Citrus Sinensis ID: 031919

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Protein Sequence
MVISSSLALSLSSSSSFLSTRPPSPHFLSLSSSRSSFFTNLKTNSLVVGPRGGSGKGRKGFTCYALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDPPGEKPTAISEERKDEGKISSSKESV
Secondary Structure (PSIPRED)
ccccccHHHHcccccccccccccccccccccccccccccccccccEEccccccccccccccEEEEcccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccEEEHHHHcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MVISSSlalslsssssflstrppsphflslsssrssfftnlktnslvvgprggsgkgrkgftcyalfglgvPELVVIAGVAALvfgpkklpevgKSIGKTVKSFQQAAKEFESElkkepdsetdppgekptaiseerkdegkissskesv
Flexible Loop (DISEMBL)
MVISSSLALSLSSSSSFLSTRPPSPHFLSLSSSRSSFFTNLKtnslvvgprggsgkgRKGFTCYALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFEselkkepdsetdppgekptaiseerkdegkissskesv
Low Complexity Region (SEG)
MVIssslalslsssssflsTrppsphflslsssrssffTNLKTNSLVVgprggsgkgrkgFTCYALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDPPGEKPTAISEERKDEGKISSSKESV
Disordered region (IsUnstruct)
****************************************LKTNSLVVG******KGRKGFTCYALFGLGVPELVVIAGVAALVFGPKKLP***********************************************************
Disordered Region (DISOPRED)
***************************************************************YALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVK************************************************
Disordered Region (DISEMBL)
****************************SLSSSRSSFFTNLKTNSLVVGPRGGSGKGRKGFTCYALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSF**********************************************
Disordered Region (DISPRO)
*********************************RSSFFTNLKTNSLVVG*R*GSGKGRKGFTCYALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPD******************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVISSSLALSLSSSSSFLSTRPPSPHFLSLSSSRSSFFTNLKTNSLVVGPRGGSGKGRKGFTCYALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDPPGEKPTAISEERKDEGKISSSKESV
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	150	2.2.26 [Sep-21-2011]
Q9XH46	137	Sec-independent protein t	N/A	no	0.58	0.635	0.728	2e-30
Q9LKU2	147	Sec-independent protein t	yes	no	0.72	0.734	0.651	2e-28
Q9XFJ8	170	Sec-independent protein t	N/A	no	0.58	0.511	0.715	4e-26
Q75GK3	170	Sec-independent protein t	yes	no	0.58	0.511	0.719	4e-25
Q5N2J3	91	Sec-independent protein t	yes	no	0.42	0.692	0.555	4e-15
Q31RR1	91	Sec-independent protein t	yes	no	0.42	0.692	0.555	4e-15
Q8DJ44	77	Sec-independent protein t	yes	no	0.46	0.896	0.472	1e-13
Q110N2	87	Sec-independent protein t	yes	no	0.353	0.609	0.547	4e-13
A8G311	86	Sec-independent protein t	yes	no	0.493	0.860	0.423	2e-12
A3PB74	88	Sec-independent protein t	yes	no	0.493	0.840	0.437	4e-12

>sp|Q9XH46|TATA_PEA Sec-independent protein translocase protein TATA, chloroplastic OS=Pisum sativum GN=TATA PE=1 SV=1

 Score =  131 bits (329), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/92 (72%), Positives = 78/92 (84%), Gaps = 5/92 (5%)

Query: 59  KGFTCYALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE 118
           KGFTC A FGLGVPELVVIAGVAALVFGPKKLPEVG+SIG+TVKSFQQAAKEFE+ELKKE
Sbjct: 51  KGFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKE 110

Query: 119 PDSETDPPGEKPTAISEERKDEGKISSSKESV 150
           P+     P E+ +  SE+ K E K+SS+K++V
Sbjct: 111 PN-----PTEEISVASEQEKQEIKVSSTKDNV 137

Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across the thylakoid membrane. Involved in delta pH-dependent protein transport required for chloroplast development, especially thylakoid membrane formation. TATC and TATB mediate precursor recognition, whereas TATA facilitates translocation.
Pisum sativum (taxid: 3888)

>sp|Q9LKU2|TATA_ARATH Sec-independent protein translocase protein TATA, chloroplastic OS=Arabidopsis thaliana GN=TATA PE=1 SV=1

 Score =  124 bits (312), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/109 (65%), Positives = 78/109 (71%), Gaps = 1/109 (0%)

Query: 43  TNSLV-VGPRGGSGKGRKGFTCYALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTV 101
           T SLV +G R      RK  TC ALFGLGVPEL VIAGVAAL+FGPKKLPE+GKSIGKTV
Sbjct: 39  TRSLVAIGRRIRQEPTRKPLTCNALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTV 98

Query: 102 KSFQQAAKEFESELKKEPDSETDPPGEKPTAISEERKDEGKISSSKESV 150
           KSFQQAAKEFESELK EP+       +  T+  EE K     SSSKE+V
Sbjct: 99  KSFQQAAKEFESELKTEPEESVAESSQVATSNKEEEKKTEVSSSSKENV 147

Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across the thylakoid membrane. Involved in delta pH-dependent protein transport required for chloroplast development, especially thylakoid membrane formation. TATC and TATB mediate precursor recognition, whereas TATA facilitates translocation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9XFJ8|TATA_MAIZE Sec-independent protein translocase protein TATA, chloroplastic OS=Zea mays GN=TATA PE=1 SV=1

 Score =  116 bits (291), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 63/88 (71%), Positives = 70/88 (79%), Gaps = 1/88 (1%)

Query: 63  CYALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSE 122
           C  LFGLGVPEL VIAGVAALVFGPK+LPE+G+SIGKTVKSFQQAAKEFE+ELKKEP   
Sbjct: 82  CKCLFGLGVPELAVIAGVAALVFGPKQLPEIGRSIGKTVKSFQQAAKEFETELKKEPGEG 141

Query: 123 TD-PPGEKPTAISEERKDEGKISSSKES 149
            D PP   PTA+S   +   + SSSKES
Sbjct: 142 GDQPPPATPTAVSGGEEKGLEASSSKES 169

Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across the thylakoid membrane. Involved in delta pH-dependent protein transport required for chloroplast development, especially thylakoid membrane formation. TATC and TATB mediate precursor recognition, whereas TATA facilitates translocation.

Zea mays (taxid: 4577)

>sp|Q75GK3|TATA_ORYSJ Sec-independent protein translocase protein TATA, chloroplastic OS=Oryza sativa subsp. japonica GN=TATA PE=2 SV=1

 Score =  113 bits (283), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 64/89 (71%), Positives = 73/89 (82%), Gaps = 2/89 (2%)

Query: 63  CYALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSE 122
           C  LFGLGVPELVVIAGVAALVFGPK+LPE+G+SIGKTVKSFQQAAKEFE+ELKKE D  
Sbjct: 81  CKCLFGLGVPELVVIAGVAALVFGPKQLPEIGRSIGKTVKSFQQAAKEFETELKKESDDG 140

Query: 123 TD-PPGEKPTAISEERKD-EGKISSSKES 149
            D PP    TA+S+  ++ E + SSSKES
Sbjct: 141 GDQPPPPTETAVSDGGEEKELEASSSKES 169

Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across the thylakoid membrane. Involved in delta pH-dependent protein transport required for chloroplast development, especially thylakoid membrane formation. TATC and TATB mediate precursor recognition, whereas TATA facilitates translocation.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q5N2J3|TATA_SYNP6 Sec-independent protein translocase protein TatA OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=tatA PE=3 SV=1

 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 35/63 (55%), Positives = 49/63 (77%)

Query: 66  LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDP 125
            FG+G+PE++VI  +A LVFGPKKLPE+G+S+GK ++ FQ A++EFESE+K+E D     
Sbjct: 3   FFGIGLPEMLVILAIALLVFGPKKLPEIGRSLGKALRGFQDASREFESEIKREIDRTPAT 62

Query: 126 PGE 128
           P E
Sbjct: 63  PAE 65

Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.

Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (taxid: 269084)

>sp|Q31RR1|TATA_SYNE7 Sec-independent protein translocase protein TatA OS=Synechococcus elongatus (strain PCC 7942) GN=tatA PE=3 SV=1

 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 35/63 (55%), Positives = 49/63 (77%)

Query: 66  LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDP 125
            FG+G+PE++VI  +A LVFGPKKLPE+G+S+GK ++ FQ A++EFESE+K+E D     
Sbjct: 3   FFGIGLPEMLVILAIALLVFGPKKLPEIGRSLGKALRGFQDASREFESEIKREIDRTPAT 62

Query: 126 PGE 128
           P E
Sbjct: 63  PAE 65

Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.

Synechococcus elongatus (strain PCC 7942) (taxid: 1140)

>sp|Q8DJ44|TATA_THEEB Sec-independent protein translocase protein TatA OS=Thermosynechococcus elongatus (strain BP-1) GN=tatA PE=3 SV=1

 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 54/74 (72%), Gaps = 5/74 (6%)

Query: 66  LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKK-----EPD 120
           +FG+G+PEL+VI  VA L+FGPKKLPE+G+S+GKT ++F++A++EF+ E+K+     E +
Sbjct: 3   VFGIGLPELIVILVVALLIFGPKKLPEIGRSLGKTKRAFEEASREFQDEIKRQTAALEEE 62

Query: 121 SETDPPGEKPTAIS 134
            +     E P  IS
Sbjct: 63  QQAKAEAESPREIS 76

Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.

Thermosynechococcus elongatus (strain BP-1) (taxid: 197221)

>sp|Q110N2|TATA_TRIEI Sec-independent protein translocase protein TatA OS=Trichodesmium erythraeum (strain IMS101) GN=tatA PE=3 SV=1

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 45/53 (84%)

Query: 66  LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE 118
           +FG+G+PE++VI  VA L+FGPKKLPE+G+S+G+ + SF+  A++FE+E K+E
Sbjct: 3   IFGIGLPEMIVILVVALLIFGPKKLPEIGRSLGQAINSFKAGARDFENEFKRE 55

Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.

