Citrus Sinensis ID: 032039

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------15
Protein Sequence
MGKTKKDLLTKAPWRGGGDDDEADKFKDAKLKVTREPGATPTMHVPRKVKGSRYDDVDDDNDDLQLDPQLRYSFQRNYQFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFFGKFDFGEHYWELGRWKMNDFMHRSKFQPNKL
Secondary Structure (PSIPRED)
ccccHHHHHHccccccccccHHHHHHcccccEEEEcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHccccHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHccccccccccHHHHHHHHcccEEEEccccccccEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHEcEcEEcccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHccccHccHHHccccccccc
Coil and Loop (DISEMBL)
mgktkkdlltkapwrgggdddeadkfkdaklkvtrepgatptmhvprkvkgsryddvdddnddlqldpqlRYSFQRNYQFLQRVFSIdtvvkplppamaynvsrnLSFFTRIFTQFfgkfdfgeHYWELGRWKMndfmhrskfqpnkl
Flexible Loop (DISEMBL)
mgktkkdlltkapwrgggdddeadkfkdaklkvtrepgatptmhvprkvkgsryddvdddndDLQLDPQLRYSFQRNYQFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFFGKFDFGEHYWELGRWKMNDFmhrskfqpnkl
Low Complexity Region (SEG)
MGKTKKDLLTKAPWRgggdddeadkfkdakLKVTREPGATPTMHVPRKVKGSRYddvdddnddlqldPQLRYSFQRNYQFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFFGKFDFGEHYWELGRWKMNDFMHRSKFQPNKL
Disordered region (IsUnstruct)
*******************************************************************PQLRYSFQRNYQFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFFGKFDFGEHYWELGRWKMNDFM**********
Disordered Region (DISOPRED)
**************************************************************DLQLDPQLRYSFQRNYQFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFFGKFDFGEHYWELGRWKMNDFMHRSKFQP***
Disordered Region (DISEMBL)
MGKTKKDLLTKAPWRGGGDDDEADKFKDAKLKVTREPGATPTMHVPRKVKGSRYDDVDDDNDDLQLDPQLRYSFQRNYQFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFFGKFDFGEHYWELGRWKMNDFMHRSKFQPNKL
Disordered Region (DISPRO)
**********************ADKFKDAKLKVTREPGATPT*****************DNDDLQLDPQLRYSFQRNYQFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFFGKFDFGEHYWELGRWKMNDFMHRSKF*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGKTKKDLLTKAPWRGGGDDDEADKFKDAKLKVTREPGATPTMHVPRKVKGSRYDDVDDDNDDLQLDPQLRYSFQRNYQFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFFGKFDFGEHYWELGRWKMNDFMHRSKFQPNKL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	148
118482970	156	unknown [Populus trichocarpa]	0.790	0.75	0.789	4e-44
224145099	139	predicted protein [Populus trichocarpa]	0.864	0.920	0.738	1e-43
162286835	137	hypothetical protein [Kalanchoe blossfel	0.756	0.817	0.683	3e-37
255570901	140	conserved hypothetical protein [Ricinus	0.871	0.921	0.7	2e-36
225460223	143	PREDICTED: uncharacterized protein LOC10	0.871	0.902	0.639	4e-36
449447599	136	PREDICTED: uncharacterized protein LOC10	0.736	0.801	0.663	2e-35
357470345	136	hypothetical protein MTR_4g031650 [Medic	0.756	0.823	0.632	5e-35
297846366	139	hypothetical protein ARALYDRAFT_336448 [	0.756	0.805	0.690	1e-33
388502772	134	unknown [Lotus japonicus]	0.810	0.895	0.593	2e-33
18398988	138	uncharacterized protein [Arabidopsis tha	0.736	0.789	0.678	2e-32

>gi|118482970|gb|ABK93397.1| unknown [Populus trichocarpa]

 Score =  182 bits (462), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 94/119 (78%), Positives = 107/119 (89%), Gaps = 2/119 (1%)

Query: 1   MGKTKKDLLTKAPWRGGGDDDEADKFKDAKLKVTREPGATPTMHVPRKVKGSRYDDVDDD 60
           M K KK+LL+KAPWRG  DDDE++KFKDAKLKVT +PG+TPTMHVPRK K  R+DD DDD
Sbjct: 1   MTKAKKELLSKAPWRGE-DDDESNKFKDAKLKVTSQPGSTPTMHVPRK-KSQRFDDEDDD 58

