Citrus Sinensis ID: 032499

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------14
Protein Sequence
MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLTTFEQ
Secondary Structure (PSIPRED)
cccEEEEEEEccccccEEEEEEEEccccEEEEEEEEEEEEEcccccccEEEEEEcccEEEEEEccccccEEEEEEEEEEEccEEEEEEEEEEccccEEEEEEEEEEEccccEEEEEEEccccEEEEEEEEEccEEEEEc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEccccccEEEEEEEEcccccEEEEEEEcccEEcccccccEEEEEEEcccEEEEEccccccccEEEEEcEEEEccccEEEEEEEccccccEEEEEEEEEEccccEEEEEEEcccccEEEEEEEccccEEEcc
Coil and Loop (DISEMBL)
mkaslkgryetdkdrGVAAATVAFNAGDVKLRasltdatvvngpslnglalavekpgffivdynvpkkdfrFQFMnsvrvadkplnltyihgrgdnrtileGTLVfdsankvsanhvlgsgncklkytyvhgglttfeq
Flexible Loop (DISEMBL)
mkaslkgryetdkdrgvaAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSAnhvlgsgncklkYTYVHGGLTTFEQ
Low Complexity Region (SEG)
MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLTTFEQ
Disordered region (IsUnstruct)
****************VAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLTT***
Disordered Region (DISOPRED)
******G***TDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLT****
Disordered Region (DISEMBL)
MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLTTFEQ
Disordered Region (DISPRO)
MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLTTF**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGSGNCKLKYTYVHGGLTTFEQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	139	2.2.26 [Sep-21-2011]
Q8H0Y1	213	Outer envelope pore prote	yes	no	0.978	0.638	0.724	9e-58
O49929	213	Outer envelope pore prote	N/A	no	0.985	0.643	0.746	2e-55
Q1H5C9	213	Outer envelope pore prote	no	no	0.978	0.638	0.695	1e-54
B8ANR3	224	Outer envelope pore prote	N/A	no	0.992	0.616	0.472	1e-31
Q75IQ4	224	Outer envelope pore prote	yes	no	0.992	0.616	0.472	2e-31

>sp|Q8H0Y1|OP24B_ARATH Outer envelope pore protein 24B, chloroplastic OS=Arabidopsis thaliana GN=OEP24B PE=1 SV=1

 Score =  221 bits (563), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 100/138 (72%), Positives = 123/138 (89%), Gaps = 2/138 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKAS+KG+Y+TDK  G+   ++AFNAGD+KLRA++TDAT+V GP+L GLALAVEKPG FI
Sbjct: 3   MKASIKGKYDTDKTSGIG--SLAFNAGDIKLRATMTDATLVAGPTLTGLALAVEKPGSFI 60

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           V+YNVPKKD RFQFMN+VR+A+KPLNLTYIH R DNRTI++G+LV DSANK+SANH++G+
Sbjct: 61  VEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 120

Query: 121 GNCKLKYTYVHGGLTTFE 138
            NCK+KYTY HGGL TFE
Sbjct: 121 NNCKIKYTYAHGGLATFE 138

High-conductance voltage-dependent solute channel with a slight selectivity for cations transporting triosephosphates, dicarboxylic acids, ATP, inorganic phosphate (Pi), sugars, and positively or negatively charged amino acids.
Arabidopsis thaliana (taxid: 3702)

>sp|O49929|OEP24_PEA Outer envelope pore protein 24, chloroplastic OS=Pisum sativum GN=OEP24 PE=1 SV=1

 Score =  214 bits (544), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 103/138 (74%), Positives = 117/138 (84%), Gaps = 1/138 (0%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKA+LKG+Y+ D +    AATVAFNAGDVKLRAS+TDAT  N PSL GL LAVEKPG F 
Sbjct: 1   MKAALKGKYDLDHNSS-GAATVAFNAGDVKLRASITDATFKNSPSLTGLVLAVEKPGSFS 59

