Citrus Sinensis ID: 032019
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 148 | ||||||
| 307136278 | 178 | hypothetical protein [Cucumis melo subsp | 0.844 | 0.702 | 0.562 | 6e-32 | |
| 449447851 | 177 | PREDICTED: uncharacterized protein LOC10 | 0.844 | 0.706 | 0.570 | 6e-32 | |
| 255572965 | 191 | conserved hypothetical protein [Ricinus | 0.871 | 0.675 | 0.548 | 1e-31 | |
| 297743074 | 198 | unnamed protein product [Vitis vinifera] | 0.885 | 0.661 | 0.525 | 8e-31 | |
| 359482841 | 181 | PREDICTED: uncharacterized protein LOC10 | 0.885 | 0.723 | 0.533 | 1e-30 | |
| 224128512 | 189 | predicted protein [Populus trichocarpa] | 0.844 | 0.661 | 0.533 | 2e-29 | |
| 297847868 | 189 | hypothetical protein ARALYDRAFT_474571 [ | 0.824 | 0.645 | 0.525 | 2e-27 | |
| 18405239 | 188 | uncharacterized protein [Arabidopsis tha | 0.824 | 0.648 | 0.507 | 6e-27 | |
| 186491049 | 137 | uncharacterized protein [Arabidopsis tha | 0.824 | 0.890 | 0.528 | 9e-27 | |
| 224091331 | 142 | predicted protein [Populus trichocarpa] | 0.817 | 0.852 | 0.534 | 4e-26 |
| >gi|307136278|gb|ADN34105.1| hypothetical protein [Cucumis melo subsp. melo] | Back alignment and taxonomy information |
|---|
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/135 (56%), Positives = 96/135 (71%), Gaps = 10/135 (7%)
Query: 14 KESLIRRYKPIWRILLISNLALGGYMFAKARKKNSRVEDRKRPGPHDEDNQATDAVSSGL 73
KES RRYK +W +LL NLA+G Y+F + +K++ V E+ A D+ +
Sbjct: 54 KESFARRYKFLWPMLLTVNLAVGAYVFMRTKKQDEHVA---------EEEAAPDSAKTTK 104
Query: 74 TPASPLSEEPSVPPTVIEPVKVREPIPEDQQRELFKWILEEKRKVKPKDPKEKKRIDEEK 133
A+P+ EE P ++EPVKVREPIP DQQRELFKWILEEKRK+KPKD +EKKRIDEEK
Sbjct: 105 I-AAPVVEESLAKPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEK 163
Query: 134 AILKQFIRAESIPQL 148
AILK+FIRA+SIP +
Sbjct: 164 AILKEFIRAKSIPNI 178
|
Source: Cucumis melo subsp. melo Species: Cucumis melo Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449447851|ref|XP_004141680.1| PREDICTED: uncharacterized protein LOC101218777 [Cucumis sativus] gi|449480582|ref|XP_004155936.1| PREDICTED: uncharacterized protein LOC101226804 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|255572965|ref|XP_002527413.1| conserved hypothetical protein [Ricinus communis] gi|223533223|gb|EEF34979.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|297743074|emb|CBI35941.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359482841|ref|XP_003632851.1| PREDICTED: uncharacterized protein LOC100853480 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224128512|ref|XP_002329022.1| predicted protein [Populus trichocarpa] gi|222839693|gb|EEE78016.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|297847868|ref|XP_002891815.1| hypothetical protein ARALYDRAFT_474571 [Arabidopsis lyrata subsp. lyrata] gi|297337657|gb|EFH68074.1| hypothetical protein ARALYDRAFT_474571 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|18405239|ref|NP_564677.1| uncharacterized protein [Arabidopsis thaliana] gi|12321579|gb|AAG50842.1|AC073944_9 unknown protein [Arabidopsis thaliana] gi|12323174|gb|AAG51570.1|AC027034_16 unknown protein; 99945-98618 [Arabidopsis thaliana] gi|13937163|gb|AAK50075.1|AF372935_1 At1g55160/T7N22.11 [Arabidopsis thaliana] gi|22137148|gb|AAM91419.1| At1g55160/T7N22.11 [Arabidopsis thaliana] gi|332195073|gb|AEE33194.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|186491049|ref|NP_001117496.1| uncharacterized protein [Arabidopsis thaliana] gi|332195074|gb|AEE33195.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|224091331|ref|XP_002309225.1| predicted protein [Populus trichocarpa] gi|222855201|gb|EEE92748.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 148 | ||||||
| TAIR|locus:2035731 | 213 | AT1G55160 "AT1G55160" [Arabido | 0.918 | 0.638 | 0.380 | 8.8e-15 | |
| TAIR|locus:2050377 | 202 | AT2G19530 "AT2G19530" [Arabido | 0.716 | 0.524 | 0.324 | 7.6e-09 |
| TAIR|locus:2035731 AT1G55160 "AT1G55160" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 59/155 (38%), Positives = 79/155 (50%)
Query: 9 PPSYSKESLIRRYKPIWRILLISNLALGGY-------------MFAKARK-KNSRVEDRK 54
PP KES RRYK +W +LL NLA+GG+ +F R +S + R
Sbjct: 59 PPPPPKESFARRYKYVWPLLLTVNLAVGGFCSSLDENRIVFSFIFMMLRVIYDSYLFFRT 118
Query: 55 RPGPHDEDNQATDAVSSGLTPASPLSEEPSVPPTVI-EPV--KVREPIPEDQQRELFKWI 111
+ D + T A SS + A+P++ E ++ TV+ EPV K REPIPE QQRELFKW+
Sbjct: 119 KKKDLDPVVEETAAKSSSV--AAPVTVEKTLSSTVVAEPVVIKAREPIPEKQQRELFKWM 176
Query: 112 LXXXXXXXXXXXXXXXXXXXXXAILKQFIRAESIP 146
L AILKQFI +++IP
Sbjct: 177 LEEKRKVNPKNAEEKKRNDEEKAILKQFIGSKTIP 211
|
|
| TAIR|locus:2050377 AT2G19530 "AT2G19530" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00