Citrus Sinensis ID: 031101

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-----
Protein Sequence
MMKSKHSHNRFVRFVMLPIRALGKARDFYVRSMINCAEGRTYGQPMGGTLPKSFSARSALSSESDDYGELVRAASVRSMGHLNEIDMLLKQHMQMRSSSQQLPQQQLGSNGKARFPKSCSVGMAGFMGRIEEEKPGDLGEDGSVHTKTKSSDSVYPRSRSVAVAF
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEcccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccccccccccccccccccEcccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccccccccccccEcEccccccccccccccccccccEEcccccccccccccccEEEEc
Coil and Loop (DISEMBL)
mmkskhshnrfVRFVMLPIRALGKARDFYVRSMINcaegrtygqpmggtlpksfsarsalssesddYGELVRAASVRSMGHLNEIDMLLKQHMQMrsssqqlpqqqlgsngkarfpkscsvGMAGfmgrieeekpgdlgedgsvhtktkssdsvyprsrsvavaf
Flexible Loop (DISEMBL)
mmkskhshnrfvRFVMLPIRALGKARDFYVRSMINCAEGRTYGQPMGGTLPKSFSARSALSSESDDYGELVRAASVRSMGHLNEIDMLLKQHMQMRSSSQQLPQQQLGSNGKARFPKSCSVGMAGFMGRIEeekpgdlgedgsvhtktkssdsvyprsrsvavaf
Low Complexity Region (SEG)
MMKSKHSHNRFVRFVMLPIRALGKARDFYVRSMINCAEGRTYGQPMGGTLPKsfsarsalssesDDYGELVRAASVRSMGHLNEIDMLLKQHMQMRsssqqlpqqqlgsNGKARFPKSCSVGMAGFMGRIEEEKPGDLGEDGSVHTKTKSSDSVYPRSRSVAVAF
Disordered region (IsUnstruct)
*********RFVRFVMLPIRALGKARDFYVRSMINCAEGRTY***************************************************************************************************************************
Disordered Region (DISOPRED)
*************FVMLPIRALGKARDFYVRSMINCAEGRTYGQPMGGT**********************RAASVR***********************************************GFMGRIEEEKPGDLGEDGSVHTKTKSSDSVYPRSRSVAVAF
Disordered Region (DISEMBL)
********NRFVRFVMLPIRALGKARDFYVRSMINCAEGRTYGQPMGGTLPKS**************GELVRAASVRSMGHLNEIDMLLKQHM*******************ARFPKSCSVGMAGFMGRIEEEKP******************************
Disordered Region (DISPRO)
********NRFVRFVMLPIRALGKARDFYVRSMINCAEGRTYGQPMG****************SDDYGELVRAASVRSMGHLNEIDMLLKQHMQMRSSSQ*************************F*GRIEEEKPGDLGEDGSVHTKTKSSDSVYPRSRSVAVAF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMKSKHSHNRFVRFVMLPIRALGKARDFYVRSMINCAEGRTYGQPMGGTLPKSFSARSALSSESDDYGELVRAASVRSMGHLNEIDMLLKQHMQMRSSSQQLPQQQLGSNGKARFPKSCSVGMAGFMGRIEEEKPGDLGEDGSVHTKTKSSDSVYPRSRSVAVAF
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	165
356510594	155	PREDICTED: uncharacterized protein LOC10	0.842	0.896	0.430	3e-25
255538018	161	conserved hypothetical protein [Ricinus	0.909	0.931	0.491	6e-25
358249100	156	uncharacterized protein LOC100801557 [Gl	0.872	0.923	0.398	1e-23
359491947	149	PREDICTED: uncharacterized protein LOC10	0.836	0.926	0.457	3e-23
224063431	160	predicted protein [Populus trichocarpa]	0.909	0.937	0.423	1e-22
356564111	165	PREDICTED: uncharacterized protein LOC10	0.836	0.836	0.441	4e-22
224127240	163	predicted protein [Populus trichocarpa]	0.896	0.907	0.423	1e-21
18406291	179	uncharacterized protein [Arabidopsis tha	0.963	0.888	0.422	1e-19
356554016	171	PREDICTED: uncharacterized protein LOC10	0.860	0.830	0.416	2e-19
388502756	165	unknown [Lotus japonicus]	0.921	0.921	0.396	7e-19

>gi|356510594|ref|XP_003524022.1| PREDICTED: uncharacterized protein LOC100785988 [Glycine max]

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 95/165 (57%), Gaps = 26/165 (15%)