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           VDYNVPKKDFRFQFMN+VRVA+KPLNL YIH +GDNRTIL+GTLV+D +NKVSAN+ + S
Sbjct: 60  VDYNVPKKDFRFQFMNTVRVAEKPLNLAYIHSKGDNRTILDGTLVWDPSNKVSANYAVES 119

Query: 121 GNCKLKYTYVHGGLTTFE 138
           GNCKLKY+Y H GLTT E
Sbjct: 120 GNCKLKYSYNHKGLTTIE 137

High-conductance voltage-dependent solute channel with a slight selectivity for cations transporting triosephosphates, dicarboxylic acids, ATP, inorganic phosphate (Pi), sugars, and positively or negatively charged amino acids.

Pisum sativum (taxid: 3888)

>sp|Q1H5C9|OP24A_ARATH Outer envelope pore protein 24A, chloroplastic OS=Arabidopsis thaliana GN=OEP24A PE=1 SV=1

 Score =  211 bits (537), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 96/138 (69%), Positives = 119/138 (86%), Gaps = 2/138 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKAS KG+++ DK   VA+ T  FNAG+ KLRA++TDA+ V GPS NGL+LAVEKPGFFI
Sbjct: 2   MKASFKGKFDVDKSGSVASLT--FNAGNAKLRATMTDASFVAGPSFNGLSLAVEKPGFFI 59

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           +DYNVPKKD RFQFMN++R+A+KPLNLTYIH RGDNRTI++G+ V D ANK+SAN+++G+
Sbjct: 60  IDYNVPKKDVRFQFMNTIRIAEKPLNLTYIHMRGDNRTIVDGSFVIDPANKLSANYMVGT 119

Query: 121 GNCKLKYTYVHGGLTTFE 138
            NCKLKYTYVHGG+ TFE
Sbjct: 120 KNCKLKYTYVHGGIATFE 137

High-conductance voltage-dependent solute channel with a slight selectivity for cations transporting triosephosphates, dicarboxylic acids, ATP, inorganic phosphate (Pi), sugars, and positively or negatively charged amino acids.

Arabidopsis thaliana (taxid: 3702)

>sp|B8ANR3|OEP24_ORYSI Outer envelope pore protein 24, chloroplastic OS=Oryza sativa subsp. indica GN=OEP24 PE=3 SV=1

 Score =  135 bits (339), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 70/148 (47%), Positives = 91/148 (61%), Gaps = 10/148 (6%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKA++KGRYE DK    A      +A D++ +AS TDA    GPSL GL L +EKPG F+
Sbjct: 1   MKATVKGRYEGDKATAAATLAFTPSAADLRFKASATDAAFARGPSLEGLTLTLEKPGSFL 60

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIH--------GRGDNRTILEGTLVFDSANKV 112
           +D     KD RFQFMNS  + D+ ++LTY H         +   RT L+G+L FD ANK+
Sbjct: 61  LDLKPHSKDVRFQFMNSALLLDRRVSLTYTHSTTLSPGPAKPPARTALDGSLTFDPANKL 120

Query: 113 SANHVLGSGNCKLKYTYVHGG--LTTFE 138
           S +H LGS  C++KY+Y HG   LTT E
Sbjct: 121 SLSHTLGSSGCRVKYSYAHGQDRLTTIE 148

High-conductance voltage-dependent solute channel with a slight selectivity for cations transporting triosephosphates, dicarboxylic acids, ATP, inorganic phosphate (Pi), sugars, and positively or negatively charged amino acids.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q75IQ4|OEP24_ORYSJ Outer envelope pore protein 24, chloroplastic OS=Oryza sativa subsp. japonica GN=OEP24 PE=2 SV=1

