Citrus Sinensis ID: 031640

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150------
Protein Sequence
MSQISRSRFAGAVGYHHPPFPLSDDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIKITGV
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccEEEEEEEccccccccEEEEEEcccEEEEEEEEEccEEEEcccEEEEEEEccEEEEEEEcccccccccEEEEEcccEEEEEEccccccccccccEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccHccccccccccccccccccccccccccccccccHHHHHccccccccccccEEEEEEccccccccEEEEEEcccEEEEEccccEEccccccEEEEEEEccccEEEEEEccccccHHEEEEEEcccEEEEEEcccccccccccEEEEEEccc
Coil and Loop (DISEMBL)
msqisrsrfagavgyhhppfplsddtwnggqfqhvyqfsppmmiptridwhdtpechvfkadlsgfhkhdvkveiEDGRVLCISGekkiekeertdeghRLEVAVGKfsrrfqlpenamVDRITAHianstltvtvpkkdikkhhghsrsikitgv
Flexible Loop (DISEMBL)
MSQISRSRFAGAVGYHHPPFPLSDDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISgekkiekeertdeghrlevavgkfsrrfqlPENAMVDRITAhianstltvtvpkkdikkhhghsrsikitgv
Low Complexity Region (SEG)
MSQISRSRFAGAVGYHHPPFPLSDDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIKITGV
Disordered region (IsUnstruct)
*********AGAVGYHHPPFPLSDDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISG***************LEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTV********************
Disordered Region (DISOPRED)
*SQIS**RFAGAVGYHHPPFPLSDDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVL******************RLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVP************SIKITGV
Disordered Region (DISEMBL)
MSQISRSRFAGAVGYHHPPFPLSDDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKK*****************
Disordered Region (DISPRO)
*************GYHHPPFPLSDDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIKIT**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSQISRSRFAGAVGYHHPPFPLSDDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIKITGV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	156	2.2.26 [Sep-21-2011]
P27880	158	18.2 kDa class I heat sho	N/A	no	0.852	0.841	0.496	4e-32
P27879	143	18.1 kDa class I heat sho	N/A	no	0.833	0.909	0.5	1e-31
P02519	153	17.3 kDa class I heat sho	no	no	0.852	0.869	0.485	1e-30
P04794	154	17.5 kDa class I heat sho	no	no	0.852	0.863	0.489	1e-30
P05478	161	18.5 kDa class I heat sho	no	no	0.839	0.813	0.474	1e-29
P04793	153	17.5 kDa class I heat sho	no	no	0.852	0.869	0.463	4e-29
Q9LNW0	157	17.8 kDa class I heat sho	yes	no	0.865	0.859	0.471	5e-29
P19243	158	18.1 kDa class I heat sho	N/A	no	0.942	0.930	0.477	9e-29
Q9XIE3	155	17.6 kDa class I heat sho	no	no	0.865	0.870	0.474	1e-28
Q84Q77	161	17.9 kDa class I heat sho	yes	no	0.692	0.670	0.545	3e-28

>sp|P27880|HSP12_MEDSA 18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1

 Score =  137 bits (344), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 67/135 (49%), Positives = 90/135 (66%), Gaps = 2/135 (1%)

Query: 21  PLSDDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRV 80
           P  D  +N       +       + TR+DW +TPE HVFKADL G  K +VKVEIED RV
Sbjct: 26  PFKDFPFNNSALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRV 85

Query: 81  LCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKD 140
           L ISGE+ +EKE++ D+ HRLE + GKF RRF+LPENA +D++ A + N  LTVTVPK++
Sbjct: 86  LQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEE 145

Query: 141 IKKHHGHSRSIKITG 155
           +KK     ++I I+G
Sbjct: 146 VKKP--EVKTIDISG 158

Medicago sativa (taxid: 3879)

>sp|P27879|HSP11_MEDSA 18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1

 Score =  135 bits (340), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/136 (50%), Positives = 91/136 (66%), Gaps = 6/136 (4%)

Query: 20  FPLSDDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGR 79
           FP ++   +   F           + TRIDW +TPE HVFKADL G  K +VKVEIED R
Sbjct: 14  FPFTNSALSASSFPQENS----AFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDR 69

Query: 80  VLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKK 139
           VL ISGE+ +EKE++ D+ HR+E + GKF RRF+LPENA +D++ A + N  LTVTVPK+
Sbjct: 70  VLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKE 129

Query: 140 DIKKHHGHSRSIKITG 155
           +IKK     +SI+I+ 
Sbjct: 130 EIKK--PEVKSIEISS 143

Medicago sativa (taxid: 3879)

>sp|P02519|HSP11_SOYBN 17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1

 Score =  132 bits (332), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 67/138 (48%), Positives = 91/138 (65%), Gaps = 5/138 (3%)

Query: 21  PLSDDTWNGGQ---FQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIED 77
           P S D W+  +   F           + TR+DW +TPE HVFKAD+ G  K +VK+EI+D
Sbjct: 18  PFSLDVWDPFKDFPFPSSLSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQD 77

Query: 78  GRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVP 137
           GRVL ISGE+ +EKE++ D  HR+E + GK  RRF+LPENA VD++ A + N  LTVTVP
Sbjct: 78  GRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVP 137

Query: 138 KKDIKKHHGHSRSIKITG 155
           K++IKK     ++I I+G
Sbjct: 138 KEEIKKP--DVKAIDISG 153

Glycine max (taxid: 3847)

>sp|P04794|HSP14_SOYBN 17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1

 Score =  131 bits (330), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 68/139 (48%), Positives = 94/139 (67%), Gaps = 6/139 (4%)

Query: 21  PLSDDTWNGGQFQHVYQFS----PPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIE 76
           P S D W+  +  HV   S        + TR+DW +TPE HVFKAD+ G  K +VKV+IE
Sbjct: 18  PFSLDMWDPFKDFHVPTSSVSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIE 77

Query: 77  DGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTV 136
           D RVL ISGE+ +EKE++ D  HR+E + GKF+RRF+LPENA V+ + A + N  LTVTV
Sbjct: 78  DDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTV 137

Query: 137 PKKDIKKHHGHSRSIKITG 155
           PK+++KK     ++I+I+G
Sbjct: 138 PKEEVKKP--DVKAIEISG 154

Glycine max (taxid: 3847)

>sp|P05478|HSP16_SOYBN 18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1

 Score =  128 bits (322), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/137 (47%), Positives = 93/137 (67%), Gaps = 6/137 (4%)

Query: 19  PFPLSDDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDG 78
           PFP   +T +   F   +       + TR+DW +TPE HVFKAD+ G  K +VKV+IED 
Sbjct: 31  PFP---NTLSSASFPE-FSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDD 86

Query: 79  RVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPK 138
           +VL ISGE+ +EKE++ D  HR+E + GKF RRF+LPENA V+++ A + N  LTVTVPK
Sbjct: 87  KVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPK 146

Query: 139 KDIKKHHGHSRSIKITG 155
           +++KK     ++I+I+G
Sbjct: 147 EEVKKP--DVKAIEISG 161

Glycine max (taxid: 3847)

>sp|P04793|HSP13_SOYBN 17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1

 Score =  126 bits (317), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 64/138 (46%), Positives = 91/138 (65%), Gaps = 5/138 (3%)

Query: 21  PLSDDTWNGGQ---FQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIED 77
           P S D W+  +   F           + TR+DW +TPE HVF+AD+ G  K +VKV+IED
Sbjct: 18  PFSLDVWDPFKDFHFPTSLSAENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIED 77

Query: 78  GRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVP 137
            RVL ISGE+ +EKE++ D  HR+E + G F RRF+LPENA V+++ A + N  LTVTVP
Sbjct: 78  DRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVP 137

Query: 138 KKDIKKHHGHSRSIKITG 155
           K+++KK     ++I+I+G
Sbjct: 138 KEEVKK--PDVKAIEISG 153

Glycine max (taxid: 3847)

>sp|Q9LNW0|HS178_ARATH 17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1

 Score =  126 bits (317), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 65/138 (47%), Positives = 85/138 (61%), Gaps = 3/138 (2%)

Query: 21  PLSDDTWN---GGQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIED 77
           P S D W+     QF          +   R+DW +T E HVFKADL G  K +VKVEIED
Sbjct: 20  PFSLDVWDPFKELQFPSSLSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIED 79

Query: 78  GRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVP 137
             VL ISGE+ +EKEE+ D  HR+E + G+FSR+F+LPEN  +D++ A + N  LTVTVP
Sbjct: 80  DSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVLTVTVP 139

Query: 138 KKDIKKHHGHSRSIKITG 155
           K +  K     +SI I+G
Sbjct: 140 KVEEAKKKAQVKSIDISG 157

Arabidopsis thaliana (taxid: 3702)

>sp|P19243|HSP11_PEA 18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1

 Score =  125 bits (314), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 74/155 (47%), Positives = 99/155 (63%), Gaps = 8/155 (5%)

Query: 7   SRFAGAVGYHHPPF------PLSDDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFK 60
           S F+G       PF      PL D  ++       +    P  + TR+DW +TPE HVFK
Sbjct: 6   SFFSGRRSNVFDPFSLDVWDPLKDFPFSNSSPSASFPRENPAFVSTRVDWKETPEAHVFK 65

Query: 61  ADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMV 120
           ADL G  K +VKVE+ED RVL ISGE+ +EKE++ DE HR+E + GKF RRF+LPENA +
Sbjct: 66  ADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKM 125

Query: 121 DRITAHIANSTLTVTVPKKDIKKHHGHSRSIKITG 155
           D++ A + N  LTVTVPK++IKK     +SI+I+G
Sbjct: 126 DKVKASMENGVLTVTVPKEEIKK--AEVKSIEISG 158

Pisum sativum (taxid: 3888)

>sp|Q9XIE3|HS17A_ARATH 17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1

 Score =  125 bits (313), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/135 (47%), Positives = 84/135 (62%)

Query: 21  PLSDDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRV 80
           P S D W+  +       S   +   R+DW +T E HVFKADL G  K +VKVEIED  V
Sbjct: 21  PFSLDVWDPFKELQFPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSV 80

Query: 81  LCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKD 140
           L ISGE+ +EKEE+ D  HR+E + G FSR+F+LPEN  +D++ A + N  LTVTVPK +
Sbjct: 81  LKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPKVE 140

Query: 141 IKKHHGHSRSIKITG 155
             K     +SI I+G
Sbjct: 141 TNKKKAQVKSIDISG 155

Possesses chaperone activity.

Arabidopsis thaliana (taxid: 3702)

>sp|Q84Q77|HS17A_ORYSJ 17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1

 Score =  124 bits (310), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 60/110 (54%), Positives = 82/110 (74%), Gaps = 2/110 (1%)

Query: 46  TRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAV 105
            RIDW +TPE HVFKAD+ G  K +VKVE++DG +L ISGE+  E+EE+TD+ HR+E + 
Sbjct: 54  ARIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSS 113

Query: 106 GKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIKITG 155
           GKF RRF+LP+NA  ++I A + N  LTVTVPK++ KK     +SI+I+G
Sbjct: 114 GKFLRRFRLPDNAKPEQIKASMENGVLTVTVPKEEAKKP--DVKSIQISG 161

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	156
123556	158	RecName: Full=18.2 kDa class I heat shoc	0.852	0.841	0.496	2e-30
357498829	159	18.2 kDa class I heat shock protein [Med	0.826	0.811	0.510	5e-30
388505996	161	unknown [Medicago truncatula]	0.833	0.807	0.5	6e-30
123554	143	RecName: Full=18.1 kDa class I heat shoc	0.833	0.909	0.5	6e-30
357498815	159	18.2 kDa class I heat shock protein [Med	0.833	0.817	0.5	9e-30
357475983	159	18.2 kDa class I heat shock protein [Med	0.711	0.698	0.566	1e-29
217075124	161	unknown [Medicago truncatula] gi|3885161	0.833	0.807	0.492	2e-29
224146364	152	predicted protein [Populus trichocarpa]	0.711	0.730	0.575	2e-29
224132048	159	predicted protein [Populus trichocarpa]	0.711	0.698	0.575	2e-29
284433776	158	heat-shock protein [Jatropha curcas]	0.711	0.702	0.575	3e-29

>gi|123556|sp|P27880.1|HSP12_MEDSA RecName: Full=18.2 kDa class I heat shock protein gi|19618|emb|CAA41547.1| heat shock protein [Medicago sativa]

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/135 (49%), Positives = 90/135 (66%), Gaps = 2/135 (1%)

Query: 21  PLSDDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRV 80
           P  D  +N       +       + TR+DW +TPE HVFKADL G  K +VKVEIED RV
Sbjct: 26  PFKDFPFNNSALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRV 85

Query: 81  LCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKD 140
           L ISGE+ +EKE++ D+ HRLE + GKF RRF+LPENA +D++ A + N  LTVTVPK++
Sbjct: 86  LQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEE 145

Query: 141 IKKHHGHSRSIKITG 155
           +KK     ++I I+G
Sbjct: 146 VKKP--EVKTIDISG 158

Source: Medicago sativa

Species: Medicago sativa

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357498829|ref|XP_003619703.1| 18.2 kDa class I heat shock protein [Medicago truncatula] gi|355494718|gb|AES75921.1| 18.2 kDa class I heat shock protein [Medicago truncatula]

 Score =  135 bits (341), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 70/137 (51%), Positives = 94/137 (68%), Gaps = 8/137 (5%)

Query: 20  FPLSDDTWNGGQF-QHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDG 78
           FPL++   +   F Q    F+      TRIDW +TPE HVFKADL G  K +VKVEIED 
Sbjct: 30  FPLTNSALSASSFPQENSAFAS-----TRIDWKETPEAHVFKADLPGLKKEEVKVEIEDD 84

Query: 79  RVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPK 138
           RVL ISGE+ +EKE++ D+ HR+E + GKF RRF+LPENA +D++ A + N  LTVTVPK
Sbjct: 85  RVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGILTVTVPK 144

Query: 139 KDIKKHHGHSRSIKITG 155
           +++KK     ++I I+G
Sbjct: 145 EEVKKP--QVKTIDISG 159

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388505996|gb|AFK41064.1| unknown [Medicago truncatula]

 Score =  135 bits (340), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 68/136 (50%), Positives = 92/136 (67%), Gaps = 6/136 (4%)

Query: 20  FPLSDDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGR 79
           FP ++ + +   F           + TRIDW +TPE HVFKADL G  K +VKVEIED R
Sbjct: 32  FPFTNSSLSASSFPQENS----AFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDR 87

Query: 80  VLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKK 139
           VL ISGE+  EKE++ D+ HR+E + GKF RRF+LPENA +D++ A + N  LTVTVPK+
Sbjct: 88  VLQISGERNFEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKE 147

Query: 140 DIKKHHGHSRSIKITG 155
           ++KK     +SI+I+G
Sbjct: 148 EVKKP--DVKSIEISG 161

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|123554|sp|P27879.1|HSP11_MEDSA RecName: Full=18.1 kDa class I heat shock protein gi|19616|emb|CAA41546.1| heat shock protein [Medicago sativa]

 Score =  135 bits (340), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 68/136 (50%), Positives = 91/136 (66%), Gaps = 6/136 (4%)

Query: 20  FPLSDDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGR 79
           FP ++   +   F           + TRIDW +TPE HVFKADL G  K +VKVEIED R
Sbjct: 14  FPFTNSALSASSFPQENS----AFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDR 69

Query: 80  VLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKK 139
           VL ISGE+ +EKE++ D+ HR+E + GKF RRF+LPENA +D++ A + N  LTVTVPK+
Sbjct: 70  VLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKE 129

Query: 140 DIKKHHGHSRSIKITG 155
           +IKK     +SI+I+ 
Sbjct: 130 EIKK--PEVKSIEISS 143

Source: Medicago sativa

Species: Medicago sativa

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357498815|ref|XP_003619696.1| 18.2 kDa class I heat shock protein [Medicago truncatula] gi|355494711|gb|AES75914.1| 18.2 kDa class I heat shock protein [Medicago truncatula]

 Score =  134 bits (338), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 68/136 (50%), Positives = 92/136 (67%), Gaps = 6/136 (4%)

Query: 20  FPLSDDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGR 79
           FPL++   +   F           + TRIDW +TPE HVFKADL G  K +VKVEIE  R
Sbjct: 30  FPLTNSALSASSFPQENS----AFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEGDR 85

Query: 80  VLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKK 139
           VL ISGE+ +EKE++ D+ HR+E + GKF RRF+LPENA +D++ A + N  LTVTVPK+
Sbjct: 86  VLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKE 145

Query: 140 DIKKHHGHSRSIKITG 155
           ++KK     +SI+I+G
Sbjct: 146 EVKKP--DVKSIEISG 159

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357475983|ref|XP_003608277.1| 18.2 kDa class I heat shock protein [Medicago truncatula] gi|87240494|gb|ABD32352.1| Heat shock protein Hsp20 [Medicago truncatula] gi|355509332|gb|AES90474.1| 18.2 kDa class I heat shock protein [Medicago truncatula] gi|388515885|gb|AFK46004.1| unknown [Medicago truncatula] gi|388519103|gb|AFK47613.1| unknown [Medicago truncatula]

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 64/113 (56%), Positives = 86/113 (76%), Gaps = 2/113 (1%)

Query: 43  MIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLE 102
            + TRIDW +TPE HVFKADL G  K +VKVEIED RVL ISGE+ +EKE++ ++ HR+E
Sbjct: 49  FVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNNQWHRVE 108

Query: 103 VAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIKITG 155
            + GKF RRF+LPENA +D++ A + N  LTVTVPK+++KK     +SI+I+G
Sbjct: 109 RSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKP--DVKSIEISG 159

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217075124|gb|ACJ85922.1| unknown [Medicago truncatula] gi|388516171|gb|AFK46147.1| unknown [Medicago truncatula]

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/136 (49%), Positives = 91/136 (66%), Gaps = 6/136 (4%)

Query: 20  FPLSDDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGR 79
           FP ++ + +   F           + TRIDW +TPE HVFKADL G  K +VKVEIED R
Sbjct: 32  FPFTNSSLSASSFPQENS----AFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDR 87

Query: 80  VLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKK 139
           VL ISGE+  EKE++ D+ HR+E + GKF RRF+LPENA +D++ A + N  L VTVPK+
Sbjct: 88  VLQISGERNFEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLAVTVPKE 147

Query: 140 DIKKHHGHSRSIKITG 155
           +IKK     ++I+I+G
Sbjct: 148 EIKKP--EVKAIEISG 161

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224146364|ref|XP_002325980.1| predicted protein [Populus trichocarpa] gi|222862855|gb|EEF00362.1| predicted protein [Populus trichocarpa]

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/113 (57%), Positives = 85/113 (75%), Gaps = 2/113 (1%)

Query: 43  MIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLE 102
            + TRIDW +TPE HVFKADL G  K +VKVEIED RVL ISGE+ +EKE++ D  HR+E
Sbjct: 42  FVKTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDTWHRVE 101

Query: 103 VAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIKITG 155
            + GKF RRF+LPENA VD++ A + N  LTVTVPK+++KK     ++I+I+G
Sbjct: 102 RSSGKFVRRFRLPENAKVDQVKASMENGVLTVTVPKEEVKK--PDVKAIEISG 152

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224132048|ref|XP_002328172.1| predicted protein [Populus trichocarpa] gi|222837687|gb|EEE76052.1| predicted protein [Populus trichocarpa]

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/113 (57%), Positives = 85/113 (75%), Gaps = 2/113 (1%)

Query: 43  MIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLE 102
            + TRIDW +TPE HVFKADL G  K +VKVEIED RVL ISGE+ +EKE++ D  HR+E
Sbjct: 49  FVNTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDAWHRVE 108

Query: 103 VAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIKITG 155
            + GKF RRF+LPENA +D++ A + N  LTVTVPK++IKK     ++I+I+G
Sbjct: 109 RSSGKFLRRFRLPENAKMDQVKASMENGVLTVTVPKEEIKKP--DVKAIEISG 159

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|284433776|gb|ADB85094.1| heat-shock protein [Jatropha curcas]

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 65/113 (57%), Positives = 85/113 (75%), Gaps = 2/113 (1%)

Query: 43  MIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLE 102
            + TR+DW +TPE HVFKADL G  K +VKVEIED RVL ISGEK +EKE++ D  HR+E
Sbjct: 48  FVSTRVDWKETPEAHVFKADLPGIKKEEVKVEIEDDRVLQISGEKHMEKEDKNDTWHRVE 107

Query: 103 VAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIKITG 155
            + GKFSRRF+LPENA +D++ A + N  LTVTVPK ++KK     ++I+I+G
Sbjct: 108 RSSGKFSRRFRLPENAKIDQVKASMENGVLTVTVPKAEVKK--PDVKAIQISG 158

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	156
UNIPROTKB|P27777	150	HSP16.9A "16.9 kDa class I hea	0.685	0.713	0.550	5e-28
UNIPROTKB|Q84Q72	161	HSP18.1 "18.1 kDa class I heat	0.685	0.664	0.568	6.4e-28
UNIPROTKB|Q943E6	150	HSP16.9B "16.9 kDa class I hea	0.685	0.713	0.550	6.4e-28
UNIPROTKB|Q943E7	149	HSP16.9C "16.9 kDa class I hea	0.685	0.718	0.541	6.4e-28
TAIR|locus:2025921	155	AT1G59860 [Arabidopsis thalian	0.865	0.870	0.474	6.4e-28
UNIPROTKB|P31673	154	HSP17.4 "17.4 kDa class I heat	0.685	0.694	0.577	1e-27
TAIR|locus:2042977	153	AT2G29500 "AT2G29500" [Arabido	0.839	0.856	0.467	1e-27
UNIPROTKB|Q84Q77	161	HSP17.9A "17.9 kDa class I hea	0.685	0.664	0.550	1.3e-27
TAIR|locus:2024997	157	AT1G07400 [Arabidopsis thalian	0.865	0.859	0.471	1.7e-27
TAIR|locus:2024862	157	AT1G53540 [Arabidopsis thalian	0.685	0.681	0.541	9.4e-27

UNIPROTKB|P27777 HSP16.9A "16.9 kDa class I heat shock protein 1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 60/109 (55%), Positives = 82/109 (75%)

Query:    47 RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVG 106
             RIDW +TPE HVFKADL G  K +VKVE+E+G VL ISG++  EKE++ D+ HR+E + G
Sbjct:    44 RIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSG 103

Query:   107 KFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIKITG 155
             +F RRF+LPENA VD++ A + N  LTVTVPK ++KK     ++I+I+G
Sbjct:   104 QFMRRFRLPENAKVDQVKAGLENGVLTVTVPKAEVKKPE--VKAIEISG 150

GO:0009408 "response to heat" evidence=IEP;IDA

GO:0051259 "protein oligomerization" evidence=IDA

UNIPROTKB|Q84Q72 HSP18.1 "18.1 kDa class I heat shock protein" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 62/109 (56%), Positives = 81/109 (74%)

Query:    47 RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVG 106
             RIDW +TPE HVFKAD+ G  K +VKVE+EDG VL ISGE+  E+EE+TD+ HR+E + G
Sbjct:    55 RIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSG 114

Query:   107 KFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIKITG 155
             KF RRF+LPEN   ++I A + N  LTVTVPK++ KK     +SI++TG
Sbjct:   115 KFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPD--VKSIQVTG 161

GO:0009408 "response to heat" evidence=IEP

GO:0042542 "response to hydrogen peroxide" evidence=IEP

GO:0045471 "response to ethanol" evidence=IEP

GO:0046685 "response to arsenic-containing substance" evidence=IEP

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0046688 "response to copper ion" evidence=IEP

UNIPROTKB|Q943E6 HSP16.9B "16.9 kDa class I heat shock protein 2" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 60/109 (55%), Positives = 82/109 (75%)

Query:    47 RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVG 106
             RIDW +TPE HVFKADL G  K +VKVE+E+G VL ISG++  EKE++ D+ HR+E + G
Sbjct:    44 RIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSG 103

Query:   107 KFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIKITG 155
             +F RRF+LPENA VD++ A + N  LTVTVPK ++KK     ++I+I+G
Sbjct:   104 QFMRRFRLPENAKVDQVKAGMENGVLTVTVPKAEVKKPE--VKAIEISG 150

GO:0009408 "response to heat" evidence=IEP

UNIPROTKB|Q943E7 HSP16.9C "16.9 kDa class I heat shock protein 3" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 59/109 (54%), Positives = 82/109 (75%)

Query:    47 RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVG 106
             R+DW +TPE HVFKADL G  K +VKVE+E+G VL ISG++  EKE++ D+ HR+E + G
Sbjct:    43 RVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSG 102

Query:   107 KFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIKITG 155
             +F RRF+LPENA VD++ A + N  LTVTVPK ++KK     ++I+I+G
Sbjct:   103 QFMRRFRLPENAKVDQVKASMENGVLTVTVPKAEVKKPE--VKAIEISG 149

GO:0009408 "response to heat" evidence=IEP

TAIR|locus:2025921 AT1G59860 [Arabidopsis thaliana (taxid:3702)]

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 64/135 (47%), Positives = 84/135 (62%)

Query:    21 PLSDDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRV 80
             P S D W+  +       S   +   R+DW +T E HVFKADL G  K +VKVEIED  V
Sbjct:    21 PFSLDVWDPFKELQFPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSV 80

Query:    81 LCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKD 140
             L ISGE+ +EKEE+ D  HR+E + G FSR+F+LPEN  +D++ A + N  LTVTVPK +
Sbjct:    81 LKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPKVE 140

Query:   141 IKKHHGHSRSIKITG 155
               K     +SI I+G
Sbjct:   141 TNKKKAQVKSIDISG 155

GO:0005737 "cytoplasm" evidence=ISM

GO:0009408 "response to heat" evidence=IEP;ISS

GO:0006457 "protein folding" evidence=IDA

GO:0006970 "response to osmotic stress" evidence=IEP

GO:0009651 "response to salt stress" evidence=IDA

GO:0051259 "protein oligomerization" evidence=IDA

UNIPROTKB|P31673 HSP17.4 "17.4 kDa class I heat shock protein" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 63/109 (57%), Positives = 81/109 (74%)

Query:    47 RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVG 106
             RIDW +TPE HVFKAD+ G  K +VKVE+EDG VL ISGE+  E+EE+TD+ HR+E + G
Sbjct:    48 RIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSG 107

Query:   107 KFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIKITG 155
             KF RRF+LPEN   ++I A + N  LTVTVPK++ KK     +SI+ITG
Sbjct:   108 KFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPD--VKSIQITG 154

GO:0009408 "response to heat" evidence=IEP

GO:0042542 "response to hydrogen peroxide" evidence=IEP

GO:0045471 "response to ethanol" evidence=IEP

GO:0046685 "response to arsenic-containing substance" evidence=IEP

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0046688 "response to copper ion" evidence=IEP

TAIR|locus:2042977 AT2G29500 "AT2G29500" [Arabidopsis thaliana (taxid:3702)]

 Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 65/139 (46%), Positives = 91/139 (65%)

Query:    21 PLSDDTWNGGQFQHVYQFS----PPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIE 76
             P S D W+   F+ +   S       ++  R+DW +TPE HVFKADL G  K +VKVEIE
Sbjct:    19 PFSLDVWD--PFKELTSSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIE 76

Query:    77 DGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTV 136
             +  VL ISGE+ +EKE++ D  HR+E + G+F+RRF+LPEN  +D++ A + N  LTVTV
Sbjct:    77 EDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTV 136

Query:   137 PKKDIKKHHGHSRSIKITG 155
             PK + KK     +SI+I+G
Sbjct:   137 PKAETKK--ADVKSIQISG 153

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0009408 "response to heat" evidence=IEP;ISS;RCA

GO:0006979 "response to oxidative stress" evidence=IEP

GO:0009644 "response to high light intensity" evidence=IEP;RCA

GO:0042542 "response to hydrogen peroxide" evidence=IEP;RCA

GO:0006457 "protein folding" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

UNIPROTKB|Q84Q77 HSP17.9A "17.9 kDa class I heat shock protein" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 60/109 (55%), Positives = 82/109 (75%)

