Citrus Sinensis ID: 031770

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150---
Protein Sequence
MAKPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLADQRERSMALNSEGLEGLVPRAKLLLTLGGTFFLGFWPLILVTVGFFSALYFYFGPTFVHDASNSPMSPAQYGDPYALLEDERISQIAPHVN
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHccccccccccccc
Coil and Loop (DISEMBL)
MAKPPESLFMKELKrrgmtptslledssrtdsglddktklkeedigfsrrntvsTEIDKSLADQRERSMALNSEGLEGLVPRAKLLLTlggtfflgfWPLILVTVGFFSAlyfyfgptfvhdasnspmspaqygdpyallederisqiaphvn
Flexible Loop (DISEMBL)
MAKPPESLFMKelkrrgmtptslledssrtdsglddktklkeedigfsrrntvsteidksladqRERSMALNSEGLEGLVPRAKLLLTLGGTFFLGFWPLILVTVGFFSALYFYFGPTFVHDASNSPMSPAQYGDPYALLEDERISQIAPHVN
Low Complexity Region (SEG)
MAKPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLADQRERSMALNSEGLEGLVPRAKllltlggtfflgfWPLILVTVGFFSALYFYFGPTFVHDASNSPMSPAQYGDPYALLEDERISQIAPHVN
Disordered region (IsUnstruct)
************************************************************************************LLLTLGGTFFLGFWPLILVTVGFFSALYFYFGPTFVHD*******************************
Disordered Region (DISOPRED)
****PES***K*************************************************************SEGLEGLVPRAKLLLTLGGTFFLGFWPLILVTVGFFSALYFYFGPTFVHDASNSPMSPAQYGDPYALLEDERIS*******
Disordered Region (DISEMBL)
MAKPPESLFMKELKRRG******************DKTKLKEEDIGFSRRNTVSTEIDKSLADQRERSMALNSEGLEGLVPRAKLLLTLGGTFFLGFWPLILVTVGFFSALYFYFGPTFVHDASNSPMSPAQYGDPYALLEDERISQIAPHVN
Disordered Region (DISPRO)
*****************************************************************ER***LNSEGLEGLVPRAKLLLTLGGTFFLGFWPLILVTVGFFSALYFYFGPTFVHDASNSPMSPAQYGDPYALLEDERISQI*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAKPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLADQRERSMALNSEGLEGLVPRAKLLLTLGGTFFLGFWPLILVTVGFFSALYFYFGPTFVHDASNSPMSPAQYGDPYALLEDERISQIAPHVN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
224105771	226	predicted protein [Populus trichocarpa]	0.980	0.663	0.76	1e-62
225429185	216	PREDICTED: uncharacterized protein LOC10	0.980	0.694	0.768	2e-61
255562188	216	conserved hypothetical protein [Ricinus	0.967	0.685	0.785	3e-61
356536075	217	PREDICTED: uncharacterized protein LOC10	0.986	0.695	0.748	6e-60
351727323	217	uncharacterized protein LOC100305745 [Gl	0.986	0.695	0.741	7e-60
388522639	214	unknown [Medicago truncatula]	0.986	0.705	0.741	2e-59
224060907	152	predicted protein [Populus trichocarpa]	0.980	0.986	0.733	5e-59
388519125	215	unknown [Lotus japonicus]	0.973	0.693	0.731	2e-56
312282351	212	unnamed protein product [Thellungiella h	0.954	0.688	0.664	1e-47
297852692	212	hypothetical protein ARALYDRAFT_474138 [	0.960	0.693	0.635	2e-47

>gi|224105771|ref|XP_002313927.1| predicted protein [Populus trichocarpa] gi|222850335|gb|EEE87882.1| predicted protein [Populus trichocarpa]

 Score =  244 bits (622), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 114/150 (76%), Positives = 135/150 (90%)

Query: 3   KPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLA 62
           +P ESLFMKELKRRGMTPTSLLE+++R + G++D+ K+ EED GFS+RN VSTE+DKSL+
Sbjct: 76  EPTESLFMKELKRRGMTPTSLLEETNRGNYGVEDEMKIGEEDRGFSKRNPVSTELDKSLS 135

Query: 63  DQRERSMALNSEGLEGLVPRAKLLLTLGGTFFLGFWPLILVTVGFFSALYFYFGPTFVHD 122
           +QRE+SMALNSEG+EGL+PRAKLLLTLGGTFFLGFWPLIL+TV FFS+LYFYFGP+FVHD
Sbjct: 136 NQREKSMALNSEGIEGLIPRAKLLLTLGGTFFLGFWPLILITVAFFSSLYFYFGPSFVHD 195