Trichodesmium erythraeum (strain IMS101) (taxid: 203124)

>sp|A8G311|TATA_PROM2 Sec-independent protein translocase protein TatA OS=Prochlorococcus marinus (strain MIT 9215) GN=tatA PE=3 SV=1

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 55/78 (70%), Gaps = 4/78 (5%)

Query: 66  LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDP 125
           +FG+G+PE+ VI  +A L+FGPKKLPE+GK +GKT+KS ++A+ EF++E+ +  + E + 
Sbjct: 3   IFGVGLPEVTVILILALLIFGPKKLPELGKQLGKTLKSLKKASNEFQNEIDQVMNEEDES 62

Query: 126 P----GEKPTAISEERKD 139
           P      +   I++E+ D
Sbjct: 63  PKSIESNQTNEINQEKID 80

Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.

Prochlorococcus marinus (strain MIT 9215) (taxid: 93060)

>sp|A3PB74|TATA_PROM0 Sec-independent protein translocase protein TatA OS=Prochlorococcus marinus (strain MIT 9301) GN=tatA PE=3 SV=1

 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 55/80 (68%), Gaps = 6/80 (7%)

Query: 66  LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELK---KEPDSE 122
           +FG+G+PE+ VI  +A L+FGPKKLPE+GK +GKT+KS ++A+ EF++E+    KE D +
Sbjct: 3   IFGVGLPEVTVILILALLIFGPKKLPELGKQLGKTLKSLKKASNEFQNEIDQVMKEEDKD 62

Query: 123 TDP---PGEKPTAISEERKD 139
             P      +   I++E+ D
Sbjct: 63  ESPKSIESNQSNEINQEKID 82

Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.

Prochlorococcus marinus (strain MIT 9301) (taxid: 167546)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	150
255580951	149	conserved hypothetical protein [Ricinus	0.906	0.912	0.647	5e-41
224123416	150	predicted protein [Populus trichocarpa]	0.893	0.893	0.640	4e-38
224131274	148	predicted protein [Populus trichocarpa]	0.793	0.804	0.656	6e-36
388512267	144	unknown [Medicago truncatula]	0.606	0.631	0.802	3e-32
449435744	158	PREDICTED: sec-independent protein trans	0.8	0.759	0.612	4e-31
225451346	136	PREDICTED: sec-independent protein trans	0.713	0.786	0.663	5e-31
449529303	146	PREDICTED: sec-independent protein trans	0.8	0.821	0.612	6e-31
356505957	143	PREDICTED: uncharacterized protein LOC10	0.646	0.678	0.696	8e-31
351722619	142	uncharacterized protein LOC100306385 [Gl	0.646	0.683	0.707	3e-30
388519593	147	unknown [Lotus japonicus]	0.826	0.843	0.616	4e-30

>gi|255580951|ref|XP_002531294.1| conserved hypothetical protein [Ricinus communis] gi|223529127|gb|EEF31107.1| conserved hypothetical protein [Ricinus communis]

 Score =  172 bits (435), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 101/156 (64%), Positives = 114/156 (73%), Gaps = 20/156 (12%)

Query: 5   SSLALSLSSSSSFLSTRPPSPHFLSLSSSRSSFFTN---LKTN------SLVVG-PRGGS 54
           SS+ LSLS        RP   H    SSS S+FF N   L TN      +LV+G  R  +
Sbjct: 4   SSMTLSLS--------RPT--HAFPFSSSHSTFFNNANLLNTNKKLSNKTLVLGKTRSRT 53

Query: 55  GKGRKGFTCYALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESE 114
            + RKG TC ALFGLGVPELVVIAGVAALVFGPKKLPEVG+SIGKTVKSFQ+AAKEFESE
Sbjct: 54  ERTRKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQEAAKEFESE 113

Query: 115 LKKEPDSETDPPGEKPTAISEERKDEGKISSSKESV 150
           LKKEPDS  + PGE PTAISEE+K + ++SSSKESV
Sbjct: 114 LKKEPDSALESPGETPTAISEEKKQDAEVSSSKESV 149

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123416|ref|XP_002319073.1| predicted protein [Populus trichocarpa] gi|118483502|gb|ABK93649.1| unknown [Populus trichocarpa] gi|222857449|gb|EEE94996.1| predicted protein [Populus trichocarpa]

 Score =  162 bits (410), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 91/142 (64%), Positives = 105/142 (73%), Gaps = 8/142 (5%)

Query: 15  SSFLSTRPPSPHFLSLSSSRSSFFTNLK-------TNSLVVG-PRGGSGKGRKGFTCYAL 66
           SS   + P  P  L  SSS S+FF            NSLV+G    GS + +KG TC AL
Sbjct: 6   SSVTLSLPKPPRSLPFSSSNSTFFNTTAFFNKTKSCNSLVLGKTTSGSQRAKKGLTCNAL 65

Query: 67  FGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDPP 126
           FGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTV+SFQQAAKEFESELKKEP+SE + P
Sbjct: 66  FGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVRSFQQAAKEFESELKKEPESEPETP 125

Query: 127 GEKPTAISEERKDEGKISSSKE 148
           GE+P AI EE+K + ++SS+KE
Sbjct: 126 GEQPKAIIEEKKQDVEVSSTKE 147

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131274|ref|XP_002328498.1| predicted protein [Populus trichocarpa] gi|118482145|gb|ABK93003.1| unknown [Populus trichocarpa] gi|222838213|gb|EEE76578.1| predicted protein [Populus trichocarpa]

 Score =  155 bits (392), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 84/128 (65%), Positives = 96/128 (75%), Gaps = 9/128 (7%)

Query: 22  PPSPHFLSLSSSRSSFFTNLK--------TNSLVVG-PRGGSGKGRKGFTCYALFGLGVP 72
           P  P  L  SSS+S+FF             NSLV+G  R  S + +KG TC ALFGLGVP
Sbjct: 11  PKPPPCLPFSSSQSTFFNTTAFFNKSSKSYNSLVLGKTRSRSQRAKKGLTCNALFGLGVP 70

Query: 73  ELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDPPGEKPTA 132
           ELVVIAGVA L+FGPK+LPEVG+SIGKTVKSFQQAAKEFESELKKEPDS +D PGE+PT 
Sbjct: 71  ELVVIAGVATLLFGPKQLPEVGRSIGKTVKSFQQAAKEFESELKKEPDSTSDTPGEQPTT 130

Query: 133 ISEERKDE 140
           ISEE+K +
Sbjct: 131 ISEEKKHD 138

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388512267|gb|AFK44195.1| unknown [Medicago truncatula]

 Score =  143 bits (360), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 73/91 (80%), Positives = 80/91 (87%)

Query: 60  GFTCYALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEP 119
           GFTC ALFGLGVPELVVIAGVAA+VFGPKKLPEVG+SIGKTVKSFQQAAKEFESELKKEP
Sbjct: 54  GFTCNALFGLGVPELVVIAGVAAIVFGPKKLPEVGRSIGKTVKSFQQAAKEFESELKKEP 113

Query: 120 DSETDPPGEKPTAISEERKDEGKISSSKESV 150
            S    P EK  A+SEE+K + ++SSSKESV
Sbjct: 114 GSSGGEPSEKSIAVSEEKKQDTEVSSSKESV 144

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435744|ref|XP_004135654.1| PREDICTED: sec-independent protein translocase protein TATA, chloroplastic-like [Cucumis sativus]

 Score =  139 bits (350), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 76/124 (61%), Positives = 90/124 (72%), Gaps = 4/124 (3%)

Query: 31  SSSRSSFFTNLKTNS----LVVGPRGGSGKGRKGFTCYALFGLGVPELVVIAGVAALVFG 86
           +++ +SFFT    N      +   R  +    KGFTC ALFGLGVPELVVIAGVAALVFG
Sbjct: 35  NNATTSFFTYGDHNHSSLLRLTSFRTTTKTTHKGFTCNALFGLGVPELVVIAGVAALVFG 94

Query: 87  PKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDPPGEKPTAISEERKDEGKISSS 146
           PKKLPEVGKSIGKTVKSFQQAAKEFESELKKEP+   +   EKPT+   E + + K+S+ 
Sbjct: 95  PKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPEPTEETSVEKPTSTEAEERQDLKVSNQ 154

Query: 147 KESV 150
           KE+V
Sbjct: 155 KETV 158

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225451346|ref|XP_002279607.1| PREDICTED: sec-independent protein translocase protein TatA [Vitis vinifera] gi|298204852|emb|CBI34159.3| unnamed protein product [Vitis vinifera]

 Score =  139 bits (349), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 71/107 (66%), Positives = 84/107 (78%)

Query: 44  NSLVVGPRGGSGKGRKGFTCYALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKS 103
            +LVV       + +K  TC  LFGLGVPELVVIAGVAALVFGPKKLPEVG+SIGKTVKS
Sbjct: 30  KTLVVARSRTRIRTQKRLTCTCLFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKS 89

Query: 104 FQQAAKEFESELKKEPDSETDPPGEKPTAISEERKDEGKISSSKESV 150
           FQQAAKEFE+ELKKEP S T+ P E P  +SEE++ + ++SS KES+
Sbjct: 90  FQQAAKEFETELKKEPASVTEAPVETPATLSEEKEKDVEVSSKKESL 136

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449529303|ref|XP_004171639.1| PREDICTED: sec-independent protein translocase protein TATA, chloroplastic-like, partial [Cucumis sativus]

 Score =  138 bits (348), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 76/124 (61%), Positives = 90/124 (72%), Gaps = 4/124 (3%)

Query: 31  SSSRSSFFTNLKTNS----LVVGPRGGSGKGRKGFTCYALFGLGVPELVVIAGVAALVFG 86
           +++ +SFFT    N      +   R  +    KGFTC ALFGLGVPELVVIAGVAALVFG
Sbjct: 23  NNATTSFFTYGDHNHSSLLRLTSFRTTTKTTHKGFTCNALFGLGVPELVVIAGVAALVFG 82

Query: 87  PKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDPPGEKPTAISEERKDEGKISSS 146
           PKKLPEVGKSIGKTVKSFQQAAKEFESELKKEP+   +   EKPT+   E + + K+S+ 
Sbjct: 83  PKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPEPTEETSVEKPTSTEAEERQDLKVSNQ 142

Query: 147 KESV 150
           KE+V
Sbjct: 143 KETV 146

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505957|ref|XP_003521755.1| PREDICTED: uncharacterized protein LOC100797959 [Glycine max]

 Score =  138 bits (347), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 69/99 (69%), Positives = 85/99 (85%), Gaps = 2/99 (2%)

