Citrus Sinensis ID: 031154

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-----
Protein Sequence
MESTDLSGSLRDGDFEEADVWEVLKERKDSNYSKVVIEAPDLSFERNLNLTSAAAVMIPIRTSSNNNYRDKGNDAVLKQLQSAPMKIPDWSKIGKKKSKKKALEDDSDDGDSYDCKVPPHEYIAQRLAKSQVSSFSVFEGVGRTLKGRDLSKVRDAVLTKTGFLE
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccHHHHHHHHHHcccccccEEEcccccccccccHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
mestdlsgslrdgdfeEADVWEVLKerkdsnyskvvieapdlsfernlnltsaAAVMipirtssnnnyrdkgNDAVLKQLqsapmkipdwskigkkkskkkaleddsddgdsydckvppheyIAQRLaksqvssfsvfegvgrtlkgrdlskVRDAVLTKTGFLE
Flexible Loop (DISEMBL)
mestdlsgslrdgdfeeADVWEVlkerkdsnyskvvieapdlsfernLNLTSaaavmipirtssnnnyrdkGNDAVLKQlqsapmkipdwskigkkkskkkaleddsddgdsydCKVPPHEYIAQrlaksqvssfSVFEGvgrtlkgrdlskvrdavltktgfle
Low Complexity Region (SEG)
MESTDLSGSLRDGDFEEADVWEVLKERKDSNYSKVVIEAPDLSFERNLNLTSAAAVMIPIRTSSNNNYRDKGNDAVLKQLQSAPMKIPdwskigkkkskkkaleddsddgdsydCKVPPHEYIAQRLAKSQVSSFSVFEGVGRTLKGRDLSKVRDAVLTKTGFLE
Disordered region (IsUnstruct)
******************DVWEVLKER**SNYSKVVIEAPDLSFERNLNLTSAAAVMIPI************************************************************EYIAQRLAKSQVSSFSVFEGVGRTLKGR*****************
Disordered Region (DISOPRED)
************GDFEEADVWEVLK*************************************************************IPDWSKIG***********DSDDGDSYDCKVPPHEYIA******************RTLKGRDLSKVRDAVLTKTGFL*
Disordered Region (DISEMBL)
**********RDGDFEEADVWEVLKERKDSNYSKVVIEAPDLSFERNLNLTSAAAVMIPIRTSSNNNYRDKGNDAVLKQLQSAPMKIPDWSKI*******************YDCKVPPHEYIAQRLAKSQVSSFSVFEGVGRTLKGRDLSKVRDAVLTKTGFLE
Disordered Region (DISPRO)
***************EEADVWEVLKE****************************************************************************************CKVPPHEYIAQRLAKSQVSSFSVFEGVGRTLKGRDLSKVRDAVLTKTGFLE
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MESTDLSGSLRDGDFEEADVWEVLKERKDSNYSKVVIEAPDLSFERNLNLTSAAAVMIPIRTSSNNNYRDKGNDAVLKQLQSAPMKIPDWSKIGKKKSKKKALEDDSDDGDSYDCKVPPHEYIAQRLAKSQVSSFSVFEGVGRTLKGRDLSKVRDAVLTKTGFLE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	165
297737444	226	unnamed protein product [Vitis vinifera]	0.872	0.637	0.496	2e-31
356527058	212	PREDICTED: uncharacterized protein LOC10	0.933	0.726	0.466	3e-30
356553068	190	PREDICTED: uncharacterized protein LOC10	0.927	0.805	0.465	7e-29
255583627	204	conserved hypothetical protein [Ricinus	0.927	0.75	0.5	7e-29
224078600	193	predicted protein [Populus trichocarpa]	0.921	0.787	0.457	1e-28
255637290	212	unknown [Glycine max]	0.933	0.726	0.456	2e-28
359483434	190	PREDICTED: uncharacterized protein LOC10	0.921	0.8	0.477	3e-28
388494802	197	unknown [Lotus japonicus]	0.945	0.791	0.439	4e-28
358248034	195	uncharacterized protein LOC100796494 [Gl	0.951	0.805	0.440	1e-27
357459675	200	hypothetical protein MTR_3g052330 [Medic	0.957	0.79	0.455	1e-27

>gi|297737444|emb|CBI26645.3| unnamed protein product [Vitis vinifera]

