Citrus Sinensis ID: 031522


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------16
MMANLYVKATPPADLNRNTEWFTYPGVWTTYILILFFAWLIVLSVFGCSPGMAWTIVNLAHFLITYHFFHWKKGTPFAEDQGIYNGLTWWEQIDNGQQLTRNRKFLTVVPVVLYLIASHTTDYQHPMLFFNTLAVFVLVVAKFPNMHKVRIFGINADK
ccccEEEEccccccccccccEEEcccHHHHHHHHHHHHHHHHHHHccccccccEEEEHHHHHHHHEEEEEEEcccccccccccccccccEEEEccccccccccEEEEEHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccEEEEEEEcccc
ccccEEEEEccccccccccHHcccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEHEEccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccHcccEEEEEEcccc
mmanlyvkatppadlnrntewftypgVWTTYILILFFAWLIVLSVfgcspgmaWTIVNLAHFLITYHFfhwkkgtpfaedqgiynglTWWEQIDngqqltrnrkfLTVVPVVLYLIAShttdyqhpmlFFNTLAVFVLVVAkfpnmhkvrifginadk
mmanlyvkatppadlnrntEWFTYPGVWTTYILILFFAWLIVLSVFGCSPGMAWTIVNLAHFLITYHFFHWKKGTPFAEDQGIYNGLTWWEQIDNGQQLTRNRKFLTVVPVVLYLIASHTTDYQHPMLFFNTLAVFVLVVAKFPNMHKVRIFGINADK
MMANLYVKATPPADLNRNTEWFTYPGVWTTYILILFFAWLIVLSVFGCSPGMAWTIVNLAHFLITYHFFHWKKGTPFAEDQGIYNGLTWWEQIDNGQQLTRNRKFLTVVPVVLYLIASHTTDYQHPMLFFNTLAVFVLVVAKFPNMHKVRIFGINADK
************ADLNRNTEWFTYPGVWTTYILILFFAWLIVLSVFGCSPGMAWTIVNLAHFLITYHFFHWKKGTPFAEDQGIYNGLTWWEQIDNGQQLTRNRKFLTVVPVVLYLIASHTTDYQHPMLFFNTLAVFVLVVAKFPNMHKVRIFGI****
********ATPPADLNRNTEWFTYPGVWTTYILILFFAWLIVLSVFGCSPGMAWTIVNLAHFLITYHFFHWKKGTPFAEDQGIYNGLTWWEQIDNGQQLTRNRKFLTVVPVVLYLIASHTTDYQHPMLFFNTLAVFVLVVAKFPNMHKVRIFGIN***
MMANLYVKATPPADLNRNTEWFTYPGVWTTYILILFFAWLIVLSVFGCSPGMAWTIVNLAHFLITYHFFHWKKGTPFAEDQGIYNGLTWWEQIDNGQQLTRNRKFLTVVPVVLYLIASHTTDYQHPMLFFNTLAVFVLVVAKFPNMHKVRIFGINADK
*MANLYVKATPPADLNRNTEWFTYPGVWTTYILILFFAWLIVLSVFGCSPGMAWTIVNLAHFLITYHFFHWKKGTPFAEDQGIYNGLTWWEQIDNGQQLTRNRKFLTVVPVVLYLIASHTTDYQHPMLFFNTLAVFVLVVAKFPNMHKVRIFGINA**
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooo
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MMANLYVKATPPADLNRNTEWFTYPGVWTTYILILFFAWLIVLSVFGCSPGMAWTIVNLAHFLITYHFFHWKKGTPFAEDQGIYNGLTWWEQIDNGQQLTRNRKFLTVVPVVLYLIASHTTDYQHPMLFFNTLAVFVLVVAKFPNMHKVRIFGINADK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query158 2.2.26 [Sep-21-2011]
Q921I0153 ORM1-like protein 1 OS=Mu yes no 0.905 0.934 0.423 8e-26
O42901186 Uncharacterized protein C yes no 0.886 0.752 0.392 8e-26
Q9CPZ6153 ORM1-like protein 3 OS=Mu no no 0.930 0.960 0.412 9e-26
Q6QI25153 ORM1-like protein 3 OS=Ra no no 0.930 0.960 0.412 1e-25
Q53FV1153 ORM1-like protein 2 OS=Ho yes no 0.905 0.934 0.416 2e-25
Q8N138153 ORM1-like protein 3 OS=Ho no no 0.930 0.960 0.405 2e-25
Q0VD15153 ORM1-like protein 3 OS=Bo yes no 0.930 0.960 0.405 2e-25
Q5R570153 ORM1-like protein 3 OS=Po yes no 0.930 0.960 0.405 3e-25
Q5XH57153 ORM1-like protein 1 OS=Xe N/A no 0.905 0.934 0.430 3e-25
Q5XJR6153 ORM1-like protein 3 OS=Da yes no 0.936 0.967 0.395 5e-25
>sp|Q921I0|ORML1_MOUSE ORM1-like protein 1 OS=Mus musculus GN=Ormdl1 PE=2 SV=1 Back     alignment and function desciption
 Score =  115 bits (289), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 61/144 (42%), Positives = 85/144 (59%), Gaps = 1/144 (0%)

