Citrus Sinensis ID: 031927

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Protein Sequence
MEATSLRSSLVFDSLFSSKSPKRNFGSVRRAGAIVSAAGRDSCHWNYRGQLVDENMIVLRKRIHEMKVMERNYEPPAEWMEWEKQYYACYDEFICKLVGFLQTQLMNSRPSFALGMLAVVAMSVPASTFMVILRLLEVANGVLSAINSSC
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccEHHEEEccccccccccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MEATSLRSSLVFdslfsskspkrnfgsvrraGAIVSaagrdschwnyrgqlvdENMIVLRKRIHEMKVmernyeppaewMEWEKQYYACYDEFICKLVGFLQTqlmnsrpsfALGMLAVVAMSVPASTFMVILRLLEVANGVLSAINSSC
Flexible Loop (DISEMBL)
meatslrsslvfdslfsskspkrnfgsvrRAGAIVsaagrdschwnyrgqlvdenMIVLRKRIHEMKVMERNYEPPAEWMEWEKQYYACYDEFICKLVGFLQTQLMNSRPSFALGMLAVVAMSVPASTFMVILRLLEVANGVLSAINSSC
Low Complexity Region (SEG)
MEATSLRSSLVFDSLFSSKSPKRNFGSVRRAGAIVSAAGRDSCHWNYRGQLVDENMIVLRKRIHEMKVMERNYEPPAEWMEWEKQYYACYDEFICKLVGFLQTQLMNSRPSFALGMLAVVAMSVPASTFMVILRLLEVANGVLSAINSSC
Disordered region (IsUnstruct)
***************************VRRAGAIVSAAGRDSCHWNYRGQLVDENMIVLRKRIHEMKVMERNYEPPAEWMEWEKQYYACYDEFICKLVGFLQTQLMNSRPSFALGMLAVVAMSVPASTFMVILRLLEVANGVLSA*****
Disordered Region (DISOPRED)
*************************************************QLVDENMIVLRKRIHEMKVMERNYEPPAEWMEWEKQYYACYDEFICKLVGFLQTQLMNSRPSFALGMLAVVAMSVPASTFMVILRLLEVANGVLSAINSS*
Disordered Region (DISEMBL)
********SLVFDSLFSSKSPKRNFGSVRRAGAIVSAAGRDSCHWNYRGQLVDENMIVLRKRIHEMKVMERNYEPPAEWMEWEKQYYACYDEFICKLVGFLQTQLMNSRPSFALGMLAVVAMSVPASTFMVILRLLEVANGVLSAINSSC
Disordered Region (DISPRO)
***************************VRRA**IVSAAGRDSCHWNYRGQLVDENMIVLRKRIHEMKVMERNYEPPAEWMEWEKQYYACYDEFICKLVGFLQTQLMNSRPSFALGMLAVVAMSVPASTFMVILRLLEVANGVLSAINS*C
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEATSLRSSLVFDSLFSSKSPKRNFGSVRRAGAIVSAAGRDSCHWNYRGQLVDENMIVLRKRIHEMKVMERNYEPPAEWMEWEKQYYACYDEFICKLVGFLQTQLMNSRPSFALGMLAVVAMSVPASTFMVILRLLEVANGVLSAINSSC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	150
255583771	162	conserved hypothetical protein [Ricinus	0.98	0.907	0.518	2e-37
255571302	159	conserved hypothetical protein [Ricinus	0.826	0.779	0.562	1e-34
225424172	148	PREDICTED: uncharacterized protein LOC10	0.973	0.986	0.503	2e-34
358249084	149	uncharacterized protein LOC100789312 [Gl	0.873	0.879	0.518	3e-34
224101811	150	predicted protein [Populus trichocarpa]	0.893	0.893	0.521	4e-34
388517785	145	unknown [Lotus japonicus]	0.866	0.896	0.5	1e-33
356575634	149	PREDICTED: uncharacterized protein LOC10	0.96	0.966	0.506	2e-33
296087196	144	unnamed protein product [Vitis vinifera]	0.946	0.986	0.496	2e-30
297817716	154	hypothetical protein ARALYDRAFT_904322 [	0.753	0.733	0.530	1e-29
15226225	156	uncharacterized protein [Arabidopsis tha	0.833	0.801	0.488	2e-29