Query: 4   SKHSHNRFVRFVMLPIRALGKARDFYVRSMINCAEGRTYGQPMGGT-----LPKSFSARS 58
           +K   N+ V  +  P+R LGKARD YVRS+ NC     Y  P+        LP+S+SA +
Sbjct: 5   NKKKQNKLVWIITTPLRMLGKARDIYVRSITNCGHKMNYSNPVDAAGRFQALPRSYSAAT 64

Query: 59  ALSSESDDYGELVRAASVRSMGHLNEIDMLLKQHMQMRSSSQQLPQQQLGSNGKARFPKS 118
           + S  ++D+ EL+RAAS R++G+  ++D++LKQ  Q R  S         SNG    PKS
Sbjct: 65  SRSDNNEDFAELLRAASARTLGNRIDVDLVLKQQAQARPVS---------SNG---LPKS 112

Query: 119 CSVGMAGFMGRIEEEKPGDLGEDGSVHTKTKSSDSVYPRSRSVAV 163
            SVG    MGRI+E+ P DLGE G V    K+    YPRSRS AV
Sbjct: 113 TSVG----MGRIDEDTPYDLGE-GEVPVVPKA----YPRSRSYAV 148

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538018|ref|XP_002510074.1| conserved hypothetical protein [Ricinus communis] gi|223550775|gb|EEF52261.1| conserved hypothetical protein [Ricinus communis]

 Score =  119 bits (297), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/169 (49%), Positives = 104/169 (61%), Gaps = 19/169 (11%)

Query: 1   MMKSKHSHNRFVRFVMLPIRALGKARDFYVRSMINCAEGRTYGQPM---GGTLPKSFSAR 57
           M   K   ++F++   +P++ LGKARD YV+S+  CA   +YG  M    G LPKS S  
Sbjct: 1   MKDKKQKQSKFMKIATIPLKVLGKARDLYVKSITGCATRTSYGHSMSMPNGQLPKSHSMG 60

Query: 58  SALSSES-DDYGELVRAASVRSMGHLNEIDMLLKQHMQMRSSSQQLPQQQLGSNGKARFP 116
           S +SS+  DDYG+L+RAASVRS+GH NEIDMLL+Q  Q +   QQ          + + P
Sbjct: 61  STMSSDGGDDYGDLIRAASVRSLGHKNEIDMLLQQMKQQQQQQQQ----------QKQLP 110

Query: 117 KSCSVGMAGFMGRIEEEKPGDLGE-DGSVHTKTKSSDSVYPRSRSVAVA 164
           KS SVGM GFMGRIEEE   D G  DGS   K  +   +YPRSRS AVA
Sbjct: 111 KSVSVGM-GFMGRIEEENGEDEGSVDGS---KRGAKADLYPRSRSYAVA 155

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249100|ref|NP_001239737.1| uncharacterized protein LOC100801557 [Glycine max] gi|255637389|gb|ACU19023.1| unknown [Glycine max]

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 95/168 (56%), Gaps = 24/168 (14%)

Query: 1   MMKSKHSHNRFVRFVMLPIRALGKARDFYVRSMINCAEGRTYGQPMGGT-----LPKSFS 55
           M K     N+ V  +  P R LGKARD YV S+  C     Y  P+        LP+S+S
Sbjct: 1   MRKGNKKKNKLVWMIATPFRVLGKARDMYVSSITKCGHNMNYSNPVDAAGRFQALPRSYS 60

Query: 56  ARSALSSESDDYGELVRAASVRSMGHLNEIDMLLKQHMQMRSSSQQLPQQQLGSNGKARF 115
           A ++ S  ++D+ EL+RAAS R++G++ ++D+++KQ  Q ++       + + SNG    
Sbjct: 61  AATSRSDNNEDFAELLRAASARTLGNIIDVDLVVKQQAQTQT-------RPVSSNG---L 110

Query: 116 PKSCSVGMAGFMGRIEEEKPGDLGEDGSVHTKTKSSDSVYPRSRSVAV 163
           PKS SVG    MGRI+E+ P DLGE G V    K+    YPRSRS AV
Sbjct: 111 PKSTSVG----MGRIDEDTPYDLGE-GEVPVVPKA----YPRSRSYAV 149

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491947|ref|XP_003634344.1| PREDICTED: uncharacterized protein LOC100267722 [Vitis vinifera]

 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/166 (45%), Positives = 104/166 (62%), Gaps = 28/166 (16%)

