGSVS-RSGSRSGSNG 881

Query: 124 HSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQSGSKY 165
           HSR  SDPA+NGD+ SG NSGSRRTPNR+PP PP + SG KY
Sbjct: 882 HSRHNSDPAQNGDLNSGPNSGSRRTPNRLPPAPPGS-SGYKY 922

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120026|ref|XP_002331118.1| predicted protein [Populus trichocarpa] gi|222872846|gb|EEF09977.1| predicted protein [Populus trichocarpa]

 Score =  214 bits (546), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 114/150 (76%), Positives = 127/150 (84%), Gaps = 12/150 (8%)

Query: 4   EAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTR 63
           +AVVLCQVEKAKEDMLNQLYSS+  QSTARIEELLQEDQNVKR+R+RYQKQS LLSKLTR
Sbjct: 766 KAVVLCQVEKAKEDMLNQLYSSISTQSTARIEELLQEDQNVKRKRERYQKQSSLLSKLTR 825

Query: 64  QLSIHDNRAAAASNWSDGGGGAESSPRTSAA-SGDDWRSAFDAAANGPVSLRSYSRSASN 122
           QLSIHDNRAAAAS+WSD G GAESSPRT+ + SG+DWR+AFD+AANGPV         S 
Sbjct: 826 QLSIHDNRAAAASSWSD-GSGAESSPRTNGSLSGEDWRNAFDSAANGPV-------GPSR 877

Query: 123 GHSRRYSDPAENGDVRSGSNSGSRRTPNRV 152
            HSRR SDPA+NGDV   S +GSRRTPNR+
Sbjct: 878 SHSRRNSDPAQNGDV---SANGSRRTPNRM 904

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129484|ref|XP_002328728.1| predicted protein [Populus trichocarpa] gi|222839026|gb|EEE77377.1| predicted protein [Populus trichocarpa]

 Score =  214 bits (545), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 118/152 (77%), Positives = 128/152 (84%), Gaps = 10/152 (6%)

Query: 4   EAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTR 63
           +AVVLCQVEKAKEDMLNQLYSS+ AQSTARIEELLQEDQN KRRR+RYQKQS LLS LTR
Sbjct: 758 KAVVLCQVEKAKEDMLNQLYSSISAQSTARIEELLQEDQNAKRRRERYQKQSSLLSNLTR 817

Query: 64  QLSIHDNRAAAASNWSD-GGGGAESSPRTSA-ASGDDWRSAFDAAANGPV-SLRSYSRSA 120
           +LSIHDNRAAAASNWSD GGGGAESSPRT+  +SG+DWR+AFDAAANGP  S    SRS 
Sbjct: 818 KLSIHDNRAAAASNWSDGGGGGAESSPRTNGPSSGEDWRNAFDAAANGPADSFGGPSRS- 876

Query: 121 SNGHSRRYSDPAENGDVRSGSNSGSRRTPNRV 152
              HSRR SDPA+NGDV S S   SRRTP R+
Sbjct: 877 ---HSRRNSDPAQNGDVNSNS---SRRTPTRM 902

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449447543|ref|XP_004141527.1| PREDICTED: dynamin-2B-like [Cucumis sativus] gi|449481470|ref|XP_004156193.1| PREDICTED: dynamin-2B-like [Cucumis sativus]

 Score =  212 bits (540), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/163 (76%), Positives = 138/163 (84%), Gaps = 6/163 (3%)

Query: 4   EAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTR 63
           +AVVLCQVEKAKEDMLNQLYSS+ AQS+A+IEELLQEDQNVKRRR+RYQKQS LLSKLTR
Sbjct: 772 KAVVLCQVEKAKEDMLNQLYSSISAQSSAKIEELLQEDQNVKRRRERYQKQSSLLSKLTR 831

