Citrus Sinensis ID: 031695

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-----
Protein Sequence
MAFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDVEIKYLVAAAIALKGIGGLLFIFGSSFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFIKFTQVSTYELSLSFSCNFYTMVFIYLFRIVNHGYD
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHcccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccEcccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccHHHEccccccccHHHHHHHHHHHHHHHHHccHHHHHHHcHHHEEEHHEEEccccc
Coil and Loop (DISEMBL)
MAFVSFVGRVLFASIFLLSAWQEFNefgvdggpaakslepkfhifskhvlshtgvqvpdVEIKYLVAAAIALKGIGGLLFIFGSSFGAYLLLLHQALATpilydfynydadkkEFGQIFIKFTQVSTYELSLSFSCNFYTMVFIYLFRIVNHGYD
Flexible Loop (DISEMBL)
MAFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDVEIKYLVAAAIALKGIGGLLFIFGSSFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFIKFTQVSTYELSLSFSCNFYTMVFIYLFRIVNHGYD
Low Complexity Region (SEG)
MAFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDVEIKYLVaaaialkgiggllfifgssfgaYLLLLHQALATPILYDFYNYDADKKEFGQIFIKFTQVSTYELSLSFSCNFYTMVFIYLFRIVNHGYD
Disordered region (IsUnstruct)
**FVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDVEIKYLVAAAIALKGIGGLLFIFGSSFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFIKFTQVSTYELSLSFSCNFYTMVFIYLFRIVNH***
Disordered Region (DISOPRED)
**FVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDVEIKYLVAAAIALKGIGGLLFIFGSSFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFIKFTQVSTYELSLSFSCNFYTMVFIYLFRIVNHG**
Disordered Region (DISEMBL)
MAFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDVEIKYLVAAAIALKGIGGLLFIFGSSFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFIKFTQVSTYELSLSFSCNFYTMVFIYLFRIVNHGYD
Disordered Region (DISPRO)
*AFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDVEIKYLVAAAIALKGIGGLLFIFGSSFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFIKFTQVSTYELSLSFSCNFYTMVFIYLFRIVNHGYD
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
Transmembrane Helix (HMMTOP)
oooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiii
Transmembrane Helix (MEMSAT)
iiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDVEIKYLVAAAIALKGIGGLLFIFGSSFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFIKFTQVSTYELSLSFSCNFYTMVFIYLFRIVNHGYD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	155
255576842	157	conserved hypothetical protein [Ricinus	0.8	0.789	0.830	6e-54
296083598	157	unnamed protein product [Vitis vinifera]	0.8	0.789	0.790	9e-51
225433007	230	PREDICTED: uncharacterized protein LOC10	0.8	0.539	0.790	1e-50
297800800	158	hypothetical protein ARALYDRAFT_915427 [	0.8	0.784	0.75	1e-48
15236497	158	HR-like lesion-inducing protein-like pro	0.8	0.784	0.75	1e-48
1762945	157	ORF; able to induce HR-like lesions [Nic	0.8	0.789	0.733	7e-48
1762939	138	ORF; able to induce HR-like lesions [Nic	0.8	0.898	0.733	1e-47
118482114	157	unknown [Populus trichocarpa]	0.8	0.789	0.758	2e-47
388496746	156	unknown [Lotus japonicus] gi|388500218|g	0.8	0.794	0.733	4e-47
224111008	157	predicted protein [Populus trichocarpa]	0.8	0.789	0.75	2e-46

>gi|255576842|ref|XP_002529307.1| conserved hypothetical protein [Ricinus communis] gi|223531231|gb|EEF33076.1| conserved hypothetical protein [Ricinus communis]

 Score =  215 bits (547), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 103/124 (83%), Positives = 115/124 (92%)

Query: 1   MAFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDV 60
           MAF SFVGRVLFAS+F+LSAWQEFN+FGVDGGPAAKS  PKF++FS+HV S+TG QVP V
Sbjct: 1   MAFASFVGRVLFASVFILSAWQEFNDFGVDGGPAAKSFAPKFNVFSRHVSSNTGFQVPPV 60

Query: 61  EIKYLVAAAIALKGIGGLLFIFGSSFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFI 120
           EIK+LVAAAIA+KG+GGLLFIFGSSFGAYLLLLHQA+ TPILYDFYNYDADKKEF Q+F 
Sbjct: 61  EIKHLVAAAIAVKGLGGLLFIFGSSFGAYLLLLHQAVVTPILYDFYNYDADKKEFHQLFT 120

Query: 121 KFTQ 124
           KFTQ
Sbjct: 121 KFTQ 124

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296083598|emb|CBI23587.3| unnamed protein product [Vitis vinifera]

 Score =  204 bits (519), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 98/124 (79%), Positives = 111/124 (89%)

Query: 1   MAFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDV 60
           MAFVSFVGRVLFAS+F+LSAWQEFNEFGVDGGPA +SL PK  +FSKHV ++ GVQVP+V
Sbjct: 1   MAFVSFVGRVLFASVFILSAWQEFNEFGVDGGPAVESLAPKLDVFSKHVSANVGVQVPEV 60

Query: 61  EIKYLVAAAIALKGIGGLLFIFGSSFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFI 120
           EIK LVAA+IALKG+GGLLFIFGSS GA+LLLLHQA+  PILYDFYNYD DKKEF  +F+
Sbjct: 61  EIKNLVAASIALKGLGGLLFIFGSSLGAHLLLLHQAIVIPILYDFYNYDVDKKEFVVLFL 120

Query: 121 KFTQ 124
           KFTQ
Sbjct: 121 KFTQ 124

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225433007|ref|XP_002284580.1| PREDICTED: uncharacterized protein LOC100245894 [Vitis vinifera]

 Score =  204 bits (518), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 98/124 (79%), Positives = 111/124 (89%)

Query: 1   MAFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDV 60
           MAFVSFVGRVLFAS+F+LSAWQEFNEFGVDGGPA +SL PK  +FSKHV ++ GVQVP+V
Sbjct: 74  MAFVSFVGRVLFASVFILSAWQEFNEFGVDGGPAVESLAPKLDVFSKHVSANVGVQVPEV 133

Query: 61  EIKYLVAAAIALKGIGGLLFIFGSSFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFI 120
           EIK LVAA+IALKG+GGLLFIFGSS GA+LLLLHQA+  PILYDFYNYD DKKEF  +F+
Sbjct: 134 EIKNLVAASIALKGLGGLLFIFGSSLGAHLLLLHQAIVIPILYDFYNYDVDKKEFVVLFL 193