Query: 61  NDDLQLDPQLRYSFQRNYQFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFFGK 119
           +  L++DP+LRYSFQRN+QFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFF +
Sbjct: 59  DQALEIDPELRYSFQRNFQFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFFAE 117

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224145099|ref|XP_002325526.1| predicted protein [Populus trichocarpa] gi|118484488|gb|ABK94119.1| unknown [Populus trichocarpa] gi|222862401|gb|EEE99907.1| predicted protein [Populus trichocarpa]

 Score =  181 bits (458), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 96/130 (73%), Positives = 108/130 (83%), Gaps = 2/130 (1%)

Query: 1   MGKTKKDLLTKAPWRGGGDDDEADKFKDAKLKVTREPGATPTMHVPRKVKGSRYDDVDDD 60
           M K KK+LL+KAPWRG  DDDE++KFKDAKLKVT +PG+TPTMHVPRK K  R+DD DDD
Sbjct: 1   MTKAKKELLSKAPWRGE-DDDESNKFKDAKLKVTSQPGSTPTMHVPRK-KSQRFDDEDDD 58

Query: 61  NDDLQLDPQLRYSFQRNYQFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFFGKF 120
           +  L++DP+LRYSFQRN+QFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFF   
Sbjct: 59  DQALEIDPELRYSFQRNFQFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFFDPE 118

Query: 121 DFGEHYWELG 130
                   LG
Sbjct: 119 GIANAQKSLG 128

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|162286835|emb|CAP20004.1| hypothetical protein [Kalanchoe blossfeldiana]

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 80/117 (68%), Positives = 92/117 (78%), Gaps = 5/117 (4%)

Query: 1   MGKTKKDLLTKAPWRGGGDDDEADKFKDAKLKVTREPGATPTMHVPRKVKGSRYDDVDDD 60
           M KTKK LL+ APWRGGG+ +    F D +LKVT +PG T TM+VP K K  +    DDD
Sbjct: 1   MSKTKKQLLSSAPWRGGGNVE----FPDGQLKVTNQPGGTATMYVPGK-KSKKGLGRDDD 55

Query: 61  NDDLQLDPQLRYSFQRNYQFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFF 117
               ++DP+LRYSFQRNYQF+QRVFSIDT+VKPLPPAMAYNVSRNLSFFTRIFTQFF
Sbjct: 56  ASTPEIDPELRYSFQRNYQFIQRVFSIDTIVKPLPPAMAYNVSRNLSFFTRIFTQFF 112

Source: Kalanchoe blossfeldiana

Species: Kalanchoe blossfeldiana

Genus: Kalanchoe

Family: Crassulaceae

Order: Saxifragales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255570901|ref|XP_002526402.1| conserved hypothetical protein [Ricinus communis] gi|223534264|gb|EEF35978.1| conserved hypothetical protein [Ricinus communis]

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/130 (70%), Positives = 103/130 (79%), Gaps = 1/130 (0%)

Query: 1   MGKTKKDLLTKAPWRGGGDDDEADKFKDAKLKVTREPGATPTMHVPRKVKGSRYDDVDDD 60
           M K K++LL+KAPWRG   D+E +KFKDAKLKVT +PG+TPTMHVPRK K     D DD+
Sbjct: 1   MAKGKRELLSKAPWRGDDADEETNKFKDAKLKVTNQPGSTPTMHVPRK-KNRNPADDDDE 59

Query: 61  NDDLQLDPQLRYSFQRNYQFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFFGKF 120
           +D L+LDP+LRYSFQRN+QFLQRVFSIDTVVKPLPPAM YNVSRNLSFFTRIFTQFF   
Sbjct: 60  DDLLELDPELRYSFQRNFQFLQRVFSIDTVVKPLPPAMQYNVSRNLSFFTRIFTQFFDPE 119

Query: 121 DFGEHYWELG 130
                   LG
Sbjct: 120 GIANAQKSLG 129

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225460223|ref|XP_002280799.1| PREDICTED: uncharacterized protein LOC100249874 [Vitis vinifera] gi|296089399|emb|CBI39218.3| unnamed protein product [Vitis vinifera]

 Score =  155 bits (393), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 85/133 (63%), Positives = 100/133 (75%), Gaps = 4/133 (3%)