Query:    47 RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVG 106
             RIDW +TPE HVFKAD+ G  K +VKVE++DG +L ISGE+  E+EE+TD+ HR+E + G
Sbjct:    55 RIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSG 114

Query:   107 KFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIKITG 155
             KF RRF+LP+NA  ++I A + N  LTVTVPK++ KK     +SI+I+G
Sbjct:   115 KFLRRFRLPDNAKPEQIKASMENGVLTVTVPKEEAKKPD--VKSIQISG 161

GO:0009408 "response to heat" evidence=IEP

TAIR|locus:2024997 AT1G07400 [Arabidopsis thaliana (taxid:3702)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 65/138 (47%), Positives = 85/138 (61%)

Query:    21 PLSDDTWNGG---QFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIED 77
             P S D W+     QF          +   R+DW +T E HVFKADL G  K +VKVEIED
Sbjct:    20 PFSLDVWDPFKELQFPSSLSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIED 79

Query:    78 GRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVP 137
               VL ISGE+ +EKEE+ D  HR+E + G+FSR+F+LPEN  +D++ A + N  LTVTVP
Sbjct:    80 DSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVLTVTVP 139

Query:   138 KKDIKKHHGHSRSIKITG 155
             K +  K     +SI I+G
Sbjct:   140 KVEEAKKKAQVKSIDISG 157

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0009408 "response to heat" evidence=ISS

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2024862 AT1G53540 [Arabidopsis thaliana (taxid:3702)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 59/109 (54%), Positives = 78/109 (71%)

Query:    47 RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVG 106
             ++DW +TPE HVFKADL G  K +VKVE+EDG +L ISGE+  E EE+ D+ HR+E + G
Sbjct:    51 KVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSG 110

Query:   107 KFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIKITG 155
             KF+RRF+LPENA ++ I A + N  L+VTVPK   KK     +SI I+G
Sbjct:   111 KFTRRFRLPENAKMEEIKASMENGVLSVTVPKVPEKKPE--VKSIDISG 157

GO:0005737 "cytoplasm" evidence=ISM

GO:0009408 "response to heat" evidence=ISS;RCA

GO:0006457 "protein folding" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q84Q77	HS17A_ORYSJ	No assigned EC number	0.5454	0.6923	0.6708	yes	no
Q9LNW0	HS178_ARATH	No assigned EC number	0.4710	0.8653	0.8598	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0066002801 hypothetical protein (160 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	156
cd06472	92	cd06472, ACD_ScHsp26_like, Alpha crystallin domain	8e-37
pfam00011	101	pfam00011, HSP20, Hsp20/alpha crystallin family	1e-28
cd06464	88	cd06464, ACD_sHsps-like, Alpha-crystallin domain (	4e-25
COG0071	146	COG0071, IbpA, Molecular chaperone (small heat sho	3e-19
cd00298	80	cd00298, ACD_sHsps_p23-like, This domain family in	2e-18
cd06471	93	cd06471, ACD_LpsHSP_like, Group of bacterial prote	1e-15
cd06526	83	cd06526, metazoan_ACD, Alpha-crystallin domain (AC	6e-09
cd06470	90	cd06470, ACD_IbpA-B_like, Alpha-crystallin domain	5e-07
COG2309	385	COG2309, AmpS, Leucyl aminopeptidase (aminopeptida	2e-04

>gnl|CDD|107229 cd06472, ACD_ScHsp26_like, Alpha crystallin domain (ACD) found in Saccharomyces cerevisiae (Sc) small heat shock protein (Hsp)26 and similar proteins

 Score =  121 bits (306), Expect = 8e-37
 Identities = 56/92 (60%), Positives = 71/92 (77%)

Query: 47  RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVG 106
           R+DW +TPE HVFKAD+ G  K DVKVE+EDGRVL ISGE+K E+E++ D+ HR+E + G
Sbjct: 1   RVDWKETPEAHVFKADVPGVKKEDVKVEVEDGRVLRISGERKKEEEKKGDDWHRVERSSG 60

Query: 107 KFSRRFQLPENAMVDRITAHIANSTLTVTVPK 138
           +F RRF+LPENA  D + A + N  LTVTVPK
Sbjct: 61  RFVRRFRLPENADADEVKAFLENGVLTVTVPK 92

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. ScHsp26 is temperature-regulated, it switches from an inactive to a chaperone-active form upon elevation in temperature. It associates into large 24-mers storage forms which upon heat shock disassociate into dimers. These dimers initiate the interaction with non-native substrate proteins and re-assemble into large globular assemblies having one monomer of substrate bound per dimer. This group also contains Arabidopsis thaliana (Ath) Hsp15.7, a peroxisomal matrix protein which can complement the morphological phenotype of S. cerevisiae mutants deficient in Hsps26. AthHsp15.7 is minimally expressed under normal conditions and is strongly induced by heat and oxidative stress. Also belonging to this group is wheat HSP16.9 which differs in quaternary structure from the shell-type particles of ScHsp26, it assembles as a dodecameric double disc, with each disc organized as a trimer of dimers. Length = 92

>gnl|CDD|215655 pfam00011, HSP20, Hsp20/alpha crystallin family

 Score =  101 bits (253), Expect = 1e-28
 Identities = 42/106 (39%), Positives = 58/106 (54%), Gaps = 5/106 (4%)

Query: 49  DWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKF 108
           D  +  +  V K D+ GF   ++KV++ED RVL        EKEE  D G R E +   F
Sbjct: 1   DIKEDKDAFVVKLDVPGFKPEELKVKVEDNRVLVKGKH---EKEEEDDHGLRSERSYRSF 57

Query: 109 SRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIKIT 154
           SR+F LPENA  D++ A + +  LTVTVPK +  +     R I+I 
Sbjct: 58  SRKFVLPENADPDKVKASLKDGVLTVTVPKLEPPE--KKPRRIQIQ 101

Length = 101

>gnl|CDD|107221 cd06464, ACD_sHsps-like, Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps)

 Score = 91.8 bits (229), Expect = 4e-25
 Identities = 44/90 (48%), Positives = 62/90 (68%), Gaps = 2/90 (2%)

Query: 49  DWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKF 108
           D ++T + +V +ADL GF K D+KVE+EDG VL ISGE++ E+EE  +   R E + G F
Sbjct: 1   DVYETDDAYVVEADLPGFKKEDIKVEVEDG-VLTISGEREEEEEEE-ENYLRRERSYGSF 58

Query: 109 SRRFQLPENAMVDRITAHIANSTLTVTVPK 138
           SR F+LPE+   D+I A + N  LT+T+PK
Sbjct: 59  SRSFRLPEDVDPDKIKASLENGVLTITLPK 88

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. Length = 88

>gnl|CDD|223149 COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]

 Score = 78.2 bits (193), Expect = 3e-19
 Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 7/117 (5%)

Query: 36  YQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERT 95
              +PP      +D  +T + +   A+L G  K D+++ +E    L I GE++ E+EE  
Sbjct: 37  PTGTPP------VDIEETDDEYRITAELPGVDKEDIEITVEGN-TLTIRGEREEEEEEEE 89

Query: 96  DEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIK 152
           +   R E A G+F R F+LPE    + I A   N  LTVT+PK + ++       I+
Sbjct: 90  EGYLRRERAYGEFERTFRLPEKVDPEVIKAKYKNGLLTVTLPKAEPEEKKPKRIEIE 146

Length = 146

>gnl|CDD|107219 cd00298, ACD_sHsps_p23-like, This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins

 Score = 74.2 bits (183), Expect = 2e-18
 Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 9/89 (10%)

Query: 50  WHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFS 109
           W+ T +  V   DL G  K D+KVE+ED   L ISG+++ E+E         E + G+F 
Sbjct: 1   WYQTDDEVVVTVDLPGVKKEDIKVEVEDNV-LTISGKREEEEER--------ERSYGEFE 51

Query: 110 RRFQLPENAMVDRITAHIANSTLTVTVPK 138
           R F+LPE+   ++  A + N  L +T+PK
Sbjct: 52  RSFELPEDVDPEKSKASLENGVLEITLPK 80

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind1), NUD (nuclear distribution) C, Melusin, and NAD(P)H cytochrome b5 (NCB5) oxidoreductase (OR). Length = 80

>gnl|CDD|107228 cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18

 Score = 67.5 bits (166), Expect = 1e-15
 Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 4/94 (4%)

Query: 47  RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGH--RLEVA 104
           + D  +T + ++ +ADL GF K D+K++ +DG  L IS ++   K+E+  +G+  R E  
Sbjct: 2   KTDIKETDDEYIVEADLPGFKKEDIKLDYKDG-YLTISAKRDESKDEKDKKGNYIRRERY 60

Query: 105 VGKFSRRFQLPENAMVDRITAHIANSTLTVTVPK 138
            G FSR F LP N   + I A   N  L +T+PK
Sbjct: 61  YGSFSRSFYLP-NVDEEEIKAKYENGVLKITLPK 93

5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic membrane. Length = 93

>gnl|CDD|107247 cd06526, metazoan_ACD, Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps)

 Score = 49.8 bits (120), Expect = 6e-09
 Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 9/78 (11%)

Query: 62  DLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVD 121
           D+ GF   ++KV++ D +++ + G+     EER DE   +     +F+RR+QLPE    D
Sbjct: 14  DVKGFKPEELKVKVSDNKLV-VEGKH----EEREDEHGYVS---REFTRRYQLPEGVDPD 65

Query: 122 RITAHI-ANSTLTVTVPK 138
            +T+ + ++  LT+  PK
Sbjct: 66  SVTSSLSSDGVLTIEAPK 83

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. Length = 83

>gnl|CDD|107227 cd06470, ACD_IbpA-B_like, Alpha-crystallin domain (ACD) found in Escherichia coli inclusion body-associated proteins IbpA and IbpB, and similar proteins

 Score = 44.8 bits (107), Expect = 5e-07
 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 4/70 (5%)

Query: 65  GFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRIT 124
           GF + D+++E+E+   L ++G+K  E+ E  +  HR  +A   F R F L ++  V    
Sbjct: 21  GFSEDDLEIEVENN-QLTVTGKKADEENEEREYLHR-GIAKRAFERSFNLADHVKVKG-- 76

Query: 125 AHIANSTLTV 134
           A + N  LT+
Sbjct: 77  AELENGLLTI 86

IbpA and IbpB are 16 kDa small heat shock proteins (sHsps). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. IbpA and IbpB are produced during high-level production of various heterologous proteins, specifically human prorenin, renin and bovine insulin-like growth factor 2 (bIGF-2), and are strongly associated with inclusion bodies containing these heterologous proteins. IbpA and IbpB work as an integrated system to stabilize thermally aggregated proteins in a disaggregation competent state. The chaperone activity of IbpB is also significantly elevated as the temperature increases from normal to heat shock. The high temperature results in the disassociation of 2-3-MDa IbpB oligomers into smaller approximately 600-kDa structures. This elevated activity seen under heat shock conditions is retained for an extended period of time after the temperature is returned to normal. IbpA also forms multimers. Length = 90

>gnl|CDD|225191 COG2309, AmpS, Leucyl aminopeptidase (aminopeptidase T) [Amino acid transport and metabolism]

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 14/75 (18%)

Query: 65  GFHKHDVKVEIEDGRVLCISGEKK---IEKEERTDEG-HRL-EVAVGKFS---RRFQ--- 113
           G     +++  EDG+V+ IS EK    +++   TDEG  RL E+A+G  S   R F    
Sbjct: 253 GTLIEGIRLTFEDGKVVEISAEKGEEVLKRLLDTDEGARRLGELALGPNSPIARLFYNIL 312

Query: 114 LPENAMVDRITAHIA 128
             E A     T HIA
Sbjct: 313 FDEKASG---TVHIA 324

Length = 385

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	156
PRK11597	142	heat shock chaperone IbpB; Provisional	99.96
PRK10743	137	heat shock protein IbpA; Provisional	99.96
COG0071	146	IbpA Molecular chaperone (small heat shock protein	99.95
cd06472	92	ACD_ScHsp26_like Alpha crystallin domain (ACD) fou	99.95
PF00011	102	HSP20: Hsp20/alpha crystallin family This prints e	99.93
cd06471	93	ACD_LpsHSP_like Group of bacterial proteins contai	99.92
cd06470	90	ACD_IbpA-B_like Alpha-crystallin domain (ACD) foun	99.92
cd06497	86	ACD_alphaA-crystallin_HspB4 Alpha-crystallin domai	99.9
cd06478	83	ACD_HspB4-5-6 Alpha-crystallin domain found in alp	99.89
cd06498	84	ACD_alphaB-crystallin_HspB5 Alpha-crystallin domai	99.89
cd06479	81	ACD_HspB7_like Alpha crystallin domain (ACD) found	99.88
cd06481	87	ACD_HspB9_like Alpha crystallin domain (ACD) found	99.87
cd06475	86	ACD_HspB1_like Alpha crystallin domain (ACD) found	99.87
cd06476	83	ACD_HspB2_like Alpha crystallin domain (ACD) found	99.87
cd06464	88	ACD_sHsps-like Alpha-crystallin domain (ACD) of al	99.86
cd06482	87	ACD_HspB10 Alpha crystallin domain (ACD) found in	99.85
cd06477	83	ACD_HspB3_Like Alpha crystallin domain (ACD) found	99.85
cd06526	83	metazoan_ACD Alpha-crystallin domain (ACD) of meta	99.83
KOG0710	196	consensus Molecular chaperone (small heat-shock pr	99.77
cd06480	91	ACD_HspB8_like Alpha-crystallin domain (ACD) found	99.76
KOG3591	173	consensus Alpha crystallins [Posttranslational mod	99.71
cd00298	80	ACD_sHsps_p23-like This domain family includes the	99.58
cd06469	78	p23_DYX1C1_like p23_like domain found in proteins	99.35
cd06463	84	p23_like Proteins containing this p23_like domain	99.04
PF05455	177	GvpH: GvpH; InterPro: IPR008633 This family consis	99.04
cd06466	84	p23_CS_SGT1_like p23_like domain similar to the C-	98.82
PF04969	79	CS: CS domain; InterPro: IPR017447 The function of	98.61
cd06465	108	p23_hB-ind1_like p23_like domain found in human (h	98.29
cd06489	84	p23_CS_hSgt1_like p23_like domain similar to the C	98.2
PF08190	328	PIH1: pre-RNA processing PIH1/Nop17	98.1
cd06488	87	p23_melusin_like p23_like domain similar to the C-	98.02
cd06468	92	p23_CacyBP p23_like domain found in proteins simil	97.94
cd06467	85	p23_NUDC_like p23_like domain of NUD (nuclear dist	97.92
cd06493	85	p23_NUDCD1_like p23_NUDCD1: p23-like NUD (nuclear	97.78
cd00237	106	p23 p23 binds heat shock protein (Hsp)90 and parti	97.58
cd06494	93	p23_NUDCD2_like p23-like NUD (nuclear distribution	97.33
PLN03088	356	SGT1, suppressor of G2 allele of SKP1; Provisional	97.1
KOG1309	196	consensus Suppressor of G2 allele of skp1 [Signal	96.89
cd06490	87	p23_NCB5OR p23_like domain found in NAD(P)H cytoch	96.68
cd06492	87	p23_mNUDC_like p23-like NUD (nuclear distribution)	96.0
cd06495	102	p23_NUDCD3_like p23-like NUD (nuclear distribution	94.76
PF13349	166	DUF4097: Domain of unknown function (DUF4097)	88.41
KOG3158	180	consensus HSP90 co-chaperone p23 [Posttranslationa	88.39
KOG1667	320	consensus Zn2+-binding protein Melusin/RAR1, conta	85.15
cd06482	87	ACD_HspB10 Alpha crystallin domain (ACD) found in	85.12
PF14913	194	DPCD: DPCD protein family	81.47
COG5091	368	SGT1 Suppressor of G2 allele of skp1 and related p	80.17

>PRK11597 heat shock chaperone IbpB; Provisional

Probab=99.96  E-value=8.2e-28  Score=174.52  Aligned_cols=106  Identities=19%  Similarity=0.254  Sum_probs=91.8

Q ss_pred             CCCccceEEe-CCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccC
Q 031640           43 MIPTRIDWHD-TPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVD  121 (156)
Q Consensus        43 ~~~p~~di~e-~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~  121 (156)
                      ...|++||.| ++++|+|+++|||++++||+|++++ +.|+|+|+++.+  .++..|+++|+++|+|+|+|.||++||.+
T Consensus        30 ~~~P~vdI~e~~~~~y~v~adlPGv~kedi~V~v~~-~~LtI~ge~~~~--~~~~~~~~~Er~~g~F~R~f~LP~~vd~~  106 (142)
T PRK11597         30 QSFPPYNIEKSDDNHYRITLALAGFRQEDLDIQLEG-TRLTVKGTPEQP--EKEVKWLHQGLVNQPFSLSFTLAENMEVS  106 (142)
T ss_pred             CCCCcEEEEEcCCCEEEEEEEeCCCCHHHeEEEEEC-CEEEEEEEEccc--cCCCcEEEEEEeCcEEEEEEECCCCcccC
Confidence            3458899998 4779999999999999999999997 699999997643  35678999999999999999999999998


Q ss_pred             ceEEEEeCCEEEEEEeccCCCCCCCCceEEEeee
Q 031640          122 RITAHIANSTLTVTVPKKDIKKHHGHSRSIKITG  155 (156)
Q Consensus       122 ~i~A~~~~GvL~I~~pK~~~~~~~~~~~~I~I~~  155 (156)
                        +|+|+||||+|+|||..+...  +.++|+|+-
T Consensus       107 --~A~~~nGVL~I~lPK~~~~~~--~~rkI~I~~  136 (142)
T PRK11597        107 --GATFVNGLLHIDLIRNEPEAI--APQRIAISE  136 (142)
T ss_pred             --cCEEcCCEEEEEEeccCcccc--CCcEEEECC
Confidence              699999999999999754433  458999863

>PRK10743 heat shock protein IbpA; Provisional

Probab=99.96  E-value=6.5e-28  Score=174.35  Aligned_cols=102  Identities=21%  Similarity=0.315  Sum_probs=90.2

Q ss_pred             ccceEEe-CCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceE
Q 031640           46 TRIDWHD-TPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRIT  124 (156)
Q Consensus        46 p~~di~e-~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~  124 (156)
                      |++||.+ ++++|.|+++|||++++||+|++++ +.|+|+|+++.+.  ++.+++++|+++|+|.|+|.||.+|+.+  +
T Consensus        35 p~~di~ee~~~~~~v~aelPGv~kedi~V~v~~-~~LtI~ge~~~~~--~~~~~~~~Er~~g~F~R~~~LP~~Vd~~--~  109 (137)
T PRK10743         35 PPYNVELVDENHYRIAIAVAGFAESELEITAQD-NLLVVKGAHADEQ--KERTYLYQGIAERNFERKFQLAENIHVR--G  109 (137)
T ss_pred             CcEEEEEcCCCEEEEEEECCCCCHHHeEEEEEC-CEEEEEEEECccc--cCCcEEEEEEECCEEEEEEECCCCcccC--c
Confidence            8899994 8999999999999999999999998 5999999976543  4567999999999999999999999998  4


Q ss_pred             EEEeCCEEEEEEeccCCCCCCCCceEEEee
Q 031640          125 AHIANSTLTVTVPKKDIKKHHGHSRSIKIT  154 (156)
Q Consensus       125 A~~~~GvL~I~~pK~~~~~~~~~~~~I~I~  154 (156)
                      |+|+||||+|++||..+...  +.++|+|+
T Consensus       110 A~~~dGVL~I~lPK~~~~~~--~~r~I~I~  137 (137)
T PRK10743        110 ANLVNGLLYIDLERVIPEAK--KPRRIEIN  137 (137)
T ss_pred             CEEeCCEEEEEEeCCCcccc--CCeEEeeC
Confidence            99999999999999754443  55999985

>COG0071 IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]

Probab=99.95  E-value=2.5e-27  Score=173.15  Aligned_cols=108  Identities=33%  Similarity=0.505  Sum_probs=100.2

Q ss_pred             CCccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCce
Q 031640           44 IPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRI  123 (156)
Q Consensus        44 ~~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i  123 (156)
                      ..|++||+++++.|+|.++|||++++||+|++++ +.|+|+|++..+...+...++++|+.+|+|.|+|.||..|+.+.+
T Consensus        39 ~~P~vdi~e~~~~~~I~~elPG~~kedI~I~~~~-~~l~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~Lp~~v~~~~~  117 (146)
T COG0071          39 GTPPVDIEETDDEYRITAELPGVDKEDIEITVEG-NTLTIRGEREEEEEEEEEGYLRRERAYGEFERTFRLPEKVDPEVI  117 (146)
T ss_pred             CCCcEEEEEcCCEEEEEEEcCCCChHHeEEEEEC-CEEEEEEEecccccccCCceEEEEEEeeeEEEEEECcccccccce
Confidence            6799999999999999999999999999999998 599999999987777788999999999999999999999999999


Q ss_pred             EEEEeCCEEEEEEeccCCCCCCCCceEEEee
Q 031640          124 TAHIANSTLTVTVPKKDIKKHHGHSRSIKIT  154 (156)
Q Consensus       124 ~A~~~~GvL~I~~pK~~~~~~~~~~~~I~I~  154 (156)
                      +|+|+||+|+|+|||.++.+.  +.+.|+|+
T Consensus       118 ~A~~~nGvL~I~lpk~~~~~~--~~~~i~I~  146 (146)
T COG0071         118 KAKYKNGLLTVTLPKAEPEEK--KPKRIEIE  146 (146)
T ss_pred             eeEeeCcEEEEEEeccccccc--cCceeecC
Confidence            999999999999999998754  55888874

>cd06472 ACD_ScHsp26_like Alpha crystallin domain (ACD) found in Saccharomyces cerevisiae (Sc) small heat shock protein (Hsp)26 and similar proteins

Probab=99.95  E-value=1.1e-26  Score=157.32  Aligned_cols=92  Identities=61%  Similarity=0.996  Sum_probs=85.7

Q ss_pred             cceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEE
Q 031640           47 RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAH  126 (156)
Q Consensus        47 ~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~  126 (156)
                      ++||.|++++|.|.++|||++++||+|++.+++.|+|+|++..+...++..++++|+.+|+|.|+|.||..++.++|+|+
T Consensus         1 ~~dv~E~~~~~~i~~~lPGv~~edi~i~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~v~~~~i~A~   80 (92)
T cd06472           1 RVDWKETPEAHVFKADVPGVKKEDVKVEVEDGRVLRISGERKKEEEKKGDDWHRVERSSGRFVRRFRLPENADADEVKAF   80 (92)
T ss_pred             CccEEEcCCeEEEEEECCCCChHhEEEEEeCCCEEEEEEEecccccccCCCEEEEEEeccEEEEEEECCCCCCHHHCEEE
Confidence            47999999999999999999999999999864589999998876666678899999999999999999999999999999


Q ss_pred             EeCCEEEEEEec
Q 031640          127 IANSTLTVTVPK  138 (156)
Q Consensus       127 ~~~GvL~I~~pK  138 (156)
                      |+||+|+|++||
T Consensus        81 ~~nGvL~I~lPK   92 (92)
T cd06472          81 LENGVLTVTVPK   92 (92)
T ss_pred             EECCEEEEEecC
Confidence            999999999997

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. ScHsp26 is temperature-regulated, it switches from an inactive to a chaperone-active form upon elevation in temperature. It associates into large 24-mers storage forms which upon heat shock disassociate into dimers. These dimers initiate the interaction with non-native substrate proteins and re-assemble into large globular assemblies having one monomer of substrate bound per dimer. This group also contains Arabidopsis thaliana (Ath) Hsp15.7, a peroxisomal matrix protein which can complement the morphological phenotype of S. cerevisiae mutants deficient in Hsps26. AthHsp15.7 is minimally expressed under normal conditions and is strongly induced by heat and oxidative st

>PF00011 HSP20: Hsp20/alpha crystallin family This prints entry is a subset of the Pfam entry

Probab=99.93  E-value=1.8e-24  Score=148.55  Aligned_cols=102  Identities=37%  Similarity=0.623  Sum_probs=83.4

Q ss_pred             eEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEe
Q 031640           49 DWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIA  128 (156)
Q Consensus        49 di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~  128 (156)
                      ||.+++++|.|.++|||+++++|+|++++ +.|+|+|++.  ....+..++..|+..++|.|+|.||+++|.++|+|.|+
T Consensus         1 di~e~~~~~~i~~~lpG~~~edi~I~~~~-~~L~I~g~~~--~~~~~~~~~~~~~~~~~f~r~~~lP~~vd~~~i~a~~~   77 (102)
T PF00011_consen    1 DIKEDEDEYIIKVDLPGFDKEDIKIKVDD-NKLVISGKRK--EEEEDDRYYRSERRYGSFERSIRLPEDVDPDKIKASYE   77 (102)
T ss_dssp             EEEESSSEEEEEEE-TTS-GGGEEEEEET-TEEEEEEEEE--GEECTTCEEEE-S-SEEEEEEEE-STTB-GGG-EEEET
T ss_pred             CeEECCCEEEEEEECCCCChHHEEEEEec-Cccceeceee--eeeeeeeeeecccccceEEEEEcCCCcCCcceEEEEec
Confidence            78999999999999999999999999998 4999999999  33445677888999999999999999999999999999


Q ss_pred             CCEEEEEEeccCCCCCCCCceEEEee
Q 031640          129 NSTLTVTVPKKDIKKHHGHSRSIKIT  154 (156)
Q Consensus       129 ~GvL~I~~pK~~~~~~~~~~~~I~I~  154 (156)
                      ||+|+|++||....+. ...++|+|+
T Consensus        78 ~GvL~I~~pk~~~~~~-~~~~~I~I~  102 (102)
T PF00011_consen   78 NGVLTITIPKKEEEED-SQPKRIPIK  102 (102)
T ss_dssp             TSEEEEEEEBSSSCTT-SSSCEE-ET
T ss_pred             CCEEEEEEEccccccC-CCCeEEEeC
Confidence            9999999999887642 256999985

; InterPro: IPR002068 Prokaryotic and eukaryotic organisms respond to heat shock or other environmental stress by inducing the synthesis of proteins collectively known as heat-shock proteins (hsp) []. Amongst them is a family of proteins with an average molecular weight of 20 Kd, known as the hsp20 proteins []. These seem to act as chaperones that can protect other proteins against heat-induced denaturation and aggregation. Hsp20 proteins seem to form large heterooligomeric aggregates. Structurally, this family is characterised by the presence of a conserved C-terminal domain of about 100 residues.; PDB: 2BOL_B 3N3E_B 2H50_P 2H53_F 2BYU_L 1GME_D 3VQM_J 3VQK_E 3VQL_A 3AAC_A ....