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/163 (49%), Positives = 114/163 (69%), Gaps = 19/163 (11%)

Query: 9   SLRDGDFEEADVWEVLKERKDSNYSKVVIEAPDLSFERNLNLTSAAAVMIPIRTSSNNNY 68
           S+R+GDF+E DVW+VL +R+D  Y+ VV  + + S        SAA ++  +  +SN  +
Sbjct: 77  SMRNGDFQEGDVWDVLNKRED--YNSVVGSSMESSHFSPRRPPSAARMIGRVHGNSNPIH 134

Query: 69  RDKGNDAVLKQLQSAPMKIPDWSKIGKKKSKKKA------LEDDSDDGDSYDCKVPPHEY 122
             +    V++Q  SAP+KIPDWSKI  + SKK +      L+++ D+GD     +PPHE+
Sbjct: 135 EPR----VVQQ--SAPVKIPDWSKIYGENSKKASSNNASWLDNNDDEGD-----LPPHEW 183

Query: 123 IAQRLAKSQVSSFSVFEGVGRTLKGRDLSKVRDAVLTKTGFLE 165
           +A++ A+SQ+SSFSVFEGVGRTLKGRDLS+VR+AVLTKTGFLE
Sbjct: 184 LAKKYARSQISSFSVFEGVGRTLKGRDLSRVRNAVLTKTGFLE 226

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527058|ref|XP_003532131.1| PREDICTED: uncharacterized protein LOC100788195 isoform 1 [Glycine max] gi|356527060|ref|XP_003532132.1| PREDICTED: uncharacterized protein LOC100788195 isoform 2 [Glycine max]

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/195 (46%), Positives = 113/195 (57%), Gaps = 41/195 (21%)

Query: 10  LRDGDFEEADVWEVLKERKDSNYSKV--VIEAPDLSFERNLNLTSAAAVMIPIRTSSNNN 67
           LRDGDFEE +VW V KE+ D N S V    E    S +       +AA MIP RTSS N+
Sbjct: 18  LRDGDFEEEEVWAVFKEKPDYNISGVHKTREKGSFSPQAVPRTLPSAARMIP-RTSSGNS 76

Query: 68  YRDKGNDAVLKQLQSAPMKIPDWSKIGKKKSKKKALE---------DD------SDDGDS 112
                ++  + Q QSAP+ IPDWS+I + K  K   +         DD      +D+GD 
Sbjct: 77  SASSSHETKVLQ-QSAPLNIPDWSQIYRNKPNKTTPKSVSRFGEDYDDFYHHSVNDEGDG 135

Query: 113 ----------------------YDCKVPPHEYIAQRLAKSQVSSFSVFEGVGRTLKGRDL 150
                                 YD K+PPHE+IA+RLA+SQ+SSFSVFEGVGRTLKGRDL
Sbjct: 136 DGVGVVNYGGGYSDDEEEEENEYDTKLPPHEFIARRLARSQISSFSVFEGVGRTLKGRDL 195

Query: 151 SKVRDAVLTKTGFLE 165
           S+VR+AVL+KTGFLE
Sbjct: 196 SEVRNAVLSKTGFLE 210

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356553068|ref|XP_003544880.1| PREDICTED: uncharacterized protein LOC100790453 [Glycine max]

 Score =  132 bits (331), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 82/176 (46%), Positives = 110/176 (62%), Gaps = 23/176 (13%)

Query: 9   SLRDGDFEEADVWEVLKERKDSNYSKVVIEA---PDLSFERNLNLTSAAAVMIPIRTSSN 65
           SLRDGDF+E +VW+V K R  S+Y    +      D S    +    ++A MIP R+S++
Sbjct: 17  SLRDGDFDEEEVWDVFKNRS-SDYGTSGVSKFKDKDQSSSVPVPARPSSARMIP-RSSNS 74

Query: 66  NNYRDKGNDAVLKQLQSAPMKIPDWSKIGKKKSKKKAL----------------EDDSDD 109
           ++      D VL+Q  SAP+ IPDWSKI + K  K +                 ++D ++
Sbjct: 75  SSASSSNEDTVLQQ--SAPVNIPDWSKIYRTKLPKNSANSRFDGDGVANYGGGSDEDGEE 132