Query: 1   MGKTKKDLLTKAPWRGGGDDDEADKFKDAKLKVTREPGATPTMHVPRK--VKGSRYDDVD 58
           M KTKK LL+ APWRG  D  + DKF+DA+L+ T++PG+  TM+VPRK  VK    D  D
Sbjct: 1   MSKTKKQLLSSAPWRGD-DQQQEDKFQDARLRATKQPGSASTMYVPRKKSVKTRPNDKDD 59

Query: 59  DDNDDL-QLDPQLRYSFQRNYQFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFF 117
           DD+  L ++DP+LRYSFQRN+QFLQRVFSIDT+VKPLPPAMAYNVSRNLSFFTRIFTQFF
Sbjct: 60  DDDQSLSEIDPELRYSFQRNFQFLQRVFSIDTIVKPLPPAMAYNVSRNLSFFTRIFTQFF 119

Query: 118 GKFDFGEHYWELG 130
                      LG
Sbjct: 120 DPEGIANAQKSLG 132

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449447599|ref|XP_004141555.1| PREDICTED: uncharacterized protein LOC101206859 [Cucumis sativus] gi|449518623|ref|XP_004166336.1| PREDICTED: uncharacterized LOC101206859 [Cucumis sativus]

 Score =  153 bits (387), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/113 (66%), Positives = 88/113 (77%), Gaps = 4/113 (3%)

Query: 5   KKDLLTKAPWRGGGDDDEADKFKDAKLKVTREPGATPTMHVPRKVKGSRYDDVDDDNDDL 64
           KK L + APWRG   ++E D+F  AK+KVT+ PG T  MHVPRK         ++D D L
Sbjct: 4   KKQLASSAPWRG---EEEVDEFAGAKVKVTKNPGETSVMHVPRKKSVKSKSTKEED-DSL 59

Query: 65  QLDPQLRYSFQRNYQFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFF 117
           ++DP+LRYSFQRNYQFLQRVFSIDT+VKPLPPAMAYN SRNL+FFTRIFTQFF
Sbjct: 60  EIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNASRNLNFFTRIFTQFF 112

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357470345|ref|XP_003605457.1| hypothetical protein MTR_4g031650 [Medicago truncatula] gi|217071316|gb|ACJ84018.1| unknown [Medicago truncatula] gi|355506512|gb|AES87654.1| hypothetical protein MTR_4g031650 [Medicago truncatula] gi|388490678|gb|AFK33405.1| unknown [Medicago truncatula]

 Score =  152 bits (383), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 74/117 (63%), Positives = 90/117 (76%), Gaps = 5/117 (4%)

Query: 1   MGKTKKDLLTKAPWRGGGDDDEADKFKDAKLKVTREPGATPTMHVPRKVKGSRYDDVDDD 60
           M K KK L++ APWRG  ++D  ++F DA LKVT +   T TMHVPR    +   D   D
Sbjct: 1   MAKGKKQLMSSAPWRG--EEDTTEQFPDANLKVTSQSDGTSTMHVPRSKSNTHNHD---D 55

Query: 61  NDDLQLDPQLRYSFQRNYQFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFF 117
           +D +++DP+LRYSFQRNYQFLQRVF+IDT+VKPLPP MAYNVSRNL+FFTRIFTQFF
Sbjct: 56  DDGIEIDPELRYSFQRNYQFLQRVFTIDTMVKPLPPVMAYNVSRNLNFFTRIFTQFF 112

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297846366|ref|XP_002891064.1| hypothetical protein ARALYDRAFT_336448 [Arabidopsis lyrata subsp. lyrata] gi|297336906|gb|EFH67323.1| hypothetical protein ARALYDRAFT_336448 [Arabidopsis lyrata subsp. lyrata]

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/113 (69%), Positives = 91/113 (80%), Gaps = 1/113 (0%)

Query: 5   KKDLLTKAPWRGGGDDDEADKFKDAKLKVTREPGATPTMHVPRKVKGSRYDDVDDDNDDL 64
           KK+LL+KAPWRG  DDDE+DKF +AKLKVT++      MHVP +         DDD+D L
Sbjct: 4   KKELLSKAPWRGD-DDDESDKFSNAKLKVTKDSDGMSKMHVPSRGTKKGSLADDDDDDSL 62

Query: 65  QLDPQLRYSFQRNYQFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFF 117
           ++DPQLRYSF RNYQFLQ VF+IDT+VKPLPPAMA+NVSRNLSFFTRIFTQFF
Sbjct: 63  EIDPQLRYSFNRNYQFLQSVFTIDTLVKPLPPAMAFNVSRNLSFFTRIFTQFF 115