>cd06471 ACD_LpsHSP_like Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18

Probab=99.92  E-value=1.4e-24  Score=147.13  Aligned_cols=90  Identities=36%  Similarity=0.561  Sum_probs=82.2

Q ss_pred             cceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccc--cCCccEEEEeeeeeeEEEEEECCCCcccCceE
Q 031640           47 RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKE--ERTDEGHRLEVAVGKFSRRFQLPENAMVDRIT  124 (156)
Q Consensus        47 ~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~--~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~  124 (156)
                      ++||.|+++.|+|.++|||+++++|+|++++ +.|+|+|+++...+  +.+..++++|+.+|+|.|+|.|| +++.++|+
T Consensus         2 ~~di~e~~~~~~i~~~lPGv~~edi~v~~~~-~~L~I~g~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lp-~v~~~~i~   79 (93)
T cd06471           2 KTDIKETDDEYIVEADLPGFKKEDIKLDYKD-GYLTISAKRDESKDEKDKKGNYIRRERYYGSFSRSFYLP-NVDEEEIK   79 (93)
T ss_pred             ceeEEEcCCEEEEEEECCCCCHHHeEEEEEC-CEEEEEEEEccccccccccCCEEEEeeeccEEEEEEECC-CCCHHHCE
Confidence            6899999999999999999999999999997 59999999986533  23457999999999999999999 79999999


Q ss_pred             EEEeCCEEEEEEec
Q 031640          125 AHIANSTLTVTVPK  138 (156)
Q Consensus       125 A~~~~GvL~I~~pK  138 (156)
                      |+|+||+|+|++||
T Consensus        80 A~~~dGvL~I~lPK   93 (93)
T cd06471          80 AKYENGVLKITLPK   93 (93)
T ss_pred             EEEECCEEEEEEcC
Confidence            99999999999998

5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic me

>cd06470 ACD_IbpA-B_like Alpha-crystallin domain (ACD) found in Escherichia coli inclusion body-associated proteins IbpA and IbpB, and similar proteins

Probab=99.92  E-value=4.6e-24  Score=144.06  Aligned_cols=89  Identities=24%  Similarity=0.393  Sum_probs=81.4

Q ss_pred             ccceEEeCC-CeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceE
Q 031640           46 TRIDWHDTP-ECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRIT  124 (156)
Q Consensus        46 p~~di~e~~-~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~  124 (156)
                      |+++|.+++ +.|.|.++|||+++++|+|++++ +.|+|+|+++.... ++.+|+++|+.+|+|.|+|.||.+++..  +
T Consensus         1 p~~di~e~~~~~~~v~~~lPG~~kedi~v~~~~-~~L~I~g~~~~~~~-~~~~~~~~e~~~g~f~R~~~LP~~vd~~--~   76 (90)
T cd06470           1 PPYNIEKTGENNYRITLAVAGFSEDDLEIEVEN-NQLTVTGKKADEEN-EEREYLHRGIAKRAFERSFNLADHVKVK--G   76 (90)
T ss_pred             CCeeeEEcCCCeEEEEEECCCCCHHHeEEEEEC-CEEEEEEEEccccc-CCCcEEEEEEeceEEEEEEECCCCceEC--e
Confidence            578999975 89999999999999999999997 59999999988765 5678999999999999999999999874  8


Q ss_pred             EEEeCCEEEEEEec
Q 031640          125 AHIANSTLTVTVPK  138 (156)
Q Consensus       125 A~~~~GvL~I~~pK  138 (156)
                      |+|+||+|+|+||+
T Consensus        77 A~~~~GvL~I~l~~   90 (90)
T cd06470          77 AELENGLLTIDLER   90 (90)
T ss_pred             eEEeCCEEEEEEEC
Confidence            99999999999985

IbpA and IbpB are 16 kDa small heat shock proteins (sHsps). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. IbpA and IbpB are produced during high-level production of various heterologous proteins, specifically human prorenin, renin and bovine insulin-like growth factor 2 (bIGF-2), and are strongly associated with inclusion bodies containing these heterologous proteins. IbpA and IbpB work as an integrated system to stabilize thermally aggregated proteins in a disaggregation competent state. The chaperone activity of IbpB is also significantly elevated as the temperature increases from normal to heat shock. The high temperature results in the disassociation of 2-3-MDa IbpB oligomers into smaller approximately 6

>cd06497 ACD_alphaA-crystallin_HspB4 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaA-crystallin (HspB4, 20kDa)

Probab=99.90  E-value=4.1e-23  Score=138.35  Aligned_cols=82  Identities=26%  Similarity=0.377  Sum_probs=72.8

Q ss_pred             eEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEE-
Q 031640           49 DWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHI-  127 (156)
Q Consensus        49 di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~-  127 (156)
                      +|.+++++|.|.++|||+++++|+|++.+ +.|+|+|++....  ++..|.++|     |.|+|.||++||.++|+|+| 
T Consensus         4 ~v~e~~~~~~v~~dlpG~~~edi~V~v~~-~~L~I~g~~~~~~--~~~~~~~~e-----f~R~~~LP~~Vd~~~i~A~~~   75 (86)
T cd06497           4 EVRSDRDKFTIYLDVKHFSPEDLTVKVLD-DYVEIHGKHSERQ--DDHGYISRE-----FHRRYRLPSNVDQSAITCSLS   75 (86)
T ss_pred             eEEEcCCEEEEEEECCCCCHHHeEEEEEC-CEEEEEEEEccee--CCCCEEEEE-----EEEEEECCCCCChHHeEEEeC
Confidence            78999999999999999999999999997 5999999875443  234565544     99999999999999999999 


Q ss_pred             eCCEEEEEEec
Q 031640          128 ANSTLTVTVPK  138 (156)
Q Consensus       128 ~~GvL~I~~pK  138 (156)
                      +||+|+|++||
T Consensus        76 ~dGvL~I~~PK   86 (86)
T cd06497          76 ADGMLTFSGPK   86 (86)
T ss_pred             CCCEEEEEecC
Confidence            89999999998

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 does not belong to this group. Mutations inHspB4 have been associated with Autosomal Dominant Congenital Cataract (ADCC). The chaperone-like functions of HspB4 are considered important for maintaining lens transparency and preventing cataract.

>cd06478 ACD_HspB4-5-6 Alpha-crystallin domain found in alphaA-crystallin (HspB4), alphaB-crystallin (HspB5), and the small heat shock protein (sHsp) HspB6, also known as Hsp20

Probab=99.89  E-value=1.9e-22  Score=134.26  Aligned_cols=82  Identities=20%  Similarity=0.340  Sum_probs=71.5

Q ss_pred             eEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEE-
Q 031640           49 DWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHI-  127 (156)
Q Consensus        49 di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~-  127 (156)
                      +|.+++++|.|.++|||+++++|+|++.+ +.|+|+|++..+..  ...++++     .|.|+|.||.+||.++|+|+| 
T Consensus         1 ~~~~~~~~~~v~~dlpG~~~edI~V~v~~-~~L~I~g~~~~~~~--~~~~~~~-----ef~R~~~LP~~vd~~~i~A~~~   72 (83)
T cd06478           1 EVRLDKDRFSVNLDVKHFSPEELSVKVLG-DFVEIHGKHEERQD--EHGFISR-----EFHRRYRLPPGVDPAAITSSLS   72 (83)
T ss_pred             CeeecCceEEEEEECCCCCHHHeEEEEEC-CEEEEEEEEceEcC--CCCEEEE-----EEEEEEECCCCcChHHeEEEEC
Confidence            47789999999999999999999999997 59999998764332  3345554     499999999999999999999 


Q ss_pred             eCCEEEEEEec
Q 031640          128 ANSTLTVTVPK  138 (156)
Q Consensus       128 ~~GvL~I~~pK  138 (156)
                      +||+|+|++||
T Consensus        73 ~dGvL~I~~PK   83 (83)
T cd06478          73 ADGVLTISGPR   83 (83)
T ss_pred             CCCEEEEEecC
Confidence            79999999997

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 on the other hand is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. HspB5's functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its ol

>cd06498 ACD_alphaB-crystallin_HspB5 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaB-crystallin (HspB5, 20kDa)

Probab=99.89  E-value=2.6e-22  Score=133.90  Aligned_cols=82  Identities=20%  Similarity=0.335  Sum_probs=71.3

Q ss_pred             EEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEe-
Q 031640           50 WHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIA-  128 (156)
Q Consensus        50 i~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~-  128 (156)
                      +.+++++|.|.++|||++++||+|++.+ +.|+|+|++..+.+  ...++++     .|.|+|.||.+||.++|+|+|+ 
T Consensus         2 ~~~~~~~~~v~~dlpG~~~edi~V~v~~-~~L~I~g~~~~~~~--~~~~~~~-----eF~R~~~LP~~vd~~~i~A~~~~   73 (84)
T cd06498           2 MRLEKDKFSVNLDVKHFSPEELKVKVLG-DFIEIHGKHEERQD--EHGFISR-----EFQRKYRIPADVDPLTITSSLSP   73 (84)
T ss_pred             eEeCCceEEEEEECCCCCHHHeEEEEEC-CEEEEEEEEcceeC--CCCEEEE-----EEEEEEECCCCCChHHcEEEeCC
Confidence            6778999999999999999999999997 69999998765432  3445543     5999999999999999999995 


Q ss_pred             CCEEEEEEecc
Q 031640          129 NSTLTVTVPKK  139 (156)
Q Consensus       129 ~GvL~I~~pK~  139 (156)
                      ||+|+|++||+
T Consensus        74 dGvL~I~lPk~   84 (84)
T cd06498          74 DGVLTVCGPRK   84 (84)
T ss_pred             CCEEEEEEeCC
Confidence            99999999985

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. HspB4 does not belong to this group. HspB5 shows increased synthesis in response to stress. HspB5 is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. Its functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its oligomerization and anti-apoptotic activ

>cd06479 ACD_HspB7_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB7, also known as cardiovascular small heat shock protein (cvHsp), and similar proteins

Probab=99.88  E-value=2.8e-22  Score=132.74  Aligned_cols=79  Identities=20%  Similarity=0.376  Sum_probs=71.3

Q ss_pred             eEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEE-
Q 031640           49 DWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHI-  127 (156)
Q Consensus        49 di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~-  127 (156)
                      +|.|++++|.|.++|||++++||+|++++ +.|+|+|+++.+.    +      ..+|+|.|+|.||.+||.++|+|+| 
T Consensus         2 ~v~e~~~~~~v~~dlpG~~pedi~V~v~~-~~L~I~ger~~~~----~------~~~g~F~R~~~LP~~vd~e~v~A~l~   70 (81)
T cd06479           2 NVKTLGDTYQFAVDVSDFSPEDIIVTTSN-NQIEVHAEKLASD----G------TVMNTFTHKCQLPEDVDPTSVSSSLG   70 (81)
T ss_pred             CccCcCCeEEEEEECCCCCHHHeEEEEEC-CEEEEEEEEeccC----C------CEEEEEEEEEECCCCcCHHHeEEEec
Confidence            68899999999999999999999999997 6999999986432    1      2478999999999999999999997 


Q ss_pred             eCCEEEEEEec
Q 031640          128 ANSTLTVTVPK  138 (156)
Q Consensus       128 ~~GvL~I~~pK  138 (156)
                      +||+|+|++++
T Consensus        71 ~~GvL~I~~~~   81 (81)
T cd06479          71 EDGTLTIKARR   81 (81)
T ss_pred             CCCEEEEEecC
Confidence            99999999985

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB7 is a 25-kDa protein, preferentially expressed in heart and skeletal muscle. It binds the cytoskeleton protein alpha-filamin (also known as actin-binding protein 280). The expression of HspB7 is increased during rat muscle aging. Its expression is also modulated in obesity implicating this protein in this and related metabolic disorders. As the human gene encoding HspB7 is mapped to chromosome 1p36.23-p34.3 it is a positional candidate for several dystrophies and myopathies.

>cd06481 ACD_HspB9_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB9 and similar proteins

Probab=99.87  E-value=9.2e-22  Score=132.08  Aligned_cols=83  Identities=25%  Similarity=0.477  Sum_probs=72.9

Q ss_pred             eCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEE-eCC
Q 031640           52 DTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHI-ANS  130 (156)
Q Consensus        52 e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~-~~G  130 (156)
                      +.++.|.|.++||||+++||+|++++ +.|+|+|++..+.......+.   +.+|+|.|+|.||++||.+.|+|.| +||
T Consensus         4 ~~~d~~~v~~dlpG~~~edI~V~v~~-~~L~I~g~~~~~~~~~~~~~~---~~~~~F~R~~~LP~~Vd~~~i~A~~~~dG   79 (87)
T cd06481           4 DGKEGFSLKLDVRGFSPEDLSVRVDG-RKLVVTGKREKKNEDEKGSFS---YEYQEFVREAQLPEHVDPEAVTCSLSPSG   79 (87)
T ss_pred             CccceEEEEEECCCCChHHeEEEEEC-CEEEEEEEEeeecccCCCcEE---EEeeEEEEEEECCCCcChHHeEEEeCCCc
Confidence            45779999999999999999999997 699999998766554445554   3489999999999999999999999 999


Q ss_pred             EEEEEEec
Q 031640          131 TLTVTVPK  138 (156)
Q Consensus       131 vL~I~~pK  138 (156)
                      +|+|++|+
T Consensus        80 vL~I~~P~   87 (87)
T cd06481          80 HLHIRAPR   87 (87)
T ss_pred             eEEEEcCC
Confidence            99999995

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB9 is expressed exclusively in the normal testis and in various tumor samples and is a cancer/testis antigen. hHspB9 interacts with TCTEL1 (T-complex testis expressed protein -1), a subunit of dynein. hHspB9 and TCTEL1 are co-expressed in similar cells within the testis and in tumor cells. Included in this group is Xenopus Hsp30, a developmentally-regulated heat-inducible molecular chaperone.

>cd06475 ACD_HspB1_like Alpha crystallin domain (ACD) found in mammalian small (s)heat shock protein (Hsp)-27 (also denoted HspB1 in human) and similar proteins

Probab=99.87  E-value=1.3e-21  Score=131.09  Aligned_cols=82  Identities=21%  Similarity=0.362  Sum_probs=71.9

Q ss_pred             ceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEE
Q 031640           48 IDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHI  127 (156)
Q Consensus        48 ~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~  127 (156)
                      .+|+|++++|.|.++|||+++++|+|++.+ +.|+|+|+++.+..  ...+.     .++|+|+|.||.+||.++|+|+|
T Consensus         3 ~~i~e~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~~--~~~~~-----~~~f~R~f~LP~~vd~~~v~A~~   74 (86)
T cd06475           3 SEIRQTADRWKVSLDVNHFAPEELVVKTKD-GVVEITGKHEEKQD--EHGFV-----SRCFTRKYTLPPGVDPTAVTSSL   74 (86)
T ss_pred             ceEEEcCCeEEEEEECCCCCHHHEEEEEEC-CEEEEEEEECcCcC--CCCEE-----EEEEEEEEECCCCCCHHHcEEEE
Confidence            589999999999999999999999999997 59999999865332  22232     45899999999999999999999


Q ss_pred             e-CCEEEEEEe
Q 031640          128 A-NSTLTVTVP  137 (156)
Q Consensus       128 ~-~GvL~I~~p  137 (156)
                      . ||+|+|++|
T Consensus        75 ~~dGvL~I~lP   85 (86)
T cd06475          75 SPDGILTVEAP   85 (86)
T ss_pred             CCCCeEEEEec
Confidence            6 999999998

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Hsp27 shows enhanced synthesis in response to stress. It is a molecular chaperone which interacts with a large number of different proteins. It is found in many types of human cells including breast, uterus, cervix, platelets and cancer cells. Hsp27 has diverse cellular functions including, chaperoning, regulation of actin polymerization, keratinocyte differentiation, regulation of inflammatory pathways in keratinocytes, and protection from oxidative stress through modulating glutathione levels. It is also a subunit of AUF1-containing protein complexes. It has been linked to several transduction pathways regulating cellular functions including differentiat

>cd06476 ACD_HspB2_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB2/heat shock 27kDa protein 2 and similar proteins

Probab=99.87  E-value=2e-21  Score=129.36  Aligned_cols=81  Identities=16%  Similarity=0.230  Sum_probs=69.1

Q ss_pred             EEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEe-
Q 031640           50 WHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIA-  128 (156)
Q Consensus        50 i~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~-  128 (156)
                      +..++++|.|.++|||++++||+|++.+ +.|+|+|++....  +...+.     .+.|+|+|.||.+||.++|+|+|. 
T Consensus         2 ~~~~~d~y~v~~dlpG~~~edi~V~v~~-~~L~I~g~~~~~~--~~~~~~-----~~eF~R~~~LP~~vd~~~v~A~~~~   73 (83)
T cd06476           2 VESEDDKYQVFLDVCHFTPDEITVRTVD-NLLEVSARHPQRM--DRHGFV-----SREFTRTYILPMDVDPLLVRASLSH   73 (83)
T ss_pred             eeccCCeEEEEEEcCCCCHHHeEEEEEC-CEEEEEEEEccee--cCCCEE-----EEEEEEEEECCCCCChhhEEEEecC
Confidence            4456889999999999999999999998 5999999986433  222343     345999999999999999999995 


Q ss_pred             CCEEEEEEec
Q 031640          129 NSTLTVTVPK  138 (156)
Q Consensus       129 ~GvL~I~~pK  138 (156)
                      ||+|+|++||
T Consensus        74 dGvL~I~~Pr   83 (83)
T cd06476          74 DGILCIQAPR   83 (83)
T ss_pred             CCEEEEEecC
Confidence            9999999997

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB2 is preferentially and constitutively expressed in skeletal muscle and heart. HspB2 shows homooligomeric activity and forms aggregates in muscle cytosol. Although its expression is not induced by heat shock, it redistributes to the insoluble fraction in response to heat shock. In the mouse heart, HspB2 plays a role in maintaining energetic balance, by protecting cardiac energetics during ischemia/reperfusion, and allowing for increased work during acute inotropic challenge. hHspB2 [previously also known as myotonic dystrophy protein kinase (DMPK) binding protein (MKBP)] is selectively up-regulated in skeletal muscles from myotonic dystrophy patients.

>cd06464 ACD_sHsps-like Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps)

Probab=99.86  E-value=9.1e-21  Score=125.84  Aligned_cols=88  Identities=49%  Similarity=0.722  Sum_probs=80.7

Q ss_pred             eEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEe
Q 031640           49 DWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIA  128 (156)
Q Consensus        49 di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~  128 (156)
                      ++.|+++.|.|.++|||+++++|+|++.+ +.|.|+|++........ .+...++..+.|.|+|.||.+++.+.++|.|+
T Consensus         1 ~i~e~~~~~~i~~~lpg~~~~~i~V~v~~-~~l~I~g~~~~~~~~~~-~~~~~~~~~~~f~r~~~LP~~vd~~~i~a~~~   78 (88)
T cd06464           1 DVYETDDAYVVEADLPGFKKEDIKVEVED-GVLTISGEREEEEEEEE-NYLRRERSYGSFSRSFRLPEDVDPDKIKASLE   78 (88)
T ss_pred             CcEEcCCEEEEEEECCCCCHHHeEEEEEC-CEEEEEEEEecccccCC-cEEEEEEeCcEEEEEEECCCCcCHHHcEEEEe
Confidence            46788999999999999999999999998 59999999997765443 67788999999999999999999999999999


Q ss_pred             CCEEEEEEec
Q 031640          129 NSTLTVTVPK  138 (156)
Q Consensus       129 ~GvL~I~~pK  138 (156)
                      ||+|+|++||
T Consensus        79 ~G~L~I~~pk   88 (88)
T cd06464          79 NGVLTITLPK   88 (88)
T ss_pred             CCEEEEEEcC
Confidence            9999999997

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.

>cd06482 ACD_HspB10 Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB10, also known as sperm outer dense fiber protein (ODFP), and similar proteins

Probab=99.85  E-value=8.3e-21  Score=127.25  Aligned_cols=80  Identities=18%  Similarity=0.277  Sum_probs=69.9

Q ss_pred             CCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEeCC-E
Q 031640           53 TPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANS-T  131 (156)
Q Consensus        53 ~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G-v  131 (156)
                      ++++|+|.++|||++++||+|++.+ +.|+|+|+++.+.+.+.    ..|+.+|+|.|+|.||.+||.++|+|+|+|| +
T Consensus         6 ~~~~~~v~adlPG~~kedI~V~v~~-~~L~I~ger~~~~e~~~----~~er~~g~F~R~f~LP~~Vd~d~i~A~~~~~~~   80 (87)
T cd06482           6 DSSNVLASVDVCGFEPDQVKVKVKD-GKVQVSAERENRYDCLG----SKKYSYMNICKEFSLPPGVDEKDVTYSYGLGSV   80 (87)
T ss_pred             cCCEEEEEEECCCCCHHHeEEEEEC-CEEEEEEEEecccccCC----ccEEEEEEEEEEEECCCCcChHHcEEEEcCCCE
Confidence            4679999999999999999999998 59999999876543322    2478899999999999999999999999776 9


Q ss_pred             EEEEEe
Q 031640          132 LTVTVP  137 (156)
Q Consensus       132 L~I~~p  137 (156)
                      |+|.-|
T Consensus        81 l~i~~~   86 (87)
T cd06482          81 VKIETP   86 (87)
T ss_pred             EEEeeC
Confidence            999876

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB10 occurs exclusively in the axoneme of sperm cells and may have a cytoskeletal role.

>cd06477 ACD_HspB3_Like Alpha crystallin domain (ACD) found in mammalian HspB3, also known as heat-shock protein 27-like protein (HSPL27, 17-kDa) and similar proteins

Probab=99.85  E-value=1.3e-20  Score=125.24  Aligned_cols=79  Identities=18%  Similarity=0.321  Sum_probs=68.4

Q ss_pred             EeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEE-eC
Q 031640           51 HDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHI-AN  129 (156)
Q Consensus        51 ~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~-~~  129 (156)
                      .|++++|.|+++|||++++||+|++.+ +.|+|+|++..+..  ..++.     .++|+|+|.||.+|+.++|+|+| +|
T Consensus         3 ~e~~~~~~v~~dlpG~~~edI~V~v~~-~~L~I~ge~~~~~~--~~~~~-----~r~F~R~~~LP~~Vd~~~v~A~~~~d   74 (83)
T cd06477           3 EEGKPMFQILLDVVQFRPEDIIIQVFE-GWLLIKGQHGVRMD--EHGFI-----SRSFTRQYQLPDGVEHKDLSAMLCHD   74 (83)
T ss_pred             ccCCceEEEEEEcCCCCHHHeEEEEEC-CEEEEEEEEccccC--CCCEE-----EEEEEEEEECCCCcchheEEEEEcCC
Confidence            467889999999999999999999998 59999999876542  23332     34899999999999999999998 89


Q ss_pred             CEEEEEEe
Q 031640          130 STLTVTVP  137 (156)
Q Consensus       130 GvL~I~~p  137 (156)
                      |+|+|+.|
T Consensus        75 GvL~I~~~   82 (83)
T cd06477          75 GILVVETK   82 (83)
T ss_pred             CEEEEEec
Confidence            99999976

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB3 is expressed in adult skeletal muscle, smooth muscle, and heart, and in several other fetal tissues. In muscle cells HspB3 forms an oligomeric 150 kDa complex with myotonic dystrophy protein kinase-binding protein (MKBP/ HspB2), this complex may comprise one of two independent muscle-cell specific chaperone systems. The expression of HspB3 is induced during muscle differentiation controlled by the myogenic factor MyoD. HspB3 may also interact with Hsp22 (HspB8).

>cd06526 metazoan_ACD Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps)

Probab=99.83  E-value=2.5e-20  Score=123.87  Aligned_cols=77  Identities=29%  Similarity=0.548  Sum_probs=67.8

Q ss_pred             CCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEeC-CEE
Q 031640           54 PECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIAN-STL  132 (156)
Q Consensus        54 ~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~-GvL  132 (156)
                      +++|.|.++||||++++|+|++++ +.|+|+|+++....  ..     ++.+++|.|+|.||.+||.++++|+|.| |+|
T Consensus         6 ~~~~~v~~dlpG~~~edI~v~v~~-~~L~I~g~~~~~~~--~~-----~~~~~~f~r~~~LP~~vd~~~i~A~~~~~GvL   77 (83)
T cd06526           6 DEKFQVTLDVKGFKPEELKVKVSD-NKLVVEGKHEERED--EH-----GYVSREFTRRYQLPEGVDPDSVTSSLSSDGVL   77 (83)
T ss_pred             CeeEEEEEECCCCCHHHcEEEEEC-CEEEEEEEEeeecc--CC-----CEEEEEEEEEEECCCCCChHHeEEEeCCCcEE
Confidence            359999999999999999999997 69999999876543  11     2346889999999999999999999998 999


Q ss_pred             EEEEec
Q 031640          133 TVTVPK  138 (156)
Q Consensus       133 ~I~~pK  138 (156)
                      +|++||
T Consensus        78 ~I~~Pk   83 (83)
T cd06526          78 TIEAPK   83 (83)
T ss_pred             EEEecC
Confidence            999997

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.

>KOG0710 consensus Molecular chaperone (small heat-shock protein Hsp26/Hsp42) [Posttranslational modification, protein turnover, chaperones]

Probab=99.77  E-value=7.7e-19  Score=134.09  Aligned_cols=112  Identities=48%  Similarity=0.726  Sum_probs=99.2

Q ss_pred             CCCCccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEeccccc--CCccEEEEeeeeeeEEEEEECCCCcc
Q 031640           42 MMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEE--RTDEGHRLEVAVGKFSRRFQLPENAM  119 (156)
Q Consensus        42 ~~~~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~--~~~~~~~~e~~~~~f~r~~~LP~~vd  119 (156)
                      ....++.++.+.++.|.+.+++||+.+++++|.+++++.|.|+|++..+.+.  ....+...|+..|.|.|.+.||++++
T Consensus        81 ~~~~~~~~v~e~~~~~~~~~~~Pgl~ke~iKv~~~~~~~l~isGe~~~e~e~~~~~~~~~~~E~~~g~F~r~~~lPenv~  160 (196)
T KOG0710|consen   81 SEARVPWDVKESPDAHEFKVDLPGLKKEDIKVEVEDEKVLTISGERKKEEEESGSGKKWKRVERKLGKFKRRFELPENVD  160 (196)
T ss_pred             ccccCCcccccCCCceEEEeeCCCCCchhceEEeccCcEEEEecccccccccccCCccceeehhcccceEeeecCCcccc
Confidence            3455677889999999999999999999999999986579999999988664  45678888999999999999999999


Q ss_pred             cCceEEEEeCCEEEEEEeccCC--CCCCCCceEEEeee
Q 031640          120 VDRITAHIANSTLTVTVPKKDI--KKHHGHSRSIKITG  155 (156)
Q Consensus       120 ~~~i~A~~~~GvL~I~~pK~~~--~~~~~~~~~I~I~~  155 (156)
                      .+.|+|.|+||||+|++||...  .+.  ..+.|.|.+
T Consensus       161 ~d~ikA~~~nGVL~VvvpK~~~~~~~~--~v~~i~i~~  196 (196)
T KOG0710|consen  161 VDEIKAEMENGVLTVVVPKLEPLLKKP--KVRQIAISG  196 (196)
T ss_pred             HHHHHHHhhCCeEEEEEecccccccCC--ccceeeccC
Confidence            9999999999999999999888  466  778887764

>cd06480 ACD_HspB8_like Alpha-crystallin domain (ACD) found in mammalian 21

Probab=99.76  E-value=7.4e-18  Score=113.72  Aligned_cols=81  Identities=17%  Similarity=0.304  Sum_probs=70.1

Q ss_pred             EEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEe-
Q 031640           50 WHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIA-  128 (156)
Q Consensus        50 i~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~-  128 (156)
                      +..++++|.|.+++.||+++||+|++.+ +.|+|+|+++.+..+  ..+.     .++|.|+|.||++||.+.|+|.+. 
T Consensus        10 ~~~~~~~f~v~ldv~gF~pEDL~Vkv~~-~~L~V~Gkh~~~~~e--~g~~-----~r~F~R~~~LP~~Vd~~~v~s~l~~   81 (91)
T cd06480          10 PPNSSEPWKVCVNVHSFKPEELTVKTKD-GFVEVSGKHEEQQKE--GGIV-----SKNFTKKIQLPPEVDPVTVFASLSP   81 (91)
T ss_pred             CCCCCCcEEEEEEeCCCCHHHcEEEEEC-CEEEEEEEECcccCC--CCEE-----EEEEEEEEECCCCCCchhEEEEeCC
Confidence            4456889999999999999999999997 699999999876532  2332     478999999999999999999996 


Q ss_pred             CCEEEEEEec
Q 031640          129 NSTLTVTVPK  138 (156)
Q Consensus       129 ~GvL~I~~pK  138 (156)
                      ||+|+|.+|.
T Consensus        82 dGvL~IeaP~   91 (91)
T cd06480          82 EGLLIIEAPQ   91 (91)
T ss_pred             CCeEEEEcCC
Confidence            9999999983

6 KDa small heat shock protein (sHsp) HspB8, also denoted as Hsp22 in humans, and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. A chaperone complex formed of HspB8 and Bag3 stimulates degradation of protein complexes by macroautophagy. HspB8 also forms complexes with Hsp27 (HspB1), MKBP (HspB2), HspB3, alphaB-crystallin (HspB5), Hsp20 (HspB6), and cvHsp (HspB7). These latter interactions may depend on phosphorylation of the respective partner sHsp. HspB8 may participate in the regulation of cell proliferation, cardiac hypertrophy, apoptosis, and carcinogenesis. Point mutations in HspB8 have been correlated with the development of several congenital neurological diseases, including Charcot Marie tooth disease and distal motor neuropathy type II.