Query: 64  QLSIHDNRAAAASNWSDGGGGAESSPRTSAASGDDWRSAFDAAANGPVSLRSYSRSASNG 123
           QLSIHDNRAAAA  WSD   GAESSP+TS + GD+WRSAFDAAANG      Y RS+SNG
Sbjct: 832 QLSIHDNRAAAA-GWSD--SGAESSPKTSGSPGDEWRSAFDAAANGRA---DYRRSSSNG 885

Query: 124 HSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQSGSKYF 166
           HS   SDP +NGD+ SGSNS SRRTPNR+PP PP + SGS+YF
Sbjct: 886 HSGHSSDPTQNGDINSGSNSSSRRTPNRLPPAPPQSSSGSRYF 928

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
TAIR|locus:2202847	920	DL3 "dynamin-like 3" [Arabidop	0.939	0.169	0.695	6.8e-51
TAIR|locus:2012763	914	ADL6 "dynamin-like protein 6"	0.957	0.173	0.676	3.6e-49

TAIR|locus:2202847 DL3 "dynamin-like 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 536 (193.7 bits), Expect = 6.8e-51, P = 6.8e-51
 Identities = 114/164 (69%), Positives = 129/164 (78%)

Query:     4 EAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTR 63
             +AVVLCQVEK+KEDMLNQLYSS+ A    RIE L+QEDQNVKRRRDRYQKQS LLSKLTR
Sbjct:   761 KAVVLCQVEKSKEDMLNQLYSSISAIGNERIESLIQEDQNVKRRRDRYQKQSSLLSKLTR 820

Query:    64 QLSIHDNRAAAASNWSDGGGGAESSPRTSA-ASGDDWRSAFDAAANGPVSLRSYSRSASN 122
             QLSIHDNRAAAAS+WSD  G  ESSPRT+  +SG+DW +AF+AAA+GP SL+ Y    S 
Sbjct:   821 QLSIHDNRAAAASSWSDNSG-TESSPRTNGGSSGEDWMNAFNAAASGPDSLKRYG---SG 876

Query:   123 GHSRRYSDPAENGDVRSGSNSGSRRT-PNRVXXXXXXTQSGSKY 165
             GHSRRYSDPA+NG+  SGS   SRRT PNR+       QSGS Y
Sbjct:   877 GHSRRYSDPAQNGEDSSGSGGSSRRTTPNRLPPAP--PQSGSSY 918

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009504 "cell plate" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0030276 "clathrin binding" evidence=IDA

GO:0045334 "clathrin-coated endocytic vesicle" evidence=IDA

GO:0072583 "clathrin-mediated endocytosis" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2012763 ADL6 "dynamin-like protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 520 (188.1 bits), Expect = 3.6e-49, P = 3.6e-49
 Identities = 111/164 (67%), Positives = 125/164 (76%)

Query:     4 EAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTR 63
             +AVVLCQVEKAKEDMLNQLYSS+ A    RIE L+QEDQNVKRRR+RYQKQS LLSKLTR
Sbjct:   754 KAVVLCQVEKAKEDMLNQLYSSISAIGNERIESLIQEDQNVKRRRERYQKQSSLLSKLTR 813

Query:    64 QLSIHDNRAAAASNWSDGGGGAESSPRTSA-ASGDDWRSAFDAAANGPVSLRSYSRSASN 122
             QLSIHDNRAAAAS++SD  G  ESSPR S  +SGDDW +AF++AANGP    S S+  S 
Sbjct:   814 QLSIHDNRAAAASSYSDNSG-TESSPRASGGSSGDDWMNAFNSAANGPSD--SLSKYGSG 870

Query:   123 GHSRRYSDPAENGDVRS-GSNSGSRRTPNRVXXXXXXTQSGSKY 165
             GHSRRYSDPA+NGD  S GS S  R TPNR+      T S  +Y
Sbjct:   871 GHSRRYSDPAQNGDAASPGSGSNRRTTPNRLPPAPPPTGSAYRY 914