Query: 123 ASNSPMSPAQYGDPYALLEDERISQIAPHV 152
            SN+  SP QY DPY LLEDERISQIAP +
Sbjct: 196 GSNASFSPPQYIDPYELLEDERISQIAPSL 225

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429185|ref|XP_002275810.1| PREDICTED: uncharacterized protein LOC100266884 [Vitis vinifera] gi|297736400|emb|CBI25123.3| unnamed protein product [Vitis vinifera]

 Score =  239 bits (610), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 116/151 (76%), Positives = 131/151 (86%), Gaps = 1/151 (0%)

Query: 3   KPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLA 62
           +PPESLFMKELKRRGMTPTSLLEDS R   GL+++ KL EEDIGFS+RN  ST+ + +L+
Sbjct: 67  EPPESLFMKELKRRGMTPTSLLEDSKRGAYGLEEEIKL-EEDIGFSKRNAYSTDFEANLS 125

Query: 63  DQRERSMALNSEGLEGLVPRAKLLLTLGGTFFLGFWPLILVTVGFFSALYFYFGPTFVHD 122
           +QRERSMALNSEGLEGL+PRAKLLLT+GGTFFLGF PLIL+TV FF ALYFYFGPTFVHD
Sbjct: 126 NQRERSMALNSEGLEGLIPRAKLLLTIGGTFFLGFGPLILITVAFFCALYFYFGPTFVHD 185

Query: 123 ASNSPMSPAQYGDPYALLEDERISQIAPHVN 153
            S +P+ P QY DPY LLEDERISQIAP VN
Sbjct: 186 GSKTPIMPPQYIDPYELLEDERISQIAPRVN 216

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255562188|ref|XP_002522102.1| conserved hypothetical protein [Ricinus communis] gi|223538701|gb|EEF40302.1| conserved hypothetical protein [Ricinus communis]

 Score =  239 bits (609), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 117/149 (78%), Positives = 130/149 (87%), Gaps = 1/149 (0%)

Query: 5   PESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKL-KEEDIGFSRRNTVSTEIDKSLAD 63
           PESLFMKELKRRGMTPTSLLEDS++   GL+D+ K+ +EED GF +R  VSTE DKSL +
Sbjct: 67  PESLFMKELKRRGMTPTSLLEDSNKGSYGLEDEFKIGQEEDRGFFKRKVVSTEFDKSLTN 126

Query: 64  QRERSMALNSEGLEGLVPRAKLLLTLGGTFFLGFWPLILVTVGFFSALYFYFGPTFVHDA 123
           QRE SMALNSEGLEGL+PRAKLLLT+GGTFFLGFWPLILVTVGFFSALYFYFG TF+HD 
Sbjct: 127 QRETSMALNSEGLEGLIPRAKLLLTIGGTFFLGFWPLILVTVGFFSALYFYFGSTFIHDG 186

Query: 124 SNSPMSPAQYGDPYALLEDERISQIAPHV 152
           SN+PMSP  Y DPY LLEDERISQIAP +
Sbjct: 187 SNTPMSPPPYIDPYELLEDERISQIAPSL 215

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356536075|ref|XP_003536566.1| PREDICTED: uncharacterized protein LOC100797764 [Glycine max]

 Score =  235 bits (599), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 113/151 (74%), Positives = 129/151 (85%)

Query: 3   KPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLA 62
           +PPESLFMKELKRRGMTPTSLL+D  ++D GLD++  + EED GF +R  VST +++SL 
Sbjct: 67  EPPESLFMKELKRRGMTPTSLLDDYKQSDYGLDEEVYVNEEDRGFPKRKAVSTNVERSLD 126

Query: 63  DQRERSMALNSEGLEGLVPRAKLLLTLGGTFFLGFWPLILVTVGFFSALYFYFGPTFVHD 122
           +QRERSMALNSEGLEGLVPRAKLLLT+GGTFFLGF PLIL+ V  FSALYFYFGPTFVHD
Sbjct: 127 NQRERSMALNSEGLEGLVPRAKLLLTIGGTFFLGFGPLILIIVATFSALYFYFGPTFVHD 186

Query: 123 ASNSPMSPAQYGDPYALLEDERISQIAPHVN 153
           AS   +SP QY DPYALLEDERISQIAP +N
Sbjct: 187 ASKMAISPPQYVDPYALLEDERISQIAPRLN 217

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727323|ref|NP_001236133.1| uncharacterized protein LOC100305745 [Glycine max] gi|255626505|gb|ACU13597.1| unknown [Glycine max]

 Score =  234 bits (598), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 112/151 (74%), Positives = 129/151 (85%)