Query: 13  ADLNRNTEWFTYPGVWTTYILILFFAWLIVLSVFGCSPGMAWTIVNLAHFLITYHFFHWK 72
           +++N NT      G+W TY L +    +++LS+  CS  +AWT+ N+ H L  Y F H  
Sbjct: 8   SEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFCSVPVAWTLTNIIHNLGMYVFLHAV 67

Query: 73  KGTPF-AEDQGIYNGLTWWEQIDNGQQLTRNRKFLTVVPVVLYLIASHTTDYQHPMLFFN 131
           KGTPF   DQG    LT WEQ+D G Q T +RKF T+ P++LY +AS  T Y       N
Sbjct: 68  KGTPFETPDQGRARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYDPTHFILN 127

Query: 132 TLAVFVLVVAKFPNMHKVRIFGIN 155
           T ++  +++ K P +H VRIFGIN
Sbjct: 128 TASLLSVLIPKMPQLHGVRIFGIN 151




Negative regulator of sphingolipid synthesis.
Mus musculus (taxid: 10090)
>sp|O42901|YBA9_SCHPO Uncharacterized protein C119.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC119.09c PE=2 SV=3 Back     alignment and function description
>sp|Q9CPZ6|ORML3_MOUSE ORM1-like protein 3 OS=Mus musculus GN=Ormdl3 PE=2 SV=1 Back     alignment and function description
>sp|Q6QI25|ORML3_RAT ORM1-like protein 3 OS=Rattus norvegicus GN=Ormdl3 PE=2 SV=2 Back     alignment and function description
>sp|Q53FV1|ORML2_HUMAN ORM1-like protein 2 OS=Homo sapiens GN=ORMDL2 PE=2 SV=2 Back     alignment and function description
>sp|Q8N138|ORML3_HUMAN ORM1-like protein 3 OS=Homo sapiens GN=ORMDL3 PE=1 SV=1 Back     alignment and function description
>sp|Q0VD15|ORML3_BOVIN ORM1-like protein 3 OS=Bos taurus GN=ORMDL3 PE=2 SV=1 Back     alignment and function description
>sp|Q5R570|ORML3_PONAB ORM1-like protein 3 OS=Pongo abelii GN=ORMDL3 PE=2 SV=1 Back     alignment and function description
>sp|Q5XH57|ORML1_XENLA ORM1-like protein 1 OS=Xenopus laevis GN=ormdl1 PE=2 SV=1 Back     alignment and function description
>sp|Q5XJR6|ORML3_DANRE ORM1-like protein 3 OS=Danio rerio GN=ormdl3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query158
225470956157 PREDICTED: uncharacterized protein C119. 0.987 0.993 0.935 4e-82
388498352157 unknown [Medicago truncatula] 0.993 1.0 0.910 3e-81
255564625157 ormdl, putative [Ricinus communis] gi|22 0.987 0.993 0.929 4e-81
449432032157 PREDICTED: uncharacterized protein C119. 0.993 1.0 0.910 1e-80
388502058157 unknown [Lotus japonicus] 0.993 1.0 0.904 6e-80
388520763157 unknown [Lotus japonicus] 0.993 1.0 0.898 1e-79
224130584157 predicted protein [Populus trichocarpa] 0.993 1.0 0.898 1e-79
356520260157 PREDICTED: uncharacterized protein C119. 0.993 1.0 0.891 4e-79
358248096157 uncharacterized protein LOC100813346 [Gl 0.993 1.0 0.891 4e-79
224068018157 predicted protein [Populus trichocarpa] 0.993 1.0 0.904 1e-78
>gi|225470956|ref|XP_002266406.1| PREDICTED: uncharacterized protein C119.09c isoform 1 [Vitis vinifera] gi|147833320|emb|CAN64101.1| hypothetical protein VITISV_008727 [Vitis vinifera] gi|297745501|emb|CBI40581.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  308 bits (789), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 146/156 (93%), Positives = 152/156 (97%)