Query: 121 KFTQ 124
           KFTQ
Sbjct: 194 KFTQ 197

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297800800|ref|XP_002868284.1| hypothetical protein ARALYDRAFT_915427 [Arabidopsis lyrata subsp. lyrata] gi|297314120|gb|EFH44543.1| hypothetical protein ARALYDRAFT_915427 [Arabidopsis lyrata subsp. lyrata]

 Score =  197 bits (501), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 93/124 (75%), Positives = 107/124 (86%)

Query: 1   MAFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDV 60
           M   SF+GR LF S+FLLSAWQEFN+FG DGG +AKSL+PKF+ F  HV +HTG Q+P V
Sbjct: 1   MELASFLGRALFVSVFLLSAWQEFNDFGEDGGRSAKSLKPKFNAFVNHVTTHTGQQLPPV 60

Query: 61  EIKYLVAAAIALKGIGGLLFIFGSSFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFI 120
           ++K LVAAAIALKGIGGLLF+FGSS GAYLLLLHQA+ATPILYDFYNYD D+KEFGQ+F 
Sbjct: 61  DMKILVAAAIALKGIGGLLFVFGSSLGAYLLLLHQAVATPILYDFYNYDVDRKEFGQLFS 120

Query: 121 KFTQ 124
           KFTQ
Sbjct: 121 KFTQ 124

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15236497|ref|NP_193178.1| HR-like lesion-inducing protein-like protein [Arabidopsis thaliana] gi|2244798|emb|CAB10221.1| elicitor like protein [Arabidopsis thaliana] gi|7268148|emb|CAB78484.1| elicitor like protein [Arabidopsis thaliana] gi|15010600|gb|AAK73959.1| AT4g14420/dl3250c [Arabidopsis thaliana] gi|19699242|gb|AAL90987.1| AT4g14420/dl3250c [Arabidopsis thaliana] gi|21553825|gb|AAM62918.1| elicitor like protein [Arabidopsis thaliana] gi|332658043|gb|AEE83443.1| HR-like lesion-inducing protein-like protein [Arabidopsis thaliana]

 Score =  197 bits (501), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 93/124 (75%), Positives = 107/124 (86%)

Query: 1   MAFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDV 60
           M   SF+GR LF S+FLLSAWQEFN+FG DGG +AKSL+PKF+ F  HV +HTG Q+P V
Sbjct: 1   MELASFLGRALFVSVFLLSAWQEFNDFGEDGGRSAKSLKPKFNAFVNHVTTHTGQQLPPV 60

Query: 61  EIKYLVAAAIALKGIGGLLFIFGSSFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFI 120
           ++K LVAAAIALKGIGGLLF+FGSS GAYLLLLHQA+ATPILYDFYNYD D+KEFGQ+F 
Sbjct: 61  DMKILVAAAIALKGIGGLLFVFGSSLGAYLLLLHQAVATPILYDFYNYDVDRKEFGQLFS 120

Query: 121 KFTQ 124
           KFTQ
Sbjct: 121 KFTQ 124

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1762945|gb|AAC49975.1| ORF; able to induce HR-like lesions [Nicotiana tabacum]

 Score =  195 bits (495), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 91/124 (73%), Positives = 109/124 (87%)

Query: 1   MAFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDV 60
           MAFVSF+GR LF S+F+LSA+QEF+EFG DGGPAAK+L PKF+IFSKHV +HTG QVP V
Sbjct: 1   MAFVSFLGRALFVSVFVLSAYQEFSEFGADGGPAAKALRPKFNIFSKHVATHTGFQVPHV 60

Query: 61  EIKYLVAAAIALKGIGGLLFIFGSSFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFI 120
           E+K+L+  AI +KG+G LLFIFGSS GAY+LLLHQA+A+PILYDFYNYD DKKEF Q+F 
Sbjct: 61  EMKHLILGAIVMKGLGSLLFIFGSSLGAYILLLHQAIASPILYDFYNYDVDKKEFVQLFF 120

Query: 121 KFTQ 124
           KF+Q
Sbjct: 121 KFSQ 124

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1762939|gb|AAC49972.1| ORF; able to induce HR-like lesions [Nicotiana tabacum]

 Score =  194 bits (493), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 91/124 (73%), Positives = 109/124 (87%)

Query: 1   MAFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDV 60
           MAFVSF+GR LF S+F+LSA+QEF+EFG DGGPAAK+L PKF+IFSKHV +HTG QVP V
Sbjct: 1   MAFVSFLGRALFVSVFVLSAYQEFSEFGADGGPAAKALRPKFNIFSKHVATHTGFQVPHV 60

Query: 61  EIKYLVAAAIALKGIGGLLFIFGSSFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFI 120
           E+K+L+  AI +KG+G LLFIFGSS GAY+LLLHQA+A+PILYDFYNYD DKKEF Q+F 
Sbjct: 61  EMKHLILGAIVMKGLGSLLFIFGSSLGAYILLLHQAIASPILYDFYNYDVDKKEFVQLFF 120

Query: 121 KFTQ 124
           KF+Q
Sbjct: 121 KFSQ 124

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118482114|gb|ABK92988.1| unknown [Populus trichocarpa]

 Score =  193 bits (490), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 94/124 (75%), Positives = 104/124 (83%)

Query: 1   MAFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDV 60
           MAFVSFVGRVLFAS+F+LSAWQEFNEFG +GGPAA  LEPKFH+FSKHV S TG QVP  
Sbjct: 1   MAFVSFVGRVLFASVFILSAWQEFNEFGTNGGPAAHLLEPKFHVFSKHVSSQTGFQVPHF 60

Query: 61  EIKYLVAAAIALKGIGGLLFIFGSSFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFI 120
           E+K+ VAAAI++K  G LLFIFGSS GAYLLLLHQ + TPILYDFYNYDAD KEF  +F 
Sbjct: 61  EMKHAVAAAISVKAFGSLLFIFGSSVGAYLLLLHQIIITPILYDFYNYDADTKEFNLLFA 120

Query: 121 KFTQ 124
           KF Q
Sbjct: 121 KFAQ 124

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388496746|gb|AFK36439.1| unknown [Lotus japonicus] gi|388500218|gb|AFK38175.1| unknown [Lotus japonicus]

 Score =  192 bits (488), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 91/124 (73%), Positives = 107/124 (86%)

Query: 1   MAFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDV 60
           MAF+SF+GRVLFAS+F+LSA+QEFNEFGVDGGPAAKSL PKF  F+  V S  G Q+P++
Sbjct: 1   MAFISFLGRVLFASVFILSAYQEFNEFGVDGGPAAKSLRPKFDTFTSRVHSQVGFQLPEI 60