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.307   0.121   0.331    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      166       160   0.00097  106 3  11 23  0.46    32
                                                     30  0.43    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  584 (62 KB)
  Total size of DFA:  140 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.99u 0.12s 22.11t   Elapsed:  00:00:02
  Total cpu time:  21.99u 0.12s 22.11t   Elapsed:  00:00:02
  Start:  Mon May 20 20:10:49 2013   End:  Mon May 20 20:10:51 2013

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006896 "Golgi to vacuole transport" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LQ55	DRP2B_ARATH	3, ., 6, ., 5, ., 5	0.7195	0.9397	0.1695	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	166
pfam02212	90	pfam02212, GED, Dynamin GTPase effector domain	1e-07
smart00302	92	smart00302, GED, Dynamin GTPase effector domain	1e-04

>gnl|CDD|202159 pfam02212, GED, Dynamin GTPase effector domain

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 5  AVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSK 60
          A++   V ++KE +  +L   +       ++ELL+ED  + ++R   +K+ E L K
Sbjct: 29 AIMYFLVNESKESLQKELLQLL--YKKEDLDELLKEDPEIAQKRKELKKRLERLKK 82

Length = 90

>gnl|CDD|128597 smart00302, GED, Dynamin GTPase effector domain

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)

Query: 5  AVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSK 60
          A++   V ++K+ + N+L +         ++ELL+ED  +  +R   +K+ ELL K
Sbjct: 31 AIMYLLVNESKDSLQNELLA--LLYKEELLDELLEEDPEIASKRKELKKRLELLKK 84

Length = 92

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	166
smart00302	92	GED Dynamin GTPase effector domain.	99.82
PF02212	92	GED: Dynamin GTPase effector domain; InterPro: IPR	99.59
KOG0446	657	consensus Vacuolar sorting protein VPS1, dynamin,	99.42

>smart00302 GED Dynamin GTPase effector domain

Probab=99.82  E-value=4.4e-20  Score=134.24  Aligned_cols=64  Identities=25%  Similarity=0.420  Sum_probs=61.3

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 031096            1 MSQEAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLS   66 (166)
Q Consensus         1 ~VPKAIV~cqV~~AKe~Lln~Lys~Lykke~~~LeeLL~ED~~v~~RRe~c~K~LeLlkkAs~qLs   66 (166)
                      +||||||||||+.+|+.||++||.+||+  ++.+++||.|||.++++|++|.+++++|++|..-|+
T Consensus        27 ~VPKaI~~~lv~~~~~~lq~~L~~~L~~--~~~~~~LL~E~~~i~~kR~~~~~~l~~L~~A~~~l~   90 (92)
T smart00302       27 QVPKAIMYLLVNESKDSLQNELLALLYK--EELLDELLEEDPEIASKRKELKKRLELLKKARQIIA   90 (92)
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHHHHhC--cccHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            5999999999999999999999999999  778999999999999999999999999999998774

>PF02212 GED: Dynamin GTPase effector domain; InterPro: IPR003130 Dynamin GTPase effector domain found in proteins related to dynamin

Probab=99.59  E-value=1.1e-15  Score=110.13  Aligned_cols=64  Identities=31%  Similarity=0.451  Sum_probs=58.0

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 031096            1 MSQEAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLS   66 (166)
Q Consensus         1 ~VPKAIV~cqV~~AKe~Lln~Lys~Lykke~~~LeeLL~ED~~v~~RRe~c~K~LeLlkkAs~qLs   66 (166)
                      .|||+|+||+|+.+++.|+++|+.+||..+  .+++||.|||.++++|++|.++++.|++|.+-|+
T Consensus        27 ~Vpk~I~~~lv~~~~~~L~~~l~~~l~~~~--~~~~Ll~Ed~~i~~kR~~l~~~~~~L~~A~~~L~   90 (92)
T PF02212_consen   27 SVPKAIMHFLVNKSKEQLQSELLNELYDEE--DLEELLQEDPEIAEKREELKKKLERLKKAQQILS   90 (92)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCG--GCCCCT--GHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhHHhHHHHHHHHhccchH--HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            489999999999999999999999999954  4999999999999999999999999999998774