>gi|255583771|ref|XP_002532638.1| conserved hypothetical protein [Ricinus communis] gi|223527629|gb|EEF29741.1| conserved hypothetical protein [Ricinus communis]

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 83/160 (51%), Positives = 105/160 (65%), Gaps = 13/160 (8%)

Query: 1   MEATSLRSSLVFDSLF----SSKSPKRNFGSVRRAGAIVSAA----GRDSCHWN-----Y 47
           ME TSL SS    SL        +    FG +RR+    S A     R+ C+WN     Y
Sbjct: 1   MEPTSLFSSSGLPSLSIPCKQLTTGILKFGHIRRSSHSHSTALHSSRREPCNWNSNDNGY 60

Query: 48  RGQLVDENMIVLRKRIHEMKVMERNYEPPAEWMEWEKQYYACYDEFICKLVGFLQTQLMN 107
              LVDE+MIVLRKRIHEMK++ERNYEPP EWM+WEKQ+YA YD+FICK VG LQ  LM+
Sbjct: 61  GELLVDESMIVLRKRIHEMKMIERNYEPPEEWMDWEKQWYASYDQFICKFVGLLQMHLMS 120

Query: 108 SRPSFALGMLAVVAMSVPASTFMVILRLLEVANGVLSAIN 147
           +RPS ALGM+ ++ MS+P S  M+ L L+E  NGV+S ++
Sbjct: 121 TRPSLALGMIFLITMSLPISAIMIALHLMEAGNGVISTLH 160

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255571302|ref|XP_002526600.1| conserved hypothetical protein [Ricinus communis] gi|223534040|gb|EEF35759.1| conserved hypothetical protein [Ricinus communis]

 Score =  150 bits (379), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 72/128 (56%), Positives = 92/128 (71%), Gaps = 4/128 (3%)

Query: 20  SPKRNFGSVRRAGAIVSAAGRDSCHWNYRGQLVDENMIVLRKRIHEMKVMERNYEPPAEW 79
           S  R F +V R      A G D  + N  G+LVD NMIVLRKRIHEMK++ERNYEPP++W
Sbjct: 33  SRTRVFAAVGRD----QAHGHDQSYNNACGRLVDVNMIVLRKRIHEMKMVERNYEPPSDW 88

Query: 80  MEWEKQYYACYDEFICKLVGFLQTQLMNSRPSFALGMLAVVAMSVPASTFMVILRLLEVA 139
           MEWEKQY+A YD  IC++ G LQ+ LMN+RP FALGM+ ++A+SVP S+ MV+   LE+A
Sbjct: 89  MEWEKQYFASYDSLICEMAGVLQSLLMNTRPGFALGMMGLIALSVPVSSAMVLSHFLEMA 148

Query: 140 NGVLSAIN 147
             V+  IN
Sbjct: 149 KMVMDGIN 156

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424172|ref|XP_002284089.1| PREDICTED: uncharacterized protein LOC100242324 [Vitis vinifera]

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/147 (50%), Positives = 100/147 (68%), Gaps = 1/147 (0%)

Query: 1   MEATSLRSSLVFDSLFSSKSPKRNFGSVRRAGAIVSAAGRDSCHWNYRGQLVDENMIVLR 60
           ME++ L S+ +    FS      + G  R +   VSA  R S H N+ G+LVDEN+IVLR
Sbjct: 1   MESSCLCSTALPLGPFSKFRGGDDCGKKRGSTTRVSAW-RRSDHQNHGGRLVDENLIVLR 59