Query: 2   MKSK-HSHNRFVRFVMLPIRALGKARDFYVRSMINCAEGRTYGQPMGGT--LPKSFSARS 58
           M++K H+ NRF+R + LPIR LGKA+D YVR M NCA  R YG  MGG   +P+S+S  S
Sbjct: 1   MRTKAHNQNRFMRIITLPIRVLGKAKDLYVRGMTNCAT-RGYGNNMGGPAGMPRSYSYAS 59

Query: 59  ALSSESDDYGELVRAASVRSMGHLNEIDMLLKQHMQMRSSSQQLPQQQLGSNGKARFPKS 118
           + S++++D+ ELVRAASV ++GH  +++ LL+Q    +S                  P+S
Sbjct: 60  SRSNDNEDFRELVRAASVNTLGHGVDLNALLQQSAAEKSKV---------------VPRS 104

Query: 119 CSVGMAGFMGRIEEEKP-GDLGEDGSVHTKTKSSDSVYPRSRSVAV 163
           CSVGMA    RI+E+ P  D GE   V+ K K +D +YPRSRS AV
Sbjct: 105 CSVGMA----RIDEDGPCNDFGE---VNFKAK-ADLMYPRSRSYAV 142

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063431|ref|XP_002301143.1| predicted protein [Populus trichocarpa] gi|222842869|gb|EEE80416.1| predicted protein [Populus trichocarpa]

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/170 (42%), Positives = 99/170 (58%), Gaps = 20/170 (11%)

Query: 2   MKSK-HSHNRFVRFVMLPIRALGKARDFYVRSMINCAEGRTYGQPMG------GTLPKSF 54
           MK+K H+ ++F+R V +P+R L KARD YV+S+I+C+    YG  M         LP SF
Sbjct: 1   MKTKAHNQSKFMRVVAIPVRLLCKARDVYVKSIIDCSTRMGYGHSMALPTGRYPPLPWSF 60

Query: 55  SARSALSSESDDYGELVRAASVRSMGHLNEIDMLLKQHMQMRSSSQQLPQQQLGSNGKAR 114
           S  S+  ++++DY +LVRAAS RS+G  NEI+M ++Q  Q +SS        +GS  K  
Sbjct: 61  SIGSSRCNDNEDYRKLVRAASARSLGQRNEIEMFIQQLRQQQSSI------MVGS--KMF 112

Query: 115 FPKSCSVGMAGFMGRIEEEKPGDLGEDGSVHTKTKSSDSVYPRSRSVAVA 164
            PKSC  GM G MGRI+ +KP D         K +    + PRSRS AV 
Sbjct: 113 LPKSCGFGM-GIMGRIDGDKPCDFETGAGAVVKPQ----LGPRSRSFAVG 157

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564111|ref|XP_003550300.1| PREDICTED: uncharacterized protein LOC100793150 [Glycine max]

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 96/170 (56%), Gaps = 32/170 (18%)

Query: 1   MMKSK-HSHNRFVRFVMLPIRALGKARDFYVRSMINCAEGRTY--GQPM--GGTLPKSFS 55
           MM+SK  S N+FVR +  PIRALGKARD YVRS+ NC +  +Y  G P    G   +S S
Sbjct: 1   MMRSKKQSQNKFVRIMASPIRALGKARDMYVRSITNCGQHVSYYGGDPTEGAGRFSRSHS 60

Query: 56  ARSALSSE--SDDYGELVRAASVRSMGHLNEIDMLLKQHMQMRSSSQQLPQQQLGSNGKA 113
             ++  SE  S+DY EL+RAAS R++ +  ++D++LKQ            QQ   S+   
Sbjct: 61  VATSTRSEVVSEDYAELLRAASARTLANRIDMDLVLKQ------------QQHANSSKGN 108

Query: 114 RFPKSCSVGMAGFMGRIEEEKPGDLGEDGSVHTKTKSSDSVYPRSRSVAV 163
             PKS SVGMA    RIEE+KP D  E G   +        YPRSRS AV
Sbjct: 109 NLPKSSSVGMA----RIEEDKPYD-SEKGVTDS--------YPRSRSYAV 145

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127240|ref|XP_002320022.1| predicted protein [Populus trichocarpa] gi|222860795|gb|EEE98337.1| predicted protein [Populus trichocarpa]

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/170 (42%), Positives = 100/170 (58%), Gaps = 22/170 (12%)

Query: 2   MKSK-HSHNRFVRFVMLPIRALGKARDFYVRSMINCAEGRTYGQPM---GGTLP----KS 53
           MK+K H+ ++F+R + +P+R L KARD YV+SM +C+ G  YG  +    G  P      
Sbjct: 1   MKTKAHNQSKFMRVITIPLRVLCKARDVYVKSMTDCSMGMRYGPSIVSRAGQHPPLPRSF 60