Query: 2   MANLYVKATPPADLNRNTEWFTYPGVWTTYILILFFAWLIVLSVFGCSPGMAWTIVNLAH 61
           MANLYVKA PPADLNRNTEWFTYPGVWTTYILILFFAWL+VLS+FGCSPGMAWT+VNL H
Sbjct: 1   MANLYVKAEPPADLNRNTEWFTYPGVWTTYILILFFAWLLVLSIFGCSPGMAWTVVNLFH 60

Query: 62  FLITYHFFHWKKGTPFAEDQGIYNGLTWWEQIDNGQQLTRNRKFLTVVPVVLYLIASHTT 121
           FL+TYHFFHWKKGTPFAEDQGIYN LTWWEQIDNG+QLTRNRKFLTVVPVVLYLIASHTT
Sbjct: 61  FLVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTT 120

Query: 122 DYQHPMLFFNTLAVFVLVVAKFPNMHKVRIFGINAD 157
           DYQHPMLFFNTLAV VLV+AKFPNMHKVRIFGINAD
Sbjct: 121 DYQHPMLFFNTLAVIVLVIAKFPNMHKVRIFGINAD 156




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388498352|gb|AFK37242.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|255564625|ref|XP_002523307.1| ormdl, putative [Ricinus communis] gi|223537395|gb|EEF39023.1| ormdl, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449432032|ref|XP_004133804.1| PREDICTED: uncharacterized protein C119.09c-like [Cucumis sativus] gi|449477951|ref|XP_004155172.1| PREDICTED: uncharacterized protein C119.09c-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|388502058|gb|AFK39095.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|388520763|gb|AFK48443.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|224130584|ref|XP_002320877.1| predicted protein [Populus trichocarpa] gi|118481425|gb|ABK92655.1| unknown [Populus trichocarpa] gi|118489633|gb|ABK96618.1| unknown [Populus trichocarpa x Populus deltoides] gi|222861650|gb|EEE99192.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356520260|ref|XP_003528781.1| PREDICTED: uncharacterized protein C119.09c-like isoform 1 [Glycine max] gi|356520262|ref|XP_003528782.1| PREDICTED: uncharacterized protein C119.09c-like isoform 2 [Glycine max] gi|356520264|ref|XP_003528783.1| PREDICTED: uncharacterized protein C119.09c-like isoform 3 [Glycine max] Back     alignment and taxonomy information
>gi|358248096|ref|NP_001239812.1| uncharacterized protein LOC100813346 [Glycine max] gi|255633478|gb|ACU17097.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|224068018|ref|XP_002302648.1| predicted protein [Populus trichocarpa] gi|222844374|gb|EEE81921.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query158
TAIR|locus:2035352157 AT1G01230 "AT1G01230" [Arabido 0.993 1.0 0.866 7.1e-77
TAIR|locus:2165690154 AT5G42000 "AT5G42000" [Arabido 0.974 1.0 0.844 1.1e-73
MGI|MGI:1913862153 Ormdl3 "ORM1-like 3 (S. cerevi 0.924 0.954 0.414 2.2e-27
POMBASE|SPBC119.09c186 SPBC119.09c "ORMDL family prot 0.879 0.747 0.395 2.2e-27
RGD|1560577153 Ormdl3 "ORM1-like 3 (S. cerevi 0.924 0.954 0.414 3.5e-27
MGI|MGI:2181669153 Ormdl1 "ORM1-like 1 (S. cerevi 0.905 0.934 0.423 4.5e-27
UNIPROTKB|Q0VD15153 ORMDL3 "ORM1-like protein 3" [ 0.924 0.954 0.408 7.3e-27
UNIPROTKB|E2R9D6153 ORMDL3 "Uncharacterized protei 0.924 0.954 0.408 7.3e-27
UNIPROTKB|Q53FV1153 ORMDL2 "ORM1-like protein 2" [ 0.905 0.934 0.416 7.3e-27
UNIPROTKB|Q8N138153 ORMDL3 "ORM1-like protein 3" [ 0.924 0.954 0.408 7.3e-27
TAIR|locus:2035352 AT1G01230 "AT1G01230" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
 Identities = 136/157 (86%), Positives = 146/157 (92%)