Query: 61  KRIHEMKVMERNYEPPAEWMEWEKQYYACYDEFICKLVGFLQTQLMNSRPSFALGMLAVV 120
           KRIHEMK++ERNYEPP +WMEWEKQ+Y  YD FIC  +G LQ+QLMN+RPS  LGMLA++
Sbjct: 60  KRIHEMKMVERNYEPPEDWMEWEKQFYTSYDAFICDAMGLLQSQLMNTRPSLVLGMLAMI 119

Query: 121 AMSVPASTFMVILRLLEVANGVLSAIN 147
            +SVP S  +++   +E+   V + I+
Sbjct: 120 TLSVPTSAALILGHFVEITKWVFAGIH 146

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249084|ref|NP_001239990.1| uncharacterized protein LOC100789312 [Glycine max] gi|255640808|gb|ACU20687.1| unknown [Glycine max]

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 69/133 (51%), Positives = 92/133 (69%), Gaps = 2/133 (1%)

Query: 15  LFSSKSPKRNFGSVRRAGAIVSAAG--RDSCHWNYRGQLVDENMIVLRKRIHEMKVMERN 72
           LF   SP +     ++  +     G  R S   N+ G+LVDE MI+LRKRIHEM ++ERN
Sbjct: 13  LFHPFSPSKPCSKGKKTNSFAPIKGSMRGSADQNFSGRLVDEGMIILRKRIHEMNMIERN 72

Query: 73  YEPPAEWMEWEKQYYACYDEFICKLVGFLQTQLMNSRPSFALGMLAVVAMSVPASTFMVI 132
           YEPP++WM+WEK+YY  YD  IC+ VG LQTQLMN+RPS ALG +A+VA+SVP S+ ++ 
Sbjct: 73  YEPPSDWMDWEKRYYTKYDSIICEAVGVLQTQLMNTRPSLALGAMALVAISVPTSSAVLF 132

Query: 133 LRLLEVANGVLSA 145
             L E+A  VL+A
Sbjct: 133 FHLFELAKAVLAA 145

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224101811|ref|XP_002312430.1| predicted protein [Populus trichocarpa] gi|222852250|gb|EEE89797.1| predicted protein [Populus trichocarpa]

 Score =  149 bits (376), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 73/140 (52%), Positives = 99/140 (70%), Gaps = 6/140 (4%)

Query: 12  FDSLFSSKSPKRNFGSVRRAGAIVSAAGRDSCHWNY-RGQLVDENMIVLRKRIHEMKVME 70
           +  LF+S   K    S +R  A +SA+ R+S   NY  G++VDENMIVLRKRIHEMK++E
Sbjct: 13  YHPLFASS--KTKLDSRKRVSARISASRRESHDQNYFSGRIVDENMIVLRKRIHEMKMVE 70

Query: 71  RNYEPPAEWMEWEKQYYACYDEFICKLVGFLQTQLMNSRPSFALGMLAVVAMSVPASTFM 130
           RNYEPPA WMEWEK+Y+  YD  IC+++GFLQ+QLM++RP  ALG +A++++SVP ST M
Sbjct: 71  RNYEPPANWMEWEKRYFTSYDSLICEMMGFLQSQLMDTRPGLALGFIALISLSVPMSTAM 130

Query: 131 VILRLLE---VANGVLSAIN 147
           +     E   +A G L  +N
Sbjct: 131 MFFHFTEMFKMALGGLPGLN 150

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388517785|gb|AFK46954.1| unknown [Lotus japonicus]

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 66/132 (50%), Positives = 101/132 (76%), Gaps = 2/132 (1%)

Query: 16  FSSKSPKRNFGSVRRAGAIVSAAGRDSCHWNYRGQLVDENMIVLRKRIHEMKVMERNYEP 75
           F S  P     + R++  +++++ R++   N+ G+LVDE+MI+LRKRIHEM ++E+NYE 
Sbjct: 14  FLSNKPAAVSSNGRKSSYVMASSRREA--ENFGGRLVDESMIILRKRIHEMSMIEKNYEA 71