 Score =  134 bits (336), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/148 (47%), Positives = 91/148 (61%), Gaps = 10/148 (6%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKA++KGRYE DK    A      +A D++ +AS TDA    GPSL GL L +EKPG F+
Sbjct: 1   MKATVKGRYEGDKATAAATLAFTPSAADLRFKASATDAAFARGPSLEGLILTLEKPGSFL 60

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIH--------GRGDNRTILEGTLVFDSANKV 112
           +D     KD RFQFMNS  + D+ ++LTY H         +   RT L+G+L FD ANK+
Sbjct: 61  LDLKPHSKDVRFQFMNSALLLDRRVSLTYTHSTTLSPGPAKLPARTALDGSLTFDPANKL 120

Query: 113 SANHVLGSGNCKLKYTYVHGG--LTTFE 138
           S +H LGS  C++KY+Y HG   LTT E
Sbjct: 121 SLSHTLGSSGCRVKYSYAHGQDRLTTIE 148

High-conductance voltage-dependent solute channel with a slight selectivity for cations transporting triosephosphates, dicarboxylic acids, ATP, inorganic phosphate (Pi), sugars, and positively or negatively charged amino acids.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	139
224132122	212	hypothetical protein POPTRDRAFT_573245 [	0.985	0.646	0.848	8e-64
449460110	212	PREDICTED: outer envelope pore protein 2	0.978	0.641	0.797	3e-59
255538596	213	conserved hypothetical protein [Ricinus	0.978	0.638	0.804	1e-58
356552120	214	PREDICTED: uncharacterized protein LOC10	0.985	0.640	0.768	2e-56
363807866	214	uncharacterized protein LOC100785739 [Gl	0.985	0.640	0.760	4e-56
18422277	213	uncharacterized protein [Arabidopsis tha	0.978	0.638	0.724	7e-56
116831573	214	unknown [Arabidopsis thaliana]	0.978	0.635	0.724	8e-56
9758585	211	unnamed protein product [Arabidopsis tha	0.978	0.644	0.724	8e-56
297795167	213	hypothetical protein ARALYDRAFT_494707 [	0.978	0.638	0.702	1e-54
15451134	213	Unknown protein [Arabidopsis thaliana]	0.978	0.638	0.710	2e-54

>gi|224132122|ref|XP_002321261.1| hypothetical protein POPTRDRAFT_573245 [Populus trichocarpa] gi|222862034|gb|EEE99576.1| hypothetical protein POPTRDRAFT_573245 [Populus trichocarpa]

 Score =  248 bits (632), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 118/139 (84%), Positives = 129/139 (92%), Gaps = 2/139 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKASLKG+Y  D D+   AATVAFNAGDVKLRAS+TDATVVNGPSLNGLALAVEKPGFFI
Sbjct: 1   MKASLKGKY--DNDKSSTAATVAFNAGDVKLRASITDATVVNGPSLNGLALAVEKPGFFI 58

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           +DYNVPKKDFRFQFMNSV+V DKPLNLTYIH RGDNRTIL+GTLV DSANK+SAN++LG+
Sbjct: 59  IDYNVPKKDFRFQFMNSVKVVDKPLNLTYIHCRGDNRTILDGTLVVDSANKISANYMLGT 118

Query: 121 GNCKLKYTYVHGGLTTFEQ 139
            NCKLKYTYVHGGLT+FEQ
Sbjct: 119 ENCKLKYTYVHGGLTSFEQ 137

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460110|ref|XP_004147789.1| PREDICTED: outer envelope pore protein 24B, chloroplastic-like [Cucumis sativus] gi|449476784|ref|XP_004154833.1| PREDICTED: outer envelope pore protein 24B, chloroplastic-like [Cucumis sativus]

 Score =  233 bits (593), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 110/138 (79%), Positives = 124/138 (89%), Gaps = 2/138 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKA+LK +Y  D D+  AA+T+A NAGDVKLRAS+TDAT++NGPSLNGLAL+VEKPGFFI
Sbjct: 1   MKATLKTKY--DADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALSVEKPGFFI 58