>KOG3591 consensus Alpha crystallins [Posttranslational modification, protein turnover, chaperones]

Probab=99.71  E-value=1.9e-16  Score=118.57  Aligned_cols=100  Identities=23%  Similarity=0.391  Sum_probs=86.2

Q ss_pred             ccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEE
Q 031640           46 TRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITA  125 (156)
Q Consensus        46 p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A  125 (156)
                      ...++..++++|.|.+++..|++++|+|++.+ +.|.|+|++++..++ .+ +.     .++|.|.|.||++||++.|++
T Consensus        63 ~~~~~~~~~~~F~V~lDV~~F~PeEl~Vk~~~-~~l~V~gkHeer~d~-~G-~v-----~R~F~R~y~LP~~vdp~~V~S  134 (173)
T KOG3591|consen   63 GASEIVNDKDKFEVNLDVHQFKPEELKVKTDD-NTLEVEGKHEEKEDE-HG-YV-----SRSFVRKYLLPEDVDPTSVTS  134 (173)
T ss_pred             cccccccCCCcEEEEEEcccCcccceEEEeCC-CEEEEEeeeccccCC-CC-eE-----EEEEEEEecCCCCCChhheEE
Confidence            45688889999999999999999999999997 599999999877532 22 22     457999999999999999999


Q ss_pred             EE-eCCEEEEEEeccCCCCCCCCceEEEeee
Q 031640          126 HI-ANSTLTVTVPKKDIKKHHGHSRSIKITG  155 (156)
Q Consensus       126 ~~-~~GvL~I~~pK~~~~~~~~~~~~I~I~~  155 (156)
                      ++ .||+|+|.+||....+.  ..+.|+|+.
T Consensus       135 ~LS~dGvLtI~ap~~~~~~~--~er~ipI~~  163 (173)
T KOG3591|consen  135 TLSSDGVLTIEAPKPPPKQD--NERSIPIEQ  163 (173)
T ss_pred             eeCCCceEEEEccCCCCcCc--cceEEeEee
Confidence            99 99999999999987764  458888874

>cd00298 ACD_sHsps_p23-like This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins

Probab=99.58  E-value=2.3e-14  Score=91.88  Aligned_cols=80  Identities=43%  Similarity=0.715  Sum_probs=70.6

Q ss_pred             EEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEeC
Q 031640           50 WHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIAN  129 (156)
Q Consensus        50 i~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~  129 (156)
                      +.++++.|.|++++||+.+++++|.+.+ +.|.|+|.......        .+...++|.+++.||..++++.++|.+.+
T Consensus         1 ~~q~~~~v~i~i~~~~~~~~~i~v~~~~-~~l~v~~~~~~~~~--------~~~~~~~~~~~~~L~~~i~~~~~~~~~~~   71 (80)
T cd00298           1 WYQTDDEVVVTVDLPGVKKEDIKVEVED-NVLTISGKREEEEE--------RERSYGEFERSFELPEDVDPEKSKASLEN   71 (80)
T ss_pred             CEEcCCEEEEEEECCCCCHHHeEEEEEC-CEEEEEEEEcCCCc--------ceEeeeeEEEEEECCCCcCHHHCEEEEEC
Confidence            3577899999999999999999999998 69999998765433        33456789999999999999999999999


Q ss_pred             CEEEEEEec
Q 031640          130 STLTVTVPK  138 (156)
Q Consensus       130 GvL~I~~pK  138 (156)
                      |+|+|++||
T Consensus        72 ~~l~i~l~K   80 (80)
T cd00298          72 GVLEITLPK   80 (80)
T ss_pred             CEEEEEEcC
Confidence            999999997

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind

>cd06469 p23_DYX1C1_like p23_like domain found in proteins similar to dyslexia susceptibility 1 (DYX1) candidate 1 (C1) protein, DYX1C1

Probab=99.35  E-value=1e-11  Score=80.93  Aligned_cols=71  Identities=23%  Similarity=0.268  Sum_probs=63.8

Q ss_pred             EEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEeC
Q 031640           50 WHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIAN  129 (156)
Q Consensus        50 i~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~  129 (156)
                      +.++++.+.|++.+||+++++++|++++ +.|.|++                    ..|.+++.||..|+++.++|++.+
T Consensus         1 W~Qt~~~v~i~i~~p~v~~~~v~v~~~~-~~l~i~~--------------------~~~~~~~~l~~~I~~e~~~~~~~~   59 (78)
T cd06469           1 WSQTDEDVKISVPLKGVKTSKVDIFCSD-LYLKVNF--------------------PPYLFELDLAAPIDDEKSSAKIGN   59 (78)
T ss_pred             CcccCCEEEEEEEeCCCccccceEEEec-CEEEEcC--------------------CCEEEEEeCcccccccccEEEEeC
Confidence            3578899999999999999999999997 5898886                    137788999999999999999999


Q ss_pred             CEEEEEEeccCC
Q 031640          130 STLTVTVPKKDI  141 (156)
Q Consensus       130 GvL~I~~pK~~~  141 (156)
                      |.|+|+|+|.+.
T Consensus        60 ~~l~i~L~K~~~   71 (78)
T cd06469          60 GVLVFTLVKKEP   71 (78)
T ss_pred             CEEEEEEEeCCC
Confidence            999999999865

The human gene encoding this protein is a positional candidate gene for developmental dyslexia (DD), it is located on 15q21.3 by the DYX1 DD susceptibility locus (15q15-21). Independent association studies have reported conflicting results. However, association of short-term memory, which plays a role in DD, with a variant within the DYX1C1 gene has been reported. Most proteins belonging to this group contain a C-terminal tetratricopeptide repeat (TPR) protein binding region.

>cd06463 p23_like Proteins containing this p23_like domain include p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1

Probab=99.04  E-value=2.9e-09  Score=69.24  Aligned_cols=75  Identities=19%  Similarity=0.137  Sum_probs=65.4

Q ss_pred             EeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEeCC
Q 031640           51 HDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANS  130 (156)
Q Consensus        51 ~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G  130 (156)
                      .++++.+.|.+.+||..++++.|.+.+ +.|.|++....               .+.|...+.|+..|+++..++++++|
T Consensus         2 ~Q~~~~v~i~v~~~~~~~~~~~v~~~~-~~l~i~~~~~~---------------~~~~~~~~~L~~~I~~~~s~~~~~~~   65 (84)
T cd06463           2 YQTLDEVTITIPLKDVTKKDVKVEFTP-KSLTVSVKGGG---------------GKEYLLEGELFGPIDPEESKWTVEDR   65 (84)
T ss_pred             cccccEEEEEEEcCCCCccceEEEEec-CEEEEEeeCCC---------------CCceEEeeEccCccchhhcEEEEeCC
Confidence            467889999999999999999999997 69999986430               13477888999999999999999999


Q ss_pred             EEEEEEeccCC
Q 031640          131 TLTVTVPKKDI  141 (156)
Q Consensus       131 vL~I~~pK~~~  141 (156)
                      .|.|+|+|+.+
T Consensus        66 ~l~i~L~K~~~   76 (84)
T cd06463          66 KIEITLKKKEP   76 (84)
T ss_pred             EEEEEEEECCC
Confidence            99999999876

Both are co-chaperones for the heat shock protein (Hsp) 90. p23 binds Hsp90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis. Both p23 and Sba1p can regulate telomerase activity. This group includes domains similar to the C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1). Sgt1 interacts with multiple protein complexes and has the features of a co-chaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. This group also includes the p23_like domains of

>PF05455 GvpH: GvpH; InterPro: IPR008633 This family consists of archaeal GvpH proteins which are thought to be involved in gas vesicle synthesis []

Probab=99.04  E-value=2.6e-09  Score=79.70  Aligned_cols=81  Identities=22%  Similarity=0.327  Sum_probs=63.6

Q ss_pred             CCCccceEEeCCC-eEEEEEEeCCCCCCC-eEEEEeCC-cEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcc
Q 031640           43 MIPTRIDWHDTPE-CHVFKADLSGFHKHD-VKVEIEDG-RVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAM  119 (156)
Q Consensus        43 ~~~p~~di~e~~~-~y~i~~~lPG~~~ed-i~V~v~~~-~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd  119 (156)
                      ...+.+++.+.++ .++|.++|||+.+++ |+|.++.+ ..|+|+..                   +.+.+++.||.. +
T Consensus        89 ~~~~~vdtre~dDge~~VvAdLPGVs~dd~idV~l~~d~~~L~i~~~-------------------~~~~krv~L~~~-~  148 (177)
T PF05455_consen   89 EESIHVDTRERDDGELVVVADLPGVSDDDAIDVTLDDDEGALTIRVG-------------------EKYLKRVALPWP-D  148 (177)
T ss_pred             cceeeeeeEecCCCcEEEEEeCCCCCcccceeeEeecCCceEEEecC-------------------CceEeeEecCCC-c
Confidence            3457789998777 588999999999888 99999842 34555421                   125578999976 6


Q ss_pred             cCceEEEEeCCEEEEEEeccCCCC
Q 031640          120 VDRITAHIANSTLTVTVPKKDIKK  143 (156)
Q Consensus       120 ~~~i~A~~~~GvL~I~~pK~~~~~  143 (156)
                      .+.++|.|+||||+|++-+.++..
T Consensus       149 ~e~~~~t~nNgILEIri~~~~~~~  172 (177)
T PF05455_consen  149 PEITSATFNNGILEIRIRRTEESS  172 (177)
T ss_pred             cceeeEEEeCceEEEEEeecCCCC
Confidence            788999999999999999877654

>cd06466 p23_CS_SGT1_like p23_like domain similar to the C-terminal CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 allele of Skp1)

Probab=98.82  E-value=3.2e-08  Score=65.01  Aligned_cols=77  Identities=18%  Similarity=0.239  Sum_probs=66.3

Q ss_pred             eEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEe
Q 031640           49 DWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIA  128 (156)
Q Consensus        49 di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~  128 (156)
                      |+.++++.+.|.+.+||+.++++.|.+++ +.|.|++...               ..+.|...+.|+..|+++..++.+.
T Consensus         1 dW~Qt~~~v~i~v~~~~~~~~~v~v~~~~-~~l~i~~~~~---------------~~~~~~~~~~L~~~I~~~~s~~~~~   64 (84)
T cd06466           1 DWYQTDTSVTVTIYAKNVDKEDVKVEFNE-QSLSVSIILP---------------GGSEYQLELDLFGPIDPEQSKVSVL   64 (84)
T ss_pred             CccccCCEEEEEEEECCCCHHHCEEEEec-CEEEEEEECC---------------CCCeEEEecccccccCchhcEEEEe
Confidence            56788999999999999999999999997 6899986632               0124777889999999999999999


Q ss_pred             CCEEEEEEeccCC
Q 031640          129 NSTLTVTVPKKDI  141 (156)
Q Consensus       129 ~GvL~I~~pK~~~  141 (156)
                      +|.|+|+|.|...
T Consensus        65 ~~~vei~L~K~~~   77 (84)
T cd06466          65 PTKVEITLKKAEP   77 (84)
T ss_pred             CeEEEEEEEcCCC
Confidence            9999999999875

Sgt1 interacts with multiple protein complexes and has the features of a cochaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. ScSgt1 is needed for the G1/S and G2/M cell-cycle transitions, and for assembly of the core kinetochore complex (CBF3) via activation of Ctf13, the F-box protein. Binding of Hsp82 (a yeast Hsp90 homologue) to ScSgt1, promotes the binding of Sgt1 to Skp1 and of Skp1 to Ctf13. Some proteins in this group have an SGT1-specific (SGS) domain at the extreme C-terminus. The ScSgt1-SGS domain binds adenylate cyclase. The hSgt1-SGS domain interacts with some S100 family proteins, and studies sug

>PF04969 CS: CS domain; InterPro: IPR017447 The function of the CS domain is unknown

Probab=98.61  E-value=1.7e-06  Score=55.53  Aligned_cols=77  Identities=22%  Similarity=0.264  Sum_probs=63.5

Q ss_pred             ccceEEeCCCeEEEEEEeCCCC--CCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCce
Q 031640           46 TRIDWHDTPECHVFKADLSGFH--KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRI  123 (156)
Q Consensus        46 p~~di~e~~~~y~i~~~lPG~~--~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i  123 (156)
                      |.+++.++++...|.+.+++..  +++++|.+++ +.|.|+......               ..|.....|...|+++..
T Consensus         1 ~~y~W~Qt~~~V~v~i~~~~~~~~~~dv~v~~~~-~~l~v~~~~~~~---------------~~~~~~~~L~~~I~~~~s   64 (79)
T PF04969_consen    1 PRYDWYQTDDEVTVTIPVKPVDISKEDVKVDFTD-TSLSVSIKSGDG---------------KEYLLEGELFGEIDPDES   64 (79)
T ss_dssp             SSEEEEEESSEEEEEEE-TTTTSSGGGEEEEEET-TEEEEEEEETTS---------------CEEEEEEEBSS-BECCCE
T ss_pred             CCeEEEECCCEEEEEEEEcCCCCChHHeEEEEEe-eEEEEEEEccCC---------------ceEEEEEEEeeeEcchhc
Confidence            5689999999999999996664  9999999998 599999654322               136677889999999999


Q ss_pred             EEEEeCCEEEEEEec
Q 031640          124 TAHIANSTLTVTVPK  138 (156)
Q Consensus       124 ~A~~~~GvL~I~~pK  138 (156)
                      +..+.++.|.|+|.|
T Consensus        65 ~~~~~~~~i~i~L~K   79 (79)
T PF04969_consen   65 TWKVKDNKIEITLKK   79 (79)
T ss_dssp             EEEEETTEEEEEEEB
T ss_pred             EEEEECCEEEEEEEC
Confidence            999999999999987

The CS domain is sometimes found C-terminal to the CHORD domain (IPR007051 from INTERPRO) in metazoan proteins, but occurs separately from the CHORD domain in plants. This association is thought to be indicative of an functional interaction between CS and CHORD domains [].; PDB: 1WGV_A 2KMW_A 2O30_B 1WH0_A 1EJF_A 2RH0_B 1RL1_A 2CR0_A 1WFI_A 2XCM_D ....

>cd06465 p23_hB-ind1_like p23_like domain found in human (h) butyrate-induced transcript 1 (B-ind1) and similar proteins

Probab=98.29  E-value=1.5e-05  Score=55.04  Aligned_cols=78  Identities=12%  Similarity=0.213  Sum_probs=65.6

Q ss_pred             ccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEE
Q 031640           46 TRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITA  125 (156)
Q Consensus        46 p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A  125 (156)
                      |.+++..+.+.+.|.+.+||.  +++.|.++. +.|.|++....     +         ...|.-.+.|...|+++..+.
T Consensus         1 p~~~W~Qt~~~V~i~i~~~~~--~~~~V~~~~-~~l~v~~~~~~-----~---------~~~y~~~~~L~~~I~pe~s~~   63 (108)
T cd06465           1 PPVLWAQRSDVVYLTIELPDA--KDPKIKLEP-TSLSFKAKGGG-----G---------GKKYEFDLEFYKEIDPEESKY   63 (108)
T ss_pred             CceeeeECCCEEEEEEEeCCC--CCcEEEEEC-CEEEEEEEcCC-----C---------CeeEEEEeEhhhhccccccEE
Confidence            468899999999999999998  889999998 59999975321     0         113566778999999999999


Q ss_pred             EEeCCEEEEEEeccC
Q 031640          126 HIANSTLTVTVPKKD  140 (156)
Q Consensus       126 ~~~~GvL~I~~pK~~  140 (156)
                      ++.++.|+|+|.|..
T Consensus        64 ~v~~~kveI~L~K~~   78 (108)
T cd06465          64 KVTGRQIEFVLRKKE   78 (108)
T ss_pred             EecCCeEEEEEEECC
Confidence            999999999999987

hB-ind1 participates in signaling by the small GTPase Rac1. It binds to Rac1 and enhances different Rac1 effects including activation of nuclear factor (NF) kappaB and activation of c-Jun N-terminal kinase (JNK). hB-ind1 also plays a part in the RNA replication and particle production of Hepatitis C virus (HCV) through its interaction with heat shock protein Hsp90, HCV nonstructural protein 5A (NS5A), and the immunophilin FKBP8. hB-ind1 is upregulated in the outer layer of Chinese hamster V79 cells grown as multicell spheroids, versus in the same cells grown as monolayers. This group includes the Saccharomyces cerevisiae Sba1, a co-chaperone of the Hsp90. Sba1 has been shown to be is required for telomere length maintenance, and may modulate telomerase DNA-binding activity.

>cd06489 p23_CS_hSgt1_like p23_like domain similar to the C-terminal CS (CHORD-SGT1) domain of human (h) Sgt1 and related proteins

Probab=98.20  E-value=2.2e-05  Score=51.74  Aligned_cols=78  Identities=19%  Similarity=0.298  Sum_probs=64.2

Q ss_pred             eEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEe
Q 031640           49 DWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIA  128 (156)
Q Consensus        49 di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~  128 (156)
                      |+.++++...|.+.++|+.++++.|.+++ +.|.+++.....               ..|.-.+.|...|+++..+....
T Consensus         1 dW~Q~~~~V~iti~~k~~~~~~~~v~~~~-~~l~~~~~~~~~---------------~~y~~~~~L~~~I~p~~s~~~v~   64 (84)
T cd06489           1 DWYQTESQVVITILIKNVKPEDVSVEFEK-RELSATVKLPSG---------------NDYSLKLHLLHPIVPEQSSYKIL   64 (84)
T ss_pred             CccccCCEEEEEEEECCCCHHHCEEEEeC-CEEEEEEECCCC---------------CcEEEeeecCceecchhcEEEEe
Confidence            56788899999999999999999999998 589998754211               12556678989999998888889


Q ss_pred             CCEEEEEEeccCCC
Q 031640          129 NSTLTVTVPKKDIK  142 (156)
Q Consensus       129 ~GvL~I~~pK~~~~  142 (156)
                      .+.++|.|.|.+..
T Consensus        65 ~~kiei~L~K~~~~   78 (84)
T cd06489          65 STKIEIKLKKTEAI   78 (84)
T ss_pred             CcEEEEEEEcCCCC
Confidence            99999999998643

hSgt1 is a co-chaperone which has been shown to be elevated in HEp-2 cells as a result of stress conditions such as heat shock. It interacts with the heat shock proteins (HSPs) Hsp70 and Hsp90, and it expression pattern is synchronized with these two Hsps. The interaction with HSP90 has been shown to involve the hSgt1_CS domain, and appears to be required for correct kinetochore assembly and efficient cell division. Some proteins in this subgroup contain a tetratricopeptide repeat (TPR) HSP-binding domain N-terminal to this CS domain, and most proteins in this subgroup contain a Sgt1-specific (SGS) domain C-terminal to the CS domain. The SGS domain interacts with some S100 family proteins. Studies suggest that S100A6 modulates in a Ca2+ dependent manner the interactions of hSgt1 with Hsp90 and Hsp70. The yeast Sgt1 CS domain is not found in this subgroup.

>PF08190 PIH1: pre-RNA processing PIH1/Nop17

Probab=98.10  E-value=1.9e-05  Score=64.14  Aligned_cols=65  Identities=31%  Similarity=0.468  Sum_probs=56.2

Q ss_pred             CCeEEEEEEeCCC-CCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEE--eCC
Q 031640           54 PECHVFKADLSGF-HKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHI--ANS  130 (156)
Q Consensus        54 ~~~y~i~~~lPG~-~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~--~~G  130 (156)
                      .+.++|++.|||+ +..+|+|.|.+ ..|.|.....                  .|.-.+.||..|+.+..+|.|  +.+
T Consensus       260 p~~lvv~i~LP~~~s~~~i~LdV~~-~~l~l~~~~~------------------~y~L~l~LP~~V~~~~~~Akf~~~~~  320 (328)
T PF08190_consen  260 PEELVVEIELPGVESASDIDLDVSE-DRLSLSSPKP------------------KYRLDLPLPYPVDEDNGKAKFDKKTK  320 (328)
T ss_pred             CceEEEEEECCCcCccceeEEEEeC-CEEEEEeCCC------------------ceEEEccCCCcccCCCceEEEccCCC
Confidence            4689999999999 88899999998 5898885421                  366789999999999999999  668


Q ss_pred             EEEEEEe
Q 031640          131 TLTVTVP  137 (156)
Q Consensus       131 vL~I~~p  137 (156)
                      +|+|+||
T Consensus       321 ~L~vtlp  327 (328)
T PF08190_consen  321 TLTVTLP  327 (328)
T ss_pred             EEEEEEE
Confidence            9999998

>cd06488 p23_melusin_like p23_like domain similar to the C-terminal (tail) domain of vertebrate Melusin and related proteins

Probab=98.02  E-value=0.00014  Score=48.39  Aligned_cols=81  Identities=19%  Similarity=0.179  Sum_probs=67.0

Q ss_pred             cceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEE
Q 031640           47 RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAH  126 (156)
Q Consensus        47 ~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~  126 (156)
                      +.|++.+++...|.+.+.|+.++++.|.+++ +.|.|+......               ..|.-.+.|-..|+++..+-.
T Consensus         2 R~dW~Qs~~~V~ItI~~k~~~~~~~~v~~~~-~~l~v~~~~~~~---------------~~y~~~l~L~~~I~~~~s~~~   65 (87)
T cd06488           2 RHDWHQTGSHVVVSVYAKNSNPELSVVEANS-TVLTIHIVFEGN---------------KEFQLDIELWGVIDVEKSSVN   65 (87)
T ss_pred             CccEeeCCCEEEEEEEECcCCccceEEEecC-CEEEEEEECCCC---------------ceEEEEeeccceEChhHcEEE
Confidence            4689999999999999999999999999987 588887543310               136677789889999998888


Q ss_pred             EeCCEEEEEEeccCCCC
Q 031640          127 IANSTLTVTVPKKDIKK  143 (156)
Q Consensus       127 ~~~GvL~I~~pK~~~~~  143 (156)
                      ...+.++|++.|+++..
T Consensus        66 v~~~kvei~L~K~~~~~   82 (87)
T cd06488          66 MLPTKVEIKLRKAEPGS   82 (87)
T ss_pred             ecCcEEEEEEEeCCCCc
Confidence            99999999999987543

Melusin's tail domain interacts with the cytoplasmic domain of beta1-A and beta1-D isoforms of beta1 integrin, it does not bind other integrin beta subunits. Melusin is a muscle-specific protein expressed in skeletal and cardiac muscles but not in smooth muscle or other tissues. It is needed for heart hypertrophy following mechanical overload. The integrin-binding portion of this domain appears to be sequestered in the full length melusin protein, Ca2+ may modulate the protein's conformation exposing this binding site. This group includes Chordc1, also known as Chp-1, which is conserved from vertebrates to humans. Mammalian Chordc1 interacts with the heat shock protein (HSP) Hsp90 and is implicated in circadian and/or homeostatic mechanisms in the brain. The N-terminal portions of proteins belonging to this group contain two cysteine and histidine rich domain (C

>cd06468 p23_CacyBP p23_like domain found in proteins similar to Calcyclin-Binding Protein(CacyBP)/Siah-1-interacting protein (SIP)

Probab=97.94  E-value=0.00021  Score=47.66  Aligned_cols=79  Identities=14%  Similarity=0.298  Sum_probs=63.4

Q ss_pred             cceEEeCCCeEEEEEEeCCCCC---CCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEE-CCCCcccCc
Q 031640           47 RIDWHDTPECHVFKADLSGFHK---HDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQ-LPENAMVDR  122 (156)
Q Consensus        47 ~~di~e~~~~y~i~~~lPG~~~---edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~-LP~~vd~~~  122 (156)
                      .+++.++++...|.+.+|+...   ++++|.++. +.|.|++....     +.          .|.-.+. |-..|+++.
T Consensus         3 ~y~W~Qt~~~V~i~i~~~~~~~~~~~~v~v~~~~-~~l~v~~~~~~-----~~----------~~~~~~~~L~~~I~~e~   66 (92)
T cd06468           3 KYAWDQSDKFVKIYITLKGVHQLPKENIQVEFTE-RSFELKVHDLN-----GK----------NYRFTINRLLKKIDPEK   66 (92)
T ss_pred             eeeeecCCCEEEEEEEccCCCcCCcccEEEEecC-CEEEEEEECCC-----Cc----------EEEEEehHhhCccCccc
Confidence            4688999999999999999976   999999998 58999874211     11          1333443 888899999


Q ss_pred             eEEEEeCCEEEEEEeccCC
Q 031640          123 ITAHIANSTLTVTVPKKDI  141 (156)
Q Consensus       123 i~A~~~~GvL~I~~pK~~~  141 (156)
                      .+..+..+-++|+|.|+++
T Consensus        67 s~~~~~~~ki~i~L~K~~~   85 (92)
T cd06468          67 SSFKVKTDRIVITLAKKKE   85 (92)
T ss_pred             cEEEEeCCEEEEEEEeCCC
Confidence            9999999999999999875

CacyBP/SIP interacts with S100A6 (calcyclin), with some other members of the S100 family, with tubulin, and with Siah-1 and Skp-1. The latter two are components of the ubiquitin ligase that regulates beta-catenin degradation. The beta-catenin gene is an oncogene participating in tumorigenesis in many different cancers. Overexpression of CacyBP/SIP, in part through its effect on the expression of beta-catenin, inhibits the proliferation, tumorigenicity, and invasion of gastric cancer cells. CacyBP/SIP is abundant in neurons and neuroblastoma NB2a cells. An extensive re-organization of microtubules accompanies the differentiation of NB2a cells. CacyBP/SIP may contribute to NB2a cell differentiation through binding to and increasing the oligomerization of tubulin. CacyBP/SIP is also implicated in differentiation of erythroid cells, rat neonatal cardiomyocytes

>cd06467 p23_NUDC_like p23_like domain of NUD (nuclear distribution) C and similar proteins

Probab=97.92  E-value=0.00015  Score=47.45  Aligned_cols=75  Identities=24%  Similarity=0.263  Sum_probs=60.2

Q ss_pred             ceEEeCCCeEEEEEEeC-CCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEE
Q 031640           48 IDWHDTPECHVFKADLS-GFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAH  126 (156)
Q Consensus        48 ~di~e~~~~y~i~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~  126 (156)
                      +.+.++++...|.+.+| ++.+++++|.+.+ +.|.|+...       +           .+.-.-.|...|+++..+-.
T Consensus         1 y~W~Qt~~~V~i~i~~~~~~~~~dv~v~~~~-~~l~v~~~~-------~-----------~~~l~~~L~~~I~~~~s~w~   61 (85)
T cd06467           1 YSWTQTLDEVTVTIPLPEGTKSKDVKVEITP-KHLKVGVKG-------G-----------EPLLDGELYAKVKVDESTWT   61 (85)
T ss_pred             CEEEeeCCEEEEEEECCCCCcceeEEEEEEc-CEEEEEECC-------C-----------CceEcCcccCceeEcCCEEE
Confidence            35788899999999997 7899999999998 589888631       0           01122358888999998888


Q ss_pred             EeC-CEEEEEEeccCC
Q 031640          127 IAN-STLTVTVPKKDI  141 (156)
Q Consensus       127 ~~~-GvL~I~~pK~~~  141 (156)
                      +++ ..|.|+|+|+++
T Consensus        62 ~~~~~~v~i~L~K~~~   77 (85)
T cd06467          62 LEDGKLLEITLEKRNE   77 (85)
T ss_pred             EeCCCEEEEEEEECCC
Confidence            999 999999999876

Aspergillus nidulas (An) NUDC is needed for nuclear movement. AnNUDC is localized at the hyphal cortex, and binds NUDF at spindle pole bodies (SPBs) and in the cytoplasm at different stages in the cell cycle. At the SPBs it is part of the dynein molecular motor/NUDF complex that regulates microtubule dynamics. Mammalian(m) NUDC associates both with the dynein complex and also with an anti-inflammatory enzyme, platelet activating factor acetylhydrolase I, PAF-AH(I) complex, through binding mNUDF, the regulatory beta subunit of PAF-AH(I). mNUDC is important for cell proliferation both in normal and tumor tissues. Its expression is elevated in various cell types undergoing mitosis or stimulated to proliferate, with high expression levels observed in leukemic cells and tumors. For a leukemic cell line, human NUDC was shown to activate the thrombopoietin (TPO) receptor (Mpl) by binding to its ext

>cd06493 p23_NUDCD1_like p23_NUDCD1: p23-like NUD (nuclear distribution) C-like domain found in human NUD (nuclear distribution) C domain-containing protein 1, NUDCD1 (also known as CML66), and similar proteins

Probab=97.78  E-value=0.00047  Score=45.52  Aligned_cols=76  Identities=20%  Similarity=0.194  Sum_probs=58.8

Q ss_pred             ceEEeCCCeEEEEEEeC-CCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEE
Q 031640           48 IDWHDTPECHVFKADLS-GFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAH  126 (156)
Q Consensus        48 ~di~e~~~~y~i~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~  126 (156)
                      +++.++.+...|.+.+| |+.+++++|+++. +.|.|...  .+.               .+ -.-.|...|+++..+=.
T Consensus         1 Y~W~Qt~~~V~v~i~~p~~~~~~dv~v~~~~-~~l~v~~~--~~~---------------~~-~~g~L~~~I~~d~Stw~   61 (85)
T cd06493           1 YYWQQTEEDLTLTIRLPEDTTKEDIRIKFLP-DHISIALK--DQA---------------PL-LEGKLYSSIDHESSTWI   61 (85)
T ss_pred             CccEEeCCEEEEEEECCCCCChhhEEEEEec-CEEEEEeC--CCC---------------eE-EeCcccCcccccCcEEE
Confidence            35788899999999996 9999999999998 58888642  000               01 22368888999998877


Q ss_pred             EeCC-EEEEEEeccCCC
Q 031640          127 IANS-TLTVTVPKKDIK  142 (156)
Q Consensus       127 ~~~G-vL~I~~pK~~~~  142 (156)
                      +++| .|.|+|.|+++.
T Consensus        62 i~~~~~l~i~L~K~~~~   78 (85)
T cd06493          62 IKENKSLEVSLIKKDEG   78 (85)
T ss_pred             EeCCCEEEEEEEECCCC
Confidence            8777 799999998753

NUDCD1/CML66 is a broadly immunogenic tumor associated antigen, which is highly expressed in a variety of solid tumors and in leukemias. In normal tissues high expression of NUDCD1/CML66 is limited to testis and heart.