Query: 110 GDSYDCKVPPHEYIAQRLAKSQVSSFSVFEGVGRTLKGRDLSKVRDAVLTKTGFLE 165
            D  D K+PPHE+IA+RL +SQ+SSFSV EG GRTLKGRDLSKVR+AVL+KTGFLE
Sbjct: 133 NDESDSKLPPHEFIARRLERSQISSFSVLEGAGRTLKGRDLSKVRNAVLSKTGFLE 188

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255583627|ref|XP_002532569.1| conserved hypothetical protein [Ricinus communis] gi|223527724|gb|EEF29830.1| conserved hypothetical protein [Ricinus communis]

 Score =  131 bits (330), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/190 (50%), Positives = 123/190 (64%), Gaps = 37/190 (19%)

Query: 9   SLRDGDFEEADVWEVLKERKDSNYSKV--VIEAPDLSFERNLNLTSAAAVMIPIRTSSNN 66
           SLRDGDFEE DVW+VL+++KDSN SK+   IE+  +S  RNL  +S+AA MIP  T+S +
Sbjct: 17  SLRDGDFEEEDVWDVLRDKKDSN-SKIGNSIES-SISVPRNL--SSSAARMIPRATTSGS 72

Query: 67  NYRDKG--NDAVLKQLQSAPMKIPDWSKIGKKKSKKKALED------------------- 105
           +       + A + + QSAP+ IPDWSK+ KK SKK + +                    
Sbjct: 73  SSSSNNSSHGAQIVKQQSAPVNIPDWSKVCKKTSKKSSKKASDWRVTDDDDDDEDDDYHR 132

Query: 106 -----DSDDGDSY-----DCKVPPHEYIAQRLAKSQVSSFSVFEGVGRTLKGRDLSKVRD 155
                D+DD D Y     + ++PPHE I++RLA+SQ+SSFSVFEGVGR LKGRDLSKVR+
Sbjct: 133 AVKVVDTDDEDEYADGDNNYQLPPHELISRRLARSQISSFSVFEGVGRKLKGRDLSKVRN 192

Query: 156 AVLTKTGFLE 165
           AVL KTGFLE
Sbjct: 193 AVLIKTGFLE 202

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078600|ref|XP_002305570.1| predicted protein [Populus trichocarpa] gi|222848534|gb|EEE86081.1| predicted protein [Populus trichocarpa]

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/177 (45%), Positives = 103/177 (58%), Gaps = 25/177 (14%)

Query: 9   SLRDGDFEEADVWEVLKERKDSNYSKVVIEAPDLSFERNLNLTSAAAVMIPIRTSSNNNY 68
           S+RD DFEE DVW V+KE  DS+ +     +   SF    +L S A  MIP   ++  N+
Sbjct: 22  SMRDEDFEEEDVWSVVKEMGDSSSNSKYPSS-GPSFSSAWHLPSTAPRMIPATKTTATNH 80

Query: 69  RDKGNDAVLKQLQSAPMKIPDWSKI-GKKKSKKKALEDDSDDGDSYDCK----------- 116
             K      +Q  SAP+ IPDWSKI GK      A   D  +G +Y              
Sbjct: 81  GGK----AAQQQSSAPVNIPDWSKIYGKDSRDIMASWVDDHNGIAYGDGDDHVNDDVDDC 136

Query: 117 --------VPPHEYIAQRLAKSQVSSFSVFEGVGRTLKGRDLSKVRDAVLTKTGFLE 165
                   VPPHE++A++LA+SQ+SSFSV EG+GRTLKGRDLSKVR+A+LTKTGFLE
Sbjct: 137 DEDGDDGIVPPHEWLARKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE 193

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637290|gb|ACU18975.1| unknown [Glycine max]

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/195 (45%), Positives = 111/195 (56%), Gaps = 41/195 (21%)

Query: 10  LRDGDFEEADVWEVLKERKDSNYSKV--VIEAPDLSFERNLNLTSAAAVMIPIRTSSNNN 67
           LRDGDFEE +VW V KE+ D N S V    E    S +       +AA MIP RTSS N+
Sbjct: 18  LRDGDFEEEEVWAVFKEKPDYNISGVHKTREKGSFSPQAVPRTLPSAARMIP-RTSSGNS 76