Query: 54  FSARSALSSESDDYGELVRAASVRSMGHLNEIDMLLKQHMQMRSSSQQLPQQQLGSNGKA 113
             + S    + +DY ELVRAAS RS+GH NEI+M ++   Q +SS        + +  K 
Sbjct: 61  SVSSSRSDHDGEDYRELVRAASARSLGHSNEIEMYMQLLRQQQSS--------MMTGSKK 112

Query: 114 RFPKSCSVGMAGFMGRIEEEKPGDLGEDGSVHTKTKSSDSVYPRSRSVAV 163
             PKSCSVGM GFMG+I+EEKP  + E G+V  K +    + PRS S AV
Sbjct: 113 VLPKSCSVGM-GFMGKIDEEKPC-VFEAGAVDVKPQ----LGPRSSSCAV 156

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18406291|ref|NP_564733.1| uncharacterized protein [Arabidopsis thaliana] gi|12321051|gb|AAG50647.1|AC082643_11 hypothetical protein [Arabidopsis thaliana] gi|89111882|gb|ABD60713.1| At1g58420 [Arabidopsis thaliana] gi|332195426|gb|AEE33547.1| uncharacterized protein [Arabidopsis thaliana] gi|343455557|gb|AEM36343.1| At1g58420 [Arabidopsis thaliana]

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 95/180 (52%), Gaps = 21/180 (11%)

Query: 1   MMKSKHSHNRFVRFVMLPIRALGKARDFYVRSMINCAEGRTYGQPMGGT---LPKSFSAR 57
           M K     NRF+R V +P++ L KARD Y+RS+  CA    Y   +       P+S S  
Sbjct: 1   MGKRGQKQNRFLRIVTMPLKVLCKARDLYMRSITGCAARTHYSSAVDAASVPFPRSRSTS 60

Query: 58  SALSSE------------SDDYGELVRAASVRSMGHLNEIDMLLKQHMQMRSSSQQLPQQ 105
           SA SS              DDY EL+RAASVRS+GH NEIDM+++Q  Q +   Q+    
Sbjct: 61  SAFSSSASSRRRSSDFTFDDDYSELLRAASVRSLGHKNEIDMIIQQQQQQQQQRQENRVA 120

Query: 106 QLGSNGKARFPKSCSVGMAGFMGRIEEEKPGDLGEDGSVHTKTKSSDSVYPRSRSVAVAF 165
                 K   PKS SVGM   M RI+EE      E+GSV  + K SD +YPRSRS AV  
Sbjct: 121 MGAVTVKGGLPKSSSVGMT--MARIDEEDE----EEGSVKNQKKGSDFLYPRSRSHAVTI 174

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554016|ref|XP_003545346.1| PREDICTED: uncharacterized protein LOC100803346 [Glycine max]

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 95/173 (54%), Gaps = 31/173 (17%)

Query: 1   MMKSKHSHNRFVRFVMLPIRALGKARDFYVRSMINCAEGRTY---GQPM--GGTLPKSFS 55
           M   K S N+ VR +  PIRALGKARD YVRS+ NC +  +Y   G P    G   +S S
Sbjct: 1   MRCKKQSQNKLVRIMASPIRALGKARDMYVRSITNCGQHVSYYGGGDPTEGAGRFSRSHS 60

Query: 56  ARSALSSE----SDDYGELVRAASVRSMGHLNEIDMLLKQHMQMRSSSQQLPQQQLGSNG 111
             ++ ++     S+DY EL+RAAS R++ +  ++D++LKQ        QQ      G+N 
Sbjct: 61  VATSTTTRYEVVSEDYAELLRAASARTLANRIDMDLVLKQ--------QQHANSLKGNN- 111

Query: 112 KARFPKSCSVGMAGFMGRIEEEKPGDLGEDGSVHTKTKSSDSVYPRSRSVAVA 164
               PKS SVGMA    RI+E+KP D   +G V   T      YPRSRS AVA
Sbjct: 112 ---LPKSSSVGMA----RIDEDKPYD--SEGGVAFVTDP----YPRSRSYAVA 151

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388502756|gb|AFK39444.1| unknown [Lotus japonicus]

 Score = 98.6 bits (244), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 94/169 (55%), Gaps = 17/169 (10%)