Query: 3   KPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLA 62
           +PPESLFMKELKRRGMTPTSLL+D  ++D GLD++  + EED GF +R  VST +++SL 
Sbjct: 67  EPPESLFMKELKRRGMTPTSLLDDYKQSDYGLDEEVYVNEEDRGFPKRKAVSTNVERSLD 126

Query: 63  DQRERSMALNSEGLEGLVPRAKLLLTLGGTFFLGFWPLILVTVGFFSALYFYFGPTFVHD 122
           +QRERSMALNSEGLEGL+PRAKLLLT+GGTFFLGF PLIL+ V  FSALYFYFGPTFVHD
Sbjct: 127 NQRERSMALNSEGLEGLIPRAKLLLTIGGTFFLGFGPLILIIVATFSALYFYFGPTFVHD 186

Query: 123 ASNSPMSPAQYGDPYALLEDERISQIAPHVN 153
           AS   +SP QY DPYALLEDERISQIAP +N
Sbjct: 187 ASKMAISPPQYVDPYALLEDERISQIAPRLN 217

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388522639|gb|AFK49381.1| unknown [Medicago truncatula]

 Score =  233 bits (594), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 112/151 (74%), Positives = 127/151 (84%)

Query: 3   KPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLA 62
           +PPESLF+KELKRRGMTPTSLLED  +T+ G+D++  + EED GF  R TVST ID+ L 
Sbjct: 64  EPPESLFLKELKRRGMTPTSLLEDYKQTNCGVDEEAFVNEEDRGFLNRKTVSTNIDRGLE 123

Query: 63  DQRERSMALNSEGLEGLVPRAKLLLTLGGTFFLGFWPLILVTVGFFSALYFYFGPTFVHD 122
           +QRERSMALNSEGLEGLVPRAKLLLTLGGTFFL F PLIL+TV FFSALYFYFGP+F+H 
Sbjct: 124 NQRERSMALNSEGLEGLVPRAKLLLTLGGTFFLAFGPLILITVAFFSALYFYFGPSFIHV 183

Query: 123 ASNSPMSPAQYGDPYALLEDERISQIAPHVN 153
            S   +SP QY DPYALLEDERISQIAP +N
Sbjct: 184 GSKMSISPPQYVDPYALLEDERISQIAPRLN 214

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060907|ref|XP_002300286.1| predicted protein [Populus trichocarpa] gi|222847544|gb|EEE85091.1| predicted protein [Populus trichocarpa]

 Score =  232 bits (591), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 110/150 (73%), Positives = 131/150 (87%)

Query: 3   KPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLA 62
           +PPESLFMKELKRRGMTPTSLLE+++R + G++D+ K+ EED GFS+RN+VSTEID+ L+
Sbjct: 3   EPPESLFMKELKRRGMTPTSLLEETNRGNYGVEDEMKIGEEDWGFSKRNSVSTEIDRGLS 62

Query: 63  DQRERSMALNSEGLEGLVPRAKLLLTLGGTFFLGFWPLILVTVGFFSALYFYFGPTFVHD 122
           DQRERSMALNSEGLEGL+PRAKLLLT+GG FFLGFWPLIL+ V  FSALY  FG +FVHD
Sbjct: 63  DQRERSMALNSEGLEGLIPRAKLLLTIGGAFFLGFWPLILIIVASFSALYSCFGSSFVHD 122

Query: 123 ASNSPMSPAQYGDPYALLEDERISQIAPHV 152
            S++P SP Q+ DPY LLEDERISQIAP +
Sbjct: 123 GSDAPTSPPQHIDPYELLEDERISQIAPSL 152

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388519125|gb|AFK47624.1| unknown [Lotus japonicus]

 Score =  223 bits (568), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 109/149 (73%), Positives = 123/149 (82%)

Query: 5   PESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLADQ 64
           PESLFMKELKRRGM PTSLLED  ++ + LD++  + EED G  +R+ VST I++ L +Q
Sbjct: 67  PESLFMKELKRRGMNPTSLLEDYKQSSNVLDEEVYVNEEDRGSPKRSAVSTNIERGLENQ 126

Query: 65  RERSMALNSEGLEGLVPRAKLLLTLGGTFFLGFWPLILVTVGFFSALYFYFGPTFVHDAS 124
           RERSMALNSEGLEGLVPRAKLLLTLGGTFFL F PLILVTV  FSALYFYFGP+FVHD S
Sbjct: 127 RERSMALNSEGLEGLVPRAKLLLTLGGTFFLAFGPLILVTVALFSALYFYFGPSFVHDGS 186

Query: 125 NSPMSPAQYGDPYALLEDERISQIAPHVN 153
           N  +SP QY DPY LLEDERISQIAP +N
Sbjct: 187 NMSLSPPQYVDPYELLEDERISQIAPRLN 215