Query: 54  SGKGR-KGFTCYALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 112
           +G+ R KG +C A+FGLGVPELVVIAGVAALVFGPKKLPEVG+SIGKTVKSFQQAAKEFE
Sbjct: 45  NGRRRNKGLSCNAMFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFE 104

Query: 113 SELKKEPDSETDPPGEKP-TAISEERKDEGKISSSKESV 150
           SELKKEPDS      EKP   ++E+++++ ++S+SKE+V
Sbjct: 105 SELKKEPDSTQGDSSEKPIVTVTEQQQEDNEVSTSKETV 143

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351722619|ref|NP_001238018.1| uncharacterized protein LOC100306385 [Glycine max] gi|255628373|gb|ACU14531.1| unknown [Glycine max]

 Score =  136 bits (343), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 70/99 (70%), Positives = 84/99 (84%), Gaps = 2/99 (2%)

Query: 54  SGKGR-KGFTCYALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 112
           +G+GR KG +C A+FGLGVPELVVIAGVAALVFGPKKLPEVG+SIGKTVKSFQQAAKEFE
Sbjct: 44  NGRGRNKGLSCNAMFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFE 103

Query: 113 SELKKEPDSETDPPGEKPTAISE-ERKDEGKISSSKESV 150
           SELKKEPDS      EK   +SE +++ + ++S+SKE+V
Sbjct: 104 SELKKEPDSTEGDSSEKSIVVSEKQQQQDNEVSTSKETV 142

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388519593|gb|AFK47858.1| unknown [Lotus japonicus]

 Score =  135 bits (341), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 82/133 (61%), Positives = 98/133 (73%), Gaps = 9/133 (6%)

Query: 20  TRPPSPHFLSLSSSRSSFFTNLKTNS--LVVGPRGGSGKGRKGFTCYALFGLGVPELVVI 77
           TRP S + L+ SSS    F ++ + +  +   PR    KG    TC ALFGLGVPELVVI
Sbjct: 22  TRPSSVNNLAFSSS----FRSIASVAPPITTTPRR-RNKG-TALTCNALFGLGVPELVVI 75

Query: 78  AGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDPPGEKPTAISEER 137
           AGVAA+VFGPKKLPEVG+SIGKT+KSFQQAAKEFE+ELKKEPDS      E+P A+SE+ 
Sbjct: 76  AGVAAIVFGPKKLPEVGRSIGKTLKSFQQAAKEFETELKKEPDS-IGGQSEEPLAVSEQE 134

Query: 138 KDEGKISSSKESV 150
           K E ++SSSKESV
Sbjct: 135 KQETEVSSSKESV 147

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	150
UNIPROTKB|Q9XH46	137	TATA "Sec-independent protein	0.713	0.781	0.616	3.4e-29
TAIR|locus:2184241	147	AT5G28750 [Arabidopsis thalian	0.593	0.605	0.707	9.4e-27
UNIPROTKB|Q9XFJ8	170	TATA "Sec-independent protein	0.58	0.511	0.715	1.9e-26
UNIPROTKB|O48950	243	TATB "Sec-independent protein	0.506	0.312	0.388	3.4e-10
TIGR_CMR|GSU_0022	111	GSU_0022 "mttA/Hcf106 family p	0.486	0.657	0.378	5.2e-10
TIGR_CMR|CHY_2570	53	CHY_2570 "twin-arginine transl	0.313	0.886	0.468	1.1e-09
TIGR_CMR|CHY_0870	62	CHY_0870 "twin-arginine transl	0.38	0.919	0.448	1.4e-09
TIGR_CMR|GSU_3190	63	GSU_3190 "twin-arginine transl	0.393	0.936	0.383	4.7e-09
UNIPROTKB|Q94G16	261	TATB "Sec-independent protein	0.413	0.237	0.472	5e-09
TIGR_CMR|CHY_0865	66	CHY_0865 "twin-arginine transl	0.393	0.893	0.4	5.9e-09

UNIPROTKB|Q9XH46 TATA "Sec-independent protein translocase protein TATA, chloroplastic" [Pisum sativum (taxid:3888)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 69/112 (61%), Positives = 84/112 (75%)

Query:    39 TNLKTNSLVVXXXXXXXXXXXXFTCYALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIG 98
             +N  T+SL++            FTC A FGLGVPELVVIAGVAALVFGPKKLPEVG+SIG
Sbjct:    31 SNSNTSSLLLKKARIKTRTTKGFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIG 90

Query:    99 KTVKSFQQAAKEFESELKKEPDSETDPPGEKPTAISEERKDEGKISSSKESV 150
             +TVKSFQQAAKEFE+ELKKEP+     P E+ +  SE+ K E K+SS+K++V
Sbjct:    91 QTVKSFQQAAKEFETELKKEPN-----PTEEISVASEQEKQEIKVSSTKDNV 137

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009977 "proton motive force dependent protein transmembrane transporter activity" evidence=IMP

GO:0031361 "integral to thylakoid membrane" evidence=IDA

GO:0033281 "TAT protein transport complex" evidence=IDA

GO:0043953 "protein transport by the Tat complex" evidence=IDA

GO:0045038 "protein import into chloroplast thylakoid membrane" evidence=IDA

TAIR|locus:2184241 AT5G28750 [Arabidopsis thaliana (taxid:3702)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 63/89 (70%), Positives = 69/89 (77%)

Query:    62 TCYALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDS 121
             TC ALFGLGVPEL VIAGVAAL+FGPKKLPE+GKSIGKTVKSFQQAAKEFESELK EP+ 
Sbjct:    59 TCNALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFESELKTEPEE 118

Query:   122 ETDPPGEKPTAISEERKDEGKISSSKESV 150
                   +  T+  EE K     SSSKE+V
Sbjct:   119 SVAESSQVATSNKEEEKKTEVSSSSKENV 147

GO:0008565 "protein transporter activity" evidence=IEA;ISS

GO:0009306 "protein secretion" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0015031 "protein transport" evidence=IEA;ISS

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0033281 "TAT protein transport complex" evidence=IDA

UNIPROTKB|Q9XFJ8 TATA "Sec-independent protein translocase protein TATA, chloroplastic" [Zea mays (taxid:4577)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 63/88 (71%), Positives = 70/88 (79%)

Query:    63 CYALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSE 122
             C  LFGLGVPEL VIAGVAALVFGPK+LPE+G+SIGKTVKSFQQAAKEFE+ELKKEP   
Sbjct:    82 CKCLFGLGVPELAVIAGVAALVFGPKQLPEIGRSIGKTVKSFQQAAKEFETELKKEPGEG 141

Query:   123 TD-PPGEKPTAISEERKDEGKISSSKES 149
              D PP   PTA+S   +   + SSSKES
Sbjct:   142 GDQPPPATPTAVSGGEEKGLEASSSKES 169

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009977 "proton motive force dependent protein transmembrane transporter activity" evidence=IMP

GO:0031361 "integral to thylakoid membrane" evidence=IDA

GO:0043953 "protein transport by the Tat complex" evidence=IMP

GO:0045038 "protein import into chloroplast thylakoid membrane" evidence=IMP

UNIPROTKB|O48950 TATB "Sec-independent protein translocase protein TATB, chloroplastic" [Zea mays (taxid:4577)]

 Score = 146 (56.5 bits), Expect = 3.4e-10, P = 3.4e-10
 Identities = 33/85 (38%), Positives = 52/85 (61%)

Query:    63 CYALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQ-------QAAKEFESEL 115
             C +LFG+G PE +VI  VA LVFGPK L EV +++GKT+++FQ         ++EF S L
Sbjct:    67 CASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFRSTL 126

Query:   116 KKEP--DSETDPPGEKPTAISEERK 138
             ++E   D  +     +PT ++  ++
Sbjct:   127 EREIGIDEVSQSTNYRPTTMNNNQQ 151

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009977 "proton motive force dependent protein transmembrane transporter activity" evidence=IDA

GO:0043953 "protein transport by the Tat complex" evidence=IDA

GO:0045038 "protein import into chloroplast thylakoid membrane" evidence=IMP;IDA

TIGR_CMR|GSU_0022 GSU_0022 "mttA/Hcf106 family protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 28/74 (37%), Positives = 49/74 (66%)

Query:    66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDS-ETD 124
             +FG+G+PEL+VI  +A +V GP+KLP++ +S+GK +  F++A+ +F+  L +E  + +  
Sbjct:     1 MFGIGMPELIVILVIALIVIGPQKLPDIARSLGKGLAEFKRASDDFQRNLAEEVRTLDEK 60

Query:   125 PPGEKPTAISEERK 138
                EK  A +E  K
Sbjct:    61 EKAEKGEAAAEPVK 74

GO:0006886 "intracellular protein transport" evidence=ISS

GO:0008565 "protein transporter activity" evidence=ISS

GO:0009306 "protein secretion" evidence=ISS

TIGR_CMR|CHY_2570 CHY_2570 "twin-arginine translocation protein, TatA/E family" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 22/47 (46%), Positives = 37/47 (78%)

Query:    69 LGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESEL 115
             +G+PEL++I  +A ++FGP KLPE+G++ GKT+K F++ A E + E+
Sbjct:     5 IGIPELLIILVIALVIFGPAKLPEIGRAFGKTIKEFKKEATEIQKEI 51

GO:0006886 "intracellular protein transport" evidence=ISS

GO:0008565 "protein transporter activity" evidence=ISS

GO:0009306 "protein secretion" evidence=ISS

TIGR_CMR|CHY_0870 CHY_0870 "twin-arginine translocation protein, TatA/E family" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 26/58 (44%), Positives = 40/58 (68%)

Query:    66 LFG-LGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSE 122
             +FG  G  EL+++  +A ++FGP KLPE+GK+ G+TVK F++ AKE + E+  E   E
Sbjct:     1 MFGNFGWQELLIVLVIALIIFGPSKLPELGKAFGQTVKEFRKGAKEIQDEIALEEAKE 58

GO:0006886 "intracellular protein transport" evidence=ISS

GO:0008565 "protein transporter activity" evidence=ISS

GO:0009306 "protein secretion" evidence=ISS

TIGR_CMR|GSU_3190 GSU_3190 "twin-arginine translocation protein, TatA/E family" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 23/60 (38%), Positives = 45/60 (75%)