Query: 76  PAEWMEWEKQYYACYDEFICKLVGFLQTQLMNSRPSFALGMLAVVAMSVPASTFMVILRL 135
           P++WM+WEK+YY  YD FIC+ +G LQTQLMN+RPS ALG +A++A+SVP S+ +V+  L
Sbjct: 72  PSDWMDWEKRYYTSYDSFICEAMGVLQTQLMNTRPSVALGAIALIALSVPTSSAVVLHHL 131

Query: 136 LEVANGVLSAIN 147
           +E+AN VL+ I+
Sbjct: 132 VELANNVLAGIH 143

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575634|ref|XP_003555943.1| PREDICTED: uncharacterized protein LOC100795681 [Glycine max]

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/146 (50%), Positives = 102/146 (69%), Gaps = 2/146 (1%)

Query: 1   MEATSL-RSSLVFDSLFSSKSPKRNFGSVRRAGAIVSAAGRDSCHWNYRGQLVDENMIVL 59
           M++ SL  SS +    FS   P  N G    + A   A+ R S   N+ G+LVDE+MI+L
Sbjct: 1   MQSISLFNSSPILFHPFSPSRPCSN-GKKMNSFAPTKASMRGSADQNFSGRLVDESMIIL 59

Query: 60  RKRIHEMKVMERNYEPPAEWMEWEKQYYACYDEFICKLVGFLQTQLMNSRPSFALGMLAV 119
           RKRIHEM ++ERNYEPP++WM+WEK+YY  YD  IC+ VG LQ+QLMN+RPS ALG +A+
Sbjct: 60  RKRIHEMNMIERNYEPPSDWMDWEKRYYNKYDSIICEAVGVLQSQLMNTRPSLALGAMAL 119

Query: 120 VAMSVPASTFMVILRLLEVANGVLSA 145
           VA+SVP S+ +++  L+E+A  VL+ 
Sbjct: 120 VAISVPTSSAVLLFHLVELAKVVLAG 145

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296087196|emb|CBI33570.3| unnamed protein product [Vitis vinifera]

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/149 (49%), Positives = 101/149 (67%), Gaps = 7/149 (4%)

Query: 1   MEATSLRSSLVFDSLFSSKSPKRNF--GSVRRAGAIVSAAGRDSCHWNYRGQLVDENMIV 58
           ME+TSL  S    SL SS S K ++    VRR    V AA R     +YRG+LVDENMIV
Sbjct: 1   MESTSLFPSPTLTSLPSS-SAKASYRKKPVRR----VVAASRGPGDRDYRGKLVDENMIV 55

Query: 59  LRKRIHEMKVMERNYEPPAEWMEWEKQYYACYDEFICKLVGFLQTQLMNSRPSFALGMLA 118
           LR RI E+K++E +  PP+ WMEWEK+YY  Y+E +C+ VG LQ+ LMN RPS ALG L 
Sbjct: 56  LRMRIREVKMLETSKSPPSNWMEWEKRYYEHYNEDVCQAVGLLQSYLMNIRPSLALGFLG 115

Query: 119 VVAMSVPASTFMVILRLLEVANGVLSAIN 147
           ++++SVP ST M + + +++A G+LS ++
Sbjct: 116 LISLSVPMSTVMGMFQAIKMAKGLLSGLS 144

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817716|ref|XP_002876741.1| hypothetical protein ARALYDRAFT_904322 [Arabidopsis lyrata subsp. lyrata] gi|297322579|gb|EFH53000.1| hypothetical protein ARALYDRAFT_904322 [Arabidopsis lyrata subsp. lyrata]

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 61/115 (53%), Positives = 86/115 (74%), Gaps = 2/115 (1%)