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312282351|dbj|BAJ34041.1| unnamed protein product [Thellungiella halophila]

 Score =  194 bits (492), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 101/152 (66%), Positives = 119/152 (78%), Gaps = 6/152 (3%)

Query: 3   KPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVST-EIDKSL 61
           +PPESLFMKELKRRGMTPTSLL+D    +  +D+    KE   G S + T +T   D+SL
Sbjct: 66  EPPESLFMKELKRRGMTPTSLLQD---YEVDVDEVKTGKE--TGNSTKTTATTPAFDQSL 120

Query: 62  ADQRERSMALNSEGLEGLVPRAKLLLTLGGTFFLGFWPLILVTVGFFSALYFYFGPTFVH 121
            +QRERS+ALNSEGLEGL+PRAK+LLT+GGTFFLGFWPLI++T+G FSALY YFG  FVH
Sbjct: 121 LNQRERSLALNSEGLEGLIPRAKILLTIGGTFFLGFWPLIVLTLGAFSALYLYFGADFVH 180

Query: 122 DASNSPMSPAQYGDPYALLEDERISQIAPHVN 153
           D S +P+SP  Y DPYALLEDERIS I P VN
Sbjct: 181 DGSRTPVSPPPYIDPYALLEDERISGIDPRVN 212

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297852692|ref|XP_002894227.1| hypothetical protein ARALYDRAFT_474138 [Arabidopsis lyrata subsp. lyrata] gi|297340069|gb|EFH70486.1| hypothetical protein ARALYDRAFT_474138 [Arabidopsis lyrata subsp. lyrata]

 Score =  193 bits (491), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 96/151 (63%), Positives = 115/151 (76%), Gaps = 4/151 (2%)

Query: 3   KPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLA 62
           +PPESLFMKELKRRGMTPTSLL+D         D+ K  +E    S+    S   DKSL 
Sbjct: 66  EPPESLFMKELKRRGMTPTSLLQDYEVDQ----DEIKTDKETGNSSKTTATSPAFDKSLL 121

Query: 63  DQRERSMALNSEGLEGLVPRAKLLLTLGGTFFLGFWPLILVTVGFFSALYFYFGPTFVHD 122
           +QRERS+ALNSEGLEGL+PRA++LLT+GGTFFLGFWPLI++T+G FSALY YFG  F+HD
Sbjct: 122 NQRERSLALNSEGLEGLIPRARILLTIGGTFFLGFWPLIVLTLGAFSALYLYFGADFIHD 181

Query: 123 ASNSPMSPAQYGDPYALLEDERISQIAPHVN 153
            S +P+SP  Y DPYALLEDERIS + P +N
Sbjct: 182 GSRTPVSPPPYIDPYALLEDERISGMNPRLN 212

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
TAIR|locus:2031010	209	AT1G50020 "AT1G50020" [Arabido	0.954	0.698	0.578	9.9e-39

TAIR|locus:2031010 AT1G50020 "AT1G50020" [Arabidopsis thaliana (taxid:3702)]

 Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
 Identities = 88/152 (57%), Positives = 106/152 (69%)

Query:     3 KPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTE-IDKSL 61
             +PPESLFMKELKRRGMTPTSLL+D    D    D+ K  +E  G S + T +T   DKSL
Sbjct:    63 EPPESLFMKELKRRGMTPTSLLQDYE-VDQ---DEIKTGKET-GNSSKTTATTPAFDKSL 117

Query:    62 ADQRERSMALNSEGLEGLVPRAKXXXXXXXXXXXXXWPLILVTVGFFSALYFYFGPTFVH 121
              +QRERS+ALNSEGLEGL+PRA+             WPLI++T+G FSALY YFG  F+H
Sbjct:   118 LNQRERSLALNSEGLEGLIPRARILLTIGGTFFLGFWPLIVLTLGAFSALYLYFGADFIH 177

Query:   122 DASNSPMSPAQYGDPYALLEDERISQIAPHVN 153
             D S +P+SP  Y DPYALLEDERIS + P +N
Sbjct:   178 DGSRTPVSPPPYIDPYALLEDERISGMDPRLN 209


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.132   0.378    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      153       140   0.00091  102 3  11 23  0.48    31
                                                     30  0.46    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  532 (57 KB)
  Total size of DFA:  114 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.61u 0.11s 14.72t   Elapsed:  00:00:01
  Total cpu time:  14.61u 0.11s 14.72t   Elapsed:  00:00:01
  Start:  Thu May  9 23:19:33 2013   End:  Thu May  9 23:19:34 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00