Query: 68  YRDKGNDAVLKQLQSAPMKIPDWSKIGKKKSKKKALE---------DD------SDDGDS 112
                ++  + Q QSAP+ IPDWS+I + K  K   +         DD      +D+GD 
Sbjct: 77  SASSSHETKVFQ-QSAPLNIPDWSQIYRNKPNKTTPKSVSRFGEDYDDFYHHSVNDEGDG 135

Query: 113 ----------------------YDCKVPPHEYIAQRLAKSQVSSFSVFEGVGRTLKGRDL 150
                                 YD K+P HE+IA+RLA+SQ+SSFSVFEGVGRTLKGRD 
Sbjct: 136 DGVGVVNYGGGYSDDEEEEENEYDTKLPFHEFIARRLARSQISSFSVFEGVGRTLKGRDF 195

Query: 151 SKVRDAVLTKTGFLE 165
           S+VR+AVL+KTGFLE
Sbjct: 196 SEVRNAVLSKTGFLE 210

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483434|ref|XP_003632958.1| PREDICTED: uncharacterized protein LOC100854465 [Vitis vinifera]

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/176 (47%), Positives = 112/176 (63%), Gaps = 24/176 (13%)

Query: 10  LRDGDFEEADVWEVLKERKDSNYSKVVIEAPDLSFERNLNLTSAAAVM--IPIRTSSNNN 67
           +RD DF+E DVW V+K+R+DS  S ++ ++ D S   + + +S+A  +   P      NN
Sbjct: 19  MRDEDFDEEDVWAVVKDREDS--SPIMRKSKDYSSGSSSSSSSSAWRLPTAPRGIRRGNN 76

Query: 68  YRDKGNDAVLKQLQSAPMKIPDWSKIGKKKSKKK----ALEDDSDDGDSYD-CKV----- 117
                ++A L Q  SAPM IPDWSKI +K S+       +ED +D G+++  C V     
Sbjct: 77  --TPSHEAKLVQHSSAPMNIPDWSKIYRKNSRAMPWVDGVEDVNDAGNTHQICVVDDDDD 134

Query: 118 --------PPHEYIAQRLAKSQVSSFSVFEGVGRTLKGRDLSKVRDAVLTKTGFLE 165
                   PPHE+IA++LA SQ+SSFSV EGVGRTLKGRDLSKVR+AVLTKTGFLE
Sbjct: 135 DDGDDDIVPPHEWIARKLASSQISSFSVCEGVGRTLKGRDLSKVRNAVLTKTGFLE 190

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388494802|gb|AFK35467.1| unknown [Lotus japonicus]

 Score =  129 bits (325), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/182 (43%), Positives = 107/182 (58%), Gaps = 26/182 (14%)

Query: 9   SLRDGDFEEADVWEVLKERKDSNYSKVVIEAPDLSFERNLNLTSAAAVMIPIRTSSNNNY 68
           SLRDGDFEE ++W+VL+ + DS+   +  +  + S          A+ MIP R S+ ++ 
Sbjct: 17  SLRDGDFEEEEIWDVLQNKPDSSSGVLKPKEKEPSPLPAPRPIPTASRMIPRRISNCSSN 76

Query: 69  RDKGNDAVLKQLQSAPMKIPDWSKIGKK---KSKKKALEDDSDDGDSYDC---------- 115
               +  V    QSAP+ IPDWSK+ +     ++KKA    S   DSYD           
Sbjct: 77  SASSSHEVKILQQSAPVNIPDWSKVHRNDDDNNQKKAFRSGSR-FDSYDAHHSVVDDEVD 135

Query: 116 ------------KVPPHEYIAQRLAKSQVSSFSVFEGVGRTLKGRDLSKVRDAVLTKTGF 163
                       K+PPHE+IA+RLA+S +SSFSV EGVGRTLKGRDLSK+R+AVLT+TGF
Sbjct: 136 GGDSDEDDEYDSKLPPHEFIAKRLARSHISSFSVLEGVGRTLKGRDLSKLRNAVLTRTGF 195

Query: 164 LE 165
           LE
Sbjct: 196 LE 197

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248034|ref|NP_001240052.1| uncharacterized protein LOC100796494 [Glycine max] gi|255645861|gb|ACU23421.1| unknown [Glycine max]

