Citrus Sinensis ID: 031142
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 165 | ||||||
| 359488873 | 520 | PREDICTED: uncharacterized protein LOC10 | 0.757 | 0.240 | 0.531 | 6e-31 | |
| 356572218 | 482 | PREDICTED: probable mitochondrial chaper | 0.672 | 0.230 | 0.580 | 7e-29 | |
| 449528419 | 343 | PREDICTED: uncharacterized protein LOC10 | 0.757 | 0.364 | 0.492 | 2e-28 | |
| 224145818 | 483 | predicted protein [Populus trichocarpa] | 0.751 | 0.256 | 0.519 | 3e-28 | |
| 225452605 | 521 | PREDICTED: ATP-dependent zinc metallopro | 0.757 | 0.239 | 0.507 | 6e-28 | |
| 255552796 | 523 | ATP binding protein, putative [Ricinus c | 0.757 | 0.239 | 0.484 | 9e-28 | |
| 224076142 | 483 | predicted protein [Populus trichocarpa] | 0.757 | 0.258 | 0.531 | 2e-27 | |
| 449532958 | 311 | PREDICTED: uncharacterized protein LOC10 | 0.757 | 0.401 | 0.484 | 2e-27 | |
| 359488753 | 528 | PREDICTED: ATP-dependent zinc metallopro | 0.751 | 0.234 | 0.503 | 3e-27 | |
| 225452601 | 526 | PREDICTED: uncharacterized protein LOC10 | 0.757 | 0.237 | 0.484 | 4e-27 |
| >gi|359488873|ref|XP_002275941.2| PREDICTED: uncharacterized protein LOC100252565 [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 93/128 (72%), Gaps = 3/128 (2%)
Query: 37 KILSFLCSHLDISLT--TGERLNHSEVFSAIQNYLSIKASKHAARFKADVVEDSQSLVLS 94
K++SF+ ++ I+ + +R SE + AI+NYLS+ AS A R KADV++DSQSLVLS
Sbjct: 43 KLVSFVYPYIQITFQEFSEDRFKRSEAYVAIENYLSVNASTRAKRLKADVIKDSQSLVLS 102
Query: 95 MEDKEEVTDEFERVNVWWELGKNISRREFQFSIYPAAEEKRYYKLTFHKRDRELIPGSYV 154
M+D+EEVTDEF+ V +WW KN + + FS YPAA+EKR+YKLTFHK RE+ GSY+
Sbjct: 103 MDDREEVTDEFKGVKLWWASHKNPPKTQ-TFSFYPAADEKRFYKLTFHKNHREMFVGSYL 161
Query: 155 NHVLDGGR 162
NHV+ G+
Sbjct: 162 NHVMKEGK 169
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356572218|ref|XP_003554267.1| PREDICTED: probable mitochondrial chaperone BCS1-B-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449528419|ref|XP_004171202.1| PREDICTED: uncharacterized protein LOC101232757, partial [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|224145818|ref|XP_002325775.1| predicted protein [Populus trichocarpa] gi|222862650|gb|EEF00157.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225452605|ref|XP_002275965.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255552796|ref|XP_002517441.1| ATP binding protein, putative [Ricinus communis] gi|223543452|gb|EEF44983.1| ATP binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224076142|ref|XP_002304895.1| predicted protein [Populus trichocarpa] gi|222847859|gb|EEE85406.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|449532958|ref|XP_004173444.1| PREDICTED: uncharacterized protein LOC101232752, partial [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|359488753|ref|XP_002275823.2| PREDICTED: ATP-dependent zinc metalloprotease FtsH-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225452601|ref|XP_002281222.1| PREDICTED: uncharacterized protein LOC100257701 [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 165 | ||||||
| TAIR|locus:2178067 | 514 | AATP1 "AAA-ATPase 1" [Arabidop | 0.775 | 0.249 | 0.412 | 1.1e-24 | |
| TAIR|locus:2095512 | 500 | AT3G28580 [Arabidopsis thalian | 0.666 | 0.22 | 0.486 | 2e-24 | |
| TAIR|locus:2098658 | 530 | AT3G28510 [Arabidopsis thalian | 0.757 | 0.235 | 0.367 | 5.6e-18 | |
| TAIR|locus:2095467 | 257 | AT3G28560 "AT3G28560" [Arabido | 0.957 | 0.614 | 0.316 | 1.6e-17 | |
| TAIR|locus:2098648 | 510 | AT3G28540 [Arabidopsis thalian | 0.896 | 0.290 | 0.325 | 5.2e-14 | |
| TAIR|locus:2095532 | 477 | AT3G28600 [Arabidopsis thalian | 0.696 | 0.241 | 0.325 | 3.4e-13 | |
| TAIR|locus:2095537 | 474 | AT3G28610 [Arabidopsis thalian | 0.666 | 0.232 | 0.328 | 2.5e-12 | |
| TAIR|locus:2098638 | 478 | AT3G28520 [Arabidopsis thalian | 0.636 | 0.219 | 0.378 | 3.2e-12 | |
| TAIR|locus:2178057 | 470 | AT5G40000 [Arabidopsis thalian | 0.630 | 0.221 | 0.322 | 1.4e-11 | |
| TAIR|locus:505006520 | 506 | AT4G25835 [Arabidopsis thalian | 0.715 | 0.233 | 0.306 | 3.2e-10 |
| TAIR|locus:2178067 AATP1 "AAA-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 287 (106.1 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 54/131 (41%), Positives = 85/131 (64%)
Query: 34 LQPKILSFLCSHLDISLT--TGERLNHSEVFSAIQNYLSIKASKHAARFKADVVEDSQSL 91
L ++ F+ ++ I+ +GER S+V+ AIQ+YLS +S A + A+ ++ ++S+