Query:     2 MANLYVKATPPADLNRNTEWFTYPGVWTTYILILFFAWLIVLSVFGCSPGMAWTIVNLAH 61
             MANLYVKA PP D+NRNTEWF YPGVWTTY+LILFF WL+VLSV GCSPGMAWT+VNLAH
Sbjct:     1 MANLYVKAVPPPDMNRNTEWFMYPGVWTTYMLILFFGWLVVLSVSGCSPGMAWTVVNLAH 60

Query:    62 FLITYHFFHWKKGTPFAEDQGIYNGLTWWEQIDNGQQLTRNRKFLTVVPVVLYLIASHTT 121
             F++TYH FHW KGTPFA+DQGIYNGLTWWEQ+DNGQQLTRNRKFLT+VPVVLYLIASHTT
Sbjct:    61 FVVTYHSFHWMKGTPFADDQGIYNGLTWWEQMDNGQQLTRNRKFLTLVPVVLYLIASHTT 120

Query:   122 DYQHPMLFFNTLAVFVLVVAKFPNMHKVRIFGINADK 158
             DY+HP LF NTLAV VLVVAKFPNMHKVRIFGIN DK
Sbjct:   121 DYRHPWLFLNTLAVMVLVVAKFPNMHKVRIFGINGDK 157




GO:0003674 "molecular_function" evidence=ND
GO:0005739 "mitochondrion" evidence=ISM
GO:0005783 "endoplasmic reticulum" evidence=ISS
GO:0006457 "protein folding" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA
GO:0010286 "heat acclimation" evidence=RCA
TAIR|locus:2165690 AT5G42000 "AT5G42000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
MGI|MGI:1913862 Ormdl3 "ORM1-like 3 (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
POMBASE|SPBC119.09c SPBC119.09c "ORMDL family protein (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
RGD|1560577 Ormdl3 "ORM1-like 3 (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:2181669 Ormdl1 "ORM1-like 1 (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q0VD15 ORMDL3 "ORM1-like protein 3" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2R9D6 ORMDL3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q53FV1 ORMDL2 "ORM1-like protein 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q8N138 ORMDL3 "ORM1-like protein 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
D2I2F3ORML3_AILMENo assigned EC number0.40540.93030.9607yesno
Q9VP04ORMDL_DROMENo assigned EC number0.3750.90500.9285yesno
Q5R570ORML3_PONABNo assigned EC number0.40540.93030.9607yesno
Q53FV1ORML2_HUMANNo assigned EC number0.41660.90500.9346yesno
Q0VD15ORML3_BOVINNo assigned EC number0.40540.93030.9607yesno
Q921I0ORML1_MOUSENo assigned EC number0.42360.90500.9346yesno
Q5XJR6ORML3_DANRENo assigned EC number0.39590.93670.9673yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query158
pfam04061135 pfam04061, ORMDL, ORMDL family 4e-66
COG5081180 COG5081, COG5081, Predicted membrane protein [Func 6e-33
>gnl|CDD|190849 pfam04061, ORMDL, ORMDL family Back     alignment and domain information
 Score =  197 bits (503), Expect = 4e-66
 Identities = 65/135 (48%), Positives = 86/135 (63%)

Query: 16  NRNTEWFTYPGVWTTYILILFFAWLIVLSVFGCSPGMAWTIVNLAHFLITYHFFHWKKGT 75
           N N  W    G W  Y++++    L +LS+ G S   AWT+ NL H + +Y FFHW KGT
Sbjct: 1   NPNANWVNQRGAWLIYVVLILLLKLFLLSIPGFSTEWAWTLTNLIHNIGSYIFFHWVKGT 60

Query: 76  PFAEDQGIYNGLTWWEQIDNGQQLTRNRKFLTVVPVVLYLIASHTTDYQHPMLFFNTLAV 135
           PF  DQG Y+ LT WEQID G Q T  RKFLTVVP+VL+L+++H T Y   +   N +A+
Sbjct: 61  PFEFDQGAYDNLTMWEQIDEGAQYTPARKFLTVVPIVLFLLSTHYTHYDLTLFIINLIAL 120