>cd00237 p23 p23 binds heat shock protein (Hsp)90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor

Probab=97.58  E-value=0.0022  Score=44.38  Aligned_cols=78  Identities=15%  Similarity=0.181  Sum_probs=61.9

Q ss_pred             ccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEE
Q 031640           46 TRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITA  125 (156)
Q Consensus        46 p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A  125 (156)
                      |.+++.++.+.+.|++.+|+  .++++|.+++ +.|.++|...     ++.          .|.-++.|-..|+++..+.
T Consensus         2 p~v~WaQr~~~V~ltI~v~d--~~d~~v~l~~-~~l~f~~~~~-----~g~----------~y~~~l~l~~~I~pe~Sk~   63 (106)
T cd00237           2 AKTLWYDRRDYVFIEFCVED--SKDVKVDFEK-SKLTFSCLNG-----DNV----------KIYNEIELYDRVDPNDSKH   63 (106)
T ss_pred             CcceeeECCCEEEEEEEeCC--CCCcEEEEec-CEEEEEEECC-----CCc----------EEEEEEEeecccCcccCeE
Confidence            67899999999999999999  5899999998 5999998431     111          1344667778899998888


Q ss_pred             EEeCCEEEEEEeccCC
Q 031640          126 HIANSTLTVTVPKKDI  141 (156)
Q Consensus       126 ~~~~GvL~I~~pK~~~  141 (156)
                      ....-.+.|.|.|+++
T Consensus        64 ~v~~r~ve~~L~K~~~   79 (106)
T cd00237          64 KRTDRSILCCLRKGKE   79 (106)
T ss_pred             EeCCceEEEEEEeCCC
Confidence            8878889999999764

p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis.

>cd06494 p23_NUDCD2_like p23-like NUD (nuclear distribution) C-like found in human NUDC domain-containing protein 2 (NUDCD2) and similar proteins

Probab=97.33  E-value=0.0034  Score=42.40  Aligned_cols=78  Identities=18%  Similarity=0.307  Sum_probs=61.0

Q ss_pred             CccceEEeCCCeEEEEEEeC-CCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCce
Q 031640           45 PTRIDWHDTPECHVFKADLS-GFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRI  123 (156)
Q Consensus        45 ~p~~di~e~~~~y~i~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i  123 (156)
                      .+.+.+..+.+...|++.+| |...+|+.|.+.. +.|.|....        ..     .-.|      .|...|+++..
T Consensus         5 ~~~y~W~QT~~eV~v~i~lp~~~~~kdv~V~i~~-~~l~V~~~g--------~~-----~l~G------~L~~~I~~des   64 (93)
T cd06494           5 TPWGCWYQTMDEVFIEVNVPPGTRAKDVKCKLGS-RDISLAVKG--------QE-----VLKG------KLFDSVVADEC   64 (93)
T ss_pred             CCCcEEEeEcCEEEEEEECCCCCceeeEEEEEEc-CEEEEEECC--------EE-----EEcC------cccCccCcccC
Confidence            45689999999999999998 8999999999998 588887421        00     0112      57788888988


Q ss_pred             EEEEeCCE-EEEEEeccCCC
Q 031640          124 TAHIANST-LTVTVPKKDIK  142 (156)
Q Consensus       124 ~A~~~~Gv-L~I~~pK~~~~  142 (156)
                      .=.+++|. |.|.|.|....
T Consensus        65 tWtled~k~l~I~L~K~~~~   84 (93)
T cd06494          65 TWTLEDRKLIRIVLTKSNRD   84 (93)
T ss_pred             EEEEECCcEEEEEEEeCCCC
Confidence            88888875 89999997643

Little is known about the function of the proteins in this subgroup.

>PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional

Probab=97.10  E-value=0.0046  Score=51.23  Aligned_cols=81  Identities=16%  Similarity=0.242  Sum_probs=67.3

Q ss_pred             CccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceE
Q 031640           45 PTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRIT  124 (156)
Q Consensus        45 ~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~  124 (156)
                      ..+.+++.+++.+.|.|-+.|+.++++.|.+.+ +.|.|+......               ..|...+.|-..|+++..+
T Consensus       156 ~~r~dWyQs~~~V~i~i~~k~~~~~~~~v~~~~-~~l~v~~~~~~~---------------~~y~~~~~L~~~I~p~~s~  219 (356)
T PLN03088        156 KYRHEFYQKPEEVVVTVFAKGVPAENVNVDFGE-QILSVVIEVPGE---------------DAYHLQPRLFGKIIPDKCK  219 (356)
T ss_pred             ccccceeecCCEEEEEEEecCCChHHcEEEeec-CEEEEEEecCCC---------------cceeecccccccccccccE
Confidence            367899999999999999999999999999997 588888643211               1255567888889999999


Q ss_pred             EEEeCCEEEEEEeccCC
Q 031640          125 AHIANSTLTVTVPKKDI  141 (156)
Q Consensus       125 A~~~~GvL~I~~pK~~~  141 (156)
                      ..+.-..++|+|.|.+.
T Consensus       220 ~~v~~~Kiei~l~K~~~  236 (356)
T PLN03088        220 YEVLSTKIEIRLAKAEP  236 (356)
T ss_pred             EEEecceEEEEEecCCC
Confidence            99988899999999864

>KOG1309 consensus Suppressor of G2 allele of skp1 [Signal transduction mechanisms]

Probab=96.89  E-value=0.0058  Score=45.96  Aligned_cols=81  Identities=22%  Similarity=0.340  Sum_probs=63.0

Q ss_pred             CccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceE
Q 031640           45 PTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRIT  124 (156)
Q Consensus        45 ~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~  124 (156)
                      .+++|+++++...+|.+-.+++.++|+.|.+.+ +.|.+..+.+.+..               |.-...|-..|.+++.+
T Consensus         3 k~r~DwyQt~~~vvIti~~k~v~~~~v~v~~s~-~~l~~~~~~~~g~~---------------~~l~~~L~~~I~pe~~s   66 (196)
T KOG1309|consen    3 KIRHDWYQTETSVVITIFAKNVPKEDVNVEISE-NTLSIVIQLPSGSE---------------YNLQLKLYHEIIPEKSS   66 (196)
T ss_pred             cccceeecCCceEEEEEEecCCCccceeEEeec-ceEEEEEecCCchh---------------hhhhHHhccccccccee
Confidence            457899999999999999999999999999997 68888866542221               33333466668888877


Q ss_pred             EEEeCCEEEEEEeccCC
Q 031640          125 AHIANSTLTVTVPKKDI  141 (156)
Q Consensus       125 A~~~~GvL~I~~pK~~~  141 (156)
                      -++----++|+|+|.+.
T Consensus        67 ~k~~stKVEI~L~K~~~   83 (196)
T KOG1309|consen   67 FKVFSTKVEITLAKAEI   83 (196)
T ss_pred             eEeeeeeEEEEeccccc
Confidence            77777888999998654

>cd06490 p23_NCB5OR p23_like domain found in NAD(P)H cytochrome b5 (NCB5) oxidoreductase (OR) and similar proteins

Probab=96.68  E-value=0.057  Score=35.79  Aligned_cols=78  Identities=15%  Similarity=0.154  Sum_probs=55.8

Q ss_pred             ceEEeCCCeEEEEEEeCC--CCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEE
Q 031640           48 IDWHDTPECHVFKADLSG--FHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITA  125 (156)
Q Consensus        48 ~di~e~~~~y~i~~~lPG--~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A  125 (156)
                      .|++.+++...|.+-..+  ....++.+.... +.|.|+-... .               ..|...+.|=..++.+. +.
T Consensus         1 ~DWyQt~~~Vtitiy~K~~~~~~~~v~v~~~~-~~l~v~~~~~-~---------------~~~~~~~~L~~~I~~~~-~~   62 (87)
T cd06490           1 YDWFQTDSEVTIVVYTKSKGNPADIVIVDDQQ-RELRVEIILG-D---------------KSYLLHLDLSNEVQWPC-EV   62 (87)
T ss_pred             CCceECCCEEEEEEEEcccCCCCccEEEECCC-CEEEEEEECC-C---------------ceEEEeeeccccCCCCc-EE
Confidence            478999999999999885  455555566565 4788875432 1               02666778877788775 55


Q ss_pred             EE--eCCEEEEEEeccCCCC
Q 031640          126 HI--ANSTLTVTVPKKDIKK  143 (156)
Q Consensus       126 ~~--~~GvL~I~~pK~~~~~  143 (156)
                      ++  .-|.++|+|.|.++.+
T Consensus        63 ~~~~~~~KVEI~L~K~e~~~   82 (87)
T cd06490          63 RISTETGKIELVLKKKEPEK   82 (87)
T ss_pred             EEcccCceEEEEEEcCCCCc
Confidence            55  4889999999987654

NCB5OR is widely expressed in human organs and tissues and is localized in the ER (endoplasmic reticulum). It appears to play a critical role in maintaining viable pancreatic beta cells. Mice homozygous for a targeted knockout (KO) of the gene encoding NCB5OR develop an early-onset nonautoimmune diabetes phenotype with a non-inflammatory beta-cell deficiency. The role of NCB5OR in beta cells may be in maintaining or regulating their redox status. Proteins in this group in addition contain an N-terminal cytochrome b5 domain and a C-terminal cytochrome b5 oxidoreductase domain. The gene encoding NCB5OR has been considered as a positional candidate for type II diabetes and other diabetes subtypes related to B-cell dysfunction, however variation in its coding region does not appear not to be a major contributor to the pathogenesis of these diseases.

>cd06492 p23_mNUDC_like p23-like NUD (nuclear distribution) C-like domain of mammalian(m) NUDC and similar proteins

Probab=96.00  E-value=0.1  Score=34.67  Aligned_cols=74  Identities=19%  Similarity=0.227  Sum_probs=53.7

Q ss_pred             eEEeCCCeEEEEEEeC-C--CCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEE
Q 031640           49 DWHDTPECHVFKADLS-G--FHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITA  125 (156)
Q Consensus        49 di~e~~~~y~i~~~lP-G--~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A  125 (156)
                      .+..+.+...|.+.+| +  .+.++++|.+.. +.|.|.-+.+        ...        +  .=.|...|+.+...=
T Consensus         2 ~W~QT~~ev~v~v~l~~~~~~~~kdv~v~i~~-~~l~v~~~g~--------~~~--------i--~G~L~~~V~~des~W   62 (87)
T cd06492           2 RWTQTLSEVELKVPFKVSFRLKGKDVVVDIQR-KHLKVGLKGQ--------PPI--------I--DGELYNEVKVEESSW   62 (87)
T ss_pred             ccEeecCEEEEEEECCCCCCccceEEEEEEec-CEEEEEECCC--------ceE--------E--eCcccCcccccccEE
Confidence            3456777888999986 3  889999999998 5888864211        000        1  115778888888777


Q ss_pred             EEeCC-EEEEEEeccCC
Q 031640          126 HIANS-TLTVTVPKKDI  141 (156)
Q Consensus       126 ~~~~G-vL~I~~pK~~~  141 (156)
                      .+++| .|.|+|-|...
T Consensus        63 tled~~~l~i~L~K~~~   79 (87)
T cd06492          63 LIEDGKVVTVNLEKINK   79 (87)
T ss_pred             EEeCCCEEEEEEEECCC
Confidence            78886 89999999754

Mammalian(m) NUDC associates both with the dynein complex and also with an anti-inflammatory enzyme, platelet activating factor acetylhydrolase I, PAF-AH(I) complex, through binding mNUDF, the regulatory beta subunit of PAF-AH(I). mNUDC is important for cell proliferation both in normal and tumor tissues. Its expression is elevated in various cell types undergoing mitosis or stimulated to proliferate, with high expression levels observed in leukemic cells and tumors. For a leukemic cell line, human NUDC was shown to activate the thrombopoietin (TPO) receptor (Mpl) by binding to its extracellular domain, and promoting cell proliferation and differentiation.

>cd06495 p23_NUDCD3_like p23-like NUD (nuclear distribution) C-like domain found in human NUDC domain-containing protein 3 (NUDCD3) and similar proteins

Probab=94.76  E-value=0.59  Score=32.02  Aligned_cols=80  Identities=8%  Similarity=0.108  Sum_probs=58.0

Q ss_pred             CccceEEeCCCeEEEEEEeC-CC-CCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCc
Q 031640           45 PTRIDWHDTPECHVFKADLS-GF-HKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDR  122 (156)
Q Consensus        45 ~p~~di~e~~~~y~i~~~lP-G~-~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~  122 (156)
                      ...+.+..+-+...|++.+| |. +.++|.|.+.. +.|.|.-+.....    ..+     -.|      .|+..|+.+.
T Consensus         4 ~e~Y~WtQTl~eV~V~i~lp~~~~~~kdv~v~i~~-~~l~v~~~~~~~~----~~~-----i~G------~L~~~V~~de   67 (102)
T cd06495           4 RENYTWSQDYTDVEVRVPVPKDVVKGRQVSVDLQS-SSIRVSVRDGGGE----KVL-----MEG------EFTHKINTEN   67 (102)
T ss_pred             CCceEEEeECCeEEEEEECCCCCccceEEEEEEEc-CEEEEEEecCCCC----ceE-----EeC------cccCcccCcc
Confidence            35678899999999999999 54 67899999998 5888875310000    001     011      5778888888


Q ss_pred             eEEEEeCC-EEEEEEeccC
Q 031640          123 ITAHIANS-TLTVTVPKKD  140 (156)
Q Consensus       123 i~A~~~~G-vL~I~~pK~~  140 (156)
                      ..=.+++| .|.|+|-|..
T Consensus        68 s~Wtled~~~l~I~L~K~~   86 (102)
T cd06495          68 SLWSLEPGKCVLLSLSKCS   86 (102)
T ss_pred             ceEEEeCCCEEEEEEEECC
Confidence            77778886 5899999974

Little is known about the function of the proteins in this subgroup.

>PF13349 DUF4097: Domain of unknown function (DUF4097)

Probab=88.41  E-value=7.4  Score=27.89  Aligned_cols=82  Identities=12%  Similarity=0.160  Sum_probs=50.4

Q ss_pred             ccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEE
Q 031640           46 TRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITA  125 (156)
Q Consensus        46 p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A  125 (156)
                      ..+.|...++ ..+++..   ..+.++++.++ +.|.|+.+.......  ..+..... ...-.-.+.||+....++++.
T Consensus        66 ~~V~I~~~~~-~~i~v~~---~~k~~~~~~~~-~~L~I~~~~~~~~~~--~~~~~~~~-~~~~~i~I~lP~~~~l~~i~i  137 (166)
T PF13349_consen   66 GDVEIKPSDD-DKIKVEY---NGKKPEISVEG-GTLTIKSKDRESFFF--KGFNFNNS-DNKSKITIYLPKDYKLDKIDI  137 (166)
T ss_pred             eeEEEEEcCC-ccEEEEE---cCcEEEEEEcC-CEEEEEEeccccccc--ceEEEccc-CCCcEEEEEECCCCceeEEEE
Confidence            3456666443 4445554   22268888887 599999762211111  11211111 334567889999998899999


Q ss_pred             EEeCCEEEEE
Q 031640          126 HIANSTLTVT  135 (156)
Q Consensus       126 ~~~~GvL~I~  135 (156)
                      ...+|-+.|.
T Consensus       138 ~~~~G~i~i~  147 (166)
T PF13349_consen  138 KTSSGDITIE  147 (166)
T ss_pred             EeccccEEEE
Confidence            9999977765

>KOG3158 consensus HSP90 co-chaperone p23 [Posttranslational modification, protein turnover, chaperones]

Probab=88.39  E-value=2.6  Score=31.68  Aligned_cols=80  Identities=15%  Similarity=0.267  Sum_probs=58.2

Q ss_pred             CCCccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCc
Q 031640           43 MIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDR  122 (156)
Q Consensus        43 ~~~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~  122 (156)
                      ...|.+.+.++.+.+.+++.++--  .+..|.++. +.|+++|+.....              -.+..+|.|=..|++++
T Consensus         5 ~~~p~v~Waqr~~~vyltv~Ved~--~d~~v~~e~-~~l~fs~k~~~d~--------------~~~~~~ief~~eIdpe~   67 (180)
T KOG3158|consen    5 MQPPEVKWAQRRDLVYLTVCVEDA--KDVHVNLEP-SKLTFSCKSGADN--------------HKYENEIEFFDEIDPEK   67 (180)
T ss_pred             ccCCcchhhhhcCeEEEEEEeccC--ccceeeccc-cEEEEEeccCCCc--------------eeeEEeeehhhhcCHhh
Confidence            456788889999999999999866  566688886 5899998764221              12556688888899999


Q ss_pred             eEEEEeCCEEEEEEeccC
Q 031640          123 ITAHIANSTLTVTVPKKD  140 (156)
Q Consensus       123 i~A~~~~GvL~I~~pK~~  140 (156)
                      .+.+-. +-....++++.
T Consensus        68 sk~k~~-~r~if~i~~K~   84 (180)
T KOG3158|consen   68 SKHKRT-SRSIFCILRKK   84 (180)
T ss_pred             cccccc-ceEEEEEEEcc
Confidence            888876 55555555443

>KOG1667 consensus Zn2+-binding protein Melusin/RAR1, contains CHORD domain [General function prediction only]

Probab=85.15  E-value=6.7  Score=31.40  Aligned_cols=86  Identities=15%  Similarity=0.214  Sum_probs=69.0

Q ss_pred             CCccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCce
Q 031640           44 IPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRI  123 (156)
Q Consensus        44 ~~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i  123 (156)
                      ..-+.|+..+++.+.|.+..-|.-++.-.|..+. ..|.|.-.....              -.+|...+.|=.-|+.+..
T Consensus       213 ~~cR~Dwhqt~~~Vti~VY~k~~lpe~s~iean~-~~l~V~ivf~~g--------------na~fd~d~kLwgvvnve~s  277 (320)
T KOG1667|consen  213 VKCRHDWHQTNGFVTINVYAKGALPETSNIEANG-TTLHVSIVFGFG--------------NASFDLDYKLWGVVNVEES  277 (320)
T ss_pred             ccchhhhhhcCCeEEEEEEeccCCcccceeeeCC-eEEEEEEEecCC--------------Cceeeccceeeeeechhhc
Confidence            3445789999999999999999999988888875 688888654322              1247777778777999999


Q ss_pred             EEEEeCCEEEEEEeccCCCCC
Q 031640          124 TAHIANSTLTVTVPKKDIKKH  144 (156)
Q Consensus       124 ~A~~~~GvL~I~~pK~~~~~~  144 (156)
                      .+.+-.-.++|+|+|+++.+.
T Consensus       278 ~v~m~~tkVEIsl~k~ep~sW  298 (320)
T KOG1667|consen  278 SVVMGETKVEISLKKAEPGSW  298 (320)
T ss_pred             eEEeecceEEEEEeccCCCCc
Confidence            999999999999999988665

>cd06482 ACD_HspB10 Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB10, also known as sperm outer dense fiber protein (ODFP), and similar proteins

Probab=85.12  E-value=2.3  Score=28.19  Aligned_cols=34  Identities=6%  Similarity=0.174  Sum_probs=29.6

Q ss_pred             eEEEEEECCCCcccCceEEEEeCCEEEEEEeccCC
Q 031640          107 KFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDI  141 (156)
Q Consensus       107 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~~~  141 (156)
                      .|.-+..|| +++++.|+-++++|.|+|..-+...
T Consensus         9 ~~~v~adlP-G~~kedI~V~v~~~~L~I~ger~~~   42 (87)
T cd06482           9 NVLASVDVC-GFEPDQVKVKVKDGKVQVSAERENR   42 (87)
T ss_pred             EEEEEEECC-CCCHHHeEEEEECCEEEEEEEEecc
Confidence            467778999 8999999999999999999987553

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB10 occurs exclusively in the axoneme of sperm cells and may have a cytoskeletal role.

>PF14913 DPCD: DPCD protein family

Probab=81.47  E-value=16  Score=27.93  Aligned_cols=79  Identities=16%  Similarity=0.305  Sum_probs=56.6

Q ss_pred             CCCccceEEeCCCeEEEEE-EeCCCCCCCeEEEEeCC-cEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCC---
Q 031640           43 MIPTRIDWHDTPECHVFKA-DLSGFHKHDVKVEIEDG-RVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPEN---  117 (156)
Q Consensus        43 ~~~p~~di~e~~~~y~i~~-~lPG~~~edi~V~v~~~-~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~---  117 (156)
                      ...|-+-=.++...|.-++ +|| +.++-.+|+++++ +.++|+.+.                  ..|.+.|.+|+-   
T Consensus        84 s~nP~~~r~dTk~~fqWRIRNLP-YP~dvYsVtvd~~~r~ivvRTtN------------------KKYyKk~~IPDl~R~  144 (194)
T PF14913_consen   84 SSNPIFVRRDTKTSFQWRIRNLP-YPKDVYSVTVDEDERCIVVRTTN------------------KKYYKKFSIPDLDRC  144 (194)
T ss_pred             CCCCEEEEEcCccceEEEEccCC-CCccceEEEEcCCCcEEEEECcC------------------ccceeEecCCcHHhh
Confidence            4455555577888999998 677 4567777777653 478888432                  136678888853   


Q ss_pred             ---cccCceEEEEeCCEEEEEEeccC
Q 031640          118 ---AMVDRITAHIANSTLTVTVPKKD  140 (156)
Q Consensus       118 ---vd~~~i~A~~~~GvL~I~~pK~~  140 (156)
                         .+.+.++....|..|.|+..|..
T Consensus       145 ~l~l~~~~ls~~h~nNTLIIsYkKP~  170 (194)
T PF14913_consen  145 GLPLEQSALSFAHQNNTLIISYKKPK  170 (194)
T ss_pred             CCCcchhhceeeeecCeEEEEecCcH
Confidence               35667888889999999998854

>COG5091 SGT1 Suppressor of G2 allele of skp1 and related proteins [General function prediction only]

Probab=80.17  E-value=0.87  Score=36.86  Aligned_cols=83  Identities=13%  Similarity=0.095  Sum_probs=63.2

Q ss_pred             CCccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCce
Q 031640           44 IPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRI  123 (156)
Q Consensus        44 ~~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i  123 (156)
                      ....+++.++.+...|-+.-|-+..++|++.++. |.|.|+.+.+...              --+.....|-..|+++..
T Consensus       175 ~~i~yd~s~Ts~t~~ifiy~~pv~deqVs~~~e~-NTL~I~~q~~~~~--------------~~~~~~~~Ly~ev~P~~~  239 (368)
T COG5091         175 MEIAYDFSETSDTAIIFIYRPPVGDEQVSPVLEG-NTLSISYQPRRLR--------------LWNDITISLYKEVYPDIR  239 (368)
T ss_pred             ceeeeeccccceeEEEEEecCCCCccccceeecC-Ccceeeeeccccc--------------hHHHhhhhhhhhcCcchh
Confidence            3456778888899999999999999999999996 7999996644321              124456677788888887


Q ss_pred             EEEEeCCEEEEEEeccCC
Q 031640          124 TAHIANSTLTVTVPKKDI  141 (156)
Q Consensus       124 ~A~~~~GvL~I~~pK~~~  141 (156)
                      .-+.---+++|++.|.+.
T Consensus       240 s~k~fsK~~e~~l~KV~~  257 (368)
T COG5091         240 SIKSFSKRVEVHLRKVEM  257 (368)
T ss_pred             hhhhcchhheehhhhhhh
Confidence            777666888888887654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	156
1gme_A	151	Crystal Structure And Assembly Of An Eukaryotic Sma		3e-23
2byu_A	101	Negative Stain Em Reconstruction Of M.Tuberculosis		2e-21
2h50_A	93	Multiple Distinct Assemblies Reveal Conformational		4e-21
3gla_A	100	Crystal Structure Of The Hspa From Xanthomonas Axon		3e-10
3gt6_A	103	Crystal Structure Of The Hspa From Xanthomonas Axon		3e-10

>pdb|1GME|A Chain A, Crystal Structure And Assembly Of An Eukaryotic Small Heat Shock Protein Length = 151

Iteration: 1
 Score =  103 bits (258), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/110 (52%), Positives = 80/110 (72%), Gaps = 2/110 (1%)
Query: 46  TRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAV 105
            R+DW +TPE HVFKADL G  K +VKVE+EDG VL +SGE+  EKE++ D+ HR+E + 
Sbjct: 44  ARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSS 103
Query: 106 GKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIKITG 155
           GKF RRF+L E+A V+ + A + N  LTVTVPK ++KK     ++I+I+G
Sbjct: 104 GKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKP--EVKAIQISG 151

>pdb|2BYU|A Chain A, Negative Stain Em Reconstruction Of M.Tuberculosis Acr1(Hsp 16.3) Fitted With Wheat Shsp Dimer Length = 101

Iteration: 1
 Score = 98.2 bits (243), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/97 (55%), Positives = 71/97 (73%)
Query: 46  TRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAV 105
            R+DW +TPE HVFKADL G  K +VKVE+EDG VL +SGE+  EKE++ D+ HR+E + 
Sbjct: 2   ARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSS 61
Query: 106 GKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIK 142
           GKF RRF+L E+A V+ + A + N  LTVTVPK  I+
Sbjct: 62  GKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAAIQ 98

>pdb|2H50|A Chain A, Multiple Distinct Assemblies Reveal Conformational Flexibility In The Small Heat Shock Protein Hsp26 Length = 93