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           VDYNVPKKD RFQFMN+V+VA+KPLNLTYIH   D+RTIL+GTLVFDSANKVSANH LGS
Sbjct: 59  VDYNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADSRTILDGTLVFDSANKVSANHALGS 118

Query: 121 GNCKLKYTYVHGGLTTFE 138
           GNCKLKYTYVH G TTFE
Sbjct: 119 GNCKLKYTYVHEGATTFE 136

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538596|ref|XP_002510363.1| conserved hypothetical protein [Ricinus communis] gi|223551064|gb|EEF52550.1| conserved hypothetical protein [Ricinus communis]

 Score =  230 bits (586), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 111/138 (80%), Positives = 123/138 (89%), Gaps = 2/138 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKASLKGRYETDK    AA      AGDVKLRAS+TDATVV GPSLNGL LAVEKPGFF+
Sbjct: 2   MKASLKGRYETDKSSAAAAVAFN--AGDVKLRASMTDATVVKGPSLNGLVLAVEKPGFFM 59

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           VDYNVPKKDFRFQFM++++VADKPLNLTYIH RGDNRT+L+G LV DSANK++ANH+LGS
Sbjct: 60  VDYNVPKKDFRFQFMSTIKVADKPLNLTYIHSRGDNRTVLDGALVLDSANKLAANHILGS 119

Query: 121 GNCKLKYTYVHGGLTTFE 138
           GNCKLKYTYVHGG+TTFE
Sbjct: 120 GNCKLKYTYVHGGVTTFE 137

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552120|ref|XP_003544418.1| PREDICTED: uncharacterized protein LOC100802815 [Glycine max]

 Score =  223 bits (569), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 106/138 (76%), Positives = 121/138 (87%), Gaps = 1/138 (0%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKA+LKG+Y+ DK+ G A A +A NAGDVK RAS+T+AT +NGPSL GLALAVEKPG FI
Sbjct: 1   MKATLKGKYDVDKN-GAAFANIAVNAGDVKFRASVTEATFINGPSLTGLALAVEKPGSFI 59

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           VDYNVPKKDFRFQFMN+VRV ++PLNLTY H RGDNRT+L+GT V+DSANKVSAN+ L S
Sbjct: 60  VDYNVPKKDFRFQFMNTVRVGERPLNLTYAHSRGDNRTVLDGTFVYDSANKVSANYALDS 119

Query: 121 GNCKLKYTYVHGGLTTFE 138
           GNCKLKYTYVH GLTTFE
Sbjct: 120 GNCKLKYTYVHKGLTTFE 137

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807866|ref|NP_001242188.1| uncharacterized protein LOC100785739 [Glycine max] gi|255647198|gb|ACU24067.1| unknown [Glycine max]

 Score =  222 bits (565), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 105/138 (76%), Positives = 120/138 (86%), Gaps = 1/138 (0%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKA+LKG+Y+ DK+ G A A +A NAGDVK RAS+T+AT +NGPS  GLALAVEKPG FI
Sbjct: 1   MKATLKGKYDVDKN-GAAFANIAVNAGDVKFRASVTEATFINGPSFTGLALAVEKPGSFI 59

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           VDYNVPKKDFRFQFMN+VRV ++PLNLTY H RGDNRT+L+GT V+DSANKVSAN+ L S
Sbjct: 60  VDYNVPKKDFRFQFMNTVRVGERPLNLTYAHSRGDNRTVLDGTFVYDSANKVSANYALDS 119