Query: 136 FVLVVAKFPNMHKVR 150
            V+V+ K P MH+VR
Sbjct: 121 LVVVIPKLPFMHRVR 135


Evidence form suggests that ORMDLs are involved in protein folding in the ER. Orm proteins have been identified as negative regulators of sphingolipid synthesis that form a conserved complex with serine palmitoyltransferase, the first and rate-limiting enzyme in sphingolipid production. This novel and conserved protein complex, has been termed the SPOTS complex (serine palmitoyltransferase, Orm1/2, Tsc3, and Sac1). Length = 135

>gnl|CDD|227413 COG5081, COG5081, Predicted membrane protein [Function unknown] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 158
KOG3319153 consensus Predicted membrane protein [Function unk 100.0
PF04061136 ORMDL: ORMDL family ; InterPro: IPR007203 ORMDL1 b 100.0
COG5081180 Predicted membrane protein [Function unknown] 100.0
>KOG3319 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
Probab=100.00  E-value=5.6e-82  Score=499.03  Aligned_cols=153  Identities=54%  Similarity=0.956  Sum_probs=150.7

Q ss_pred             hhhhcCCCCCCCCCcceecCCchhhhHHHHHHHHHHHHHhhcCCCcCcchhhhhHHHHhHhhheeeeecCcCCCCCcccc
Q 031522            5 LYVKATPPADLNRNTEWFTYPGVWTTYILILFFAWLIVLSVFGCSPGMAWTIVNLAHFLITYHFFHWKKGTPFAEDQGIY   84 (158)
Q Consensus         5 ~~~~~~~~~~~N~N~~W~~~~G~W~~yiv~i~l~~l~~l~ip~~s~~~sWTltn~~h~~~ty~~fHwvKGtPF~~~qG~y   84 (158)
                      ++.++++++|+|+|++|++|||+|++|+++|+++|++++|+||+|.+++|||||++|+++||+||||+|||||++|||+|
T Consensus         1 m~~~~~~~~~~N~Nt~w~~~rG~Wl~yil~i~ll~l~~ls~p~~s~~~aWTltnl~h~~~tyi~fH~vkGtPF~~d~g~y   80 (153)
T KOG3319|consen    1 MMDVADQHSDVNPNTRWVNQRGAWLIYILIILLLHLVLLSIPFVSPPWAWTLTNLIHNIGTYIFFHWVKGTPFEDDQGAY   80 (153)
T ss_pred             CCccccCcCcCCCCceeeecCchHHHHHHHHHHHHHHHHhCccCCcchhHHHHHHHHHHhHheeEEEecCCCCcCCCcHh
Confidence            36789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcceeeecCCCCCCccceeehhhhHHHHHHhhcccCCCCchhhhHHHHhhhhhhcCCCccceeeeecccCC
Q 031522           85 NGLTWWEQIDNGQQLTRNRKFLTVVPVVLYLIASHTTDYQHPMLFFNTLAVFVLVVAKFPNMHKVRIFGINAD  157 (158)
Q Consensus        85 ~~LT~WEQID~g~q~T~trKFL~~vPIvLFllsthyt~yd~~~f~iN~~~l~~vviPKLP~~HrvRifGINk~  157 (158)
                      |+||||||||+|.||||+||||+++||+||++||||||||..+|++|++|+++|++||||+||||||||||||
T Consensus        81 ~~lT~WEQid~g~q~T~~RKFLtivPIvLfl~~s~yt~y~~~~F~~N~~sl~~v~iPKlp~~H~vRIfgIn~~  153 (153)
T KOG3319|consen   81 RLLTHWEQIDDGVQYTPSRKFLTIVPIVLFLLASHYTKYDHPLFLLNTLSLFVVVIPKLPQMHGVRIFGINKY  153 (153)
T ss_pred             hhccHHHHhccccccccchhhhhHHHHHHHHHHHHhhccCcchhHHHHHHHHhhhhccccccceEEEecccCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999997



>PF04061 ORMDL: ORMDL family ; InterPro: IPR007203 ORMDL1 belongs to a novel gene family comprising three genes in humans (ORMDL1, ORMDL2 and ORMDL3), and homologs in yeast, microsporidia, plants, Drosophila, urochordates and vertebrates Back     alignment and domain information
>COG5081 Predicted membrane protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00