Iteration: 1
 Score = 96.7 bits (239), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 53/93 (56%), Positives = 69/93 (74%)
Query: 46  TRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAV 105
            R+DW +TPE HVFKADL G  K +VKVE+EDG VL +SGE+  EKE++ D+ HR+E + 
Sbjct: 1   ARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSS 60
Query: 106 GKFSRRFQLPENAMVDRITAHIANSTLTVTVPK 138
           GKF RRF+L E+A V+ + A + N  LTVTVPK
Sbjct: 61  GKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPK 93

>pdb|3GLA|A Chain A, Crystal Structure Of The Hspa From Xanthomonas Axonopodis Length = 100

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 47  RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVG 106
           R+D  +     V  ADL G     ++V+++ G +L I GE+K E    T+   R+E   G
Sbjct: 6   RVDIKEEVNHFVLYADLPGIDPSQIEVQMDKG-ILSIRGERKSESSTETERFSRIERRYG 64
Query: 107 KFSRRFQLPENAMVDRITAHIANSTLTVTVPKK 139
            F RRF LP++A  D ITA   N  L + +PK+
Sbjct: 65  SFHRRFALPDSADADGITAAGRNGVLEIRIPKR 97

>pdb|3GT6|A Chain A, Crystal Structure Of The Hspa From Xanthomonas Axonopodis Length = 103

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 47  RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVG 106
           R+D  +     V  ADL G     ++V+++ G +L I GE+K E    T+   R+E   G
Sbjct: 9   RVDIKEEVNHFVLYADLPGIDPSQIEVQMDKG-ILSIRGERKSESSTETERFSRIERRYG 67
Query: 107 KFSRRFQLPENAMVDRITAHIANSTLTVTVPKK 139
            F RRF LP++A  D ITA   N  L + +PK+
Sbjct: 68  SFHRRFALPDSADADGITAAGRNGVLEIRIPKR 100

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	156
1gme_A	151	Heat shock protein 16.9B; small heat shock protein	3e-42
3gla_A	100	Low molecular weight heat shock protein; HSPA, SHP	1e-35
3aab_A	123	Putative uncharacterized protein ST1653; alpha-cry	7e-32
4eld_A	161	MJ16.5-P1, small heat shock protein HSP16.5; chape	4e-31
2klr_A	175	Alpha-crystallin B chain; protein, dimer, oligomer	2e-15
3q9p_A	85	Heat shock protein beta-1; alpha-crystallin domain	6e-15
2wj5_A	101	Heat shock protein beta-6; chaperone, disulfide bo	4e-14
2y1y_A	90	Alpha-crystallin B chain,; small heat shock protei	5e-14
3l1e_A	106	Alpha-crystallin A chain; lens transparency, polyd	1e-13
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	6e-13
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	3e-08

>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A Length = 151

 Score =  136 bits (345), Expect = 3e-42
 Identities = 58/117 (49%), Positives = 80/117 (68%), Gaps = 2/117 (1%)

Query: 39  SPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEG 98
                   R+DW +TPE HVFKADL G  K +VKVE+EDG VL +SGE+  EKE++ D+ 
Sbjct: 37  ETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKW 96

Query: 99  HRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIKITG 155
           HR+E + GKF RRF+L E+A V+ + A + N  LTVTVPK ++KK     ++I+I+G
Sbjct: 97  HRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKP--EVKAIQISG 151

>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A Length = 100

 Score =  117 bits (297), Expect = 1e-35
 Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 37  QFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTD 96
           Q+ P      R+D  +     V  ADL G     ++V+++ G +L I GE+K E    T+
Sbjct: 2   QWVP------RVDIKEEVNHFVLYADLPGIDPSQIEVQMDKG-ILSIRGERKSESSTETE 54

Query: 97  EGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKK 139
              R+E   G F RRF LP++A  D ITA   N  L + +PK+
Sbjct: 55  RFSRIERRYGSFHRRFALPDSADADGITAAGRNGVLEIRIPKR 97

>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A Length = 123

 Score =  109 bits (274), Expect = 7e-32
 Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 5/102 (4%)

Query: 43  MIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLE 102
           ++   +D ++     V  ADL+GF+K  +K  +     L I  E++I +         L 
Sbjct: 22  LVYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGV----KYLT 77

Query: 103 VAVGKFSRRFQLPENAMVD-RITAHIANSTLTVTVPKKDIKK 143
                  +  +LP N   D  I+    N  LT+ +P      
Sbjct: 78  QRPKYVRKVIRLPYNVAKDAEISGKYENGVLTIRIPIAGTSV 119

>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A Length = 161

 Score =  108 bits (272), Expect = 4e-31
 Identities = 22/154 (14%), Positives = 44/154 (28%), Gaps = 9/154 (5%)

Query: 1   MSQISRSRFAGAVGYHHPPFPLSDDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFK 60
             +   +   G                +      +       M    I   +  +     
Sbjct: 15  FKEFFATPMTGTTMIQSSTPLPPAAIESPAVAAGIQISGKGFM---PISIIEGDQHIKVI 71

Query: 61  ADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEV-AVGKFSRRFQLPENAM 119
           A L G +K D+ +       L I  ++       ++     E+    +  R  +LP    
Sbjct: 72  AWLPGVNKEDIILNAVGD-TLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVK 130

Query: 120 VDRITAHIANSTLTVTVPKKDIKKHHGHSRSIKI 153
            +  +A   N  L+V +PK +        + I I
Sbjct: 131 EENASAKFENGVLSVILPKAESSI----KKGINI 160

>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A Length = 175

 Score = 68.8 bits (168), Expect = 2e-15
 Identities = 28/136 (20%), Positives = 54/136 (39%), Gaps = 12/136 (8%)

Query: 20  FPLSDDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGR 79
           FP S            +  +P        +     +      D+  F   ++KV++    
Sbjct: 38  FPTSTSLSPFYLRPPSFLRAPSWFDTGLSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDV 97

Query: 80  VLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHI-ANSTLTVTVPK 138
            + + G    + EER DE   +     +F R++++P +     IT+ + ++  LTV  P+
Sbjct: 98  -IEVHG----KHEERQDEHGFIS---REFHRKYRIPADVDPLTITSSLSSDGVLTVNGPR 149

Query: 139 KDIKKHHGHSRSIKIT 154
           K +       R+I IT
Sbjct: 150 KQVSGPE---RTIPIT 162

>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A Length = 85

 Score = 65.1 bits (159), Expect = 6e-15
 Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 9/89 (10%)

Query: 52  DTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRR 111
            T +      D++ F   ++ V+ +DG  + I+G    +   R DE   +      F+R+
Sbjct: 4   HTADRWRVSLDVNHFAPDELTVKTKDGV-VEITG----KHAARQDEHGYIS---RCFTRK 55

Query: 112 FQLPENAMVDRITAHI-ANSTLTVTVPKK 139
           + LP      ++++ +    TLTV  P  
Sbjct: 56  YTLPPGVDPTQVSSSLSPEGTLTVEAPMP 84

>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus} Length = 101

 Score = 63.3 bits (154), Expect = 4e-14
 Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 9/93 (9%)

Query: 52  DTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRR 111
             P       D+  F   ++ V++     + +        EER DE   +     +F RR
Sbjct: 8   TDPGYFSVLLDVKHFSPEEISVKVVGDH-VEVHA----RHEERPDEHGFIA---REFHRR 59

Query: 112 FQLPENAMVDRITAHI-ANSTLTVTVPKKDIKK 143
           ++LP       +T+ +     L++       + 
Sbjct: 60  YRLPPGVDPAAVTSALSPEGVLSIQATPASAQA 92

>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A Length = 90

 Score = 62.8 bits (153), Expect = 5e-14
 Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 9/87 (10%)

Query: 58  VFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPEN 117
               D+  F   ++KV++    V+ + G    + EER DE   +     +F R++++P +
Sbjct: 9   SVNLDVKHFSPEELKVKVLG-DVIEVHG----KHEERQDEHGFIS---REFHRKYRIPAD 60

Query: 118 AMVDRITAHI-ANSTLTVTVPKKDIKK 143
                IT+ + ++  LTV  P+K +  
Sbjct: 61  VDPLTITSSMSSDGVLTVNGPRKQVSG 87

>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A Length = 106

 Score = 62.2 bits (151), Expect = 1e-13
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 10/105 (9%)

Query: 52  DTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRR 111
              +  V   D+  F   D+ V++++  V  I G    +  ER D+   +     +F RR
Sbjct: 9   SDRDKFVIFLDVKHFSPEDLTVKVQEDFVE-IHG----KHNERQDDHGYIS---REFHRR 60

Query: 112 FQLPENAMVDRITAHI-ANSTLTVTVPKKDIKKHHGHS-RSIKIT 154
           ++LP N     ++  + A+  LT + PK       GHS R+I ++
Sbjct: 61  YRLPSNVDQSALSCSLSADGMLTFSGPKIPSGVDAGHSERAIPVS 105

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata} Length = 314

 Score = 63.7 bits (154), Expect = 6e-13
 Identities = 21/135 (15%), Positives = 36/135 (26%), Gaps = 5/135 (3%)

Query: 4   ISRSRFAGAVGYHHPPFPLSDDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADL 63
           I                            +          +        + + H+     
Sbjct: 183 IEAPVNEPNYKAIKLSPEKGLAIQPSEVQERQLAVKNKEGLEIVTAEDGSKKIHLELKVD 242

Query: 64  SGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRI 123
             F   DVKV  +  +V  + G     KEE+T+          +F + F  PE     + 
Sbjct: 243 PHFAPKDVKVWAKGNKV-YVHGVTG--KEEKTENASH--SEHREFYKAFVTPEVVDASKT 297

Query: 124 TAHIANSTLTVTVPK 138
            A I +  + V  P 
Sbjct: 298 QAEIVDGLMVVEAPL 312

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata} Length = 314

 Score = 50.2 bits (119), Expect = 3e-08
 Identities = 14/122 (11%), Positives = 38/122 (31%), Gaps = 14/122 (11%)

Query: 31  QFQHVYQFSPPMMIPTRIDWHDTPE----CHVFKADLSGFHKHDVKVEIEDGRVLCISGE 86
           +F    +++ P  +    D ++  +          ++  F   ++ ++ +    L +  +
Sbjct: 84  EFHPELEYTQPGELDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADK-NKLVVRAQ 142

Query: 87  KKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHI-ANSTLTVTVPKKDIKKHH 145
           K +   +                R   LP +   + I A I  +  L +  P  +     
Sbjct: 143 KSVACGDAAMSES--------VGRSIPLPPSVDRNHIQATITTDDVLVIEAPVNEPNYKA 194

Query: 146 GH 147
             
Sbjct: 195 IK 196

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	156
1gme_A	151	Heat shock protein 16.9B; small heat shock protein	99.98
3gla_A	100	Low molecular weight heat shock protein; HSPA, SHP	99.96
4eld_A	161	MJ16.5-P1, small heat shock protein HSP16.5; chape	99.95
4fei_A	102	Heat shock protein-related protein; stress respons	99.94
3aab_A	123	Putative uncharacterized protein ST1653; alpha-cry	99.92
3l1e_A	106	Alpha-crystallin A chain; lens transparency, polyd	99.92
2wj5_A	101	Heat shock protein beta-6; chaperone, disulfide bo	99.92
3q9p_A	85	Heat shock protein beta-1; alpha-crystallin domain	99.9
2klr_A	175	Alpha-crystallin B chain; protein, dimer, oligomer	99.89
2y1y_A	90	Alpha-crystallin B chain,; small heat shock protei	99.89
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	99.86
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	99.83
1rl1_A	114	Suppressor of G2 allele of SKP1 homolog; beta sand	99.09
2xcm_C	92	SGT1-like protein, cytosolic heat shock protein 90	99.08
3eud_A	115	Protein SHQ1; CS domain HSP20-like domain SHQ1 H/A	98.53
2k8q_A	134	Protein SHQ1; beta-sandwich, CS domain, nucleus, s	98.52
3igf_A	374	ALL4481 protein; two-domained protein consisting o	98.45
1x5m_A	127	Calcyclin-binding protein; CS domain, structural g	98.09
1wh0_A	134	Ubiquitin carboxyl-terminal hydrolase 19; USP, CS	98.04
1ejf_A	125	Progesterone receptor P23; chaperone, CO-chaperone	97.83
1wgv_A	124	KIAA1068 protein; CS domain, HSP20-like fold, stru	97.8
1wfi_A	131	Nuclear distribution gene C homolog; NUDC, riken s	97.72
2o30_A	131	Nuclear movement protein; MCSG, structural genomic	97.6
3qor_A	121	Nuclear migration protein NUDC; beta-sandwich, cha	97.59
2rh0_A	157	NUDC domain-containing protein 2; 13542905, nuclea	97.56
2kmw_A	150	Uncharacterized protein AT3G03773; protein structu	97.44
2cg9_X	134	CO-chaperone protein SBA1; chaperone complex, HSP9	97.22
4fei_A	102	Heat shock protein-related protein; stress respons	88.7
3q9p_A	85	Heat shock protein beta-1; alpha-crystallin domain	84.45
3gla_A	100	Low molecular weight heat shock protein; HSPA, SHP	81.97

>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A

Probab=99.98  E-value=3.5e-32  Score=198.83  Aligned_cols=142  Identities=47%  Similarity=0.793  Sum_probs=116.3

Q ss_pred             CCcccccccCCcCCCCCCCCCCCcCCcCCccccccc----cCC-----CCCCCCccceEEeCCCeEEEEEEeCCCCCCCe
Q 031640            1 MSQISRSRFAGAVGYHHPPFPLSDDTWNGGQFQHVY----QFS-----PPMMIPTRIDWHDTPECHVFKADLSGFHKHDV   71 (156)
Q Consensus         1 m~~~~r~~~~~~~~~~~~~~p~~~~~~d~d~f~~~~----~~~-----~~~~~~p~~di~e~~~~y~i~~~lPG~~~edi   71 (156)
                      ||++.|...         +.||+ ++|+ |||..|.    ++.     ....+.|+++|+|++++|+|.++|||+++++|
T Consensus         1 ms~~~~~~~---------~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~di~e~~d~~~v~~dlPGv~kedI   69 (151)
T 1gme_A            1 MSIVRRSNV---------FDPFA-DLWA-DPFDTFRSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVKKEEV   69 (151)
T ss_dssp             -CCCCSCCC---------BCTTC-GGGS-SHHHHHHHHGGGTTSSCCSHHHHGGGCEEEEECSSEEEEEEECTTCCGGGE
T ss_pred             Ccccccccc---------cCchH-hhhh-chhhhhhhhcccccccccccccccCCceEEEEcCCEEEEEEECCCCChHHE
Confidence            787755332         24666 8894 2775442    111     12346789999999999999999999999999


Q ss_pred             EEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEeCCEEEEEEeccCCCCCCCCceEE
Q 031640           72 KVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSI  151 (156)
Q Consensus        72 ~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~~~~~~~~~~~~I  151 (156)
                      +|++++++.|+|+|+++.+.+.++..|+++|+.+|+|.|+|.||.+|+.++|+|+|+||+|+|++||.++.++  ..++|
T Consensus        70 ~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~~~~~~--~~~~I  147 (151)
T 1gme_A           70 KVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKP--EVKAI  147 (151)
T ss_dssp             EEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEEEEETTEEEEEEECCCCCTT--CCCCC
T ss_pred             EEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceEEEEECCEEEEEEEccCcCCC--CCeEe
Confidence            9999644699999999887777778999999999999999999999999999999999999999999887665  66889


Q ss_pred             Eeee
Q 031640          152 KITG  155 (156)
Q Consensus       152 ~I~~  155 (156)
                      +|+|
T Consensus       148 ~I~~  151 (151)
T 1gme_A          148 QISG  151 (151)
T ss_dssp             CCCC
T ss_pred             eeCC
Confidence            9875

>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A

Probab=99.96  E-value=2.1e-28  Score=166.98  Aligned_cols=98  Identities=34%  Similarity=0.540  Sum_probs=91.5

Q ss_pred             CCCccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCc
Q 031640           43 MIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDR  122 (156)
Q Consensus        43 ~~~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~  122 (156)
                      .+.|++||.|+++.|+|.++|||+++++|+|++++ +.|+|+|+++.+...++..|+++|+.+|+|.|+|.||.++|.++
T Consensus         2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~   80 (100)
T 3gla_A            2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDK-GILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADG   80 (100)
T ss_dssp             CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEET-TEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTS
T ss_pred             CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEEC-CEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHH
Confidence            36789999999999999999999999999999997 59999999998877778899999999999999999999999999


Q ss_pred             eEEEEeCCEEEEEEeccCC
Q 031640          123 ITAHIANSTLTVTVPKKDI  141 (156)
Q Consensus       123 i~A~~~~GvL~I~~pK~~~  141 (156)
                      |+|+|+||+|+|++||.++
T Consensus        81 i~A~~~~GvL~I~~pK~~~   99 (100)
T 3gla_A           81 ITAAGRNGVLEIRIPKRPA   99 (100)
T ss_dssp             CEEEEETTEEEEEEEBC--
T ss_pred             eEEEEeCCEEEEEEecCCC
Confidence            9999999999999999875

>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A

Probab=99.95  E-value=3.5e-28  Score=179.23  Aligned_cols=104  Identities=19%  Similarity=0.229  Sum_probs=96.0

Q ss_pred             ccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEee-eeeeEEEEEECCCCcccCceE
Q 031640           46 TRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEV-AVGKFSRRFQLPENAMVDRIT  124 (156)
Q Consensus        46 p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~-~~~~f~r~~~LP~~vd~~~i~  124 (156)
                      +++||.|++++|+|.++|||++++||+|++++ +.|+|+|+++.+...++..++++|+ .+|+|.|+|.||.+||.++|+
T Consensus        57 ~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~-~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~  135 (161)
T 4eld_A           57 MPISIIEGDQHIKVIAWLPGVNKEDIILNAVG-DTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENAS  135 (161)
T ss_dssp             CCEEEEECSSEEEEEEECTTCCGGGEEEEEET-TEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCE
T ss_pred             cceeEEEeCCEEEEEEECCCCChHhEEEEEEC-CEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEE
Confidence            34999999999999999999999999999998 5999999998876666778999999 999999999999999999999


Q ss_pred             EEEeCCEEEEEEeccCCCCCCCCceEEEee
Q 031640          125 AHIANSTLTVTVPKKDIKKHHGHSRSIKIT  154 (156)
Q Consensus       125 A~~~~GvL~I~~pK~~~~~~~~~~~~I~I~  154 (156)
                      |+|+||+|+|++||.+..++    ++|+|+
T Consensus       136 A~~~nGvL~I~lpK~~~~~~----r~I~Ie  161 (161)
T 4eld_A          136 AKFENGVLSVILPKAESSIK----KGINIE  161 (161)
T ss_dssp             EEEETTEEEEEEEBCGGGSC----CCCCCC
T ss_pred             EEEECCEEEEEEEcCCCCCC----cEeecC
Confidence            99999999999999887776    888874

>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}

Probab=99.94  E-value=8e-27  Score=159.91  Aligned_cols=95  Identities=24%  Similarity=0.291  Sum_probs=87.6

Q ss_pred             CCCccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCc
Q 031640           43 MIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDR  122 (156)
Q Consensus        43 ~~~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~  122 (156)
                      .+.|++||.|++++|+|.++|||+++++|+|++++ +.|+|+|+++.     ..+++++|+.+|+|.|+|.||.+++.++
T Consensus         4 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~-----~~~~~~~er~~g~f~R~~~LP~~vd~~~   77 (102)
T 4fei_A            4 PWTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDG-GQLTVSGERPG-----TEHLLRSERPSGRFVRELAFPEPVRPAS   77 (102)
T ss_dssp             ECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEET-TEEEEEEEECC-----CSSCSSCCSEEEEEEEEEECSSCBCTTC
T ss_pred             cccCcEEEEEcCCEEEEEEECCCCchHhEEEEEEC-CEEEEEEEEec-----CCCEEEEEEeccEEEEEEECCCCcchhH
Confidence            46799999999999999999999999999999997 59999999854     3567888999999999999999999999


Q ss_pred             eEEEEeCCEEEEEEeccCCCC
Q 031640          123 ITAHIANSTLTVTVPKKDIKK  143 (156)
Q Consensus       123 i~A~~~~GvL~I~~pK~~~~~  143 (156)
                      |+|+|+||+|+|++||.++..
T Consensus        78 i~A~~~~GvL~I~lpK~~~~~   98 (102)
T 4fei_A           78 GVASLAGGVLTVRFEKLRPTI   98 (102)
T ss_dssp             CEEEEETTEEEEEEEBSSCCC
T ss_pred             cEEEEECCEEEEEEEccCccc
Confidence            999999999999999987654

>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A

Probab=99.92  E-value=7.5e-25  Score=154.70  Aligned_cols=94  Identities=22%  Similarity=0.314  Sum_probs=86.6

Q ss_pred             CCccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCce
Q 031640           44 IPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRI  123 (156)
Q Consensus        44 ~~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i  123 (156)
                      +.|+++|.|++++|.|.++|||+++++|+|++++++.|+|+|+++.+.   +.+|+++|+.+ +|.|+|.||.+++.++|
T Consensus        23 ~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~---~~~~~~~Er~~-~f~R~~~LP~~vd~~~i   98 (123)
T 3aab_A           23 VYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITE---PGVKYLTQRPK-YVRKVIRLPYNVAKDAE   98 (123)
T ss_dssp             HCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCC---CSCEEEECSCS-EEEEEEECSSEECTTCC
T ss_pred             CCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccC---CCeEEEEEEeE-EEEEEEECCCCcCcchh
Confidence            458999999999999999999999999999999724999999987654   56899999999 99999999999999999


Q ss_pred             -EEEEeCCEEEEEEeccCC
Q 031640          124 -TAHIANSTLTVTVPKKDI  141 (156)
Q Consensus       124 -~A~~~~GvL~I~~pK~~~  141 (156)
                       +|+|+||+|+|++||.+.
T Consensus        99 ~~A~~~~GvL~I~lPK~~~  117 (123)
T 3aab_A           99 ISGKYENGVLTIRIPIAGT  117 (123)
T ss_dssp             CEEEEETTEEEEEEEGGGE
T ss_pred             CeeEEcCCEEEEEEEcCCC
Confidence             999999999999999765

>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A

Probab=99.92  E-value=2.3e-24  Score=148.73  Aligned_cols=100  Identities=20%  Similarity=0.326  Sum_probs=84.1

Q ss_pred             cceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEE
Q 031640           47 RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAH  126 (156)
Q Consensus        47 ~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~  126 (156)
                      ..+|+|+++.|.|.++|||++++||+|++++ +.|+|+|+++....  ...|+++     .|.|+|.||.+||.++|+|+
T Consensus         4 ~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~~--~~~~~~~-----eF~R~~~LP~~vd~~~i~A~   75 (106)
T 3l1e_A            4 ISEVRSDRDKFVIFLDVKHFSPEDLTVKVQE-DFVEIHGKHNERQD--DHGYISR-----EFHRRYRLPSNVDQSALSCS   75 (106)
T ss_dssp             SEEEEECSSEEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEEEET--TTEEEEE-----EEEEEEECCTTBCTTSCEEE
T ss_pred             ceEEEEcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEccccC--CCCEEEE-----EEEEEEECCCCcChhHcEEE
Confidence            4699999999999999999999999999998 59999999875432  2345443     49999999999999999999


Q ss_pred             E-eCCEEEEEEeccCCCCC-CCCceEEEee
Q 031640          127 I-ANSTLTVTVPKKDIKKH-HGHSRSIKIT  154 (156)
Q Consensus       127 ~-~~GvL~I~~pK~~~~~~-~~~~~~I~I~  154 (156)
                      | +||+|+|++||.++... ..+.++|+|+
T Consensus        76 ~s~~GvL~I~~PK~~~~~~~~~~~r~I~I~  105 (106)
T 3l1e_A           76 LSADGMLTFSGPKIPSGVDAGHSERAIPVS  105 (106)
T ss_dssp             ECTTSEEEEEEEBCCCCTTTTSSSCCCCCC
T ss_pred             ECCCCEEEEEEEccCcccccCCCCeEeeec
Confidence            9 89999999999887520 0155889885

>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}

Probab=99.92  E-value=1.2e-24  Score=148.88  Aligned_cols=96  Identities=13%  Similarity=0.187  Sum_probs=81.8

Q ss_pred             cceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEE
Q 031640           47 RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAH  126 (156)
Q Consensus        47 ~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~  126 (156)
                      .+||+|+++.|.|.++|||++++||+|++++ +.|+|+|+++.+.  ++.+|+++|     |.|+|.||.+||.++|+|+
T Consensus         3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~~~--~~~~~~~~e-----F~R~~~LP~~vd~~~i~A~   74 (101)
T 2wj5_A            3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVG-DHVEVHARHEERP--DEHGFIARE-----FHRRYRLPPGVDPAAVTSA   74 (101)
T ss_dssp             CCCCCCCSSCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEECS--STTCCEEEE-----EEEEEECCTTBCTTCCEEE
T ss_pred             cEEEEEeCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEeccc--CCCCEEEEE-----EEEEEECCCCcChhHCEEE
Confidence            4789999999999999999999999999997 5999999997653  234565554     9999999999999999999


Q ss_pred             E-eCCEEEEEEeccCCCCCCCCceEEEee
Q 031640          127 I-ANSTLTVTVPKKDIKKHHGHSRSIKIT  154 (156)
Q Consensus       127 ~-~~GvL~I~~pK~~~~~~~~~~~~I~I~  154 (156)
                      | +||+|+|++||.+..++    +.+.|+
T Consensus        75 ~s~nGvL~I~lPK~~~~~~----~~~~i~   99 (101)
T 2wj5_A           75 LSPEGVLSIQATPASAQAS----LPSPPA   99 (101)
T ss_dssp             ECTTSEEEEEECBCCCCCS----SCC---
T ss_pred             ECCCCEEEEEEECCCcCCC----CCCccc
Confidence            9 89999999999988777    555543

>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A

Probab=99.90  E-value=2.6e-23  Score=138.00  Aligned_cols=83  Identities=22%  Similarity=0.386  Sum_probs=69.6

Q ss_pred             EEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEe-
Q 031640           50 WHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIA-  128 (156)
Q Consensus        50 i~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~-  128 (156)
                      +.|++++|.|.++|||+++++|+|++++ +.|+|+|+++.....  ..     ..+++|.|+|.||.+||.++|+|+|+ 
T Consensus         2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~~~--~~-----~~~~~F~R~~~LP~~vd~~~i~A~~~~   73 (85)
T 3q9p_A            2 GSHTADRWRVSLDVNHFAPDELTVKTKD-GVVEITGKHAARQDE--HG-----YISRCFTRKYTLPPGVDPTQVSSSLSP   73 (85)
T ss_dssp             -CCCCCEEEEEEECTTTCCSEEEEEEET-TEEEEEEEEC--------------CCCEEEEEEEECCTTCCGGGCEEEECT
T ss_pred             ccCcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEccccCC--CC-----EEEEEEEEEEECCCCcChHHcEEEECC
Confidence            4588999999999999999999999998 599999998765432  11     24678999999999999999999998 


Q ss_pred             CCEEEEEEeccC
Q 031640          129 NSTLTVTVPKKD  140 (156)
Q Consensus       129 ~GvL~I~~pK~~  140 (156)
                      ||+|+|++||.+
T Consensus        74 ~GvL~I~lPK~k   85 (85)
T 3q9p_A           74 EGTLTVEAPMPK   85 (85)
T ss_dssp             TSEEEEEEECCC
T ss_pred             CCEEEEEEEcCC
Confidence            999999999963

>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A

Probab=99.89  E-value=6.6e-23  Score=152.88  Aligned_cols=98  Identities=20%  Similarity=0.347  Sum_probs=72.7