Query: 61  EIKYLVAAAIALKGIGGLLFIFGSSFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFI 120
           +IK L+A AIALKG+GGLLFIFGSSFGA LLLLHQ +ATPI YDFYN+D + KEF Q+FI
Sbjct: 61  DIKVLIAGAIALKGVGGLLFIFGSSFGAVLLLLHQLIATPIRYDFYNFDNEDKEFAQLFI 120

Query: 121 KFTQ 124
           KFTQ
Sbjct: 121 KFTQ 124

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224111008|ref|XP_002315714.1| predicted protein [Populus trichocarpa] gi|222864754|gb|EEF01885.1| predicted protein [Populus trichocarpa]

 Score =  190 bits (483), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 93/124 (75%), Positives = 103/124 (83%)

Query: 1   MAFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDV 60
           MAFVSFVGRVLFAS+F+LSAWQEFNEFG +G PAA  LEPKFH+FSKHV S TG QVP  
Sbjct: 1   MAFVSFVGRVLFASVFILSAWQEFNEFGTNGEPAAHLLEPKFHVFSKHVSSQTGFQVPHF 60

Query: 61  EIKYLVAAAIALKGIGGLLFIFGSSFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFI 120
           E+K+ VAAAI++K  G LLFIFGSS GAYLLLLHQ + TPILYDFYNYDAD KEF  +F 
Sbjct: 61  EMKHAVAAAISVKAFGSLLFIFGSSVGAYLLLLHQIIITPILYDFYNYDADTKEFNLLFA 120

Query: 121 KFTQ 124
           KF Q
Sbjct: 121 KFAQ 124

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	155
TAIR|locus:2129720	158	AT4G14420 "AT4G14420" [Arabido	0.8	0.784	0.588	1.5e-35
TAIR|locus:2018364	159	AT1G04340 "AT1G04340" [Arabido	0.8	0.779	0.435	1.2e-24
TAIR|locus:2176476	154	AT5G43460 "AT5G43460" [Arabido	0.838	0.844	0.4	6.3e-21
TAIR|locus:2086248	216	AT3G23190 "AT3G23190" [Arabido	0.341	0.245	0.4	5.7e-13
TAIR|locus:2086238	217	AT3G23180 "AT3G23180" [Arabido	0.819	0.585	0.278	1.2e-10

TAIR|locus:2129720 AT4G14420 "AT4G14420" [Arabidopsis thaliana (taxid:3702)]

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 73/124 (58%), Positives = 86/124 (69%)

Query:     1 MAFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDV 60
             M   SF+GR LF S+FLLSAWQEFN+FG DGG +AKSL+PKF+ F  HV +HTG Q+P V
Sbjct:     1 MELASFLGRALFVSVFLLSAWQEFNDFGEDGGRSAKSLKPKFNAFVNHVTTHTGQQLPPV 60

Query:    61 EIKYLVXXXXXXXXXXXXXXXXXXXXXXYLLLLHQALATPILYDFYNYDADKKEFGQIFI 120
             ++K LV                      YLLLLHQA+ATPILYDFYNYD D+KEFGQ+F 
Sbjct:    61 DMKILVAAAIALKGIGGLLFVFGSSLGAYLLLLHQAVATPILYDFYNYDVDRKEFGQLFS 120

Query:   121 KFTQ 124
             KFTQ
Sbjct:   121 KFTQ 124

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006457 "protein folding" evidence=RCA

GO:0009408 "response to heat" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

TAIR|locus:2018364 AT1G04340 "AT1G04340" [Arabidopsis thaliana (taxid:3702)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 54/124 (43%), Positives = 74/124 (59%)

Query:     1 MAFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDV 60
             M F SF+GRVLFAS+F+LSAWQ FN+FG DGGPAAK L PK  +   H+ S  GV +P++
Sbjct:     1 MGFFSFLGRVLFASLFILSAWQMFNDFGTDGGPAAKELAPKLDLTKAHLSSILGVSLPNL 60

Query:    61 EIKYLVXXXXXXXXXXXXXXXXXXXXXXYLLLLHQALATPILYDFYNYDADKKEFGQIFI 120
             E+K +V                      YLL ++  + +PILYDFYNY  + ++F  +  
Sbjct:    61 EVKQVVWAIVALKGLGGLLFVIGNIFGAYLLAVYLVVVSPILYDFYNYGPEDRQFSLLLT 120

Query:   121 KFTQ 124
             +F Q
Sbjct:   121 EFLQ 124

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2176476 AT5G43460 "AT5G43460" [Arabidopsis thaliana (taxid:3702)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 54/135 (40%), Positives = 72/135 (53%)

Query:     1 MAFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDV 60
             M F SF+GRVLFAS+F+LSAWQ FN    DGGPAAK L PK  +   H+ S  GV +P +
Sbjct:     1 MGFFSFLGRVLFASLFILSAWQMFN----DGGPAAKELAPKLDLVKAHLSSRLGVTLPKI 56

Query:    61 EIKYLVXXXXXXXXXXXXXXXXXXXXXXYLLLLHQALATPILYDFYNYDADKKEFGQIFI 120
             E++ +V                      YLL  +  +  PILYDFYNY   ++ F  +  
Sbjct:    57 EVRQVVATIIALKGVGGLLFVIGNTFGAYLLASYLVVFGPILYDFYNYGPQERHFSLLLT 116

Query:   121 KFTQ-VSTYELSLSF 134
             +F Q V+ +   L F
Sbjct:   117 EFLQSVALFGALLFF 131

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

TAIR|locus:2086248 AT3G23190 "AT3G23190" [Arabidopsis thaliana (taxid:3702)]

 Score = 99 (39.9 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query:    90 LLLLHQALATPILYDFYNYDADKKEFGQIFIKFTQV--STYELSLSFSCNFYTMV 142
             LLL++QA+ +PILYDFYN D D+  F   + KF +    T       + + YT V
Sbjct:    90 LLLVYQAILSPILYDFYNRDYDRDHFTVFYTKFKEFVEETTSADGGVAMSLYTSV 144

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0006826 "iron ion transport" evidence=RCA

GO:0009736 "cytokinin mediated signaling pathway" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2086238 AT3G23180 "AT3G23180" [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 39/140 (27%), Positives = 64/140 (45%)

Query:     4 VSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDVEIK 63
             V  +GR LFAS F LS+W ++ E   +         PKF         ++G Q     IK
Sbjct:    21 VETIGRALFASSFFLSSWHDYMELKANWNGTEDYWSPKF--------GYSGDQ-----IK 67

Query:    64 YLVXXXXXXXXXXXXXXXXXXXXXXYLLLLHQALATPILYDFYNYDADKKEFGQIFIKFT 123
             +L+                      +LLL++Q +AT + +DFYN+  D +EFG +++K  
Sbjct:    68 HLMTVSIIVRTLGGLIFIYGSFFGAFLLLMYQGIATMVHHDFYNHRLDTEEFGLLYLKLK 127