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/177 (44%), Positives = 110/177 (62%), Gaps = 20/177 (11%)

Query: 9   SLRDGDFEEADVWEVLKERKD-SNYSKVVIEAPDLSFERNLNLTSAAAVMIPIRTSSNNN 67
           SLRDG+F+E +VW+V K R D  + S  V +  D     ++    ++A MIP  ++S+NN
Sbjct: 17  SLRDGEFDEEEVWDVFKNRSDYGSSSSGVRKFKDKGKSSSVPARPSSARMIPRSSNSSNN 76

Query: 68  YRDKGNDAVLKQLQSAPMKIPDWSKIGKKKSKKKAL-------------------EDDSD 108
                ++      QSAP+ IPDWSKI + K+ K ++                   ++D +
Sbjct: 77  SSASSSNEAKVLQQSAPVNIPDWSKIYRTKTPKNSVSRFDDDYDGDGAANYGGDSDEDGE 136

Query: 109 DGDSYDCKVPPHEYIAQRLAKSQVSSFSVFEGVGRTLKGRDLSKVRDAVLTKTGFLE 165
           + D  D K+PPHE+IA+RLA+S++SSFSV EG GRTLKGRDLSKVR+ VL+KTGFLE
Sbjct: 137 ENDESDSKLPPHEFIARRLARSRISSFSVLEGAGRTLKGRDLSKVRNDVLSKTGFLE 193

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357459675|ref|XP_003600118.1| hypothetical protein MTR_3g052330 [Medicago truncatula] gi|355489166|gb|AES70369.1| hypothetical protein MTR_3g052330 [Medicago truncatula] gi|388510872|gb|AFK43502.1| unknown [Medicago truncatula]

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/191 (45%), Positives = 116/191 (60%), Gaps = 33/191 (17%)

Query: 4   TDLSGSLRDGDFEEADVWEVLKERKDSNYSKVVIEAPDLSFERNLNLTSAAAVMIPI-RT 62
           ++L  +LRD DFEE ++W+V+KER   NY   V +  +     +L + +AA  MIPI RT
Sbjct: 12  SELWRTLRDEDFEEEEIWDVVKER--PNYISEVHKPKEKKELSSLPIPTAAR-MIPIPRT 68

Query: 63  SSNNNYRDKGNDAVLKQLQSAPMKIPDWSKI------GKKKSKKKAL---EDDSDDGD-- 111
           SS ++  +  ++ +  Q QSAP+ IPDWSKI       + KS KK     E    +GD  
Sbjct: 69  SSGSSSANLSHETMAFQ-QSAPVNIPDWSKIYGNNNNKQNKSTKKVSRYNEYGYYEGDDE 127

Query: 112 -----------------SYDCKVPPHEYIAQRLAKSQVSSFSVFEGVGRTLKGRDLSKVR 154
                             Y  +VPPHE I++RLA+SQ+SSFSVFEGVGRTLKGRDLSK+R
Sbjct: 128 VVYHGGEDGEEDDDDDDEYSTRVPPHEIISRRLARSQISSFSVFEGVGRTLKGRDLSKMR 187

Query: 155 DAVLTKTGFLE 165
           ++VL KTGFLE
Sbjct: 188 NSVLIKTGFLE 198

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	165
TAIR|locus:2120608	157	AT4G21970 "AT4G21970" [Arabido	0.824	0.866	0.403	8e-21
TAIR|locus:2125796	168	AT4G04630 "AT4G04630" [Arabido	0.842	0.827	0.387	4.4e-20
TAIR|locus:2116457	144	AT4G26950 "AT4G26950" [Arabido	0.284	0.326	0.653	1.4e-15
TAIR|locus:2096900	148	AT3G45210 "AT3G45210" [Arabido	0.278	0.310	0.66	5.6e-13
TAIR|locus:2027392	201	AT1G11700 "AT1G11700" [Arabido	0.721	0.592	0.341	1e-11
TAIR|locus:2086375	243	AT3G15040 "AT3G15040" [Arabido	0.296	0.201	0.591	4.7e-11
TAIR|locus:2175846	163	AT5G60680 "AT5G60680" [Arabido	0.260	0.263	0.638	1.5e-10
TAIR|locus:2057542	162	AT2G28400 "AT2G28400" [Arabido	0.260	0.265	0.553	1.6e-10
TAIR|locus:2141687	183	AT4G21930 "AT4G21930" [Arabido	0.278	0.251	0.638	4.1e-10
TAIR|locus:2040799	136	AT2G34340 "AT2G34340" [Arabido	0.290	0.352	0.591	1.8e-09