Query: 35  VSAAGRDSCHWNYRGQLVDENMIVLRKRIHEMKVMERNYEPPAEWMEWEKQYYACYDEFI 94
           VSA+G+D  H+   G+LVDENMIVLRKRIHEMK++ERNYEPP+ WM+WEK++Y+ YD  I
Sbjct: 39  VSASGKD--HYYGGGRLVDENMIVLRKRIHEMKMVERNYEPPSHWMDWEKRFYSSYDSVI 96

Query: 95  CKLVGFLQTQLMNSRPSFALGMLAVVAMSVPASTFMVILRLLEVANGVLSAINSS 149
           C  VG LQ+ LMNSRP+ A+  L  + +S+P S+  +  RLL++ + +L+   S+
Sbjct: 97  CDSVGLLQSFLMNSRPNVAIATLLFLLVSIPVSSTAIAFRLLDLFHWLLAVATSA 151

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15226225|ref|NP_178239.1| uncharacterized protein [Arabidopsis thaliana] gi|4262237|gb|AAD14530.1| predicted by genscan and genefinder [Arabidopsis thaliana] gi|17529142|gb|AAL38797.1| unknown protein [Arabidopsis thaliana] gi|21436241|gb|AAM51259.1| unknown protein [Arabidopsis thaliana] gi|49660101|gb|AAT68341.1| hypothetical protein At2g01300 [Arabidopsis thaliana] gi|60547691|gb|AAX23809.1| hypothetical protein At2g01300 [Arabidopsis thaliana] gi|330250336|gb|AEC05430.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/129 (48%), Positives = 94/129 (72%), Gaps = 4/129 (3%)

Query: 21  PKRNFGSVRRAGAIVSAAGRDSCHWNYRGQLVDENMIVLRKRIHEMKVMERNYEPPAEWM 80
           PK+   ++R + A  +++G+D  H+   G+LVDENMIVLRKRIHEMK++ERNYEPP+ WM
Sbjct: 29  PKKKKMTMRVSAA--ASSGKD--HYYGGGRLVDENMIVLRKRIHEMKMVERNYEPPSHWM 84

Query: 81  EWEKQYYACYDEFICKLVGFLQTQLMNSRPSFALGMLAVVAMSVPASTFMVILRLLEVAN 140
           +WEK++Y  YD  IC  VG LQ+ LMNSRP+ A+  L  + +SVP S+ ++  RL+++ +
Sbjct: 85  DWEKRFYNSYDSVICDSVGLLQSFLMNSRPTVAIATLLFLLVSVPVSSTVIAFRLIDLLH 144

Query: 141 GVLSAINSS 149
            +L+A  S+
Sbjct: 145 WLLAAATSA 153

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	150
TAIR|locus:2038816	156	AT2G01300 "AT2G01300" [Arabido	0.833	0.801	0.488	4.4e-29
TAIR|locus:2196204	142	AT1G15010 "AT1G15010" [Arabido	0.7	0.739	0.528	5.2e-26

TAIR|locus:2038816 AT2G01300 "AT2G01300" [Arabidopsis thaliana (taxid:3702)]

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 63/129 (48%), Positives = 94/129 (72%)

Query:    21 PKRNFGSVRRAGAIVSAAGRDSCHWNYRGQLVDENMIVLRKRIHEMKVMERNYEPPAEWM 80
             PK+   ++R + A  +++G+D  H+   G+LVDENMIVLRKRIHEMK++ERNYEPP+ WM
Sbjct:    29 PKKKKMTMRVSAA--ASSGKD--HYYGGGRLVDENMIVLRKRIHEMKMVERNYEPPSHWM 84

Query:    81 EWEKQYYACYDEFICKLVGFLQTQLMNSRPSFALGMLAVVAMSVPASTFMVILRLLEVAN 140
             +WEK++Y  YD  IC  VG LQ+ LMNSRP+ A+  L  + +SVP S+ ++  RL+++ +
Sbjct:    85 DWEKRFYNSYDSVICDSVGLLQSFLMNSRPTVAIATLLFLLVSVPVSSTVIAFRLIDLLH 144