Query:   124 QVSTYELSLSFSCNFYTMVF 143
             ++    +S + + N Y   F
Sbjct:   128 RILNETVSYNTAYNLYKSDF 147


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.330   0.144   0.439    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      155       133   0.00091  102 3  11 22  0.45    30
                                                     30  0.43    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  581 (62 KB)
  Total size of DFA:  137 KB (2085 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.15u 0.09s 12.24t   Elapsed:  00:00:02
  Total cpu time:  12.15u 0.09s 12.24t   Elapsed:  00:00:02
  Start:  Thu May  9 19:40:39 2013   End:  Thu May  9 19:40:41 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0006952 "defense response" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00020183001 SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (157 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	155
pfam05514	138	pfam05514, HR_lesion, HR-like lesion-inducing	4e-59

>gnl|CDD|191296 pfam05514, HR_lesion, HR-like lesion-inducing

 Score =  179 bits (456), Expect = 4e-59
 Identities = 93/124 (75%), Positives = 110/124 (88%)

Query: 1   MAFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDV 60
           M F+SF+GRVLFAS+FLLSAWQEF+EFG DGGPAAK L PKF++FSKHV  H G+QVP +
Sbjct: 1   MPFLSFLGRVLFASVFLLSAWQEFSEFGADGGPAAKELRPKFNMFSKHVSKHLGMQVPHI 60

Query: 61  EIKYLVAAAIALKGIGGLLFIFGSSFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFI 120
           ++K++VAA IALKG+GGLLFIFGSSFGAYLLL++QA ATPILYDFYNYD D+ EF Q+F 
Sbjct: 61  DVKHIVAALIALKGLGGLLFIFGSSFGAYLLLVYQAFATPILYDFYNYDVDRSEFVQLFN 120

Query: 121 KFTQ 124
           KFTQ
Sbjct: 121 KFTQ 124

Family of plant proteins that are associated with the hypersensitive response (HR) pathway of defence against plant pathogens. Length = 138

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	155
PF05514	138	HR_lesion: HR-like lesion-inducing ; InterPro: IPR	100.0
COG2259	142	Predicted membrane protein [Function unknown]	99.64
PF07681	85	DoxX: DoxX; InterPro: IPR011637 These proteins app	99.21
PF02077	267	SURF4: SURF4 family; InterPro: IPR002995 The surfe	98.93
PF02077	267	SURF4: SURF4 family; InterPro: IPR002995 The surfe	97.88
PF07291	184	MauE: Methylamine utilisation protein MauE; InterP	97.76
KOG3998	270	consensus Putative cargo transport protein ERV29 [	97.58
KOG3998	270	consensus Putative cargo transport protein ERV29 [	97.3
PF13564	103	DoxX_2: DoxX-like family	96.94
COG4270	131	Predicted membrane protein [Function unknown]	95.72
PF15111	251	TMEM101: TMEM101 protein family	90.77
PF13781	102	DoxX_3: DoxX-like family	90.08
PF04224	175	DUF417: Protein of unknown function, DUF417; Inter	86.93

>PF05514 HR_lesion: HR-like lesion-inducing ; InterPro: IPR008637 This is a family of plant proteins that are associated with the hypersensitive response (HR) pathway of defence against plant pathogens

Probab=100.00  E-value=6.9e-46  Score=285.13  Aligned_cols=137  Identities=66%  Similarity=1.072  Sum_probs=134.6

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhccccCccchhhccCchhhhhhhhhhhhcCCCCChhhHHHHHHHHHHHHHHHHHHH
Q 031695            1 MAFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDVEIKYLVAAAIALKGIGGLLF   80 (155)
Q Consensus         1 M~~l~~lGRvLfa~lFl~SG~~kl~~~~~~~g~~~~~l~P~~~~~~~~~~~~~Glp~P~~~~~~~~~~ai~~e~~Ggll~   80 (155)
                      ||+++++||+||+++|++|+|||+++++.++||++|+++||++.+++|+++++|+++|+++.+.++.++|++|++||+++
T Consensus         1 M~f~sf~GRvLFAs~FllSA~q~f~~fg~dGgpaak~l~Pkl~~~~~~i~s~lG~~vp~~~~k~lv~~~i~lkglGgiLF   80 (138)
T PF05514_consen    1 MGFSSFVGRVLFASVFLLSAWQKFNEFGDDGGPAAKALAPKLNVFKKHISSKLGVQVPHIDVKHLVAAAIALKGLGGILF   80 (138)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHchhHHHHHHHHHhhcCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhHHHHHHHHHHHHHHHhhhcccCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 031695           81 IFGSSFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFIKFTQVSTYELSLSFSCN  137 (155)
Q Consensus        81 i~G~~~gA~lLa~F~~~~T~i~HdFWn~~~~~~~~~~~~~~F~KNlal~GgLL~~~~  137 (155)
                      ++|+++||++|++|++++||++|||||+|.|++|+.+++++|+||+|++||||+++.
T Consensus        81 i~gss~GA~LLll~l~~~Tpi~~dFyn~~~~~~e~~~~l~~F~qnlAL~GALLfFlg  137 (138)
T PF05514_consen   81 IFGSSFGAYLLLLYLAIVTPILYDFYNYDSESAEFVQLLIMFLQNLALFGALLFFLG  137 (138)
T ss_pred             HhcchhHHHHHHHHHHHHHHHhhhhhccCCChhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999999999998763

>COG2259 Predicted membrane protein [Function unknown]

Probab=99.64  E-value=2.6e-15  Score=115.27  Aligned_cols=111  Identities=20%  Similarity=0.218  Sum_probs=92.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhh-ccccCccchhhccCchhhhhhhhhhhhcCCCCChhhHHHHHHHHHHHHHHHHHHH
Q 031695            2 AFVSFVGRVLFASIFLLSAWQEFN-EFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDVEIKYLVAAAIALKGIGGLLF   80 (155)
Q Consensus         2 ~~l~~lGRvLfa~lFl~SG~~kl~-~~~~~~g~~~~~l~P~~~~~~~~~~~~~Glp~P~~~~~~~~~~ai~~e~~Ggll~   80 (155)
                      +...++.|++++.+|+.+|++|+. +++++.++..                +.|.|.|..    .+..++..|++||+++
T Consensus        13 ~~~lli~Rl~l~~~fi~~G~~K~~~~~~g~~~~~~----------------~~g~p~~~~----~a~~~~~~El~~glll   72 (142)
T COG2259          13 DLGLLILRLLLALIFIVSGLGKLFGGLAGTIQYFE----------------SLGLPPPTL----LAILAAILELVGGLLL   72 (142)
T ss_pred             hHHHHHHHHHHHHHHHHHhHHHHccCcHHHHHHHH----------------HcCCChHHH----HHHHHHHHHHHHHHHH
Confidence            356789999999999999999999 7777655442                578888863    5677889999999999