Query:    66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDP 125
             +FG G+PEL+VI  +  +VFG  +LPE+G ++GK++++F++A+ E + E++ +P  + +P
Sbjct:     1 MFGFGMPELIVILIIVLVVFGAGRLPEIGGALGKSIRNFKKAS-EGKEEIEIKPQKKDEP 59

GO:0006886 "intracellular protein transport" evidence=ISS

GO:0008565 "protein transporter activity" evidence=ISS

GO:0009306 "protein secretion" evidence=ISS

UNIPROTKB|Q94G16 TATB "Sec-independent protein translocase protein TATB, chloroplastic" [Pisum sativum (taxid:3888)]

 Score = 137 (53.3 bits), Expect = 5.0e-09, P = 5.0e-09
 Identities = 34/72 (47%), Positives = 47/72 (65%)

Query:    64 YA-LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQ-------QAAKEFESEL 115
             YA LFG+G PE +VI  VA LVFGPK L EV +++GKT++ FQ         ++EF+S L
Sbjct:    86 YASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLREFQPTIREIQDVSREFKSTL 145

Query:   116 KKEP--DSETDP 125
             ++E   D  T+P
Sbjct:   146 EREIGIDDITNP 157

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009977 "proton motive force dependent protein transmembrane transporter activity" evidence=IMP

GO:0033281 "TAT protein transport complex" evidence=IDA

GO:0043953 "protein transport by the Tat complex" evidence=IDA

GO:0045038 "protein import into chloroplast thylakoid membrane" evidence=IDA

TIGR_CMR|CHY_0865 CHY_0865 "twin-arginine translocation protein, TatA/E family" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
 Identities = 24/60 (40%), Positives = 41/60 (68%)

Query:    66 LFG-LGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETD 124
             +FG  G  ELVV+  +A ++FGP KLPE+G+++G+ ++ F++A  E E  + KE ++  D
Sbjct:     1 MFGNFGFQELVVVLIIALIIFGPSKLPELGRALGRGIREFKKATTEIEESITKEVNAVKD 60

GO:0006886 "intracellular protein transport" evidence=ISS

GO:0008565 "protein transporter activity" evidence=ISS

GO:0009306 "protein secretion" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q75GK3	TATA_ORYSJ	No assigned EC number	0.7191	0.58	0.5117	yes	no
Q9LKU2	TATA_ARATH	No assigned EC number	0.6513	0.72	0.7346	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.00130402	SubName- Full=Putative uncharacterized protein; (151 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.X.6706.1	hypothetical protein (254 aa)	•		•				•		0.829
	eugene3.57960001	Predicted protein (274 aa)	•		•				•		0.743

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	150
PRK14857	90	PRK14857, tatA, twin arginine translocase protein	3e-23
COG1826	94	COG1826, TatA, Sec-independent protein secretion p	3e-19
TIGR01411	47	TIGR01411, tatAE, twin arginine-targeting protein	3e-16
pfam02416	53	pfam02416, MttA_Hcf106, mttA/Hcf106 family	1e-15
PRK14861	61	PRK14861, tatA, twin arginine translocase protein	3e-15
PRK14860	64	PRK14860, tatA, twin arginine translocase protein	8e-12
PRK14858	108	PRK14858, tatA, twin arginine translocase protein	1e-11
PRK14859	63	PRK14859, tatA, twin arginine translocase protein	2e-11
PRK01371	137	PRK01371, PRK01371, sec-independent translocase; P	5e-09
TIGR01410	80	TIGR01410, tatB, twin arginine-targeting protein t	2e-07
PRK00575	92	PRK00575, tatA, twin arginine translocase protein	2e-07
PRK04598	81	PRK04598, tatA, twin arginine translocase protein	3e-07
PRK02958	73	PRK02958, tatA, twin arginine translocase protein	3e-06
PRK04098	158	PRK04098, PRK04098, sec-independent translocase; P	9e-06
PRK00442	92	PRK00442, tatA, twin arginine translocase protein	3e-05
PRK00191	84	PRK00191, tatA, twin arginine translocase protein	4e-05
PRK01833	74	PRK01833, tatA, twin arginine translocase protein	7e-05
PRK03554	89	PRK03554, tatA, twin arginine translocase protein	1e-04
PRK03625	67	PRK03625, tatE, twin arginine translocase protein	2e-04
PRK00708	209	PRK00708, PRK00708, sec-independent translocase; P	6e-04
PRK04654	214	PRK04654, PRK04654, sec-independent translocase; P	0.002

>gnl|CDD|184859 PRK14857, tatA, twin arginine translocase protein A; Provisional

 Score = 86.7 bits (215), Expect = 3e-23
 Identities = 41/87 (47%), Positives = 59/87 (67%), Gaps = 7/87 (8%)

Query: 67  FGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKK---EPDSET 123
           FG+G+PE+ VI  +A LVFGPKKLPE+G+S+GKT+K FQ+A+KEFE+E+K+   EP+ E 
Sbjct: 4   FGIGLPEMAVILVIALLVFGPKKLPEIGRSLGKTLKGFQEASKEFENEIKREMAEPEQEV 63

Query: 124 DPPGE----KPTAISEERKDEGKISSS 146
             P E    +    ++E+ D      S
Sbjct: 64  KAPAELESNQTNEANQEQVDAENSPES 90

Length = 90

>gnl|CDD|224739 COG1826, TatA, Sec-independent protein secretion pathway components [Intracellular trafficking and secretion]

 Score = 76.7 bits (189), Expect = 3e-19
 Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 1/82 (1%)

Query: 67  FGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE-PDSETDP 125
           FG+G  EL++I  VA LVFGPKKLPE G+ +GK ++ F++AA + ++EL +E    E D 
Sbjct: 2   FGIGWSELLIILVVALLVFGPKKLPEAGRDLGKAIREFKKAASDVKNELDEELKLEELDD 61

Query: 126 PGEKPTAISEERKDEGKISSSK 147
             ++ TA  +  K+E    +S+
Sbjct: 62  KKKELTAELQATKEELDQLASE 83

Length = 94

>gnl|CDD|213616 TIGR01411, tatAE, twin arginine-targeting protein translocase, TatA/E family

 Score = 67.6 bits (166), Expect = 3e-16
 Identities = 25/47 (53%), Positives = 34/47 (72%)

Query: 68  GLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESE 114
           GL  PE ++I  V  L+FG KKLPE+G+ +GK +K F++A KE ESE
Sbjct: 1   GLSPPEWLIILVVVLLLFGAKKLPELGRDLGKAIKEFKKAMKEEESE 47

This model distinguishes TatA/E from the related TatB, but does not distinguish TatA from TatE. The Tat (twin-arginine translocation) system is a Sec-independent exporter for folded proteins, often with a redox cofactor already bound, across the bacterial inner membrane. Functionally equivalent systems are found in the chloroplast and some in archaeal species. The signal peptide recognized by the Tat system is modeled by TIGR01409 [Protein fate, Protein and peptide secretion and trafficking]. Length = 47

>gnl|CDD|145520 pfam02416, MttA_Hcf106, mttA/Hcf106 family

 Score = 66.5 bits (163), Expect = 1e-15
 Identities = 28/50 (56%), Positives = 40/50 (80%)

Query: 69  LGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE 118
           LG PE ++I  VA L+FGPKKLPE+G+++GKT++ F++A KE E E +KE
Sbjct: 1   LGPPEWLIILVVALLLFGPKKLPELGRALGKTLREFKKATKELEEEDEKE 50

Members of this protein family are involved in a sec independent translocation mechanism. This pathway has been called the DeltapH pathway in chloroplasts. Members of this family in E.coli are involved in export of redox proteins with a "twin arginine" leader motif. Length = 53

>gnl|CDD|237837 PRK14861, tatA, twin arginine translocase protein A; Provisional

 Score = 65.4 bits (160), Expect = 3e-15
 Identities = 24/58 (41%), Positives = 39/58 (67%)

Query: 68  GLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDP 125
            +G P L++I  VA ++FGPKKLPE+GK++GKT++ F++A KE   +  +E   +   
Sbjct: 4   NIGFPGLILILVVALIIFGPKKLPELGKALGKTLREFKKATKELTDDDFQEKKKKEKM 61

Length = 61

>gnl|CDD|184862 PRK14860, tatA, twin arginine translocase protein A; Provisional

 Score = 56.7 bits (137), Expect = 8e-12
 Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 66  LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDP 125
           +FG G+PEL+VI  +A +VFGP KLP++G+++G  +++F++A+ E E  +    +   + 
Sbjct: 1   MFGFGMPELIVILVIALVVFGPAKLPQLGQALGGAIRNFKKASNE-EDVVTINNEKGKED 59

Query: 126 PGEKP 130
                
Sbjct: 60  QARSD 64

Length = 64

>gnl|CDD|184860 PRK14858, tatA, twin arginine translocase protein A; Provisional

 Score = 57.6 bits (139), Expect = 1e-11
 Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 6/91 (6%)

Query: 66  LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEF------ESELKKEP 119
           +FG+G+PEL+VI  +A +V GP+KLP++ +S+G+ +  F++A  +F      ES   +E 
Sbjct: 1   MFGIGMPELIVILVIALIVIGPQKLPDLARSLGRGLAEFKKATDDFKQSMQEESRTAEEK 60

Query: 120 DSETDPPGEKPTAISEERKDEGKISSSKESV 150
           +        K  A + E K E   +   +  
Sbjct: 61  EKAEKLAETKKEAEAPEAKAEEDQAPKPKGA 91

Length = 108

>gnl|CDD|184861 PRK14859, tatA, twin arginine translocase protein A; Provisional

 Score = 55.5 bits (134), Expect = 2e-11
 Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 1/58 (1%)

Query: 66  LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFES-ELKKEPDSE 122
           +FG+G+PEL+VI  +  +VFG  KLPE+G  +GK++K+F++A  E E  E+K     +
Sbjct: 1   MFGIGMPELIVILVIVLIVFGAGKLPEIGGGLGKSIKNFKKATSEKEEIEIKPTKKED 58

Length = 63

>gnl|CDD|179287 PRK01371, PRK01371, sec-independent translocase; Provisional

 Score = 51.3 bits (123), Expect = 5e-09
 Identities = 21/52 (40%), Positives = 34/52 (65%)