TAIR|locus:2120608 AT4G21970 "AT4G21970" [Arabidopsis thaliana (taxid:3702)]

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 63/156 (40%), Positives = 86/156 (55%)

Query:    14 DFEEADVWEVLKERKDSNYSKVVIEAPDLSFERNLNLTSAAAVMIPIRTSSNNNYRDKGN 73
             +F+E +VW VL+E +         + P++   ++ NL SA++       SS+  Y  KGN
Sbjct:     6 EFQEEEVWSVLRESET--------QGPEMKMSKSNNLFSASS-------SSSARYIPKGN 50

Query:    74 DAV--LKQLQSAPMKIP--XXXXXXXXXXXXXXXXXXXXXXXXXXCKVPPHEYIAQRLAK 129
             +     KQ  SAPM IP                              VPPHE +A+RLA+
Sbjct:    51 EVSGGAKQ-SSAPMNIPDWSKVYGYSKKNTSSHLHSWAIDDDDEGSMVPPHELVAKRLAR 109

Query:   130 SQVSSFSVFEGVGRTLKGRDLSKVRDAVLTKTGFLE 165
             +Q+SSFS+ EG+GRTLKGRDLSK R+AVLT+TGFLE
Sbjct:   110 TQISSFSMCEGIGRTLKGRDLSKTRNAVLTRTGFLE 145

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2125796 AT4G04630 "AT4G04630" [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 62/160 (38%), Positives = 90/160 (56%)

Query:    12 DGDFEEADVWEVLKERKDSNYSKVVIEAPDLSFERNLNLTSAAAVMIPIRTSSNNNYRDK 71
             D +F+E DVW VL+E + S+        P++   ++ + +S+++      +SS  N R  
Sbjct:    24 DEEFQEEDVWSVLREGETSS--------PEMKIPKS-HFSSSSS-----SSSSPWNIRRS 69

Query:    72 GNDAVLKQLQSAPMKIPXXXXXXXXXXXXXXXXXXXXXXXXXX------CKVPPHEYIAQ 125
                + +KQ  SAPM +P                                C VPPHE++A+
Sbjct:    70 KEVSGVKQ-SSAPMNVPDWSKVYGDSKSNRRSSHLHSHAADDDDEDDDGCMVPPHEWVAR 128

Query:   126 RLAKSQVSSFSVFEGVGRTLKGRDLSKVRDAVLTKTGFLE 165
             +LA++Q+SSFS+ EGVGRTLKGRDLSKVR+AVL+KTGFLE
Sbjct:   129 KLARTQISSFSMCEGVGRTLKGRDLSKVRNAVLSKTGFLE 168

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2116457 AT4G26950 "AT4G26950" [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
 Identities = 32/49 (65%), Positives = 36/49 (73%)

Query:   117 VPPHEYIAQRLAKSQVSSFSVFEGVGRTLKGRDLSKVRDAVLTKTGFLE 165
             V P EY  +R   S  SS SV EGVGR LKGRDLSKVR+A+L +TGFLE
Sbjct:    98 VSPEEYFLRRSRSS--SSSSVMEGVGRKLKGRDLSKVRNAILKQTGFLE 144

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2096900 AT3G45210 "AT3G45210" [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 33/50 (66%), Positives = 44/50 (88%)

Query:   116 KVPPHEYIAQRLAKSQVSSFSVFEGVGRTLKGRDLSKVRDAVLTKTGFLE 165
             K+PPHEY    LAK++++SFSV EG+GRTLKGRD+S+VR+A+L KTGFL+
Sbjct:   103 KLPPHEY----LAKTRMASFSVHEGIGRTLKGRDMSRVRNAILEKTGFLD 148

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2027392 AT1G11700 "AT1G11700" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 43/126 (34%), Positives = 61/126 (48%)