Q ss_pred             HHhh--HHHHHHHHHHHHHHHhhhcccCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 031695           81 IFGS--SFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFIKFTQVSTYELSLSFSCNF  138 (155)
Q Consensus        81 i~G~--~~gA~lLa~F~~~~T~i~HdFWn~~~~~~~~~~~~~~F~KNlal~GgLL~~~~~  138 (155)
                      ++|.  |++|..+++|+++++...|.+|+...  .+   + +.|.||++++|+++.....
T Consensus        73 llGl~tr~aA~~l~~~~l~a~~~~h~~~~~~~--~~---~-~~~~~~l~~~~~~l~l~~~  126 (142)
T COG2259          73 LLGLFTRLAALVLAVFMLVAIFAVHAFWGFFG--LA---N-NGFEKNLLLIGGLLLLAIT  126 (142)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcchhhcc--cc---c-hhHHHHHHHHHHHHHHHhc
Confidence            9996  99999999999999999999998421  11   1 6899999999999887653

>PF07681 DoxX: DoxX; InterPro: IPR011637 These proteins appear to have some sequence similarity with IPR007301 from INTERPRO but their function is unknown []

Probab=99.21  E-value=9.9e-11  Score=81.38  Aligned_cols=80  Identities=23%  Similarity=0.257  Sum_probs=65.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhc--cccCccchhhccCchhhhhhhhhhhhcCCCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 031695            5 SFVGRVLFASIFLLSAWQEFNE--FGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDVEIKYLVAAAIALKGIGGLLFIF   82 (155)
Q Consensus         5 ~~lGRvLfa~lFl~SG~~kl~~--~~~~~g~~~~~l~P~~~~~~~~~~~~~Glp~P~~~~~~~~~~ai~~e~~Ggll~i~   82 (155)
                      .++.|++++..|+.+|++|+.+  ++++.               +.++ ..|.|.|+    .....+...|+++|+++++
T Consensus         2 ll~~Ri~lg~~f~~~G~~K~~~~~~~~~~---------------~~~~-~~~~~~~~----~~~~~~~~~E~~~gl~l~~   61 (85)
T PF07681_consen    2 LLILRILLGLVFLFHGLQKLFGFGPEGFA---------------GFFA-PFGLPPPG----LFAYLAGIAELVGGLLLLL   61 (85)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCcHHHH---------------HHHH-HcCCCchH----HHHHHHHHHHHHHHHHHHH
Confidence            4679999999999999999995  44322               2222 45766665    4578888999999999999


Q ss_pred             hh--HHHHHHHHHHHHHHHhhhcc
Q 031695           83 GS--SFGAYLLLLHQALATPILYD  104 (155)
Q Consensus        83 G~--~~gA~lLa~F~~~~T~i~Hd  104 (155)
                      |.  |++|..++.+++.+++.+|+
T Consensus        62 G~~tr~aa~~~~~~~~~~~~~~H~   85 (85)
T PF07681_consen   62 GLFTRLAALVLALFMLVATFFVHW   85 (85)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhcC
Confidence            95  89999999999999999996

They are predicted inner membrane proteins.

>PF02077 SURF4: SURF4 family; InterPro: IPR002995 The surfeit locus gene SURF4 (or surf-4) encodes a conserved integral eukaryotic membrane protein of about 270 to 300 amino-acid residues that seems to be located in the endoplasmic reticulum []

Probab=98.93  E-value=1.3e-08  Score=86.28  Aligned_cols=67  Identities=19%  Similarity=0.215  Sum_probs=53.4

Q ss_pred             HHHHHHHHHHHhh--HHHHHHHHHHHHHHHhhhcccCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 031695           72 LKGIGGLLFIFGS--SFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFIKFTQVSTYELSLSFSCNF  138 (155)
Q Consensus        72 ~e~~Ggll~i~G~--~~gA~lLa~F~~~~T~i~HdFWn~~~~~~~~~~~~~~F~KNlal~GgLL~~~~~  138 (155)
                      +..+..++++.|+  ++.|.+|.+.+.......|+||+++.+.+.+.-.--+|+||++++||+|+..|.
T Consensus       185 ~g~~l~i~v~vGyktk~~A~~Lv~~L~~~n~~~n~fW~~~~~~~~~dflkydFfq~lSviGGLLllv~~  253 (267)
T PF02077_consen  185 VGLALCILVVVGYKTKLSALLLVLWLSIYNVFVNNFWFYPSDSPMRDFLKYDFFQTLSVIGGLLLLVNL  253 (267)
T ss_pred             HHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            3444457888997  799999999999999999999998654443322235999999999999998774

; GO: 0016021 integral to membrane

>PF02077 SURF4: SURF4 family; InterPro: IPR002995 The surfeit locus gene SURF4 (or surf-4) encodes a conserved integral eukaryotic membrane protein of about 270 to 300 amino-acid residues that seems to be located in the endoplasmic reticulum []

Probab=97.88  E-value=6.1e-05  Score=64.07  Aligned_cols=108  Identities=12%  Similarity=0.066  Sum_probs=83.6

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhccccCccchhhccCchhhhhhhhhhhhcCCCCChhhHHHHHHHHHHHHHHHHHHHH
Q 031695            2 AFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDVEIKYLVAAAIALKGIGGLLFI   81 (155)
Q Consensus         2 ~~l~~lGRvLfa~lFl~SG~~kl~~~~~~~g~~~~~l~P~~~~~~~~~~~~~Glp~P~~~~~~~~~~ai~~e~~Ggll~i   81 (155)
                      |++..+||.++.+-|+=-|++...+|..-..|.               +...+  .|.......+..-+..|++|+++++
T Consensus        20 ~~LP~iaR~~iVsTFlED~lRi~~QW~~Q~~yl---------------~~~w~--~~~~la~lfl~~n~i~ql~gs~LVl   82 (267)
T PF02077_consen   20 PYLPTIARFLIVSTFLEDGLRIWFQWSDQVDYL---------------QNSWH--CGWFLAVLFLLLNIIGQLVGSILVL   82 (267)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHH---------------HHhcC--CChHHHHHHHHHHHHHHhhhhheEe
Confidence            678899999999999999999999999533333               33344  4444455667888889999999988