Query:   141 GVLSAINSS 149
              +L+A  S+
Sbjct:   145 WLLAAATSA 153

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2196204 AT1G15010 "AT1G15010" [Arabidopsis thaliana (taxid:3702)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 56/106 (52%), Positives = 77/106 (72%)

Query:    43 CHWNYRG-QLVDENMIVLRKRIHEMKVMERNYEPPAEWMEWEKQYYACYDEFICKLVGFL 101
             C   YRG + VDENM+VLRKRIHEMK++ERN+EPP+ WM+WEK++Y  YD  IC  +  L
Sbjct:    35 CADYYRGGRTVDENMVVLRKRIHEMKMVERNFEPPSHWMQWEKRFYCNYDATICDALTLL 94

Query:   102 QTQLMNSRPSFALGMLAVVAMSVPASTFMVILRLLEVANGVLSAIN 147
             QT LMNSRPS A G   ++ +SVP S+ +   R+L++A  +L A++
Sbjct:    95 QTFLMNSRPSVAFGTCLLLLVSVPVSSAVFAFRILDLALWLLDAVH 140


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.132   0.397    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      150       150   0.00087  104 3  11 22  0.41    31
                                                     30  0.39    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  601 (64 KB)
  Total size of DFA:  151 KB (2091 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.30u 0.09s 13.39t   Elapsed:  00:00:00
  Total cpu time:  13.30u 0.09s 13.39t   Elapsed:  00:00:00
  Start:  Fri May 10 07:15:50 2013   End:  Fri May 10 07:15:50 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0050832 "defense response to fungus" evidence=IEP

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00030454001 SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (330 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	150
1jek_B	36	ENV polyprotein; envelope glycoprotein, retrovirus	89.48
2z2t_D	36	Fusion inhibitor peptide SC34EK; coiled-coil, vira	80.04

>1jek_B ENV polyprotein; envelope glycoprotein, retrovirus, HIV, SIV, GP41, viral Pro; 1.50A {Synthetic} SCOP: h.3.2.1

Probab=89.48  E-value=0.41  Score=29.64  Aligned_cols=25  Identities=16%  Similarity=0.347  Sum_probs=19.6

Q ss_pred             chHHHHHHHhhhhhHHHHHHHHHHHH
Q 031927           78 EWMEWEKQYYACYDEFICKLVGFLQT  103 (150)
Q Consensus        78 ~WmeWEK~~y~~Y~s~Vc~a~g~LQ~  103 (150)
                      .|++|||+-. +|.+.|..++.--|.
T Consensus         1 TWqqWereI~-~~t~nIy~LLeeAq~   25 (36)
T 1jek_B            1 XWQQWEEEIE-QHEGNLSLLLREAAL   25 (36)
T ss_dssp             -CHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHH-HHHHHHHHHHHHHHH
Confidence            4999999987 888888888765443

>2z2t_D Fusion inhibitor peptide SC34EK; coiled-coil, viral protein/inhibitor complex; 2.10A {Synthetic}

Probab=80.04  E-value=2.2  Score=25.39  Aligned_cols=25  Identities=28%  Similarity=0.626  Sum_probs=18.9

Q ss_pred             chHHHHHHHhhhhhHHHHHHHHHHHH
Q 031927           78 EWMEWEKQYYACYDEFICKLVGFLQT  103 (150)
Q Consensus        78 ~WmeWEK~~y~~Y~s~Vc~a~g~LQ~  103 (150)
                      .||+|||+-. +|.+.+..++.--|.
T Consensus         1 TW~qWekei~-n~t~~Iy~lle~sq~   25 (36)
T 2z2t_D            1 XWLEWDRKIE-EYTKKIEELIKKSQE   25 (36)
T ss_dssp             -CHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHH-HHHHHHHHHHHHHHh
Confidence            4999998875 888888887765543

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00