Q ss_pred             cceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEE
Q 031640           47 RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAH  126 (156)
Q Consensus        47 ~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~  126 (156)
                      .++|.|++++|.|.++|||++++||+|++++ +.|+|+|+++.+.+  +.+++++     .|.|+|.||.+||.++|+|+
T Consensus        65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~~~~--~~~~~~r-----eF~R~~~LP~~Vd~~~i~A~  136 (175)
T 2klr_A           65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEERQD--EHGFISR-----EFHRKYRIPADVDPLTITSS  136 (175)
T ss_dssp             ----CCCCSEEEEEECCSSCCGGGEEEEEET-TEEEEEEEEEEEEE--TTEEEEE-----EEEEEEECTTTCCTTTCEEE
T ss_pred             ceEEEEcCCeEEEEEECCCCChHHEEEEEEC-CEEEEEEEEccccc--CCceEEE-----EEEEEEECCCCcChhHeEEE
Confidence            3699999999999999999999999999998 59999999876542  3455554     39999999999999999999


Q ss_pred             E-eCCEEEEEEeccCCCCCCCCceEEEeee
Q 031640          127 I-ANSTLTVTVPKKDIKKHHGHSRSIKITG  155 (156)
Q Consensus       127 ~-~~GvL~I~~pK~~~~~~~~~~~~I~I~~  155 (156)
                      | +||+|+|++||.+..+   ..++|+|+.
T Consensus       137 ~s~dGvL~I~lPK~~~~~---~~r~I~I~~  163 (175)
T 2klr_A          137 LSSDGVLTVNGPRKQVSG---PERTIPITR  163 (175)
T ss_dssp             ECTTSCEEEEEECC----------------
T ss_pred             EcCCCEEEEEEECCCCCC---CCeEEEEec
Confidence            9 7999999999976543   247888864

>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A

Probab=99.89  E-value=1.9e-22  Score=135.08  Aligned_cols=85  Identities=19%  Similarity=0.337  Sum_probs=69.1

Q ss_pred             eCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEE-eCC
Q 031640           52 DTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHI-ANS  130 (156)
Q Consensus        52 e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~-~~G  130 (156)
                      ++++.|+|.++|||++++||+|++.+ +.|+|+|+++...  ++..|+++     .|.|+|.||.+|+.++|+|.| +||
T Consensus         3 ~~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~--~~~~~~~~-----ef~R~~~LP~~vd~~~i~A~~~~~G   74 (90)
T 2y1y_A            3 MEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEERQ--DEHGFISR-----EFHRKYRIPADVDPLTITSSMSSDG   74 (90)
T ss_dssp             ---CCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEEEE--CSSSEEEE-----EEEEEEECCTTBCGGGCEEEECTTS
T ss_pred             cCCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEeccc--CCCCEEEE-----EEEEEEECCCCcChhHcEEEECCCC
Confidence            67899999999999999999999997 5999999987653  34456554     499999999999999999999 899


Q ss_pred             EEEEEEeccCCCCC
Q 031640          131 TLTVTVPKKDIKKH  144 (156)
Q Consensus       131 vL~I~~pK~~~~~~  144 (156)
                      +|+|++||.+..++
T Consensus        75 vL~I~~pK~~~~~p   88 (90)
T 2y1y_A           75 VLTVNGPRKQVSGP   88 (90)
T ss_dssp             EEEEEECBC-----
T ss_pred             EEEEEEEcCCCCCC
Confidence            99999999887665

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}

Probab=99.86  E-value=2.5e-21  Score=155.92  Aligned_cols=92  Identities=13%  Similarity=0.236  Sum_probs=82.1

Q ss_pred             CCCccceEEeCCC----eEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCc
Q 031640           43 MIPTRIDWHDTPE----CHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENA  118 (156)
Q Consensus        43 ~~~p~~di~e~~~----~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~v  118 (156)
                      .+.|++||+|+++    +|.|.++|||+++++|+|++++ +.|+|+|+++.+.+.        .+.+|+|.|+|.||.+|
T Consensus        96 ~~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~-~~L~I~ge~~~~~e~--------~r~~g~F~R~~~LP~~V  166 (314)
T 2bol_A           96 ELDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADK-NKLVVRAQKSVACGD--------AAMSESVGRSIPLPPSV  166 (314)
T ss_dssp             TTGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEET-TEEEEEECCBSSTTC--------CCBCCCEEEEEECCTTB
T ss_pred             cCCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEEC-CEEEEEEEEeccCCC--------CEEEEEEEEEEECCCCc
Confidence            3568999999999    9999999999999999999998 599999998754321        16789999999999999


Q ss_pred             ccCceEEEEe-CCEEEEEEeccCCCC
Q 031640          119 MVDRITAHIA-NSTLTVTVPKKDIKK  143 (156)
Q Consensus       119 d~~~i~A~~~-~GvL~I~~pK~~~~~  143 (156)
                      +.++|+|+|+ ||||+|++||.++..
T Consensus       167 d~e~i~A~~~~nGVL~I~lPK~~~~~  192 (314)
T 2bol_A          167 DRNHIQATITTDDVLVIEAPVNEPNY  192 (314)
T ss_dssp             CGGGCEEEECSSSEEEEEEEBSSCCT
T ss_pred             cccccEEEEeCCCEEEEEEeccCccc
Confidence            9999999999 999999999987654

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}

Probab=99.83  E-value=1.1e-20  Score=152.18  Aligned_cols=89  Identities=17%  Similarity=0.218  Sum_probs=70.0

Q ss_pred             ccceEEeCC---CeEEEEEEe-CCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccC
Q 031640           46 TRIDWHDTP---ECHVFKADL-SGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVD  121 (156)
Q Consensus        46 p~~di~e~~---~~y~i~~~l-PG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~  121 (156)
                      ...+|.+++   +.|.|.++| ||++++||+|++++ +.|+|+|+++.+.+    .++++|+.+|+|.|+|.||++||.+
T Consensus       221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~-~~LtI~ge~~~~~~----~~~~~Er~~g~F~R~~~LP~~vd~~  295 (314)
T 2bol_A          221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKG-NKVYVHGVTGKEEK----TENASHSEHREFYKAFVTPEVVDAS  295 (314)
T ss_dssp             CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESS-SEEEEEEEEC----------------CEEEEEEEECSSEECGG
T ss_pred             CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEEC-CEEEEEEEEeccCC----ceEEEEEeeeEEEEEEECCCCcChH
Confidence            345666654   479999999 99999999999997 69999999886543    4688899999999999999999999


Q ss_pred             ceEEEEeCCEEEEEEecc
Q 031640          122 RITAHIANSTLTVTVPKK  139 (156)
Q Consensus       122 ~i~A~~~~GvL~I~~pK~  139 (156)
                      +|+|+|+||||+|++||.
T Consensus       296 ~i~A~~~dGvL~i~~Pk~  313 (314)
T 2bol_A          296 KTQAEIVDGLMVVEAPLF  313 (314)
T ss_dssp             GCEEEEETTEEEEEEEEE
T ss_pred             HeEEEEeCCEEEEEEecC
Confidence            999999999999999985

>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3

Probab=99.09  E-value=4e-10  Score=77.66  Aligned_cols=82  Identities=16%  Similarity=0.269  Sum_probs=71.4

Q ss_pred             CCccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCce
Q 031640           44 IPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRI  123 (156)
Q Consensus        44 ~~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i  123 (156)
                      ..+.+++.++++.+.|.+.+||++++++.|.+++ +.|.|++....               ...|...+.|+..|+++..
T Consensus         8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~-~~l~v~~~~~~---------------~~~y~~~~~L~~~I~~e~s   71 (114)
T 1rl1_A            8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSE-KELSALVKLPS---------------GEDYNLKLELLHPIIPEQS   71 (114)
T ss_dssp             CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSS-SCEEEEEECTT---------------SSEEEEEECBSSCCCGGGE
T ss_pred             CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEc-CEEEEEEEeCC---------------CcEEEEEeeCCCcCCcccc
Confidence            4567899999999999999999999999999998 58999976421               1247788899999999999


Q ss_pred             EEEEeCCEEEEEEeccCC
Q 031640          124 TAHIANSTLTVTVPKKDI  141 (156)
Q Consensus       124 ~A~~~~GvL~I~~pK~~~  141 (156)
                      ++++.+|.|+|+|+|++.
T Consensus        72 ~~~~~~~~l~i~L~K~~~   89 (114)
T 1rl1_A           72 TFKVLSTKIEIKLKKPEA   89 (114)
T ss_dssp             EEEECSSSEEEEEECSSC
T ss_pred             EEEEECCEEEEEEEcCCC
Confidence            999999999999999765

>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*

Probab=99.08  E-value=4e-10  Score=74.59  Aligned_cols=82  Identities=17%  Similarity=0.257  Sum_probs=71.0

Q ss_pred             CccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceE
Q 031640           45 PTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRIT  124 (156)
Q Consensus        45 ~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~  124 (156)
                      .+++++.++++.+.|.+.+||+.++++.|.+++ +.|.|++....               ...|...+.|+..|+++..+
T Consensus         2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~-~~l~v~~~~~~---------------~~~y~~~~~L~~~I~~~~s~   65 (92)
T 2xcm_C            2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGE-QILSVVIEVPG---------------EDAYYLQPRLFGKIIPDKCK   65 (92)
T ss_dssp             CSEEEEEEETTEEEEEEECCSCCGGGEEEEECS-SBEEEEECCTT---------------SCCEEECCBBSSCBCGGGCE
T ss_pred             CccccEEeCCCEEEEEEEECCCChHHeEEEEEC-CEEEEEEEcCC---------------CcEEEEeeEcCCccCchhEE
Confidence            467899999999999999999999999999998 58999875321               12477788999999999999


Q ss_pred             EEEeCCEEEEEEeccCCC
Q 031640          125 AHIANSTLTVTVPKKDIK  142 (156)
Q Consensus       125 A~~~~GvL~I~~pK~~~~  142 (156)
                      +++.+|.|+|+|+|.++.
T Consensus        66 ~~~~~~~l~i~L~K~~~~   83 (92)
T 2xcm_C           66 YEVLSTKIEICLAKADII   83 (92)
T ss_dssp             EEECSSCEEEEEEBSSSC
T ss_pred             EEEECCEEEEEEEcCCCC
Confidence            999999999999998754

>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}

Probab=98.53  E-value=2e-06  Score=58.99  Aligned_cols=81  Identities=19%  Similarity=0.282  Sum_probs=69.4

Q ss_pred             CCCCccceEEeCCCeEEEEEEeCCCC--CCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCC-c
Q 031640           42 MMIPTRIDWHDTPECHVFKADLSGFH--KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPEN-A  118 (156)
Q Consensus        42 ~~~~p~~di~e~~~~y~i~~~lPG~~--~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~-v  118 (156)
                      .+..|.+.|..+++...|.+.+|-+.  ..++++.+++ +.+....                    ..|.-++.||.. +
T Consensus        14 ~~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~-~~F~F~~--------------------~PYyLRL~lP~~vv   72 (115)
T 3eud_A           14 KMITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHL--------------------SPYYLRLRFPHELI   72 (115)
T ss_dssp             CCBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEET-TEEEEEE--------------------TTEEEEEECSSCEE
T ss_pred             CEeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeC-CEEEEec--------------------CCeEEEEecCccee
Confidence            46789999999999999999999876  7899999997 6888873                    346778999999 4


Q ss_pred             ccCceEEEE--eCCEEEEEEeccCCCC
Q 031640          119 MVDRITAHI--ANSTLTVTVPKKDIKK  143 (156)
Q Consensus       119 d~~~i~A~~--~~GvL~I~~pK~~~~~  143 (156)
                      +-+..+|+|  ++|.++|++||....+
T Consensus        73 ed~~~~A~YD~d~g~~~v~lpK~~~GE   99 (115)
T 3eud_A           73 DDERSTAQYDSKDECINVKVAKLNKNE   99 (115)
T ss_dssp             CSTTCEEEEETTTTEEEEEEEESSTTC
T ss_pred             cCCCcceEEeCCCcEEEEEEcCCcCCC
Confidence            778899999  6999999999987654

>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}

Probab=98.52  E-value=2.6e-07  Score=65.32  Aligned_cols=79  Identities=18%  Similarity=0.275  Sum_probs=68.2

Q ss_pred             CCccceEEeCCCeEEEEEEeCCCC--CCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCc-cc
Q 031640           44 IPTRIDWHDTPECHVFKADLSGFH--KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENA-MV  120 (156)
Q Consensus        44 ~~p~~di~e~~~~y~i~~~lPG~~--~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~v-d~  120 (156)
                      ..|.+.+..+++..+|.+.+|..+  ..++++.+++ +.+....                    ..|.-++.||..| +.
T Consensus         2 iTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~-~~F~F~~--------------------~PYyLRL~LP~~V~e~   60 (134)
T 2k8q_A            2 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHL--------------------SPYYLRLRFPHELIDD   60 (134)
T ss_dssp             CCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECS-SSEEECS--------------------SSSCEEECCSSCEECC
T ss_pred             cCceEEEEECCCEEEEEEEcCccccCccccEEEEeC-CEEEEec--------------------CCeEEEecCCCeeecC
Confidence            468899999999999999999999  8999999997 6888873                    2466779999996 88


Q ss_pred             CceEEEE--eCCEEEEEEeccCCCC
Q 031640          121 DRITAHI--ANSTLTVTVPKKDIKK  143 (156)
Q Consensus       121 ~~i~A~~--~~GvL~I~~pK~~~~~  143 (156)
                      +..+|+|  +.|.|+|++||....+
T Consensus        61 ~~~kA~YD~d~~~~~VtLpK~~~Ge   85 (134)
T 2k8q_A           61 ERSTAQYDSKDECINVKVAKLNKNE   85 (134)
T ss_dssp             SSCEEEEETTTTEEEEEEEESSTTC
T ss_pred             CCcceeEeccCCEEEEEEeCCCCCC
Confidence            8899999  5999999999977654

>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}

Probab=98.45  E-value=6.6e-07  Score=73.43  Aligned_cols=71  Identities=21%  Similarity=0.252  Sum_probs=60.1

Q ss_pred             CccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccC-ce
Q 031640           45 PTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVD-RI  123 (156)
Q Consensus        45 ~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~-~i  123 (156)
                      ..++.|.+.  .|.+++.|||+++++|++...++ .|+|+                    .|.|+|.+.||.....- -.
T Consensus       297 ~~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~gd-eL~v~--------------------~g~~rR~i~LP~~L~~~~v~  353 (374)
T 3igf_A          297 PKPITIDTH--NRQVRLFLPGFDKKQVKLTQYGP-EVTVE--------------------AGDQRRNIFLPPALSGRPIT  353 (374)
T ss_dssp             CCSEEEETT--TTEEEEECTTCCGGGCEEEEETT-EEEEE--------------------ETTEEEEEECCTTTTTCCEE
T ss_pred             CCCEEEEec--cEEEEEECCCCCHHHeEEEEECC-eEEEE--------------------ECCEeecccCCHHHcCCCcc
Confidence            345555444  89999999999999999999976 99999                    67899999999985544 58


Q ss_pred             EEEEeCCEEEEEEec
Q 031640          124 TAHIANSTLTVTVPK  138 (156)
Q Consensus       124 ~A~~~~GvL~I~~pK  138 (156)
                      .|+|+||.|+|++-.
T Consensus       354 ~A~~~~~~L~i~~~~  368 (374)
T 3igf_A          354 GAKFQNNYLIISFLE  368 (374)
T ss_dssp             EEEEETTEEEEEECC
T ss_pred             ccEEECCEEEEEEeh
Confidence            899999999999864

>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.09  E-value=6e-05  Score=52.58  Aligned_cols=82  Identities=15%  Similarity=0.200  Sum_probs=67.7

Q ss_pred             CccceEEeCCCeEEEEEEeCCC---CCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEE-CCCCccc
Q 031640           45 PTRIDWHDTPECHVFKADLSGF---HKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQ-LPENAMV  120 (156)
Q Consensus        45 ~p~~di~e~~~~y~i~~~lPG~---~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~-LP~~vd~  120 (156)
                      .+.+++..+.+...|.+.++|+   .++++.|.+.+ +.|.|.+....     +          ..|.-.+. |-..|++
T Consensus        20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~-~~l~v~~~~~~-----~----------~~y~~~~~~L~~~I~~   83 (127)
T 1x5m_A           20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTE-RSFDLLVKNLN-----G----------KSYSMIVNNLLKPISV   83 (127)
T ss_dssp             CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECS-SEEEEEECSCS-----S----------SCEEEEEECBSSCCCT
T ss_pred             ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEc-CEEEEEEEcCC-----C----------CcEEEEhHHhcCccCc
Confidence            3578999999999999999999   89999999998 58999863211     1          13556675 8899999


Q ss_pred             CceEEEEeCCEEEEEEeccCCC
Q 031640          121 DRITAHIANSTLTVTVPKKDIK  142 (156)
Q Consensus       121 ~~i~A~~~~GvL~I~~pK~~~~  142 (156)
                      +..+..+..+.++|+|.|++..
T Consensus        84 e~S~~~v~~~kVei~L~K~~~~  105 (127)
T 1x5m_A           84 EGSSKKVKTDTVLILCRKKVEN  105 (127)
T ss_dssp             TTCEEEEETTEEEEEEECSSSS
T ss_pred             ccCEEEEeCCEEEEEEEECCCC
Confidence            9999999999999999998753

>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3

Probab=98.04  E-value=4.2e-05  Score=54.12  Aligned_cols=91  Identities=13%  Similarity=0.172  Sum_probs=69.9

Q ss_pred             CccceEEeC-CCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeee---eEEEEEECCCCccc
Q 031640           45 PTRIDWHDT-PECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVG---KFSRRFQLPENAMV  120 (156)
Q Consensus        45 ~p~~di~e~-~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~---~f~r~~~LP~~vd~  120 (156)
                      .++++|+++ .+...|.+.++++.++++.|.+.+ +.|.|+........      ++.--..|   .|.-.+.|-..|++
T Consensus        19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~-~~l~v~~~~~~~~~------l~~~~a~g~~~~y~~~~~L~~~I~p   91 (134)
T 1wh0_A           19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFRE-QDFTLIFQTRDGNF------LRLHPGCGPHTTFRWQVKLRNLIEP   91 (134)
T ss_dssp             CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECS-SEEEEEECBCCHHH------HHHSTTCCTTSCEEEEEEBSSCEEE
T ss_pred             CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEEC-CEEEEEEEcCCCcc------cccccccCcceeEEEeccccccCCc
Confidence            578999999 999999999999999999999998 58999865322110      00000001   36667789999999


Q ss_pred             CceEEEEeCCEEEEEEeccCCC
Q 031640          121 DRITAHIANSTLTVTVPKKDIK  142 (156)
Q Consensus       121 ~~i~A~~~~GvL~I~~pK~~~~  142 (156)
                      +..+.++..+.++|+|.|++..
T Consensus        92 e~S~~~v~~~kIeI~L~K~e~~  113 (134)
T 1wh0_A           92 EQCTFCFTASRIDICLRKRQSQ  113 (134)
T ss_dssp             EEEEEEECSSEEEEEEEESSSC
T ss_pred             hhCEEEEeCCEEEEEEEECCCC
Confidence            9999999999999999998653

>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2

Probab=97.83  E-value=0.00013  Score=50.70  Aligned_cols=79  Identities=14%  Similarity=0.122  Sum_probs=65.6

Q ss_pred             ccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEE
Q 031640           46 TRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITA  125 (156)
Q Consensus        46 p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A  125 (156)
                      |.+++..+.+.+.|++.+|+.  +++.|.++. +.|.+++.....    +          ..|.-.+.|-..|+++..+.
T Consensus         4 ~~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~-~~l~~~~~~~~~----~----------~~y~~~l~L~~~I~~e~S~~   66 (125)
T 1ejf_A            4 ASAKWYDRRDYVFIEFCVEDS--KDVNVNFEK-SKLTFSCLGGSD----N----------FKHLNEIDLFHCIDPNDSKH   66 (125)
T ss_dssp             CCEEEEECSSEEEEEECCTTE--EEEEEEEET-TEEEEEEEETTT----T----------EEEEEEEEBSSCEEEEEEEE
T ss_pred             CceeEEeCCCEEEEEEEecCC--CceEEEEEC-CEEEEEEEeCCC----C----------ceEEEEEEccceeccccCEE
Confidence            479999999999999999996  799999998 599998764111    0          13667788999999999999


Q ss_pred             EEeCCEEEEEEeccCC
Q 031640          126 HIANSTLTVTVPKKDI  141 (156)
Q Consensus       126 ~~~~GvL~I~~pK~~~  141 (156)
                      ++.+..++|+|.|+++
T Consensus        67 ~v~~~kiei~L~K~~~   82 (125)
T 1ejf_A           67 KRTDRSILCCLRKGES   82 (125)
T ss_dssp             EECSSCEEEEEEESST
T ss_pred             EECCCEEEEEEEECCC
Confidence            9988999999999864

>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4

Probab=97.80  E-value=0.00032  Score=48.66  Aligned_cols=83  Identities=7%  Similarity=0.096  Sum_probs=66.1

Q ss_pred             CCCccceEEeCCCeEEEEEEeC-CC-CCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCccc
Q 031640           43 MIPTRIDWHDTPECHVFKADLS-GF-HKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMV  120 (156)
Q Consensus        43 ~~~p~~di~e~~~~y~i~~~lP-G~-~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~  120 (156)
                      ...|.+.+..+.+...|++.|| |+ +.+++.|.+.. +.|.|..+..     .+.          .+.-...|...|++
T Consensus        17 ~~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~-~~l~v~~~~~-----~~~----------~~~~~~~L~~~I~~   80 (124)
T 1wgv_A           17 AVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSS-SSIRVAMLEE-----NGE----------RVLMEGKLTHKINT   80 (124)
T ss_dssp             BCCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECS-SEEEEEEECS-----SSE----------EEEEEEEBSSCBCT
T ss_pred             CcCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEc-CEEEEEEEcc-----CCC----------ceEEcccccCcCCC
Confidence            3457899999999999999999 88 89999999998 5999986421     010          12234679999999


Q ss_pred             CceEEEEeCCE-EEEEEeccCC
Q 031640          121 DRITAHIANST-LTVTVPKKDI  141 (156)
Q Consensus       121 ~~i~A~~~~Gv-L~I~~pK~~~  141 (156)
                      +..+-.++++. |.|+|.|.+.
T Consensus        81 e~S~w~i~~~k~v~i~L~K~~~  102 (124)
T 1wgv_A           81 ESSLWSLEPGKCVLVNLSKVGE  102 (124)
T ss_dssp             TTCEEEECTTSEEEEEECBSSS
T ss_pred             cCCEEEEeCCCEEEEEEEECCC
Confidence            99999998885 9999999753

>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4

Probab=97.72  E-value=0.00037  Score=48.73  Aligned_cols=80  Identities=18%  Similarity=0.159  Sum_probs=64.5

Q ss_pred             CCCccceEEeCCCeEEEEEEeC-C--CCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcc
Q 031640           43 MIPTRIDWHDTPECHVFKADLS-G--FHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAM  119 (156)
Q Consensus        43 ~~~p~~di~e~~~~y~i~~~lP-G--~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd  119 (156)
                      ...|.+.+..+.+...|++.|| |  ++.+++.|.+.. +.|.|..+..        .          ..-...|...|+
T Consensus         5 ~~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~--------~----------~~~~~~L~~~I~   65 (131)
T 1wfi_A            5 SSGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQR-RHLRVGLKGQ--------P----------PVVDGELYNEVK   65 (131)
T ss_dssp             SSCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEET-TEEEEEETTS--------C----------CSBCSCBSSCBC
T ss_pred             CCCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeC-CEEEEEECCc--------e----------EEEecccccccc
Confidence            4557899999999999999999 6  899999999998 5999985310        0          001235788899


Q ss_pred             cCceEEEEeCC-EEEEEEeccCC
Q 031640          120 VDRITAHIANS-TLTVTVPKKDI  141 (156)
Q Consensus       120 ~~~i~A~~~~G-vL~I~~pK~~~  141 (156)
                      ++..+-.+++| .|.|+|-|.+.
T Consensus        66 ~e~s~w~i~~~k~v~i~L~K~~~   88 (131)
T 1wfi_A           66 VEESSWLIEDGKVVTVHLEKINK   88 (131)
T ss_dssp             STTCEEEEETTTEEEEEEEBSSS
T ss_pred             cccCEEEEcCCCEEEEEEEECCC
Confidence            99999999998 89999999764

>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}

Probab=97.60  E-value=0.00083  Score=46.95  Aligned_cols=77  Identities=13%  Similarity=0.211  Sum_probs=61.2

Q ss_pred             CCccceEEeCCCeEEEEEEeC-CCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCc
Q 031640           44 IPTRIDWHDTPECHVFKADLS-GFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDR  122 (156)
Q Consensus        44 ~~p~~di~e~~~~y~i~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~  122 (156)
                      ..|.+.+..+.+...|.+.|| |++.+++.|.+.. +.|.|.++        +.          . .-...|...|+++.
T Consensus         3 ~~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~-~~l~v~~~--------g~----------~-~~~~~L~~~I~~e~   62 (131)
T 2o30_A            3 SEAKYTWDQELNEINIQFPVTGDADSSAIKIRMVG-KKICVKNQ--------GE----------I-VIDGELLHEVDVSS   62 (131)
T ss_dssp             --CCCEEEEETTEEEEEEECC---CCSCEEEEEET-TEEEEEET--------TE----------E-EEEEEBSSCEEEEE
T ss_pred             CCCcEEEEecCCEEEEEEECCCCCCccceEEEEEC-CEEEEEEC--------CE----------e-eEcccccccccccc
Confidence            347899999999999999996 8999999999998 59999852        10          0 12457888999999


Q ss_pred             eEEEEeCCEEEEEEeccC
Q 031640          123 ITAHIANSTLTVTVPKKD  140 (156)
Q Consensus       123 i~A~~~~GvL~I~~pK~~  140 (156)
                      .+-.++++.|.|+|-|..
T Consensus        63 S~w~i~~~kv~i~L~K~~   80 (131)
T 2o30_A           63 LWWVINGDVVDVNVTKKR   80 (131)
T ss_dssp             EEEEEETTEEEEEEEESS
T ss_pred             CEEEEeCCEEEEEEEECC
Confidence            999999999999999973

>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A

Probab=97.59  E-value=0.00078  Score=46.52  Aligned_cols=81  Identities=17%  Similarity=0.140  Sum_probs=64.9

Q ss_pred             CCCCccceEEeCCCeEEEEEEeC-C--CCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCc
Q 031640           42 MMIPTRIDWHDTPECHVFKADLS-G--FHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENA  118 (156)
Q Consensus        42 ~~~~p~~di~e~~~~y~i~~~lP-G--~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~v  118 (156)
                      +...+.+.+..+.+.+.|++.|| |  ++.+++.|.+.. +.|.|..+-.        .          +.-...|...|
T Consensus        13 G~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~--------~----------~~~~g~L~~~I   73 (121)
T 3qor_A           13 GADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQR-RHLRVGLKGQ--------P----------AIIDGELYNEV   73 (121)
T ss_dssp             SCBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEET-TEEEEEETTS--------C----------CSEEEEBSSCB
T ss_pred             CCcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEc-CEEEEEEcCc--------c----------eEEeccccccc
Confidence            34557899999999999999999 4  789999999998 5888864210        0          11244788899


Q ss_pred             ccCceEEEEeCC-EEEEEEeccCC
Q 031640          119 MVDRITAHIANS-TLTVTVPKKDI  141 (156)
Q Consensus       119 d~~~i~A~~~~G-vL~I~~pK~~~  141 (156)
                      +++...-.+++| .|.|+|-|.+.
T Consensus        74 ~~deS~w~i~~~~~i~i~L~K~~~   97 (121)
T 3qor_A           74 KVEESSWLIADGAVVTVHLEKINK   97 (121)
T ss_dssp             CGGGCEEEEETTTEEEEEEEBSSS
T ss_pred             cccccEEEEcCCCEEEEEEEECCC
Confidence            999999999998 99999999764

>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}

Probab=97.56  E-value=0.001  Score=48.10  Aligned_cols=78  Identities=13%  Similarity=0.209  Sum_probs=64.4