Query: 1   MMKSK-HSHNRFVRFVMLPIRALGKARDFYVRSMINCAEGRTYGQPMG-----GTLPKSF 54
           MM+SK  S + F++ +  P RALG+ARD YVRS+  C +  +YG PM       +L +S 
Sbjct: 1   MMRSKGQSQSMFMKIMASPFRALGRARDAYVRSITTCGQSVSYGNPMDPAGRFSSLSRSQ 60

Query: 55  SARSALSSESDDYGELVRAASVRSMGHLNEIDMLLKQHMQMRSSSQQLPQQQLGSNGKAR 114
           S  ++ S + DDY EL+RAAS R+M    ++D++LKQ    +    +   +  G  G ++
Sbjct: 61  SVATSRSGDGDDYAELLRAASARTMVGRIDMDLILKQQQLQQQQQHRYHTE--GPKG-SK 117

Query: 115 FPKSCSVGMAGFMGRIEEEKPGDLGEDGSVHTKTKSSDSVYPRSRSVAV 163
            PKS SVGM G    I+EE P D  E G       S    YPRS+S AV
Sbjct: 118 LPKSSSVGMGG----IDEETPYDTSEGGVAFVAPDS----YPRSKSYAV 158

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	165
TAIR|locus:2037670	179	AT1G58420 "AT1G58420" [Arabido	0.951	0.877	0.387	7.8e-23
TAIR|locus:2012833	167	AT1G10140 "AT1G10140" [Arabido	0.872	0.862	0.385	1.7e-20

TAIR|locus:2037670 AT1G58420 "AT1G58420" [Arabidopsis thaliana (taxid:3702)]

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 69/178 (38%), Positives = 87/178 (48%)

Query:     1 MMKSKHSHNRFVRFVMLPIRALGKARDFYVRSMINCAEGRTYGQPMGGT---LPKXXXXX 57
             M K     NRF+R V +P++ L KARD Y+RS+  CA    Y   +       P+     
Sbjct:     1 MGKRGQKQNRFLRIVTMPLKVLCKARDLYMRSITGCAARTHYSSAVDAASVPFPRSRSTS 60

Query:    58 XXXXXXX------------DDYGELVRAASVRSMGHLNEIDMLLKQHMQMRXXXXXXXXX 105
                                DDY EL+RAASVRS+GH NEIDM+++Q  Q +         
Sbjct:    61 SAFSSSASSRRRSSDFTFDDDYSELLRAASVRSLGHKNEIDMIIQQQQQQQQQRQENRVA 120

Query:   106 XXXXNGKARFPKSCSVGMAGFMGRIEEEKPGDLGEDGSVHTKTKSSDSVYPRSRSVAV 163
                   K   PKS SVGM   M RI+EE      E+GSV  + K SD +YPRSRS AV
Sbjct:   121 MGAVTVKGGLPKSSSVGMT--MARIDEEDE----EEGSVKNQKKGSDFLYPRSRSHAV 172

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2012833 AT1G10140 "AT1G10140" [Arabidopsis thaliana (taxid:3702)]

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 67/174 (38%), Positives = 88/174 (50%)

Query:     5 KHSHNRFVRFVMLPIRALGKARDFYVRSMINCAEGRTYGQP--MGGTLPKXXXXXXXXXX 62
             K + ++F+R +  P+RALGKARDFYVRS+  CA    Y     +    P+          
Sbjct:     2 KQNQSKFLRIISTPLRALGKARDFYVRSITGCAARTQYSSSASVSAPFPRSRSSSSAAFS 61

Query:    63 XX------------DDYGELVRAASVRSMGHLNEIDMLLKQHMQMRXXXXXXXXXXXXXN 110
                           +DY ELVRAASVRS+GH NEIDML+++ +Q +              
Sbjct:    62 SSASSRRTTDFGIDEDYSELVRAASVRSLGHKNEIDMLIQEKLQQQKQQK---------- 111

Query:   111 GKARFPKSCSVGMAGFMGRIEEEKPGDLGEDGSVHTKTKS-SDSVYPRSRSVAV 163
              +   PKS S GMA    RIEEE+  + G       KTK  SD +YPRS+S AV
Sbjct:   112 -QGGLPKSSSAGMA----RIEEEEETEEGSVNPKVKKTKKVSDLLYPRSKSYAV 160


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.134   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      165       140   0.00091  102 3  11 22  0.41    31
                                                     30  0.46    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  556 (59 KB)
  Total size of DFA:  124 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.34u 0.16s 10.50t   Elapsed:  00:00:00
  Total cpu time:  10.34u 0.16s 10.50t   Elapsed:  00:00:00
  Start:  Fri May 10 11:06:56 2013   End:  Fri May 10 11:06:56 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00