Query: 67  FGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE 118
           FG+G  ELVV+  +A LVFGP KLP+  +  G+T++  ++ A    ++L+ E
Sbjct: 2   FGIGPGELVVLVVLAVLVFGPDKLPKAARDAGRTLRQLREMANNARNDLRSE 53

Length = 137

>gnl|CDD|130477 TIGR01410, tatB, twin arginine-targeting protein translocase TatB

 Score = 45.8 bits (109), Expect = 2e-07
 Identities = 20/52 (38%), Positives = 35/52 (67%)

Query: 67  FGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE 118
           F +G  EL++IA VA +V GP++LP   +++GK V+  +  A + ++EL +E
Sbjct: 1   FDIGFSELLLIAVVALVVLGPERLPVAIRAVGKFVRRLRGMASDVKNELDEE 52

This model represents the TatB protein of a Sec-independent system for transporting folded proteins, often with a bound redox cofactor, across the bacterial inner membrane. TatC is the multiple membrane spanning component. TatB, like the related TatA/E proteins, appears to span the membrane one time. The tat system recognizes proteins with an elongated signal sequence containing a conserved R-R in a motif approximated by RRxFLK N-terminal to the transmembrane helix. TIGRFAMs model TIGR01409 describes this twin-Arg signal sequence. A similar system, termed Delta-pH-dependent transport, operates on chloroplast-encoded proteins [Protein fate, Protein and peptide secretion and trafficking]. Length = 80

>gnl|CDD|234797 PRK00575, tatA, twin arginine translocase protein A; Provisional

 Score = 45.9 bits (109), Expect = 2e-07
 Identities = 19/65 (29%), Positives = 33/65 (50%)

Query: 68  GLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDPPG 127
            L      ++A V  L+FG KKLP+  +S+GK+++ F+   KE +S+ K E  +      
Sbjct: 3   SLSPWHWAILAVVVILLFGAKKLPDAARSLGKSLRIFKSEVKEMQSDNKAEASAAAAQAP 62

Query: 128 EKPTA 132
            +   
Sbjct: 63  YQVAT 67

Length = 92

>gnl|CDD|179867 PRK04598, tatA, twin arginine translocase protein A; Provisional

 Score = 45.2 bits (107), Expect = 3e-07
 Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 3/76 (3%)

Query: 68  GLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDPPG 127
           G+ + +L++IA +  L+FG KKL  +G  +G  VK F++A  E ES    + D++ +P  
Sbjct: 3   GISIWQLLIIAVIVVLLFGTKKLRGIGSDLGSAVKGFKKAMSEEESAKANKKDADFEPKN 62

Query: 128 ---EKPTAISEERKDE 140
               K  A +E++KD+
Sbjct: 63  LEQAKTEAAAEKKKDK 78

Length = 81

>gnl|CDD|235091 PRK02958, tatA, twin arginine translocase protein A; Provisional

 Score = 42.3 bits (100), Expect = 3e-06
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 74  LVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETD 124
           L+V+  +  LVFG KKL  +G  +G  VK F+   KE E+  + +     D
Sbjct: 10  LIVLV-IVVLVFGTKKLRNIGSDLGGAVKGFKDGMKEGETPQEAQAQQLPD 59

Length = 73

>gnl|CDD|235219 PRK04098, PRK04098, sec-independent translocase; Provisional

 Score = 42.8 bits (101), Expect = 9e-06
 Identities = 20/53 (37%), Positives = 31/53 (58%)

Query: 66  LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE 118
           +FG+G  E++VI  VA +  GP KLP+    I K  K+ ++   + +S L KE
Sbjct: 1   MFGMGFFEILVILVVAIIFLGPDKLPQAMVDIAKFFKAVKKTINDAKSTLDKE 53

Length = 158

>gnl|CDD|234764 PRK00442, tatA, twin arginine translocase protein A; Provisional

 Score = 40.2 bits (94), Expect = 3e-05
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)

Query: 75  VVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKK-EPDSETDPPGEKPTA 132
           +VI  V  LVFG KKL  +G  +G+++K F++A  E E E K  E  +    P      
Sbjct: 10  IVILVVVVLVFGTKKLKNLGSDVGESIKGFRKAMNEDEKEDKPAEQPAPPAQPVPPVQN 68

Length = 92

>gnl|CDD|234683 PRK00191, tatA, twin arginine translocase protein A; Provisional

 Score = 39.6 bits (92), Expect = 4e-05
 Identities = 17/59 (28%), Positives = 32/59 (54%)

Query: 69  LGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDPPG 127
           LG  E+ +I  +  ++FG KKLP+  +SIG++++ F+   KE   + +     +  P  
Sbjct: 3   LGPWEIGIIVLLIIVLFGAKKLPDAARSIGRSMRIFKSEVKEMSKDDQTPEQQQQQPQQ 61

Length = 84

>gnl|CDD|167284 PRK01833, tatA, twin arginine translocase protein A; Provisional

 Score = 38.7 bits (90), Expect = 7e-05
 Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 5/73 (6%)

Query: 68  GLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDPPG 127
           G+ + +L++I  +  L+FG KKL  +G  +G++VK F++A  +      K  D+E +   
Sbjct: 3   GISIWQLLIIVAIIVLLFGTKKLRTLGTDLGESVKGFKKAMAD-----DKPKDAEFEKVE 57

Query: 128 EKPTAISEERKDE 140
            K  A +E++  E
Sbjct: 58  AKEAASTEQKAKE 70

Length = 74

>gnl|CDD|179592 PRK03554, tatA, twin arginine translocase protein A; Provisional

 Score = 38.5 bits (89), Expect = 1e-04
 Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 10/90 (11%)

Query: 68  GLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKK-EPDSE---- 122
           G+ + +L++IA +  L+FG KKL  +G  +G ++K F++A  + E +  K   D++    
Sbjct: 3   GISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDEPKQDKTSQDADFTAK 62

Query: 123 --TDPPGEKPTAISEERKDEGKISSSKESV 150
              D   +  T   + + ++ K    KE V
Sbjct: 63  TIADKQAD--TNQEQAKTEDAK-RHDKEQV 89

Length = 89

>gnl|CDD|179612 PRK03625, tatE, twin arginine translocase protein E; Validated

 Score = 37.4 bits (87), Expect = 2e-04
 Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 2/62 (3%)

Query: 68  GLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDPPG 127
            + + +L+V+A +  L+FG KKL  +G  +G  +K F++A  + ++  KK   ++ D   
Sbjct: 3   EISITKLLVVAALVVLLFGTKKLRTLGGDLGAAIKGFKKAMNDDDAAAKK--GADVDLQA 60

Query: 128 EK 129
           EK
Sbjct: 61  EK 62

Length = 67

>gnl|CDD|234818 PRK00708, PRK00708, sec-independent translocase; Provisional

 Score = 37.9 bits (88), Expect = 6e-04
 Identities = 19/49 (38%), Positives = 29/49 (59%)

Query: 66  LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESE 114
           +F +G  EL+VIA V  +V GPK LP + ++ GK     ++ A EF  +
Sbjct: 1   MFDIGWSELLVIAIVLIVVVGPKDLPPMLRAFGKMTARMRKMAGEFRRQ 49

Length = 209

>gnl|CDD|135173 PRK04654, PRK04654, sec-independent translocase; Provisional

 Score = 36.7 bits (84), Expect = 0.002
 Identities = 20/57 (35%), Positives = 35/57 (61%)

Query: 66  LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSE 122
           +F +GV EL +IA VA +V GP++LP+  +  G  V+  +      + EL++E ++E
Sbjct: 1   MFDIGVGELTLIAVVALVVLGPERLPKAARFAGLWVRRARMQWDSVKQELERELEAE 57

Length = 214

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	150
PRK14857	90	tatA twin arginine translocase protein A; Provisio	99.83
COG1826	94	TatA Sec-independent protein secretion pathway com	99.78
PRK14860	64	tatA twin arginine translocase protein A; Provisio	99.77
PRK14859	63	tatA twin arginine translocase protein A; Provisio	99.77
PRK14861	61	tatA twin arginine translocase protein A; Provisio	99.77
PRK14858	108	tatA twin arginine translocase protein A; Provisio	99.76
PRK00575	92	tatA twin arginine translocase protein A; Provisio	99.76
PRK01614	85	tatE twin arginine translocase protein A; Validate	99.76
PRK03554	89	tatA twin arginine translocase protein A; Provisio	99.75
PRK01833	74	tatA twin arginine translocase protein A; Provisio	99.75
PRK03625	67	tatE twin arginine translocase protein E; Validate	99.75
PRK04598	81	tatA twin arginine translocase protein A; Provisio	99.75
PRK02958	73	tatA twin arginine translocase protein A; Provisio	99.75
PF02416	53	MttA_Hcf106: mttA/Hcf106 family; InterPro: IPR0033	99.74
PRK00404	141	tatB sec-independent translocase; Provisional	99.74
PRK01770	171	sec-independent translocase; Provisional	99.73
PRK00708	209	sec-independent translocase; Provisional	99.73
PRK04098	158	sec-independent translocase; Provisional	99.73
PRK00442	92	tatA twin arginine translocase protein A; Provisio	99.73
TIGR01410	80	tatB twin arginine-targeting protein translocase T	99.73
TIGR01411	47	tatAE twin arginine-targeting protein translocase,	99.71
PRK04561	75	tatA twin arginine translocase protein A; Provisio	99.71
PRK01371	137	sec-independent translocase; Provisional	99.71
PRK04654	214	sec-independent translocase; Provisional	99.71
PRK01919	169	tatB sec-independent translocase; Provisional	99.7
PRK00191	84	tatA twin arginine translocase protein A; Provisio	99.7
PRK00720	78	tatA twin arginine translocase protein A; Provisio	99.7
PRK03100	136	sec-independent translocase; Provisional	99.69
PRK01470	51	tatA twin arginine translocase protein A; Provisio	99.68
PRK00182	160	tatB sec-independent translocase; Provisional	99.66

>PRK14857 tatA twin arginine translocase protein A; Provisional

Probab=99.83  E-value=1.2e-20  Score=137.41  Aligned_cols=62  Identities=55%  Similarity=0.967  Sum_probs=57.3