Dynamin is a GTP-hydrolysing protein that is an essential participant in clathrin-mediated endocytosis by cells. It self-assembles into 'collars' in vivo at the necks of invaginated coated pits; the self-assembly of dynamin being coordinated by the GTPase domain. Mutation studies indicate that dynamin functions as a molecular regulator of receptor-mediated endocytosis [].; GO: 0003924 GTPase activity, 0005525 GTP binding; PDB: 3ZYS_B 3SZR_A 3LJB_B 3T35_C 3T34_A 2X2F_D 2X2E_D 3SNH_A 3ZYC_D 3ZVR_A.

>KOG0446 consensus Vacuolar sorting protein VPS1, dynamin, and related proteins [Intracellular trafficking, secretion, and vesicular transport; General function prediction only]

Probab=99.42  E-value=4.1e-13  Score=126.35  Aligned_cols=67  Identities=31%  Similarity=0.337  Sum_probs=60.9

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 031096            1 MSQEAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLSIHDNR   71 (166)
Q Consensus         1 ~VPKAIV~cqV~~AKe~Lln~Lys~Lykke~~~LeeLL~ED~~v~~RRe~c~K~LeLlkkAs~qLsihdnR   71 (166)
                      .||||||||||+++|++||++|+.+||+. .++++.||+|||.+++||++|++||++|++|.   +|+++.
T Consensus       587 ~vpk~i~~~lv~~~k~~l~~~l~~~L~~~-~~~~~~ll~E~~~i~~~R~~~~~~l~~L~~a~---~ii~~~  653 (657)
T KOG0446|consen  587 TVPKALNHELLNEFKDDLPNELDQRLYAG-DEQLESLLKEDPRIKRRRELQQKRLLALQKAL---SILATV  653 (657)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhc-hhHHHHHHccCHHHHHHHHHHHHHHHHHHHHH---HHHHHH
Confidence            48999999999999999999999999994 99999999999999999999999988888875   455544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	166
3zvr_A	772	Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mito	8e-09
3szr_A	608	Interferon-induced GTP-binding protein MX1; interf	8e-05

>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A Length = 772

 Score = 52.6 bits (125), Expect = 8e-09
 Identities = 10/56 (17%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 5   AVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSK 60
            ++   +   KE + ++L +++   S      L++E     +RRD   +    L +
Sbjct: 704 TIMHLMINNTKEFIFSELLANLY--SCGDQNTLMEESAEQAQRRDEMLRMYHALKE 757

>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B Length = 608

 Score = 40.8 bits (95), Expect = 8e-05
 Identities = 6/56 (10%), Positives = 21/56 (37%), Gaps = 2/56 (3%)

Query: 5   AVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSK 60
            +    ++   + +   +   +  Q       LL+E  +   +R   +++   L++
Sbjct: 545 IIQFFMLQTYGQQLQKAMLQLL--QDKDTYSWLLKERSDTSDKRKFLKERLARLTQ 598

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	166
3szr_A	608	Interferon-induced GTP-binding protein MX1; interf	99.42
3zvr_A	772	Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mito	99.25
3t34_A	360	Dynamin-related protein 1A, linker, dynamin-relat	94.82
1yoz_A	116	Hypothetical protein AF0941; APC5573, midwest cent	80.3

>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B

Probab=99.42  E-value=1.1e-13  Score=124.67  Aligned_cols=64  Identities=11%  Similarity=0.170  Sum_probs=61.4