Query:    42 LSFERNLNLTSAAAVMIPIRTSSNNNYRDKGNDAVLKQL-QSAPMKIPXXXXXXXXXXXX 100
             L+FE   + +S+  ++  IR          G   V +QL  SAP+ +P            
Sbjct:    77 LAFE---DASSSPRIVHQIRGGGEGGGGGGGGGRVERQLASSAPVNVPDWSKIYRVNSVE 133

Query:   101 XXXXXXXXXXXXXXCKVPPHEYIA---QRLAKSQVSSFSVFEGVGRTLKGRDLSKVRDAV 157
                             +PPHEY+A   QR ++      SVFEGVGRTLKGR+L +VRDA+
Sbjct:   134 SIHESDEEEEEDSGMMMPPHEYLAKSQQRRSRKSGGGGSVFEGVGRTLKGRELRRVRDAI 193

Query:   158 LTKTGF 163
              ++TGF
Sbjct:   194 WSQTGF 199

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2086375 AT3G15040 "AT3G15040" [Arabidopsis thaliana (taxid:3702)]

 Score = 153 (58.9 bits), Expect = 4.7e-11, P = 4.7e-11
 Identities = 29/49 (59%), Positives = 39/49 (79%)

Query:   117 VPPHEYIAQRLAKSQVSSFSVFEGVGRTLKGRDLSKVRDAVLTKTGFLE 165
             +PPHE +A+ LA+S + S SV EG GRTLKGRDL +VR+AV  +TGF++
Sbjct:   195 LPPHEIVARSLAQSSLLSCSVLEGAGRTLKGRDLRQVRNAVFRRTGFID 243

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2175846 AT5G60680 "AT5G60680" [Arabidopsis thaliana (taxid:3702)]

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 30/47 (63%), Positives = 39/47 (82%)

Query:   117 VPPHEYIAQRLAKSQVSSFSVFEGVGRTLKGRDLSKVRDAVLTKTGF 163
             +PPHE+    LAK++++SFSV EGVGRTLKGRDLS+VR+A+  K GF
Sbjct:   119 LPPHEF----LAKTRMASFSVHEGVGRTLKGRDLSRVRNAIFEKFGF 161

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2057542 AT2G28400 "AT2G28400" [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
 Identities = 26/47 (55%), Positives = 34/47 (72%)

Query:   116 KVPPHEYIAQRLAKSQVSSFSVFEGVGRTLKGRDLSKVRDAVLTKTG 162
             +VPPHE +A R    +++SFSV EG GRTLKGRDLS+VR+ +    G
Sbjct:   117 RVPPHELLANR----RMASFSVHEGAGRTLKGRDLSRVRNTIFKIRG 159

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2141687 AT4G21930 "AT4G21930" [Arabidopsis thaliana (taxid:3702)]

 Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 30/47 (63%), Positives = 35/47 (74%)

Query:   117 VPPHEYIAQRLAKSQVSSFSVFEGVGRTLKGRDLSKVRDAVLTKTGF 163
             VPPHEY+A R       S SVF GVGRTLKGRD+ +VRDAV ++TGF
Sbjct:   136 VPPHEYVAARSRNGDGGS-SVFLGVGRTLKGRDMRRVRDAVWSQTGF 181

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2040799 AT2G34340 "AT2G34340" [Arabidopsis thaliana (taxid:3702)]

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 29/49 (59%), Positives = 37/49 (75%)

Query:   117 VPPHEYIAQRLAKSQVSSFSVFEGVGRTLKGRDLSKVRDAVLTKTGFLE 165
             +PPH  I +R+   Q++ FSV  G GRTLKGRDLS+VR++VL  TGFLE
Sbjct:    88 IPPHIMIGRRIQGGQMA-FSVCSGSGRTLKGRDLSRVRNSVLRLTGFLE 135

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009739 "response to gibberellin stimulus" evidence=IEP

GO:0009062 "fatty acid catabolic process" evidence=RCA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00027314001 SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (166 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	165
pfam04520	146	pfam04520, Senescence_reg, Senescence regulator	8e-39

>gnl|CDD|218126 pfam04520, Senescence_reg, Senescence regulator

 Score =  128 bits (324), Expect = 8e-39
 Identities = 58/156 (37%), Positives = 79/156 (50%), Gaps = 13/156 (8%)