Q ss_pred             CCccceEEeCCCeEEEEEEeC-CCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCc
Q 031640           44 IPTRIDWHDTPECHVFKADLS-GFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDR  122 (156)
Q Consensus        44 ~~p~~di~e~~~~y~i~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~  122 (156)
                      ..+.+.+..+.+.+.|++.|| |++.++|.|.+.. +.|.|..+        +.          .+ -...|...|+++.
T Consensus        12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~-~~L~v~~k--------g~----------~~-l~g~L~~~I~~ee   71 (157)
T 2rh0_A           12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQS-RHVALAVG--------GR----------EI-LKGKLFDSTIADE   71 (157)
T ss_dssp             ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECS-SEEEEEET--------TE----------EE-EEEEBSSCBCGGG
T ss_pred             CCCcEEEEecCCEEEEEEECCCCCcccceEEEEec-CEEEEEEC--------CE----------EE-EeeccccccCccc
Confidence            347899999999999999998 8999999999998 59999852        10          01 3457889999999


Q ss_pred             eEEEEeCCE-EEEEEeccCC
Q 031640          123 ITAHIANST-LTVTVPKKDI  141 (156)
Q Consensus       123 i~A~~~~Gv-L~I~~pK~~~  141 (156)
                      .+-+++++. |.|+|-|.+.
T Consensus        72 S~w~i~~~k~v~I~L~K~~~   91 (157)
T 2rh0_A           72 GTWTLEDRKMVRIVLTKTKR   91 (157)
T ss_dssp             CEEEEECCCEEEEEEEBSSC
T ss_pred             cEEEEcCCcEEEEEEEEcCC
Confidence            999998885 9999999865

>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}

Probab=97.44  E-value=0.00027  Score=50.84  Aligned_cols=79  Identities=13%  Similarity=0.254  Sum_probs=64.5

Q ss_pred             CCccceEEeCCCeEEEEEEeCCCCCCCeEEEEe-CCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCc
Q 031640           44 IPTRIDWHDTPECHVFKADLSGFHKHDVKVEIE-DGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDR  122 (156)
Q Consensus        44 ~~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~-~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~  122 (156)
                      ..|.+++..+.+.+.|+|.++++  ++++|.++ + +.|.+++. .  ..  +          ..|.-.+.|-..|+++ 
T Consensus         3 ~~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~-~~l~~~~~-~--~~--~----------~~y~~~l~L~~~Idpe-   63 (150)
T 2kmw_A            3 RNPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQ-GLFSFSAL-G--AQ--G----------ERFEFSLELYGKIMTE-   63 (150)
T ss_dssp             ECCCEEEEECSSEEEEEECCSSE--EEEEECCCTT-EEEEEEEE-T--TT--T----------EEEEEEEEBSSCEEEE-
T ss_pred             cCCcEEEEeCCCEEEEEEEeCCC--CceEEEEecC-CEEEEEEE-c--CC--C----------ceEEEEeEhhhccccc-
Confidence            35789999999999999999998  57899998 6 58999986 1  11  1          1366778898889999 


Q ss_pred             eEEEEeCCEEEEEEeccCC
Q 031640          123 ITAHIANSTLTVTVPKKDI  141 (156)
Q Consensus       123 i~A~~~~GvL~I~~pK~~~  141 (156)
                      .+.+.....++|+|.|+++
T Consensus        64 S~~~v~~~kIei~L~K~e~   82 (150)
T 2kmw_A           64 YRKNVGLRNIIFSIQKEER   82 (150)
T ss_dssp             EEEEEESSSEEEEEEECCS
T ss_pred             ceEEecCCEEEEEEEECCC
Confidence            8888888889999999764

>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}

Probab=97.22  E-value=0.00016  Score=50.95  Aligned_cols=85  Identities=13%  Similarity=0.285  Sum_probs=58.7

Q ss_pred             CCccceEEeCCCe-------EEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCC
Q 031640           44 IPTRIDWHDTPEC-------HVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPE  116 (156)
Q Consensus        44 ~~p~~di~e~~~~-------y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~  116 (156)
                      ..|.+.+..+.+.       +.|++.+|+++  ++.|.++. +.|.+++..........         ...|.-.+.|..
T Consensus         5 ~~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~-~~l~~~~~~~~~~g~~~---------~~~y~~~l~L~~   72 (134)
T 2cg9_X            5 INPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKP-SYIELKAQSKPHVGDEN---------VHHYQLHIDLYK   72 (134)
T ss_dssp             ------CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCS-SEEEECCEEC----------------CEEBCEEEECSS
T ss_pred             cCCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEEC-CEEEEEEecccccCCcc---------CceEEEEEEChh
Confidence            3466777777655       99999999974  88889987 59999876432100000         013667789999


Q ss_pred             CcccCceEEEEeCCE-EEEEEeccC
Q 031640          117 NAMVDRITAHIANST-LTVTVPKKD  140 (156)
Q Consensus       117 ~vd~~~i~A~~~~Gv-L~I~~pK~~  140 (156)
                      .|+++..+..+.++. |.|+|.|++
T Consensus        73 ~Idpe~S~~~v~~~~~vei~L~K~~   97 (134)
T 2cg9_X           73 EIIPEKTMHKVANGQHYFLKLYKKD   97 (134)
T ss_dssp             CCCSSSEEEEECCC--CEEEEEECS
T ss_pred             hccccccEEEECCCEEEEEEEEECC
Confidence            999999999999998 999999987

>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}

Probab=88.70  E-value=2  Score=27.96  Aligned_cols=51  Identities=12%  Similarity=0.053  Sum_probs=37.3

Q ss_pred             CCCCCCccceEEeCCCeEEE----------------------EEEeC-CCCCCCeEEEEeCCcEEEEEEEEeccc
Q 031640           40 PPMMIPTRIDWHDTPECHVF----------------------KADLS-GFHKHDVKVEIEDGRVLCISGEKKIEK   91 (156)
Q Consensus        40 ~~~~~~p~~di~e~~~~y~i----------------------~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~~   91 (156)
                      .++...-.++|.-+++.+.|                      .+.|| +++.+.++-++++| .|+|+..+....
T Consensus        24 lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~~~G-vL~I~lpK~~~~   97 (102)
T 4fei_A           24 VPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASLAGG-VLTVRFEKLRPT   97 (102)
T ss_dssp             CTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEEETT-EEEEEEEBSSCC
T ss_pred             CCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEEECC-EEEEEEEccCcc
Confidence            35555556666666665555                      57899 68999999999997 999998765543

>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A

Probab=84.45  E-value=2.5  Score=26.55  Aligned_cols=33  Identities=9%  Similarity=0.205  Sum_probs=28.6

Q ss_pred             eEEEEEECCCCcccCceEEEEeCCEEEEEEeccC
Q 031640          107 KFSRRFQLPENAMVDRITAHIANSTLTVTVPKKD  140 (156)
Q Consensus       107 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~~  140 (156)
                      .|.-.+.|| +++++.|+-.+++|.|+|..-+..
T Consensus         8 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~   40 (85)
T 3q9p_A            8 RWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAA   40 (85)
T ss_dssp             EEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC-
T ss_pred             EEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence            477888998 799999999999999999987654

>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A

Probab=81.97  E-value=6.3  Score=25.18  Aligned_cols=32  Identities=19%  Similarity=0.158  Sum_probs=26.2

Q ss_pred             eEEEEEEeC-CCCCCCeEEEEeCCcEEEEEEEEe
Q 031640           56 CHVFKADLS-GFHKHDVKVEIEDGRVLCISGEKK   88 (156)
Q Consensus        56 ~y~i~~~lP-G~~~edi~V~v~~~~~L~I~g~~~   88 (156)
                      .|.-.+.|| +++.+.++-++++| .|+|+..+.
T Consensus        65 ~f~r~~~LP~~vd~~~i~A~~~~G-vL~I~~pK~   97 (100)
T 3gla_A           65 SFHRRFALPDSADADGITAAGRNG-VLEIRIPKR   97 (100)
T ss_dssp             EEEEEEECCTTBCTTSCEEEEETT-EEEEEEEBC
T ss_pred             EEEEEEECCCCcChHHeEEEEeCC-EEEEEEecC
Confidence            455578898 58999999999997 999997654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	156
d1gmea_	150	b.15.1.1 (A:) Small heat shock protein {Wheat (Tri	3e-25
d1shsa_	115	b.15.1.1 (A:) Small heat shock protein {Archaeon M	2e-15

>d1gmea_ b.15.1.1 (A:) Small heat shock protein {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 150

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score = 92.1 bits (228), Expect = 3e-25
 Identities = 59/132 (44%), Positives = 82/132 (62%), Gaps = 2/132 (1%)

Query: 24  DDTWNGGQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCI 83
           D   +                  R+DW +TPE HVFKADL G  K +VKVE+EDG VL +
Sbjct: 21  DTFRSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVV 80

Query: 84  SGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKK 143
           SGE+  EKE++ D+ HR+E + GKF RRF+L E+A V+ + A + N  LTVTVPK ++KK
Sbjct: 81  SGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKK 140

Query: 144 HHGHSRSIKITG 155
                ++I+I+G
Sbjct: 141 P--EVKAIQISG 150

>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 115

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 65.8 bits (160), Expect = 2e-15
 Identities = 18/106 (16%), Positives = 35/106 (33%), Gaps = 4/106 (3%)

Query: 48  IDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGK 107
           I   +  +     A L G +K D+ +      +   +    +   E     +       +
Sbjct: 13  ISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEE 72

Query: 108 FSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIKI 153
             R  +LP     +  +A   N  L+V +PK +        + I I
Sbjct: 73  IYRTIKLPATVKEENASAKFENGVLSVILPKAESSI----KKGINI 114

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	156
d1gmea_	150	Small heat shock protein {Wheat (Triticum aestivum	99.97
d1shsa_	115	Small heat shock protein {Archaeon Methanococcus j	99.93
d1rl1a_	92	Suppressor of G2 allele of skp1 homolog, gst1 {Hum	98.52
d1ejfa_	110	Co-chaperone p23 {Human (Homo sapiens) [TaxId: 960	97.86
d1wh0a_	134	Ubiquitin carboxyl-terminal hydrolase 19, USP19 {H	97.53
d1wfia_	131	Nuclear migration protein nudC {Mouse (Mus musculu	97.28
d1wgva_	124	NudC domain containing protein 3, NUDCD3 (KIAA1068	96.98
d1rl6a1	75	Ribosomal protein L6 {Bacillus stearothermophilus	88.15
d1vqoe1	79	Ribosomal protein L6 {Archaeon Haloarcula marismor	85.87

>d1gmea_ b.15.1.1 (A:) Small heat shock protein {Wheat (Triticum aestivum) [TaxId: 4565]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Wheat (Triticum aestivum) [TaxId: 4565]

Probab=99.97  E-value=1.6e-32  Score=198.66  Aligned_cols=141  Identities=46%  Similarity=0.788  Sum_probs=116.9

Q ss_pred             CcccccccCCcCCCCCCCCCCCcCCcCCccccccccC---------CCCCCCCccceEEeCCCeEEEEEEeCCCCCCCeE
Q 031640            2 SQISRSRFAGAVGYHHPPFPLSDDTWNGGQFQHVYQF---------SPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVK   72 (156)
Q Consensus         2 ~~~~r~~~~~~~~~~~~~~p~~~~~~d~d~f~~~~~~---------~~~~~~~p~~di~e~~~~y~i~~~lPG~~~edi~   72 (156)
                      ||++|+.++         .||+. +|+ |||+.|...         .......|+++|.|++++|+|+++|||++++||+
T Consensus         1 ~l~rr~~~f---------DpF~d-~~~-d~f~~~~~~~~~~~~~~~~~~~~~~p~~dv~e~~~~~~i~~~lPG~~~edi~   69 (150)
T d1gmea_           1 SIVRRSNVF---------DPFAD-LWA-DPFDTFRSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVKKEEVK   69 (150)
T ss_dssp             CCCCSCCCB---------CTTCG-GGS-SHHHHHHHHGGGTTSSCCSHHHHGGGCEEEEECSSEEEEEEECTTCCGGGEE
T ss_pred             CCcccCCCc---------CCchh-hhh-chhhhhhhhhhccccccccccccCCCceeEEECCCEEEEEEEeCCCccCCEE
Confidence            456666543         47764 554 277655222         1122345889999999999999999999999999


Q ss_pred             EEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEeCCEEEEEEeccCCCCCCCCceEEE
Q 031640           73 VEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIK  152 (156)
Q Consensus        73 V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~~~~~~~~~~~~I~  152 (156)
                      |++++++.|+|+|++..+...++..++.+|+.+|+|+|+|.||.+||.++|+|+|+||+|+|++||.++.++  +.++|+
T Consensus        70 v~v~~~~~l~i~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~lpK~~~~~~--~~~~I~  147 (150)
T d1gmea_          70 VEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKP--EVKAIQ  147 (150)
T ss_dssp             EEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEEEEETTEEEEEEECCCCCTT--CCCCCC
T ss_pred             EEEEEccceeEEEEEecccccccceeeeeeeccceEEEEEECCCCeeeceeEEEEECCEEEEEEEcCCcCCC--CceEEe
Confidence            999876689999998888777788999999999999999999999999999999999999999999988877  778999


Q ss_pred             eee
Q 031640          153 ITG  155 (156)
Q Consensus       153 I~~  155 (156)
                      |+|
T Consensus       148 I~g  150 (150)
T d1gmea_         148 ISG  150 (150)
T ss_dssp             CCC
T ss_pred             ccC
Confidence            886

>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.93  E-value=6.6e-26  Score=156.57  Aligned_cols=106  Identities=18%  Similarity=0.167  Sum_probs=92.9

Q ss_pred             CCccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccE-EEEeeeeeeEEEEEECCCCcccCc
Q 031640           44 IPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEG-HRLEVAVGKFSRRFQLPENAMVDR  122 (156)
Q Consensus        44 ~~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~-~~~e~~~~~f~r~~~LP~~vd~~~  122 (156)
                      ..+++||.|+++.|.|.++|||+++++|+|++++ +.|+|+|++......+...+ +..++..|.|.|+|.||.++|.++
T Consensus         9 ~~~pvdi~e~~~~~~i~~~lPG~~~edi~v~v~~-~~l~I~~~~~~~~~~~~~~~~~~~~~~~~~f~r~~~lP~~vd~~~   87 (115)
T d1shsa_           9 GFMPISIIEGDQHIKVIAWLPGVNKEDIILNAVG-DTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEEN   87 (115)
T ss_dssp             SCCCEEEEECSSEEEEEEECTTCCGGGEEEEEET-TEEEEEEECCCCCCCTTCEEEEECSCCCCEEEEEEECSSCBCGGG
T ss_pred             CcCceEEEEcCCEEEEEEECCCCCHHHEEEEEEC-CEEEEEEEeccccccccccEEEEeeecccceEEEEecCCceeecc
Confidence            4467999999999999999999999999999998 59999999877665554444 455677899999999999999999


Q ss_pred             eEEEEeCCEEEEEEeccCCCCCCCCceEEEee
Q 031640          123 ITAHIANSTLTVTVPKKDIKKHHGHSRSIKIT  154 (156)
Q Consensus       123 i~A~~~~GvL~I~~pK~~~~~~~~~~~~I~I~  154 (156)
                      ++|.|+||+|+|++||.++.++    ++|+|+
T Consensus        88 i~A~~~nGvL~I~lpK~~~~~~----~~I~Ie  115 (115)
T d1shsa_          88 ASAKFENGVLSVILPKAESSIK----KGINIE  115 (115)
T ss_dssp             CEEEEETTEEEEEEEBCGGGCC----EECCCC
T ss_pred             eEEEEECCEEEEEEEeCCCCCC----ceeeeC
Confidence            9999999999999999887666    888875

>d1rl1a_ b.15.1.3 (A:) Suppressor of G2 allele of skp1 homolog, gst1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: GS domain
domain: Suppressor of G2 allele of skp1 homolog, gst1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=2.6e-07  Score=59.40  Aligned_cols=82  Identities=16%  Similarity=0.280  Sum_probs=68.6

Q ss_pred             CccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceE
Q 031640           45 PTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRIT  124 (156)
Q Consensus        45 ~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~  124 (156)
                      ..++++.++++...|.+.+||+.++++.|.+.+ +.|.+.......               ..|.-.+.|...|+++..+
T Consensus         2 k~ry~W~Qt~~~V~i~i~~~~~~~~~v~v~~~~-~~l~v~~~~~~~---------------~~y~~~~~L~~~I~p~~s~   65 (92)
T d1rl1a_           2 KIKYDWYQTESQVVITLMIKNVQKNDVNVEFSE-KELSALVKLPSG---------------EDYNLKLELLHPIIPEQST   65 (92)
T ss_dssp             CCCEEEEECSSEEEEEECCCSCCGGGEEEECSS-SCEEEEEECTTS---------------SEEEEEECBSSCCCGGGEE
T ss_pred             CCceeEEeCCCEEEEEEEeCCCChHheEEEEec-CEEEEEEEcCCC---------------cEEEEEEEcCcccCchhcE
Confidence            356899999999999999999999999999997 588888642111               1356677899999999999


Q ss_pred             EEEeCCEEEEEEeccCCC
Q 031640          125 AHIANSTLTVTVPKKDIK  142 (156)
Q Consensus       125 A~~~~GvL~I~~pK~~~~  142 (156)
                      ..+.++.|.|+|.|+++.
T Consensus        66 ~~~~~~kiei~L~K~~~~   83 (92)
T d1rl1a_          66 FKVLSTKIEIKLKKPEAV   83 (92)
T ss_dssp             EEECSSSEEEEEECSSCC
T ss_pred             EEEeCCEEEEEEEECCCC
Confidence            999999999999998654

>d1ejfa_ b.15.1.2 (A:) Co-chaperone p23 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: Co-chaperone p23-like
domain: Co-chaperone p23
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=6.4e-05  Score=49.35  Aligned_cols=81  Identities=15%  Similarity=0.143  Sum_probs=65.6

Q ss_pred             CCccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCce
Q 031640           44 IPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRI  123 (156)
Q Consensus        44 ~~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i  123 (156)
                      .++++.+..+.+...|++.+|+.  .+++|.++. +.|.+++......              ..|.-.+.|...|+++..
T Consensus         2 ~p~~~~W~Qt~~~V~i~I~v~~~--~~~~v~i~~-~~l~~~~~~~~~~--------------~~y~l~~~L~~~I~~~~s   64 (110)
T d1ejfa_           2 QPASAKWYDRRDYVFIEFCVEDS--KDVNVNFEK-SKLTFSCLGGSDN--------------FKHLNEIDLFHCIDPNDS   64 (110)
T ss_dssp             BCCCEEEEECSSEEEEEECCTTE--EEEEEEEET-TEEEEEEEETTTT--------------EEEEEEEEBSSCEEEEEE
T ss_pred             CCCCcEEEECCCEEEEEEEeCCC--CCceEEEEe-ceEEEEEEecCCC--------------ceEEEEEEcccCcccCcc
Confidence            35678999999999999999985  578888887 5888887643221              135567789999999999


Q ss_pred             EEEEeCCEEEEEEeccCC
Q 031640          124 TAHIANSTLTVTVPKKDI  141 (156)
Q Consensus       124 ~A~~~~GvL~I~~pK~~~  141 (156)
                      +.+++++.|.|+|.|+++
T Consensus        65 ~~~v~~~kiei~L~K~~~   82 (110)
T d1ejfa_          65 KHKRTDRSILCCLRKGES   82 (110)
T ss_dssp             EEEECSSCEEEEEEESST
T ss_pred             EEEEeCCEEEEEEEEcCC
Confidence            999999999999999765

>d1wh0a_ b.15.1.3 (A:) Ubiquitin carboxyl-terminal hydrolase 19, USP19 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: GS domain
domain: Ubiquitin carboxyl-terminal hydrolase 19, USP19
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=0.00049  Score=46.85  Aligned_cols=95  Identities=9%  Similarity=0.045  Sum_probs=70.3

Q ss_pred             CccceEEeCC-CeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCce
Q 031640           45 PTRIDWHDTP-ECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRI  123 (156)
Q Consensus        45 ~p~~di~e~~-~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i  123 (156)
                      ..+-++++++ +...|.+.+.|+.++++.|.+.+ +.|.|+-.......-   .+...-.....|.-.+.|-..|+++..
T Consensus        19 ~ir~dwyq~~~~~V~VtI~~K~v~ke~~~V~f~~-~sl~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~L~~~I~pe~S   94 (134)
T d1wh0a_          19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFRE-QDFTLIFQTRDGNFL---RLHPGCGPHTTFRWQVKLRNLIEPEQC   94 (134)
T ss_dssp             CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECS-SEEEEEECBCCHHHH---HHSTTCCTTSCEEEEEEBSSCEEEEEE
T ss_pred             ccccceeecCCCEEEEEEEeCCCchhheEEEEeC-CEEEEEEECCCCcce---eeccccCcCeeEEEeeecccccChhHc
Confidence            3466888874 78999999999999999999998 589988643221100   000000001247888999999999999


Q ss_pred             EEEEeCCEEEEEEeccCCCC
Q 031640          124 TAHIANSTLTVTVPKKDIKK  143 (156)
Q Consensus       124 ~A~~~~GvL~I~~pK~~~~~  143 (156)
                      +..+..+.++|+|.|++...
T Consensus        95 ~~~v~~~kiei~L~K~~~~~  114 (134)
T d1wh0a_          95 TFCFTASRIDICLRKRQSQR  114 (134)
T ss_dssp             EEEECSSEEEEEEEESSSCC
T ss_pred             EEEeCCCEEEEEEEeCCCCc
Confidence            99999999999999987644

>d1wfia_ b.15.1.4 (A:) Nuclear migration protein nudC {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: Nuclear movement domain
domain: Nuclear migration protein nudC
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.28  E-value=0.0017  Score=43.69  Aligned_cols=82  Identities=17%  Similarity=0.141  Sum_probs=61.5

Q ss_pred             CCCCCccceEEeCCCeEEEEEEeC---CCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCC
Q 031640           41 PMMIPTRIDWHDTPECHVFKADLS---GFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPEN  117 (156)
Q Consensus        41 ~~~~~p~~di~e~~~~y~i~~~lP---G~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~  117 (156)
                      .+...|.+.+.++.+...|.+.+|   ++++++|.|.+.. +.|.|..+...       .+         +  .-.|...
T Consensus         3 ~G~~~~~Y~W~Qt~~eV~I~V~~~~~~~~~~~di~v~i~~-~~l~v~v~~~~-------~l---------l--~g~L~~~   63 (131)
T d1wfia_           3 SGSSGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQR-RHLRVGLKGQP-------PV---------V--DGELYNE   63 (131)
T ss_dssp             CSSSCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEET-TEEEEEETTSC-------CS---------B--CSCBSSC
T ss_pred             CCCCCCCeEEEeeCCEEEEEEEcCCCCCcchhhEEEEeeC-CEEEEEEcCCc-------ee---------e--cccccCc
Confidence            345678999999999988888764   7899999999998 58888742110       01         0  1147788


Q ss_pred             cccCceEEEEeCC-EEEEEEeccCC
Q 031640          118 AMVDRITAHIANS-TLTVTVPKKDI  141 (156)
Q Consensus       118 vd~~~i~A~~~~G-vL~I~~pK~~~  141 (156)
                      |+++...-.+++| +|.|+|.|+..
T Consensus        64 I~~des~W~ied~~~l~i~L~K~~~   88 (131)
T d1wfia_          64 VKVEESSWLIEDGKVVTVHLEKINK   88 (131)
T ss_dssp             BCSTTCEEEEETTTEEEEEEEBSSS
T ss_pred             ccccccEEEEeCCCEEEEEEEECCC
Confidence            9998888888765 89999999654

>d1wgva_ b.15.1.4 (A:) NudC domain containing protein 3, NUDCD3 (KIAA1068) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: Nuclear movement domain
domain: NudC domain containing protein 3, NUDCD3 (KIAA1068)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.0076  Score=39.74  Aligned_cols=82  Identities=7%  Similarity=0.073  Sum_probs=60.1

Q ss_pred             CCccceEEeCCCeEEEEEEeCC--CCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccC
Q 031640           44 IPTRIDWHDTPECHVFKADLSG--FHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVD  121 (156)
Q Consensus        44 ~~p~~di~e~~~~y~i~~~lPG--~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~  121 (156)
                      ....+.+.++.+.+.|++.||.  .+.++|.|.+.. +.|.|+-.....               ..+.-...|...|+++
T Consensus        18 ~~~~Y~W~Qt~~~V~i~i~lp~~~~k~kdv~v~~~~-~~l~v~v~~~~~---------------~~~~l~g~L~~~I~~d   81 (124)
T d1wgva_          18 VRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSS-SSIRVAMLEENG---------------ERVLMEGKLTHKINTE   81 (124)
T ss_dssp             CCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECS-SEEEEEEECSSS---------------EEEEEEEEBSSCBCTT
T ss_pred             CCCCeEEEeECCEEEEEEEeCCCCcchhhEEEEEEe-CEEEEEEeccCC---------------cceEEeCcccCccccc
Confidence            3457899999999999999984  356899999998 488777432111               0133345799999999


Q ss_pred             ceEEEEeCC-EEEEEEeccCC
Q 031640          122 RITAHIANS-TLTVTVPKKDI  141 (156)
Q Consensus       122 ~i~A~~~~G-vL~I~~pK~~~  141 (156)
                      ...-.++++ +|.+.+.|...
T Consensus        82 eS~w~i~~~~~~i~~lkK~~~  102 (124)
T d1wgva_          82 SSLWSLEPGKCVLVNLSKVGE  102 (124)
T ss_dssp             TCEEEECTTSEEEEEECBSSS
T ss_pred             ccEEEEeCCCEEEEEEEecCC
Confidence            999999888 55556666554

>d1rl6a1 d.141.1.1 (A:7-81) Ribosomal protein L6 {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein L6
superfamily: Ribosomal protein L6
family: Ribosomal protein L6
domain: Ribosomal protein L6
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.15  E-value=0.82  Score=26.95  Aligned_cols=43  Identities=21%  Similarity=0.407  Sum_probs=31.5

Q ss_pred             CCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEeCCEEEEEE
Q 031640           68 KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTV  136 (156)
Q Consensus        68 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~  136 (156)
                      |++++|++++ +.|+|+|.                  .|+..+  .||.     .++...+|+.|.|..
T Consensus         5 P~gV~v~i~~-~~i~vkGp------------------kG~L~~--~~~~-----~v~i~~~~~~i~v~~   47 (75)
T d1rl6a1           5 PAGVTVTVNG-NTVTVKGP------------------KGELTR--TFHP-----DMTITVEGNVITVTR   47 (75)
T ss_dssp             CTTCEEEEET-TEEEEEET------------------TEEEEE--ECCT-----TCEEEEETTEEEEEC
T ss_pred             CCCcEEEEEC-CEEEEEeC------------------CEEEEE--eccC-----cEEEEEeCceEEEcc
Confidence            5899999997 69999986                  334433  4564     456788999888873

>d1vqoe1 d.141.1.1 (E:1-79) Ribosomal protein L6 {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein L6
superfamily: Ribosomal protein L6
family: Ribosomal protein L6
domain: Ribosomal protein L6
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=85.87  E-value=1.2  Score=26.46  Aligned_cols=44  Identities=23%  Similarity=0.364  Sum_probs=31.0

Q ss_pred             CCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEeCCEEEEEE
Q 031640           68 KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTV  136 (156)
Q Consensus        68 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~  136 (156)
                      +++++|++++ +.|+|+|.                  .|...+.  ||.    ..++...+++.|.|..
T Consensus         8 P~~V~v~i~~-~~i~vkGp------------------~G~L~~~--~~~----~~v~i~~~~~~i~v~~   51 (79)
T d1vqoe1           8 PEDVDAEQDH-LDITVEGD------------------NGSVTRR--LWY----PDIDVSVDGDTVVIES   51 (79)
T ss_dssp             CSSCEEEEET-TEEEEEET------------------TEEEEEE--CCC----TTCEEEECSSEEEEEC
T ss_pred             CCCcEEEEeC-CEEEEEcC------------------CeEEEEE--ccC----CeEEEEEcCCEEEecc
Confidence            4889999997 69999975                  3444444  342    3466788899887764