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 031096            1 MSQEAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLS   66 (166)
Q Consensus         1 ~VPKAIV~cqV~~AKe~Lln~Lys~Lykke~~~LeeLL~ED~~v~~RRe~c~K~LeLlkkAs~qLs   66 (166)
                      +|||+||||+|+.+++.||++|+.+||+  .+.+++||+||+.+++||++|+++++.|++|.+.|+
T Consensus       541 ~vP~~I~~~lv~~~~~~lq~~l~~~l~~--~~~~~~ll~E~~~~~~~R~~l~~~~~~L~~A~~~l~  604 (608)
T 3szr_A          541 HIPLIIQFFMLQTYGQQLQKAMLQLLQD--KDTYSWLLKERSDTSDKRKFLKERLARLTQARRRLA  604 (608)
T ss_dssp             HHHHHHHHHTTHHHHHHHHHHHHTTTTC--HHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHhc--chhHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5899999999999999999999999998  788999999999999999999999999999998775

>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A

Probab=99.25  E-value=1.8e-12  Score=122.27  Aligned_cols=63  Identities=14%  Similarity=0.265  Sum_probs=59.4

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhhh
Q 031096            1 MSQEAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQL   65 (166)
Q Consensus         1 ~VPKAIV~cqV~~AKe~Lln~Lys~Lykke~~~LeeLL~ED~~v~~RRe~c~K~LeLlkkAs~qL   65 (166)
                      +|||+|||++||.+|+-|+++|+++||+  ...+++||.|++.+++||++|.+|+.+||+|.+-+
T Consensus       700 ~~pk~im~~~vn~~k~~~~~el~~~ly~--~~~~~~lm~Es~~~~~~r~~~~~~~~~l~~a~~ii  762 (772)
T 3zvr_A          700 LMPKTIMHLMINNTKEFIFSELLANLYS--CGDQNTLMEESAEQAQRRDEMLRMYHALKEALSII  762 (772)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHTHHHHHHH--TCCTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccCHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4899999999999999999999999999  66899999999999999999999999999997654

>3t34_A Dynamin-related protein 1A, linker, dynamin-relat 1A; dynamin-like protein 1A, GTPase, membrane fission, motor Pro; HET: GDP; 2.40A {Arabidopsis thaliana} PDB: 3t35_A*

Probab=94.82  E-value=0.0028  Score=52.34  Aligned_cols=23  Identities=26%  Similarity=0.339  Sum_probs=17.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHh
Q 031096           41 DQNVKRRRDRYQKQSELLSKLTR   63 (166)
Q Consensus        41 D~~v~~RRe~c~K~LeLlkkAs~   63 (166)
                      ||+||+||+.|.|+|+||+.|-.
T Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~  355 (360)
T 3t34_A          333 DPAIMERRSAISKRLELYRAAQS  355 (360)
T ss_dssp             ----CCCTTHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            78999999999999999999854

>1yoz_A Hypothetical protein AF0941; APC5573, midwest center for structural genomics, MCSG, protein structure initiative, PSI, structural genomics; 2.00A {Archaeoglobus fulgidus} SCOP: a.253.1.1

Probab=80.30  E-value=1.4  Score=33.80  Aligned_cols=59  Identities=22%  Similarity=0.148  Sum_probs=42.1

Q ss_pred             HHHHHHHHHHHHHHHHhhccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 031096           11 VEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLSIHDNR   71 (166)
Q Consensus        11 V~~AKe~Lln~Lys~Lykke~~~LeeLL~ED~~v~~RRe~c~K~LeLlkkAs~qLsihdnR   71 (166)
                      |.+||+=+=.+=..++.+..-+.+-.+..--....+.=+.|.++|.+|  |..||++|=+|
T Consensus        23 VeeAk~L~D~eni~EmFRsD~E~I~~~f~~G~~t~EEa~~nl~~LK~Y--avSQL~~Hy~r   81 (116)
T 1yoz_A           23 VEEADKLLDQKNIFEMFRSDCEEILNLYKSGKAEKEEVQRNFYLLKTY--VVSQLSIHFER   81 (116)
T ss_dssp             GGGHHHHTCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH--HHHTHHHHHHH
T ss_pred             HHHHHHccCHHHHHHHHHhhHHHHHHHHHcCCccHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence            566655444444555555555555556666666677888999999998  78999999999

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00