Q ss_pred             ecccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCC
Q 031919           64 YALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDP  125 (150)
Q Consensus        64 ~~MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~elk~e~~e~~~~  125 (150)
                      +.||||||+||+||++|+||||||+|||+++|.+|+++|+||+++++++++++++.+.....
T Consensus         1 m~mF~iG~~ElliIlvVaLlvfGP~KLP~lar~lGk~i~~fkk~~~~~~~e~~~~~~~~~~~   62 (90)
T PRK14857          1 MNIFGIGLPEMAVILVIALLVFGPKKLPEIGRSLGKTLKGFQEASKEFENEIKREMAEPEQE   62 (90)
T ss_pred             CCcccccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            46999999999999999999999999999999999999999999999999999887665544

>COG1826 TatA Sec-independent protein secretion pathway components [Intracellular trafficking and secretion]

Probab=99.78  E-value=1.8e-19  Score=130.82  Aligned_cols=54  Identities=50%  Similarity=0.925  Sum_probs=51.2

Q ss_pred             ccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhCC
Q 031919           66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEP  119 (150)
Q Consensus        66 MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~elk~e~  119 (150)
                      ||++|||||+||++|++|||||+|||+++|++|+++|+||++++++++++..+.
T Consensus         1 M~~ig~~elliIlvV~lllfGpkKLP~l~r~~G~~i~~fKk~~~~~~~e~~~~~   54 (94)
T COG1826           1 MFGIGWSELLIILVVALLVFGPKKLPEAGRDLGKAIREFKKAASDVKNELDEEL   54 (94)
T ss_pred             CCCCCHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence            888999999999999999999999999999999999999999999998886555

>PRK14860 tatA twin arginine translocase protein A; Provisional

Probab=99.77  E-value=4e-19  Score=122.44  Aligned_cols=46  Identities=46%  Similarity=0.979  Sum_probs=44.5

Q ss_pred             ccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHH
Q 031919           66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEF  111 (150)
Q Consensus        66 MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~  111 (150)
                      |||+|||||++|++|+||||||+|||+++|++|+++|+||+++++.
T Consensus         1 MfgiG~~ElliI~vIalllfGp~kLP~l~r~lGk~ir~fkk~~~~~   46 (64)
T PRK14860          1 MFGFGMPELIVILVIALVVFGPAKLPQLGQALGGAIRNFKKASNEE   46 (64)
T ss_pred             CCCccHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHcccc
Confidence            8999999999999999999999999999999999999999998873

>PRK14859 tatA twin arginine translocase protein A; Provisional

Probab=99.77  E-value=3.8e-19  Score=122.19  Aligned_cols=47  Identities=49%  Similarity=0.959  Sum_probs=44.8

Q ss_pred             ccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 031919           66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE  112 (150)
Q Consensus        66 MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~  112 (150)
                      |||+|++||++|++|+||||||+|||+++|++|+++|+||+++++.+
T Consensus         1 MfgiG~~ElliIlvv~LlvfGp~kLP~l~r~lGk~i~~frk~~~~~~   47 (63)
T PRK14859          1 MFGIGMPELIVILVIVLIVFGAGKLPEIGGGLGKSIKNFKKATSEKE   47 (63)
T ss_pred             CCCccHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHhcccc
Confidence            89999999999999999999999999999999999999999988743

>PRK14861 tatA twin arginine translocase protein A; Provisional

Probab=99.77  E-value=6.7e-19  Score=120.17  Aligned_cols=55  Identities=44%  Similarity=0.804  Sum_probs=51.0

Q ss_pred             ccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhCCC
Q 031919           66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPD  120 (150)
Q Consensus        66 MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~elk~e~~  120 (150)
                      |+|+||+||++|++|+++||||+|||+++|++|+++|+||++.++++++..++.+
T Consensus         2 ~~~ig~~ElliI~vi~llvfGp~kLP~l~r~~G~~~~~fk~~~~~~~~~~~~~~~   56 (61)
T PRK14861          2 FSNIGFPGLILILVVALIIFGPKKLPELGKALGKTLREFKKATKELTDDDFQEKK   56 (61)
T ss_pred             CCcCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhh
Confidence            5689999999999999999999999999999999999999999999988875544

>PRK14858 tatA twin arginine translocase protein A; Provisional

Probab=99.76  E-value=4.7e-19  Score=132.92  Aligned_cols=56  Identities=38%  Similarity=0.884  Sum_probs=52.8

Q ss_pred             ccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhCCCC
Q 031919           66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDS  121 (150)
Q Consensus        66 MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~elk~e~~e  121 (150)
                      ||||||+||+||++|+||||||+|||+++|.+|+++++||+++++++++++++.+.
T Consensus         1 MF~iG~~ElliIlvVallvfGPkKLPelar~lGk~i~~fk~~~~d~k~~i~~E~~~   56 (108)
T PRK14858          1 MFGIGMPELIVILVIALIVIGPQKLPDLARSLGRGLAEFKKATDDFKQSMQEESRT   56 (108)
T ss_pred             CCCccHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999888776654

>PRK00575 tatA twin arginine translocase protein A; Provisional

Probab=99.76  E-value=1.5e-18  Score=127.06  Aligned_cols=57  Identities=33%  Similarity=0.556  Sum_probs=53.4

Q ss_pred             ccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCC
Q 031919           66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSE  122 (150)
Q Consensus        66 MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~elk~e~~e~  122 (150)
                      |||||+|||+||++|+||||||+|||+++|++|+++|+||++.+++++|.+++.+..
T Consensus         1 m~~iG~~ElliIlvi~LllFGpkKLPel~r~lGk~ir~fK~a~~~~~~e~~~~~~~~   57 (92)
T PRK00575          1 MGSLSPWHWAILAVVVILLFGAKKLPDAARSLGKSLRIFKSEVKEMQSDNKAEASAA   57 (92)
T ss_pred             CCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhhhhccccccccc
Confidence            899999999999999999999999999999999999999999999998888766554

>PRK01614 tatE twin arginine translocase protein A; Validated

Probab=99.76  E-value=6.6e-19  Score=127.00  Aligned_cols=82  Identities=22%  Similarity=0.381  Sum_probs=62.3

Q ss_pred             ccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCCCccccccccccCcccc
Q 031919           66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDPPGEKPTAISEERKDEGKISS  145 (150)
Q Consensus        66 MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~elk~e~~e~~~~~~e~~~~~~e~~k~~~~~S~  145 (150)
                      |||+|+|||+||++|+||+|||+|||+++|++|+++|+||+++++.+++-++...+.. ..+++....+.+...|.+...
T Consensus         1 M~GlG~~ELLIIlvIvLLLFG~kKLPeLgr~LGkaIkeFKka~~e~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   79 (85)
T PRK01614          1 MEGLSITKLLVVGILIVLLFGTSKLRTLGADLGAALKGFKKAMRNDDEVSTSVLGETK-MSAETKTVAETKAASDSQAAA   79 (85)
T ss_pred             CCCccHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhhccccccccccccccc-cchhhhhhhhhhccccccccc
Confidence            8999999999999999999999999999999999999999998885444444333322 223555555555556666655


Q ss_pred             ccC
Q 031919          146 SKE  148 (150)
Q Consensus       146 S~e  148 (150)
                      |.|
T Consensus        80 ~~~   82 (85)
T PRK01614         80 SVE   82 (85)
T ss_pred             ccc
Confidence            554

>PRK03554 tatA twin arginine translocase protein A; Provisional

Probab=99.75  E-value=7.6e-19  Score=127.79  Aligned_cols=48  Identities=33%  Similarity=0.643  Sum_probs=45.5

Q ss_pred             ccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 031919           66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFES  113 (150)
Q Consensus        66 MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~  113 (150)
                      |+|+|+|||+||++|+||||||+|||+++|+||+++|+||+++++.+.
T Consensus         1 M~glG~~eLlIIlvIvLLlFG~kKLPelgr~LGkaireFKka~~e~~~   48 (89)
T PRK03554          1 MGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDEP   48 (89)
T ss_pred             CCCccHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhhccccc
Confidence            889999999999999999999999999999999999999999887653

>PRK01833 tatA twin arginine translocase protein A; Provisional

Probab=99.75  E-value=1.1e-18  Score=123.33  Aligned_cols=47  Identities=32%  Similarity=0.644  Sum_probs=45.4

Q ss_pred             ccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 031919           66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE  112 (150)
Q Consensus        66 MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~  112 (150)
                      |+|+|+|||+||++|+||+|||+|||+++|++|+++|+||+++++.+
T Consensus         1 m~g~g~~elliIl~i~lllFG~kKLP~l~~~lGk~ik~Fkk~~~~~~   47 (74)
T PRK01833          1 MGGISIWQLLIIVAIIVLLFGTKKLRTLGTDLGESVKGFKKAMADDK   47 (74)
T ss_pred             CCCccHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhcccc
Confidence            89999999999999999999999999999999999999999998865

>PRK03625 tatE twin arginine translocase protein E; Validated

Probab=99.75  E-value=1.1e-18  Score=121.12  Aligned_cols=49  Identities=29%  Similarity=0.607  Sum_probs=46.0

Q ss_pred             ccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 031919           66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESE  114 (150)
Q Consensus        66 MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~e  114 (150)
                      |||+|||||+||++|+||||||+|||+++|++|+++|+||+++++.+++
T Consensus         1 M~~ig~~elliIlvI~lllFGpkKLp~lg~~lGk~i~~Fk~~~~~~~~~   49 (67)
T PRK03625          1 MGEISITKLLVVAALVVLLFGTKKLRTLGGDLGAAIKGFKKAMNDDDAA   49 (67)
T ss_pred             CCCCcHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            8999999999999999999999999999999999999999988876544

>PRK04598 tatA twin arginine translocase protein A; Provisional

Probab=99.75  E-value=1.8e-18  Score=124.09  Aligned_cols=48  Identities=40%  Similarity=0.663  Sum_probs=45.6

Q ss_pred             ccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 031919           66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFES  113 (150)
Q Consensus        66 MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~  113 (150)
                      |+|+|+|||+||++|+||+|||+|||+++|+||+++|+||+++++.++
T Consensus         1 m~glg~~elliIlvivlllFG~kKLPelg~~lGk~i~~FKk~~~~~~~   48 (81)
T PRK04598          1 MGGISIWQLLIIAVIVVLLFGTKKLRGIGSDLGSAVKGFKKAMSEEES   48 (81)
T ss_pred             CCCccHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhhccccc
Confidence            889999999999999999999999999999999999999999988653