Q ss_pred             Hhh--HHHHHHHHHHHHHHHhhhcccCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 031695           82 FGS--SFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFIKFTQVSTYELSLSFSCN  137 (155)
Q Consensus        82 ~G~--~~gA~lLa~F~~~~T~i~HdFWn~~~~~~~~~~~~~~F~KNlal~GgLL~~~~  137 (155)
                      +-.  ..+..+|..-.+.=+...+-+|+           ..-+++|++++||++++++
T Consensus        83 ~rk~~~~a~~~L~~vvvlQ~i~Y~l~~d-----------~~fllRnlsviGgLLLl~a  129 (267)
T PF02077_consen   83 LRKKVEYACGLLFGVVVLQTIAYGLLWD-----------LKFLLRNLSVIGGLLLLLA  129 (267)
T ss_pred             eehhHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHhHHHHHHHHHHH
Confidence            764  46777777777777777766775           5679999999999999886

; GO: 0016021 integral to membrane

>PF07291 MauE: Methylamine utilisation protein MauE; InterPro: IPR009908 This entry consists of several bacterial methylamine utilisation MauE proteins

Probab=97.76  E-value=0.00047  Score=55.39  Aligned_cols=115  Identities=20%  Similarity=0.162  Sum_probs=74.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhccccCccchhhccCchhhhhhhhhhhhcCCCCChhhHHHHHHHHHHHHHHHHHHHH
Q 031695            2 AFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDVEIKYLVAAAIALKGIGGLLFI   81 (155)
Q Consensus         2 ~~l~~lGRvLfa~lFl~SG~~kl~~~~~~~g~~~~~l~P~~~~~~~~~~~~~Glp~P~~~~~~~~~~ai~~e~~Ggll~i   81 (155)
                      |.+..+.|++++.+|+.+|+.|+.|++...               +++++ ..+ +|+...+.+...-..+|++.|++++
T Consensus         7 P~v~~~~r~~l~llf~~aai~Kl~d~~~F~---------------~~i~~-y~l-lP~~~~~~~A~~lP~~El~~gl~Ll   69 (184)
T PF07291_consen    7 PVVSLLLRLFLALLFLYAAISKLRDPEAFA---------------ASIAA-YRL-LPDWLVRPVAWALPWLELALGLLLL   69 (184)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHcCHHHHH---------------HHHHH-ccc-ChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            677889999999999999999999988432               22221 111 3443344556667789999999999


Q ss_pred             Hhh--H----HHHHHHHHHHHHHHhhhcccC-CCC-----hhhhHHHHHHHHHHHHHHHHHHHHH
Q 031695           82 FGS--S----FGAYLLLLHQALATPILYDFY-NYD-----ADKKEFGQIFIKFTQVSTYELSLSF  134 (155)
Q Consensus        82 ~G~--~----~gA~lLa~F~~~~T~i~HdFW-n~~-----~~~~~~~~~~~~F~KNlal~GgLL~  134 (155)
                      ++.  +    ..+.++.+|++..+.....-- +.|     ...++. ..-.+..+|+.+.+..+.
T Consensus        70 ~~~~~~~a~~~a~~Ll~~F~~ai~~~~~rg~~~idCGCfG~~~~~~-l~~~~v~Rn~~L~~~al~  133 (184)
T PF07291_consen   70 FPPTRRWAALLAAALLLVFTAAIAINLLRGRTDIDCGCFGGGSSEP-LGWFLVVRNLLLAALALA  133 (184)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCc-cCHHHHHHHHHHHHHHHH
Confidence            885  2    356677788776665433221 100     011111 224678999999866543

Synthesis of enzymes involved in methylamine oxidation via methylamine dehydrogenase (MADH) is encoded by genes present in the mau cluster. MauE and MauD are specifically involved in the processing, transport, and/or maturation of the beta-subunit and that the absence of each of these proteins leads to production of a non-functional beta-subunit which becomes rapidly degraded [].; GO: 0030416 methylamine metabolic process, 0016021 integral to membrane

>KOG3998 consensus Putative cargo transport protein ERV29 [Intracellular trafficking, secretion, and vesicular transport]

Probab=97.58  E-value=0.00016  Score=61.32  Aligned_cols=67  Identities=18%  Similarity=0.069  Sum_probs=51.2

Q ss_pred             HHHHHHH---HHHHHhh--HHHHHHHHHHHHHHHhhhcccCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 031695           71 ALKGIGG---LLFIFGS--SFGAYLLLLHQALATPILYDFYNYDADKKEFGQIFIKFTQVSTYELSLSFSCN  137 (155)
Q Consensus        71 ~~e~~Gg---ll~i~G~--~~gA~lLa~F~~~~T~i~HdFWn~~~~~~~~~~~~~~F~KNlal~GgLL~~~~  137 (155)
                      +.-++|-   +++.+|.  +..|.+|.+-+........+||+.+.+.+-+--.-.+|+++++.+||+|++.|
T Consensus       184 l~~Iv~~~l~i~v~lGfktKl~a~llvl~L~~~ni~~N~~w~ip~~~~~~df~rydFfqtlSvIGGlLllv~  255 (270)
T KOG3998|consen  184 LLSIVSFGLMIFVWLGFKTKLFAILLVLWLFGYNILLNAWWTIPSDNPLRDFSRYDFFQTLSVIGGLLLLVN  255 (270)
T ss_pred             HHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHhhchhhhccCCchHHHHHHHHHHHHHHHhccEEEEEE
Confidence            3345555   3455786  79999999999999999999999766555432235789999999999987644

>KOG3998 consensus Putative cargo transport protein ERV29 [Intracellular trafficking, secretion, and vesicular transport]

Probab=97.30  E-value=0.00075  Score=57.29  Aligned_cols=109  Identities=12%  Similarity=0.091  Sum_probs=79.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhccccCccchhhccCchhhhhhhhhhhhcCCCCChhhHHHHHHHHHHHHHHHHHHHH
Q 031695            2 AFVSFVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDVEIKYLVAAAIALKGIGGLLFI   81 (155)
Q Consensus         2 ~~l~~lGRvLfa~lFl~SG~~kl~~~~~~~g~~~~~l~P~~~~~~~~~~~~~Glp~P~~~~~~~~~~ai~~e~~Ggll~i   81 (155)
                      |++..++|.++.+-|.--|+.-..+++.-..+.               +...|  .+..-..+........|++|+.+++
T Consensus        23 ~ylptlaRl~ivSTf~eD~lri~~qw~~q~~~~---------------~~~~~--~~~~~a~~~~~v~~l~~l~g~~liv   85 (270)
T KOG3998|consen   23 PYLPTLARLLIVSTFFEDGLRIVFQWPLQVSYL---------------NINWG--CGYFFAGVFTIVMVLGQLVGSVLIV   85 (270)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhccHHHHHHH---------------HHhcC--CCcHHHHHHHHHHHHHHHhcceEee
Confidence            678899999999999999999999998533333               33334  4544455666777778888888888