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388502772|gb|AFK39452.1| unknown [Lotus japonicus]

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/128 (59%), Positives = 90/128 (70%), Gaps = 8/128 (6%)

Query: 3   KTKKDLLTKAPWRGGGDDDEADKFKDAKLKVTREPGATPTMHVPRKVKGSRYDDVDDDND 62
           K KK LL+ APWRG    D+ + F+DAKLK+T +PG T TMHVPR      +      +D
Sbjct: 4   KGKKQLLSSAPWRG----DDTEDFQDAKLKLTSQPGDTATMHVPRTNPNLHHQH----DD 55

Query: 63  DLQLDPQLRYSFQRNYQFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFFGKFDF 122
            +++DPQLRYSFQRN+QFLQRVFSIDTVVKPLPPAM  NVSRNL+FFTRIFTQF+     
Sbjct: 56  SIEIDPQLRYSFQRNFQFLQRVFSIDTVVKPLPPAMGQNVSRNLNFFTRIFTQFYDPEGL 115

Query: 123 GEHYWELG 130
                 LG
Sbjct: 116 ANARKSLG 123

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18398988|ref|NP_564429.1| uncharacterized protein [Arabidopsis thaliana] gi|21593921|gb|AAM65886.1| unknown [Arabidopsis thaliana] gi|26449963|dbj|BAC42102.1| unknown protein [Arabidopsis thaliana] gi|28827428|gb|AAO50558.1| unknown protein [Arabidopsis thaliana] gi|110738103|dbj|BAF00984.1| hypothetical protein [Arabidopsis thaliana] gi|332193506|gb|AEE31627.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/115 (67%), Positives = 94/115 (81%), Gaps = 6/115 (5%)

Query: 5   KKDLLTKAPWRGGGDDDEADKFKDAKLKVTREPGATPTMHVPRK--VKGSRYDDVDDDND 62
           KK+LL+KAPWRG  D+D++DKF +AKLKVT++      MHVP +   KGS     DDD+D
Sbjct: 4   KKELLSKAPWRGD-DEDDSDKFSNAKLKVTKDSDGMSKMHVPSRGTKKGSL---ADDDDD 59

Query: 63  DLQLDPQLRYSFQRNYQFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFF 117
            L++DPQLRYSF RNYQFLQ VF+IDT+VKPLPP+MA+NVSRNLSFFTRIFTQFF
Sbjct: 60  SLEIDPQLRYSFNRNYQFLQSVFTIDTLVKPLPPSMAFNVSRNLSFFTRIFTQFF 114

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	148
TAIR|locus:2012688	138	AT1G33810 "AT1G33810" [Arabido	0.756	0.811	0.554	1.1e-25

TAIR|locus:2012688 AT1G33810 "AT1G33810" [Arabidopsis thaliana (taxid:3702)]

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 66/119 (55%), Positives = 75/119 (63%)

Query:     1 MGKTKKDLLTKAPWRXXXXXXXXXXXXXXXLKVTREPGATPTMHVPRK--VKGSRYXXXX 58
             M K KK+LL+KAPWR               LKVT++      MHVP +   KGS      
Sbjct:     1 MAK-KKELLSKAPWRGDDEDDSDKFSNAK-LKVTKDSDGMSKMHVPSRGTKKGS---LAD 55

Query:    59 XXXXXXXXXPQLRYSFQRNYQFLQRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFF 117
                      PQLRYSF RNYQFLQ VF+IDT+VKPLPP+MA+NVSRNLSFFTRIFTQFF
Sbjct:    56 DDDDSLEIDPQLRYSFNRNYQFLQSVFTIDTLVKPLPPSMAFNVSRNLSFFTRIFTQFF 114


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.139   0.448    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      148       120   0.00091  102 3  11 22  0.43    30
                                                     29  0.48    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  543 (58 KB)
  Total size of DFA:  130 KB (2083 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.92u 0.12s 10.04t   Elapsed:  00:00:00
  Total cpu time:  9.92u 0.12s 10.04t   Elapsed:  00:00:00
  Start:  Fri May 10 12:25:52 2013   End:  Fri May 10 12:25:52 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0045036 "protein targeting to chloroplast" evidence=RCA

GO:0009536 "plastid" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00