Sbjct: 40 LAQSLIGFIYPYIQITFHEYSGERFKRSDVYDAIQSYLSKDSSSRAKKLTANTIKGNKSI 99
Query: 92 VLSMEDKEEVTDEFERVNVWWELGKNISRREFQFSIYPAAEEKRYYKLTFHKRDRELIPG 151
+LSM+D EE+TDEF+ V VWW+ K+ S S YP A+E R+Y L FH+RDRE+I
Sbjct: 100 ILSMDDHEEITDEFQGVKVWWQSKKHQSESR-AISFYPKADESRFYMLKFHRRDREVITK 158
Query: 152 SYVNHVLDGGR 162
Y+NHV+ G+
Sbjct: 159 KYLNHVISEGK 169
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| TAIR|locus:2095512 AT3G28580 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2098658 AT3G28510 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2095467 AT3G28560 "AT3G28560" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2098648 AT3G28540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2095532 AT3G28600 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2095537 AT3G28610 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2098638 AT3G28520 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2178057 AT5G40000 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:505006520 AT4G25835 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00020827001 | SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (518 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 165 | |||
| pfam14363 | 100 | pfam14363, AAA_assoc, Domain associated at C-termi | 2e-16 |
| >gnl|CDD|222710 pfam14363, AAA_assoc, Domain associated at C-terminal with AAA | Back alignment and domain information |
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Score = 69.9 bits (172), Expect = 2e-16
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 54 ERLNHSEVFSAIQNYLSIKASKHAARFKADVVEDSQ--SLVLSMEDKEEVTDEFERVNVW 111
+ + ++++ A + YLS K S A R KA + S+ SLVLS++D EEVTD FE V VW
Sbjct: 34 DGFSRNQLYDAAEAYLSTKISPSARRLKASKAKKSKNSSLVLSLDDGEEVTDVFEGVKVW 93
Query: 112 WELGK 116
W
Sbjct: 94 WTSVV 98
|
This domain is found in association with the AAA family, pfam00004. Length = 100 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 165 | |||
| PF14363 | 98 | AAA_assoc: Domain associated at C-terminal with AA | 100.0 | |
| KOG0743 | 457 | consensus AAA+-type ATPase [Posttranslational modi | 99.98 |
| >PF14363 AAA_assoc: Domain associated at C-terminal with AAA | Back alignment and domain information |
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Probab=100.00 E-value=1.4e-33 Score=204.21 Aligned_cols=97 Identities=34% Similarity=0.461 Sum_probs=92.5
Q ss_pred hcchhhHHHHHHHhHhhHhh-ccCCceEEEEecCCCCCcchHHHHHHHHhhccccccccceeeeecCCCcceEEecCCCc
Q 031142 21 YWNLSSCFEWNALLQPKILS-FLCSHLDISLTTGERLNHSEVFSAIQNYLSIKASKHAARFKADVVEDSQSLVLSMEDKE 99 (165)
Q Consensus 21 ~~~~~~~~~~i~~~~~~l~~-~~s~~~ti~I~e~~~~~~N~ly~Aa~~YLstk~s~~a~rL~~~~~~~~~~~~lsld~~e 99 (165)
++|.+ |++++.++++++++ +++||+||+|+|.+|+++||+|+|||+||+++++++++||++++++++++++|+|++||
T Consensus 1 ~~P~~-lr~~~~~~~~~~~~~~~s~~~ti~I~E~~g~~~N~ly~a~~~YL~s~~s~~a~rL~~~~~~~~~~~~l~l~~~e 79 (98)
T PF14363_consen 1 LLPHE-LRSYLRSLLRRLFSSRFSPYLTIVIPEFDGLSRNELYDAAQAYLSSKISPSARRLKASKSKNSKNLVLSLDDGE 79 (98)
T ss_pred CCCHH-HHHHHHHHHHHHHhccCCCcEEEEEEeCCCccccHHHHHHHHHHhhccCcccceeeecccCCCCceEEecCCCC
Confidence 46887 99999999988776 99999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEeccCCeEEEEEEeeec
Q 031142 100 EVTDEFERVNVWWELGKNI 118 (165)
Q Consensus 100 ~V~D~F~Gv~v~W~~~~~~ 118 (165)
+|+|+|+||+|||++++++
T Consensus 80 ~V~D~F~Gv~v~W~~~~~e 98 (98)
T PF14363_consen 80 EVVDVFEGVKVWWSSVCTE 98 (98)
T ss_pred EEEEEECCEEEEEEEEccC
Confidence 9999999999999999864
|
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| >KOG0743 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 165 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
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Score = 38.3 bits (88), Expect = 8e-04
Identities = 22/153 (14%), Positives = 56/153 (36%), Gaps = 30/153 (19%)
Query: 13 RLISRKQAYWNLSSCFEWNALLQPKILSFLCSHLDISLTTGERLNHSEVFSAIQNYLS-- 70
++ Y N+ F+ + L+ P + + SH+ L E +F + +L
Sbjct: 448 SIVDH---Y-NIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMV--FLDFR 501
Query: 71 -----IKASKHAARFKADVVEDSQSLVLSMEDKEEVTD---EFER-----VNVWWELGKN 117
I+ A ++ Q L K + D ++ER ++ ++ +N
Sbjct: 502 FLEQKIRHDSTAWNASGSILNTLQQLKFY---KPYICDNDPKYERLVNAILDFLPKIEEN 558
Query: 118 ISRREF----QFSIYPAAEEKRYYKLTFHKRDR 146
+ ++ + ++ E++ ++ + R
Sbjct: 559 LICSKYTDLLRIALMA--EDEAIFEEAHKQVQR 589
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00