Query: 121 GNCKLKYTYVHGGLTTFE 138
           GNCKLKYTYVH GLTTFE
Sbjct: 120 GNCKLKYTYVHKGLTTFE 137

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18422277|ref|NP_568618.1| uncharacterized protein [Arabidopsis thaliana] gi|75151846|sp|Q8H0Y1.1|OP24B_ARATH RecName: Full=Outer envelope pore protein 24B, chloroplastic; AltName: Full=Chloroplastic outer envelope pore protein of 24 kDa B gi|24899671|gb|AAN65050.1| Unknown protein [Arabidopsis thaliana] gi|98961909|gb|ABF59284.1| unknown protein [Arabidopsis thaliana] gi|332007511|gb|AED94894.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  221 bits (563), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 100/138 (72%), Positives = 123/138 (89%), Gaps = 2/138 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKAS+KG+Y+TDK  G+   ++AFNAGD+KLRA++TDAT+V GP+L GLALAVEKPG FI
Sbjct: 3   MKASIKGKYDTDKTSGIG--SLAFNAGDIKLRATMTDATLVAGPTLTGLALAVEKPGSFI 60

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           V+YNVPKKD RFQFMN+VR+A+KPLNLTYIH R DNRTI++G+LV DSANK+SANH++G+
Sbjct: 61  VEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 120

Query: 121 GNCKLKYTYVHGGLTTFE 138
            NCK+KYTY HGGL TFE
Sbjct: 121 NNCKIKYTYAHGGLATFE 138

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116831573|gb|ABK28739.1| unknown [Arabidopsis thaliana]

 Score =  221 bits (563), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 100/138 (72%), Positives = 123/138 (89%), Gaps = 2/138 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKAS+KG+Y+TDK  G+   ++AFNAGD+KLRA++TDAT+V GP+L GLALAVEKPG FI
Sbjct: 3   MKASIKGKYDTDKTSGIG--SLAFNAGDIKLRATMTDATLVAGPTLTGLALAVEKPGSFI 60

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           V+YNVPKKD RFQFMN+VR+A+KPLNLTYIH R DNRTI++G+LV DSANK+SANH++G+
Sbjct: 61  VEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 120

Query: 121 GNCKLKYTYVHGGLTTFE 138
            NCK+KYTY HGGL TFE
Sbjct: 121 NNCKIKYTYAHGGLATFE 138

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9758585|dbj|BAB09198.1| unnamed protein product [Arabidopsis thaliana]

 Score =  221 bits (563), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 100/138 (72%), Positives = 123/138 (89%), Gaps = 2/138 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKAS+KG+Y+TDK  G+ +  +AFNAGD+KLRA++TDAT+V GP+L GLALAVEKPG FI
Sbjct: 1   MKASIKGKYDTDKTSGIGS--LAFNAGDIKLRATMTDATLVAGPTLTGLALAVEKPGSFI 58

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           V+YNVPKKD RFQFMN+VR+A+KPLNLTYIH R DNRTI++G+LV DSANK+SANH++G+
Sbjct: 59  VEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 118

Query: 121 GNCKLKYTYVHGGLTTFE 138
            NCK+KYTY HGGL TFE
Sbjct: 119 NNCKIKYTYAHGGLATFE 136

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297795167|ref|XP_002865468.1| hypothetical protein ARALYDRAFT_494707 [Arabidopsis lyrata subsp. lyrata] gi|297311303|gb|EFH41727.1| hypothetical protein ARALYDRAFT_494707 [Arabidopsis lyrata subsp. lyrata]

 Score =  217 bits (553), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 97/138 (70%), Positives = 122/138 (88%), Gaps = 2/138 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKASLKG+Y+ DK  G+   ++AFNAGD+KLRA++TDAT+V GP+L GL+LAVEKPG F+
Sbjct: 3   MKASLKGKYDADKTSGIG--SLAFNAGDIKLRATMTDATLVAGPTLTGLSLAVEKPGSFM 60

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           +++NVPKKD RFQFMN+VR+A+KPLNLTYIH R DNRTI++G+LV DSANK+SANH++G+
Sbjct: 61  IEFNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 120

Query: 121 GNCKLKYTYVHGGLTTFE 138
            NCKLKYTY HGGL TFE
Sbjct: 121 NNCKLKYTYAHGGLATFE 138

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15451134|gb|AAK96838.1| Unknown protein [Arabidopsis thaliana]