Query: 12  DGDFEEADVWEVLKERKDSNYSKVVIEAPDLSFERNLNLTSAAAVMIPIRTSSNNNYRDK 71
           + + +E+DVW V                   +F+R L            RT        +
Sbjct: 2   ELELDESDVWWVASSVPGPLARS---SGSSPAFKRGL----RGPPTSSARTIPKIPKGGR 54

Query: 72  GNDAVLKQLQSAPMKIPDWSKIGKKKSKKKALEDDSDDGDSYD--CKVPPHEYIAQRLAK 129
                 K   SAP+ +PDWSKI + + ++   + D DD +  D    VPPHEY    LA+
Sbjct: 55  AGAGGAKAASSAPVNVPDWSKILRGRRRRSIEDSDDDDEEDGDGAMMVPPHEY----LAR 110

Query: 130 SQVSSFSVFEGVGRTLKGRDLSKVRDAVLTKTGFLE 165
            + +SFSV EGVGRTLKGRDL +VR+AVL KTGFL+
Sbjct: 111 RRAASFSVLEGVGRTLKGRDLRRVRNAVLRKTGFLD 146

This protein regulates the expression of proteins associated with leaf senescence in plants. Length = 146

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	165
PF04520	152	Senescence_reg: Senescence regulator; InterPro: IP	100.0

>PF04520 Senescence_reg: Senescence regulator; InterPro: IPR007608 This family contains several uncharacterised proteins

Probab=100.00  E-value=2.3e-49  Score=314.52  Aligned_cols=145  Identities=42%  Similarity=0.661  Sum_probs=98.9

Q ss_pred             CCCCCchhhhhhhcccccCCC-ccc--cccCCCccccc-cccccccccccccccCCCCCCCCCCCCcchhcccCCcCcCC
Q 031154           12 DGDFEEADVWEVLKERKDSNY-SKV--VIEAPDLSFER-NLNLTSAAAVMIPIRTSSNNNYRDKGNDAVLKQLQSAPMKI   87 (165)
Q Consensus        12 ~eeFdEeDVW~v~~~~~~~~~-~~~--~~~~~~~s~s~-~~~~~~sa~R~IPr~~~~~~~~~~~~~~~~~~~~~SaPVnI   87 (165)
                      .+||+|+|||.++........ +..  +....+.++.. .....++++|+||..+....    ........+ |||||||
T Consensus         2 ~~El~E~DVw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~R~~~~~~~~~~----~~~~~~~~~-~SaPV~I   76 (152)
T PF04520_consen    2 AEELDEEDVWWVDDDSDPDSNSSDSQNSSSGSSSSFSRSSSARPPSSPRMIPRSPSSGR----SSSRSRKAA-SSAPVNI   76 (152)
T ss_pred             ccccCHhhccccCCCCCcccccccccccccCCcccccccccCCCCCCCcccCCCCCCcC----CCCCCCccC-CCCcccC
Confidence            589999999998876554320 000  11111111111 01122688999998762211    112223344 8999999


Q ss_pred             CCcccccccccccc--cccCCCCCCCCCCCCCChHHHHHHHhhhccccccccccCCCCccCCcchhhhhhhhhhccCCCC
Q 031154           88 PDWSKIGKKKSKKK--ALEDDSDDGDSYDCKVPPHEYIAQRLAKSQVSSFSVFEGVGRTLKGRDLSKVRDAVLTKTGFLE  165 (165)
Q Consensus        88 Pdwski~~~~~~~~--~~~~~~dddd~~~~~vPPHe~~arr~a~~~~~sfSv~eG~GRTLKGRDL~~vRnAVl~~TGF~e  165 (165)
                      |+|+|||+......  ..++++++++++.+|||||||||||    ++++||||||+|||||||||+|||||||+||||||
T Consensus        77 P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~vPPHe~~ar~----~~~s~Sv~eG~GRTLKGRDL~rVRNAVl~~TGFle  152 (152)
T PF04520_consen   77 PDWSKILGSRRRRREEDDDDDDDEDDDGGEMVPPHELVARR----RAASFSVCEGVGRTLKGRDLRRVRNAVLRQTGFLE  152 (152)
T ss_pred             cCccccccccccccccccccccccccCCccccCcHHHHhhh----cccCcccccCCCccchhhHHHHHHHHHHhhhccCC
Confidence            99999998643321  2233344556677899999999994    56789999999999999999999999999999997

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00