>PRK02958 tatA twin arginine translocase protein A; Provisional

Probab=99.75  E-value=1.9e-18  Score=121.82  Aligned_cols=50  Identities=30%  Similarity=0.511  Sum_probs=46.3

Q ss_pred             ccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHh
Q 031919           66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESEL  115 (150)
Q Consensus        66 MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~el  115 (150)
                      |+++|+|||+||++|+||||||+|||+++|++|+++|+||+++++.+++-
T Consensus         1 mg~~g~~elliIl~IvlllFG~kKLPelgr~lGkair~FK~~~~~~~~~~   50 (73)
T PRK02958          1 MGSFSIWHWLIVLVIVVLVFGTKKLRNIGSDLGGAVKGFKDGMKEGETPQ   50 (73)
T ss_pred             CCCccHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhccccccc
Confidence            78999999999999999999999999999999999999999998865433

>PF02416 MttA_Hcf106: mttA/Hcf106 family; InterPro: IPR003369 Members of this protein family are involved in a sec-independent translocation mechanism

Probab=99.74  E-value=4.4e-18  Score=112.78  Aligned_cols=51  Identities=49%  Similarity=0.905  Sum_probs=42.3

Q ss_pred             CChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhCC
Q 031919           69 LGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEP  119 (150)
Q Consensus        69 iG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~elk~e~  119 (150)
                      ||++||++|++|+++||||+|||+++|++|+++|+||++.++.+++.+++.
T Consensus         1 ig~~El~iI~vvalllfGp~kLP~~~r~lG~~ir~fk~~~~~~~~~~~~~~   51 (53)
T PF02416_consen    1 IGFPELLIILVVALLLFGPKKLPELARSLGKAIREFKKAINEAKEEIEKEA   51 (53)
T ss_dssp             S-HHHHHHHHHHHHHHS-TTTHHHHHHHHHHHHHHHHHHHHHHHH------
T ss_pred             CCHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Confidence            699999999999999999999999999999999999999999999866554

This pathway has been called the DeltapH pathway in chloroplasts []. Members of this family in Escherichia coli are involved in export of redox proteins with a "twin arginine" leader motif (S/T-R-R-X-F-L-K) []. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports proteins with bound cofactors that require folding prior to export.; GO: 0008565 protein transporter activity, 0015031 protein transport; PDB: 2L16_A.

>PRK00404 tatB sec-independent translocase; Provisional

Probab=99.74  E-value=3.4e-18  Score=133.41  Aligned_cols=55  Identities=27%  Similarity=0.592  Sum_probs=51.5

Q ss_pred             ccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhCCC
Q 031919           66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPD  120 (150)
Q Consensus        66 MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~elk~e~~  120 (150)
                      ||||||+||+||++|+||||||+|||+++|.+|+|+++||+++++.++|+.++.+
T Consensus         1 MF~IG~~ELlvI~VVaLlV~GPkkLP~laR~lG~~i~~~rr~~~~~k~ei~~E~~   55 (141)
T PRK00404          1 MFGISFSELLLVGLVALLVLGPERLPGAARTAGLWIGRLKRSFNAIKQEVEREIG   55 (141)
T ss_pred             CCCccHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            9999999999999999999999999999999999999999999988877777654

>PRK01770 sec-independent translocase; Provisional

Probab=99.73  E-value=3.2e-18  Score=137.11  Aligned_cols=54  Identities=26%  Similarity=0.567  Sum_probs=51.3

Q ss_pred             ccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhCC
Q 031919           66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEP  119 (150)
Q Consensus        66 MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~elk~e~  119 (150)
                      |||||||||+||+||+||||||+|||+++|.+|+|+|+||++++++++++.++.
T Consensus         1 MF~IG~~ELllI~vVaLlV~GPerLP~~~r~lg~~i~~~R~~~~~~k~e~~~E~   54 (171)
T PRK01770          1 MFDIGFSELLLVFVIGLVVLGPQRLPVAVKTVAGWIRALRSLATTVQNELTQEL   54 (171)
T ss_pred             CCCccHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999888777765

>PRK00708 sec-independent translocase; Provisional

Probab=99.73  E-value=3.1e-18  Score=140.77  Aligned_cols=57  Identities=33%  Similarity=0.568  Sum_probs=54.0

Q ss_pred             ccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCC
Q 031919           66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSE  122 (150)
Q Consensus        66 MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~elk~e~~e~  122 (150)
                      |||||||||+||+||+||||||+|||+++|.+|+++++||++.++++++++++.++.
T Consensus         1 MFdIG~~ELlvI~vVaLvV~GPkrLP~~~R~lGk~v~k~R~~a~e~r~~~~e~~~~~   57 (209)
T PRK00708          1 MFDIGWSELLVIAIVLIVVVGPKDLPPMLRAFGKMTARMRKMAGEFRRQFDEALREA   57 (209)
T ss_pred             CCCccHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            999999999999999999999999999999999999999999999999998876643

>PRK04098 sec-independent translocase; Provisional

Probab=99.73  E-value=3.9e-18  Score=135.14  Aligned_cols=56  Identities=36%  Similarity=0.573  Sum_probs=53.2

Q ss_pred             ccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhCCCC
Q 031919           66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDS  121 (150)
Q Consensus        66 MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~elk~e~~e  121 (150)
                      |||||||||+||++||||||||+|||+++|.+|+++|+||+++++++++++++.+.
T Consensus         1 MfgiG~~EllvI~vVaLlvfGP~KLP~~~r~lGk~ir~~K~~~~~~k~~l~~Ei~~   56 (158)
T PRK04098          1 MFGMGFFEILVILVVAIIFLGPDKLPQAMVDIAKFFKAVKKTINDAKSTLDKEINI   56 (158)
T ss_pred             CCCCcHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            89999999999999999999999999999999999999999999999888887743

>PRK00442 tatA twin arginine translocase protein A; Provisional

Probab=99.73  E-value=7.7e-18  Score=123.29  Aligned_cols=56  Identities=34%  Similarity=0.474  Sum_probs=50.7

Q ss_pred             ccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhCCCC
Q 031919           66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDS  121 (150)
Q Consensus        66 MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~elk~e~~e  121 (150)
                      |+++|||||+||++|+||||||+|||+++|++|+++|+||+++++.+++.......
T Consensus         1 Mg~~g~~elliIlvIvlllFG~~KLPelg~~lGk~ik~FKka~~e~~~~~~~~~~~   56 (92)
T PRK00442          1 MGIFDWKHWIVILVVVVLVFGTKKLKNLGSDVGESIKGFRKAMNEDEKEDKPAEQP   56 (92)
T ss_pred             CCCccHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhccccccccccccC
Confidence            78999999999999999999999999999999999999999999977666555444

>TIGR01410 tatB twin arginine-targeting protein translocase TatB

Probab=99.73  E-value=4e-18  Score=121.35  Aligned_cols=55  Identities=36%  Similarity=0.657  Sum_probs=52.8

Q ss_pred             cCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhCCCC
Q 031919           67 FGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDS  121 (150)
Q Consensus        67 FgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~elk~e~~e  121 (150)
                      |||||+|+++|++|+++||||+|||+++|.+|+++++||+++++++++++++.+.
T Consensus         1 f~ig~~EllvI~vvallv~GP~kLP~~~r~~G~~i~~~r~~~~~~~~~~~~e~~~   55 (80)
T TIGR01410         1 FDIGFSELLLIAVVALVVLGPERLPVAIRAVGKFVRRLRGMASDVKNELDEELKA   55 (80)
T ss_pred             CCCcHHHHHHHHHHHHheECchHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHhch
Confidence            7999999999999999999999999999999999999999999999999888763

This model represents the TatB protein of a Sec-independent system for transporting folded proteins, often with a bound redox cofactor, across the bacterial inner membrane. TatC is the multiple membrane spanning component. TatB, like the related TatA/E proteins, appears to span the membrane one time. The tat system recognizes proteins with an elongated signal sequence containing a conserved R-R in a motif approximated by RRxFLK N-terminal to the transmembrane helix. TIGRFAMs model TIGR01409 describes this twin-Arg signal sequence. A similar system, termed Delta-pH-dependent transport, operates on chloroplast-encoded proteins.

>TIGR01411 tatAE twin arginine-targeting protein translocase, TatA/E family

Probab=99.71  E-value=6.9e-18  Score=109.71  Aligned_cols=46  Identities=52%  Similarity=0.855  Sum_probs=43.7

Q ss_pred             CCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 031919           68 GLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFES  113 (150)
Q Consensus        68 giG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~  113 (150)
                      |+|+||+++|++|++++|||+|||+++|++|+++|+||+++++.++
T Consensus         1 gig~~ElliI~vi~llvfGp~kLP~~~r~lG~~i~~fk~~~~~~~~   46 (47)
T TIGR01411         1 GLSPPEWLIILVVILLLFGAKKLPELGRDLGKAIKEFKKALKEEES   46 (47)
T ss_pred             CCCHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHHHHHHHhhcccc
Confidence            6899999999999999999999999999999999999999988654

This model distinguishes TatA/E from the related TatB, but does not distinguish TatA from TatE. The Tat (twin-arginine translocation) system is a Sec-independent exporter for folded proteins, often with a redox cofactor already bound, across the bacterial inner membrane. Functionally equivalent systems are found in the chloroplast and some in archaeal species. The signal peptide recognized by the Tat system is modeled by TIGR01409.