Q ss_pred             HhhH--HHHHHHHHHHHHHHhhhcccCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 031695           82 FGSS--FGAYLLLLHQALATPILYDFYNYDADKKEFGQIFIKFTQVSTYELSLSFSCNF  138 (155)
Q Consensus        82 ~G~~--~gA~lLa~F~~~~T~i~HdFWn~~~~~~~~~~~~~~F~KNlal~GgLL~~~~~  138 (155)
                      ...+  .|..+|..=.+.=|...+-+|+           ..-+++|.+++||++++++=
T Consensus        86 ~rkkv~~a~glL~~~~~lq~i~y~i~t~-----------~~~~~rN~sviggllLllae  133 (270)
T KOG3998|consen   86 LRKKVAYATGLLLFIVVLQTIAYSILTD-----------LVFLLRNISVIGGLLLLLAE  133 (270)
T ss_pred             eehhhHHHhHHHHHHHHHHHHHHHHHHH-----------HHHHHHHhHHHHHHHHHHHH
Confidence            7764  3555555545555555666664           56799999999999998763

>PF13564 DoxX_2: DoxX-like family

Probab=96.94  E-value=0.01  Score=42.54  Aligned_cols=73  Identities=19%  Similarity=0.149  Sum_probs=49.1

Q ss_pred             HHHHHHHHHHHHHHHHhhccccCccchhhccCchhhhhhhhhhhhcCCCCChhhHHHHHHHHHHHHHHHHHHHHHh----
Q 031695            8 GRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDVEIKYLVAAAIALKGIGGLLFIFG----   83 (155)
Q Consensus         8 GRvLfa~lFl~SG~~kl~~~~~~~g~~~~~l~P~~~~~~~~~~~~~Glp~P~~~~~~~~~~ai~~e~~Ggll~i~G----   83 (155)
                      -+++++..|+.+|+.|+.+.+.    .           .+..+ +.|  .|+    ........+|++|+++++.+    
T Consensus         2 l~~lla~~f~~~g~~kl~~~~~----~-----------~~~~~-~~g--~p~----~~~~~~G~~Ei~gai~Ll~~~~~~   59 (103)
T PF13564_consen    2 LTILLALFFLFSGVMKLFGPPE----M-----------VEMFP-KLG--YPK----WFVYVVGVLEILGAIGLLIPLFWN   59 (103)
T ss_pred             HHHHHHHHHHHHHHHHhCCCHH----H-----------HHHhH-hcC--CCH----HHHHHHHHHHHHHHHHHHHccccc
Confidence            3688999999999999987652    1           11212 345  454    24566778999999999988    


Q ss_pred             -h--HHHHHHHHHHHHHHHhhhc
Q 031695           84 -S--SFGAYLLLLHQALATPILY  103 (155)
Q Consensus        84 -~--~~gA~lLa~F~~~~T~i~H  103 (155)
                       +  .+++..+....+.+.. .|
T Consensus        60 ~~~~~~aa~~l~~~m~~A~~-~h   81 (103)
T PF13564_consen   60 PRLSPLAALGLLVLMLGAIY-TH   81 (103)
T ss_pred             cHHHHHHHHHHHHHHHHHHH-HH
Confidence             2  3566666555555444 55

>COG4270 Predicted membrane protein [Function unknown]

Probab=95.72  E-value=0.043  Score=41.94  Aligned_cols=73  Identities=21%  Similarity=0.266  Sum_probs=50.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhccccCccchhhccCchhhhhhhhhhhhcCCCCChhhHHHHHHHHHHHHHHHHHHHHHhh--
Q 031695            7 VGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDVEIKYLVAAAIALKGIGGLLFIFGS--   84 (155)
Q Consensus         7 lGRvLfa~lFl~SG~~kl~~~~~~~g~~~~~l~P~~~~~~~~~~~~~Glp~P~~~~~~~~~~ai~~e~~Ggll~i~G~--   84 (155)
                      +-|.+++.-|+.-|+.|+...+.-.    ..+.|             -+|.|.    ..+..+...|++||+.++..+  
T Consensus         8 L~~~~la~~f~~iGi~HF~r~eqf~----~IVPp-------------~vP~p~----tav~VSG~fEilgglaLlip~~s   66 (131)
T COG4270           8 LLLAFLAAAFLLIGIGHFTRPEQFR----RIVPP-------------CVPLPK----TAVLVSGIFEILGGLALLIPAPS   66 (131)
T ss_pred             HHHHHHHHHHHHHhhhhccchhhhc----ccCCC-------------CCCcch----hHHHHHHHHHHHhhhhhhcCCcH
Confidence            3456789999999999998877422    22222             255663    345667789999999988774  


Q ss_pred             HHHHHHHHHHHHHHHh
Q 031695           85 SFGAYLLLLHQALATP  100 (155)
Q Consensus        85 ~~gA~lLa~F~~~~T~  100 (155)
                      +..+.-|..+++.++|
T Consensus        67 ~~aa~gl~~l~laVfP   82 (131)
T COG4270          67 QAAAWGLIILLLAVFP   82 (131)
T ss_pred             HHHHhhHHHHHHHHcc
Confidence            4566666666666655

>PF15111 TMEM101: TMEM101 protein family

Probab=90.77  E-value=1.3  Score=37.59  Aligned_cols=107  Identities=13%  Similarity=0.124  Sum_probs=71.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccccCccchhhccCchhhhhhhhhhhhcCCCCChhhHHHHHHHHHHHHHHHHHHHHHhh-
Q 031695            6 FVGRVLFASIFLLSAWQEFNEFGVDGGPAAKSLEPKFHIFSKHVLSHTGVQVPDVEIKYLVAAAIALKGIGGLLFIFGS-   84 (155)
Q Consensus         6 ~lGRvLfa~lFl~SG~~kl~~~~~~~g~~~~~l~P~~~~~~~~~~~~~Glp~P~~~~~~~~~~ai~~e~~Ggll~i~G~-   84 (155)
                      -.||+.++...+.++++-...-|+.-++.            +      .+|=-++    .+..-.+.-+++|+++..|. 
T Consensus       137 ~tgq~~lgiyli~~Ay~L~~S~Edr~A~l------------~------hipgge~----~l~~~~v~y~~~gl~flsgy~  194 (251)
T PF15111_consen  137 STGQVFLGIYLICVAYSLQHSKEDRLAYL------------N------HIPGGEV----MLQLLVVLYVVLGLAFLSGYY  194 (251)
T ss_pred             hhhHHHHHHHHHHHHHHHHcCHHHHHHHH------------h------hCCCCch----hHHHHHHHHHHHHHHHHcccc
Confidence            46899999999999888766555322222            1      2232332    12333345688999999996 