 Score =  216 bits (550), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 98/138 (71%), Positives = 122/138 (88%), Gaps = 2/138 (1%)

Query: 1   MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
           MKAS+KG+Y+TDK  G+   ++AFNAGD+KLRA++TDAT+  GP+L GLALAV+KPG FI
Sbjct: 3   MKASIKGKYDTDKTSGIG--SLAFNAGDIKLRATMTDATLGAGPTLTGLALAVKKPGSFI 60

Query: 61  VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
           V+YNVPKKD RFQFMN+VR+A+KPLNLTYIH R DNRTI++G+LV DSANK+SANH++G+
Sbjct: 61  VEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 120

Query: 121 GNCKLKYTYVHGGLTTFE 138
            NCK+KYTY HGGL TFE
Sbjct: 121 NNCKIKYTYAHGGLATFE 138

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	139
TAIR|locus:2160051	213	AT5G42960 "AT5G42960" [Arabido	0.978	0.638	0.724	4.9e-53
UNIPROTKB|O49929	213	OEP24 "Outer envelope pore pro	0.985	0.643	0.746	5.1e-51
TAIR|locus:2028210	213	AT1G45170 "AT1G45170" [Arabido	0.978	0.638	0.695	2.2e-50

TAIR|locus:2160051 AT5G42960 "AT5G42960" [Arabidopsis thaliana (taxid:3702)]

 Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
 Identities = 100/138 (72%), Positives = 123/138 (89%)

Query:     1 MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
             MKAS+KG+Y+TDK  G+ +  +AFNAGD+KLRA++TDAT+V GP+L GLALAVEKPG FI
Sbjct:     3 MKASIKGKYDTDKTSGIGS--LAFNAGDIKLRATMTDATLVAGPTLTGLALAVEKPGSFI 60

Query:    61 VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
             V+YNVPKKD RFQFMN+VR+A+KPLNLTYIH R DNRTI++G+LV DSANK+SANH++G+
Sbjct:    61 VEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 120

Query:   121 GNCKLKYTYVHGGLTTFE 138
              NCK+KYTY HGGL TFE
Sbjct:   121 NNCKIKYTYAHGGLATFE 138

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

UNIPROTKB|O49929 OEP24 "Outer envelope pore protein 24, chloroplastic" [Pisum sativum (taxid:3888)]

 Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
 Identities = 103/138 (74%), Positives = 117/138 (84%)

Query:     1 MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
             MKA+LKG+Y+ D +    AATVAFNAGDVKLRAS+TDAT  N PSL GL LAVEKPG F 
Sbjct:     1 MKAALKGKYDLDHNSS-GAATVAFNAGDVKLRASITDATFKNSPSLTGLVLAVEKPGSFS 59

Query:    61 VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
             VDYNVPKKDFRFQFMN+VRVA+KPLNL YIH +GDNRTIL+GTLV+D +NKVSAN+ + S
Sbjct:    60 VDYNVPKKDFRFQFMNTVRVAEKPLNLAYIHSKGDNRTILDGTLVWDPSNKVSANYAVES 119

Query:   121 GNCKLKYTYVHGGLTTFE 138
             GNCKLKY+Y H GLTT E
Sbjct:   120 GNCKLKYSYNHKGLTTIE 137

GO:0015288 "porin activity" evidence=IDA

GO:0022843 "voltage-gated cation channel activity" evidence=IDA

GO:0031359 "integral to chloroplast outer membrane" evidence=IDA

GO:0034426 "etioplast membrane" evidence=IDA

GO:0034765 "regulation of ion transmembrane transport" evidence=IDA

GO:0046930 "pore complex" evidence=IDA

TAIR|locus:2028210 AT1G45170 "AT1G45170" [Arabidopsis thaliana (taxid:3702)]

 Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
 Identities = 96/138 (69%), Positives = 119/138 (86%)

Query:     1 MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
             MKAS KG+++ DK   VA+ T  FNAG+ KLRA++TDA+ V GPS NGL+LAVEKPGFFI
Sbjct:     2 MKASFKGKFDVDKSGSVASLT--FNAGNAKLRATMTDASFVAGPSFNGLSLAVEKPGFFI 59

Query:    61 VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
             +DYNVPKKD RFQFMN++R+A+KPLNLTYIH RGDNRTI++G+ V D ANK+SAN+++G+
Sbjct:    60 IDYNVPKKDVRFQFMNTIRIAEKPLNLTYIHMRGDNRTIVDGSFVIDPANKLSANYMVGT 119

Query:   121 GNCKLKYTYVHGGLTTFE 138
              NCKLKYTYVHGG+ TFE
Sbjct:   120 KNCKLKYTYVHGGIATFE 137


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.135   0.389    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      139       139   0.00091  102 3  11 22  0.44    31
                                                     30  0.46    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  522 (56 KB)
  Total size of DFA:  114 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.05u 0.15s 12.20t   Elapsed:  00:00:00
  Total cpu time:  12.05u 0.15s 12.20t   Elapsed:  00:00:00
  Start:  Sat May 11 07:20:52 2013   End:  Sat May 11 07:20:52 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0045036 "protein targeting to chloroplast" evidence=RCA

GO:0009536 "plastid" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O49929	OEP24_PEA	No assigned EC number	0.7463	0.9856	0.6431	N/A	no
Q8H0Y1	OP24B_ARATH	No assigned EC number	0.7246	0.9784	0.6384	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	139
cd02861	82	E_set_proteins_like E or "early" set-like proteins	86.71

>cd02861 E_set_proteins_like E or "early" set-like proteins

Probab=86.71  E-value=4.9  Score=26.95  Aligned_cols=68  Identities=19%  Similarity=0.422  Sum_probs=44.4

Q ss_pred             cCceEEeeeeeceeeeeCCcccceEEEeecCceEEEeecCCCCCeeEEeeeeeeecceeeeeEEeeecCCceeEEeeeEE
Q 032499           26 AGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFIVDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLV  105 (139)
Q Consensus        26 aGDlkLrAs~TDatfv~gpSL~Gl~l~vEKPGsF~iDy~vp~~d~RFQFmn~~~v~~K~lnlTY~H~~~~nrT~lDgtl~  105 (139)
                      |..|.|..+..+-.        ...+.-++.|.|.+...+|.-.-+|+|                        ++||...
T Consensus        13 a~~V~v~G~fn~W~--------~~~m~~~~~G~w~~~~~l~~G~y~Ykf------------------------~vdg~~~   60 (82)
T cd02861          13 ADSVYLAGSFNNWN--------AIPMEREGDGLWVVTVELRPGRYEYKF------------------------VVDGEWV   60 (82)
T ss_pred             CCEEEEEeECCCCC--------cccCEECCCCcEEEEEeCCCCcEEEEE------------------------EECCEEe
Confidence            45666666655432        233433445889888888887778888                        4556655


Q ss_pred             -EecCCceeEEEEecCCceeE
Q 032499          106 -FDSANKVSANHVLGSGNCKL  125 (139)
Q Consensus       106 -~D~aNK~s~~y~f~s~~ckl  125 (139)
                       .||.|.-...=.|+..||-|
T Consensus        61 ~~DP~~~~~~~~~~g~~n~v~   81 (82)
T cd02861          61 IVDPNAAAYVDDGFGGKNAVF   81 (82)
T ss_pred             eCCCCCCceecCCCCccceEc
Confidence             78888777666677666643

These alpha amylase-like sugar utilizing enzymes which may be related to the immunoglobulin and/or fibronectin type III superfamilies are associated with different types of catalytic domains at either the N-terminal or C-terminal end. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00