>PRK04561 tatA twin arginine translocase protein A; Provisional

Probab=99.71  E-value=7.4e-18  Score=119.30  Aligned_cols=50  Identities=24%  Similarity=0.420  Sum_probs=46.0

Q ss_pred             ccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHh
Q 031919           66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESEL  115 (150)
Q Consensus        66 MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~el  115 (150)
                      |+++|+|||+||++|+||+|||+|||+++|++|++++.||+++++.+.+.
T Consensus         1 Mgg~s~~ellIIlvIvlLlFG~~KLPel~r~lGk~ik~FKk~~~e~~~~~   50 (75)
T PRK04561          1 MGSFSIWHWLVVLVIVLLVFGTKRLTSGAKDLGSAVKEFKKGMHDDDKPA   50 (75)
T ss_pred             CCCCcHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHhccccccc
Confidence            88999999999999999999999999999999999999999888754433

>PRK01371 sec-independent translocase; Provisional

Probab=99.71  E-value=1e-17  Score=130.18  Aligned_cols=57  Identities=39%  Similarity=0.747  Sum_probs=54.0

Q ss_pred             ccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCC
Q 031919           66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSE  122 (150)
Q Consensus        66 MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~elk~e~~e~  122 (150)
                      ||||||+||++|++|+||||||+|||+++|++|+++|+||+++++++++++++....
T Consensus         1 MfgIG~~EllvIlvVallvfGPeKLP~~ar~lg~~ir~~R~~~~~ak~~i~~Elg~e   57 (137)
T PRK01371          1 MFGIGPGELVVLVVLAVLVFGPDKLPKAARDAGRTLRQLREMANNARNDLRSELGPE   57 (137)
T ss_pred             CCCccHHHHHHHHHHHhheeCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence            899999999999999999999999999999999999999999999999998887543

>PRK04654 sec-independent translocase; Provisional

Probab=99.71  E-value=1.3e-17  Score=137.41  Aligned_cols=56  Identities=34%  Similarity=0.573  Sum_probs=53.0

Q ss_pred             ccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhCCCC
Q 031919           66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDS  121 (150)
Q Consensus        66 MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~elk~e~~e  121 (150)
                      ||||||+||+||+||+||||||+|||+++|.+|+|+|+||+.++++++|+.++.+.
T Consensus         1 MFgIG~~ELLlI~VVALlV~GPerLPe~aRtlGk~irk~R~~~~~vk~El~~El~~   56 (214)
T PRK04654          1 MFDIGVGELTLIAVVALVVLGPERLPKAARFAGLWVRRARMQWDSVKQELERELEA   56 (214)
T ss_pred             CCCccHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence            99999999999999999999999999999999999999999999999888877643

>PRK01919 tatB sec-independent translocase; Provisional

Probab=99.70  E-value=1.6e-17  Score=132.88  Aligned_cols=56  Identities=29%  Similarity=0.545  Sum_probs=53.8

Q ss_pred             ccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhCCCC
Q 031919           66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDS  121 (150)
Q Consensus        66 MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~elk~e~~e  121 (150)
                      ||||||+||+||+|||||||||+|||+++|.+|+++++||++++++++|++++.+.
T Consensus         1 MFdIG~~ElliI~VVALiV~GPekLP~~aRtlGk~i~k~Rr~~~d~K~ev~~E~e~   56 (169)
T PRK01919          1 MIDLGLSKLALIGVVALVVIGPERLPRVARTAGALFGRAQRYINDVKAEVSREIEL   56 (169)
T ss_pred             CCCCcHHHHHHHHHHHHheeCchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence            89999999999999999999999999999999999999999999999999988743

>PRK00191 tatA twin arginine translocase protein A; Provisional

Probab=99.70  E-value=1.9e-17  Score=119.45  Aligned_cols=53  Identities=30%  Similarity=0.565  Sum_probs=48.3

Q ss_pred             cCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhCC
Q 031919           67 FGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEP  119 (150)
Q Consensus        67 FgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~elk~e~  119 (150)
                      +|+|+|||+||++|+||||||+|||+++|++|+++|+||+++++.+++..++.
T Consensus         1 m~ig~~ElliI~vI~lllFGp~KLP~~~r~lGk~ir~FK~~~~~~~~d~~~~e   53 (84)
T PRK00191          1 MSLGPWEIGIIVLLIIVLFGAKKLPDAARSIGRSMRIFKSEVKEMSKDDQTPE   53 (84)
T ss_pred             CCCcHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhcccccccchh
Confidence            58999999999999999999999999999999999999999999876655443

>PRK00720 tatA twin arginine translocase protein A; Provisional

Probab=99.70  E-value=3.3e-17  Score=116.79  Aligned_cols=48  Identities=21%  Similarity=0.407  Sum_probs=45.3

Q ss_pred             ccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 031919           66 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFES  113 (150)
Q Consensus        66 MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~  113 (150)
                      |+|+|+|||+||++|+||+|||+|||++++++|+++++||+++++.+.
T Consensus         1 Mgg~g~~ellIIlvIvlllFG~kKLP~l~~~lGk~ik~FKk~~~~~~~   48 (78)
T PRK00720          1 MGSFSIWHWLIVLAVVLLLFGRGKISELMGDVAKGIKSFKKGMADDDA   48 (78)
T ss_pred             CCCCcHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhhccccc
Confidence            889999999999999999999999999999999999999998887543

>PRK03100 sec-independent translocase; Provisional

Probab=99.69  E-value=2.5e-17  Score=127.78  Aligned_cols=55  Identities=22%  Similarity=0.456  Sum_probs=51.7

Q ss_pred             cc-CCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhCCC
Q 031919           66 LF-GLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPD  120 (150)
Q Consensus        66 MF-giG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~elk~e~~  120 (150)
                      || +|||+||+||+||+||||||+|||+++|++|+++|+||+++++++++++++..
T Consensus         1 Mf~~iG~~EllvI~vVaLvv~GPkrLP~~~r~lG~~vr~~R~~~~~~~~~~~~elg   56 (136)
T PRK03100          1 MFANIGWGEMLVLVVAGLVILGPERLPGAIRWTARALRQARDYASGATSQLREELG   56 (136)
T ss_pred             CcccccHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            78 59999999999999999999999999999999999999999999988887664

>PRK01470 tatA twin arginine translocase protein A; Provisional

Probab=99.68  E-value=2.7e-17  Score=108.89  Aligned_cols=46  Identities=26%  Similarity=0.533  Sum_probs=43.1

Q ss_pred             cCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 031919           67 FGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE  112 (150)
Q Consensus        67 FgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~  112 (150)
                      +|+|+|||++|++|++++|||+|||+++|++|+++|+||+++++.+
T Consensus         1 mgig~~elliI~vi~llvFGp~KLP~l~r~lG~~i~~Fk~~~~~~~   46 (51)
T PRK01470          1 MGMSFSHLLIVLLIIFVLFGAGKLPQVMSDLAKGLKAFKDGMKDDG   46 (51)
T ss_pred             CCCCHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHHHHHHHhcccc
Confidence            5899999999999999999999999999999999999999887743

>PRK00182 tatB sec-independent translocase; Provisional

Probab=99.66  E-value=9.1e-17  Score=127.61  Aligned_cols=55  Identities=20%  Similarity=0.421  Sum_probs=51.3

Q ss_pred             cc-CCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhCCC
Q 031919           66 LF-GLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPD  120 (150)
Q Consensus        66 MF-giG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~elk~e~~  120 (150)
                      || +|||+||+||+||+||||||+|||+++|.+|+++|+||+++++++++++.+..
T Consensus         1 MF~~IG~~EllvIlvIaLlVfGPerLP~~~r~lg~~ir~~R~~~~~~k~el~~Elg   56 (160)
T PRK00182          1 MFSSVGWGEILLLLIVGLIVIGPERLPRLIEDVRAALLAARTAINNAKQQLDGDFG   56 (160)
T ss_pred             CcccccHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            78 59999999999999999999999999999999999999999998888777764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	150
2l16_A	78	Solution Structure Of Bacillus Subtilits Tatad Prot		1e-06

>pdb|2L16|A Chain A, Solution Structure Of Bacillus Subtilits Tatad Protein In Dpc Micelles Length = 78

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 69  LGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDS 121
           +G+P L++I  +A ++FGP KLPE+G++ G+T+  F+ A K   S  +KE  S
Sbjct: 5   IGIPGLILIFVIALIIFGPSKLPEIGRAAGRTLLEFKSATKSLVSGDEKEEKS 57

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	150
2l16_A	78	SEC-independent protein translocase protein tatad;	2e-20
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	3e-04

>2l16_A SEC-independent protein translocase protein tatad; membrane protein, protein transport; NMR {Bacillus subtilis} Length = 78

 Score = 78.8 bits (194), Expect = 2e-20
 Identities = 23/75 (30%), Positives = 39/75 (52%)

Query: 66  LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDP 125
              +G+P L++I  +A ++FGP KLPE+G++ G+T+  F+ A K   S  +KE  S    
Sbjct: 2   FSNIGIPGLILIFVIALIIFGPSKLPEIGRAAGRTLLEFKSATKSLVSGDEKEEKSAELT 61

Query: 126 PGEKPTAISEERKDE 140
             ++      E    
Sbjct: 62  AVKQDKNAGLEHHHH 76

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 37.6 bits (86), Expect = 3e-04
 Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 9/32 (28%)

Query: 105 QQAAKEFESELKK-EPDSETDPPGEKPT-AIS 134
           +QA K+ ++ LK    DS        P  AI 
Sbjct: 19  KQALKKLQASLKLYADDS-------APALAIK 43

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	150
2l16_A	78	SEC-independent protein translocase protein tatad;	99.81

>2l16_A SEC-independent protein translocase protein tatad; membrane protein, protein transport; NMR {Bacillus subtilis}

Probab=99.81  E-value=1.7e-20  Score=132.27  Aligned_cols=56  Identities=38%  Similarity=0.717  Sum_probs=49.8

Q ss_pred             cccCCChHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhCCC
Q 031919           65 ALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPD  120 (150)
Q Consensus        65 ~MFgiG~~ELiIIlvVaLLVfGPkKLP~laR~LGk~ir~fkk~~~e~~~elk~e~~  120 (150)
                      +|||||+|||+||++|+||||||+|||+++|++|+++|+||+++++++++.+++.+
T Consensus         1 MMf~ig~~ElliIlvVaLlvfGpkkLP~l~r~lGk~ir~fK~~~~~~~~e~~~~~~   56 (78)
T 2l16_A            1 MFSNIGIPGLILIFVIALIIFGPSKLPEIGRAAGRTLLEFKSATKSLVSGDEKEEK   56 (78)
T ss_dssp             CCSSSCHHHHHHHHHHHHHHSCTTTHHHHHHHHHHHHHHHHHHHHHHHHCCC----
T ss_pred             CCCCCCHHHHHHHHHHHhheeCccHhHHHHHHHHHHHHHHHHHHHHhHhhhhHHhh
Confidence            37999999999999999999999999999999999999999999999988765443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00