Q ss_pred             -HHHHHHHHHHHHHHHhhhc---ccCCCChhhhHHHHHHHHHHHHHHHHHHHHHH
Q 031695           85 -SFGAYLLLLHQALATPILY---DFYNYDADKKEFGQIFIKFTQVSTYELSLSFS  135 (155)
Q Consensus        85 -~~gA~lLa~F~~~~T~i~H---dFWn~~~~~~~~~~~~~~F~KNlal~GgLL~~  135 (155)
                       +..+-.|++-+.+++...-   .||.... .-|+-.|++.--+|+.+.|+++..
T Consensus       195 ~~~~~~~lav~l~~~~l~iDgnv~yW~~s~-~vEfW~Qm~li~~nv~I~ga~~il  248 (251)
T PF15111_consen  195 VKLAAQILAVLLPFVILLIDGNVKYWHKSR-RVEFWNQMKLIGRNVGIFGALLIL  248 (251)
T ss_pred             HHHHHHHHHHHHHHhheEEecchhhhhcch-hhhHHHHHHHHHhcchHhhheeee
Confidence             5666667766666666543   3886543 567777799999999999998753

>PF13781 DoxX_3: DoxX-like family

Probab=90.08  E-value=2.2  Score=31.10  Aligned_cols=71  Identities=18%  Similarity=0.079  Sum_probs=52.3

Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHHHHHHHHHHhh--H----HHHHHHHHHHHHHHhhhcccCCCChhhhHHHHHHHHHH
Q 031695           50 LSHTGVQVPDVEIKYLVAAAIALKGIGGLLFIFGS--S----FGAYLLLLHQALATPILYDFYNYDADKKEFGQIFIKFT  123 (155)
Q Consensus        50 ~~~~Glp~P~~~~~~~~~~ai~~e~~Ggll~i~G~--~----~gA~lLa~F~~~~T~i~HdFWn~~~~~~~~~~~~~~F~  123 (155)
                      -++.|.+-+.  .+..+.++.+.|++=|+++...+  |    .-..++..+++.+|..-=++|..    |     ++-..
T Consensus        24 L~~~G~~~~~--a~~~~~~~g~~di~lGl~~l~~~~~r~~~~l~i~~~l~y~~~~~~~~P~lw~~----P-----f~Pl~   92 (102)
T PF13781_consen   24 LAAVGLPGAL--APLLLYAGGLLDIALGLLLLSRRRRRWLLLLQIALLLGYTLAIAILLPELWLH----P-----FNPLV   92 (102)
T ss_pred             HHHhCCChhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHh----h-----hhhHH
Confidence            3345655443  45677888889999999888764  2    35567788899999888888862    2     68899


Q ss_pred             HHHHHHHH
Q 031695          124 QVSTYELS  131 (155)
Q Consensus       124 KNlal~Gg  131 (155)
                      ||+.++.-
T Consensus        93 knlp~l~l  100 (102)
T PF13781_consen   93 KNLPMLAL  100 (102)
T ss_pred             HHHHHHHH
Confidence            99998763

>PF04224 DUF417: Protein of unknown function, DUF417; InterPro: IPR007339 This family of uncharacterised proteins appears to be restricted to proteobacteria

Probab=86.93  E-value=15  Score=29.77  Aligned_cols=126  Identities=14%  Similarity=0.087  Sum_probs=67.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccccCcc-chhhccCchhhhhhhhh-----hhhcCCCCChh-------hHHHHHHHHHH
Q 031695            5 SFVGRVLFASIFLLSAWQEFNEFGVDGG-PAAKSLEPKFHIFSKHV-----LSHTGVQVPDV-------EIKYLVAAAIA   71 (155)
Q Consensus         5 ~~lGRvLfa~lFl~SG~~kl~~~~~~~g-~~~~~l~P~~~~~~~~~-----~~~~Glp~P~~-------~~~~~~~~ai~   71 (155)
                      ..+.|+-...+|++-|..|+.++|+++= |..+. -|-++-+-++.     ....|- .|+=       .....-..-..
T Consensus        15 ~~i~r~~i~iVl~WiG~lKf~~yEA~gI~PlVan-SPlmswlY~~~~~~~~~~~~~~-~~~n~~wh~~n~~~~~S~~lG~   92 (175)
T PF04224_consen   15 YNILRLGIVIVLLWIGGLKFTPYEADGIVPLVAN-SPLMSWLYDVFSYKYHQNKEGE-VPENRAWHKANGTYGFSYLLGV   92 (175)
T ss_pred             hHHHHHHHHHHHHHHHHhhhhHHHHhhhhHHHhC-CcHHHHHhhccchhhhhccccc-cHHHHHHHHhcCchhhHHHHHH
Confidence            3578999999999999999999996552 22100 12221111111     001111 1100       01122344456


Q ss_pred             HHHHHHHHHHHhh---H--HHHHHHHHHHHHHHhhhc----ccCCCCh------hhhHHHHHHHHHHHHHHHHHHHHHHH
Q 031695           72 LKGIGGLLFIFGS---S--FGAYLLLLHQALATPILY----DFYNYDA------DKKEFGQIFIKFTQVSTYELSLSFSC  136 (155)
Q Consensus        72 ~e~~Ggll~i~G~---~--~gA~lLa~F~~~~T~i~H----dFWn~~~------~~~~~~~~~~~F~KNlal~GgLL~~~  136 (155)
                      +|++-|+++++|.   +  .-..+++..+-++|..|=    +-|..+.      ....     +--+|.+.+.|+-+..+
T Consensus        93 vEi~~~ill~~g~~~p~~g~~G~ll~~~~flvTLSFL~TTP~vw~~~~GGFP~Lsg~g-----~fllKDivlLa~~l~~~  167 (175)
T PF04224_consen   93 VEIIIGILLLLGIWSPKLGILGGLLAFGTFLVTLSFLFTTPGVWVPSLGGFPYLSGAG-----RFLLKDIVLLAASLVLL  167 (175)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeccCCCCceecCCC-----chHHHHHHHHHHHHHHH
Confidence            7999999999984   2  223344555555555543    2343211      0111     22589999999988765


Q ss_pred             H
Q 031695          137 N  137 (155)
Q Consensus       137 ~  137 (155)
                      .
T Consensus       168 ~  168 (175)
T PF04224_consen  168 S  168 (175)
T ss_pred             H
Confidence            4

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00