Citrus Sinensis ID: 032559


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------14
MAHFPSGTQWLHSRVDVNGYEEYCGTEYRSAGCTEEYSVVERSLQHGGEEESLMLEGDIGGGLILQRKLTIPKDNPKIFKIDSKILARKVGAGSGGFSRKFSSVSSGTVNLELWSEERPVSKQSPLAVSHEYEVIKIP
ccccccccccEEEEEEcccEEEEcccEEEccccccHHHHHHHHHHHccccEEEEEEEEccccEEEEEEEEcccccccEEEEcccEEEEEEccccccccEEEEEEEEcEEEEEEcccccccccccccEEEEEEEEEEcc
ccccccccccccccEEcccEEEccccEEccccccHHHHHHHHHHHHccccEEEEEEcccccHHEEEEEEEcccccccEEEEccEEEEEEcccccccccEEEEEEEcccEEEEEcccccccccccccEEEEEEEEEEcc
mahfpsgtqwlhsrvdvngyeeycgteyrsagcteEYSVVERSlqhggeeeslmlegdiggglilqrkltipkdnpkifkidsKILARKvgagsggfsrkfssvssgtvnlelwseerpvskqsplavsheyevikip
mahfpsgtqwlhsrvDVNGYEEYCGTEyrsagcteEYSVVERSLQHGGEEESLMLEGDIGGGLILQRkltipkdnpkifkidskilARKVGAGSGGFSRKFSSVSSGTVNLELWseerpvskqsplavsheyevikip
MAHFPSGTQWLHSRVDVNGYEEYCGTEYRSAGCTEEYSVVERSLQHGGEEESLMLEGDIGGGLILQRKLTIPKDNPKIFKIDSKILARKVGAGSGGFSRKFSSVSSGTVNLELWSEERPVSKQSPLAVSHEYEVIKIP
********QWLHSRVDVNGYEEYCGTEYRSAGCTEEYSVVERSL********LMLEGDIGGGLILQRKLTIPKDNPKIFKIDSKILARKVGAG*********************************************
****PSGTQWLHSRVDVNGYEEYCGTEYRSAGCTEEYSVVERS*Q*****ESLMLEGDIGGGLILQRKLTIPKDNPKIFKIDSKILARKVGAGSGGFSRKFSSVSSGTVNLELWSEERPVSKQSPLAVSHEYEVIKIP
MAHFPSGTQWLHSRVDVNGYEEYCGTEYRSAGCTEEYSVVERSLQHGGEEESLMLEGDIGGGLILQRKLTIPKDNPKIFKIDSKILARKVGAGSGGFSRKFSSVSSGTVNLELWS**********LAVSHEYEVIKIP
*******TQWLHSRVDVNGYEEYCGTEYRSAGCTEEYSVVERSLQHGGEEESLMLEGDIGGGLILQRKLTIPKDNPKIFKIDSKILARKVGAGSGGFSRKFSSVSSGTVNLELWSEERPVSKQSPLAVSHEYEVIKIP
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MAHFPSGTQWLHSRVDVNGYEEYCGTEYRSAGCTEEYSVVERSLQHGGEEESLMLEGDIGGGLILQRKLTIPKDNPKIFKIDSKILARKVGAGSGGFSRKFSSVSSGTVNLELWSEERPVSKQSPLAVSHEYEVIKIP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query138
297831124 988 hypothetical protein ARALYDRAFT_898886 [ 0.717 0.100 0.747 1e-39
18403833 991 heteroglycan glucosidase 1 [Arabidopsis 0.717 0.099 0.737 3e-38
255557713 991 neutral alpha-glucosidase ab precursor, 0.717 0.099 0.747 4e-38
9294522 959 alpha glucosidase-like protein [Arabidop 0.717 0.103 0.737 4e-38
224138396 1001 predicted protein [Populus trichocarpa] 0.717 0.098 0.747 7e-38
222636918 973 hypothetical protein OsJ_23995 [Oryza sa 0.717 0.101 0.737 6e-37
218199495 974 hypothetical protein OsI_25772 [Oryza sa 0.717 0.101 0.737 6e-37
357110982 981 PREDICTED: alpha-glucosidase 2-like [Bra 0.717 0.100 0.707 3e-35
359474648 991 PREDICTED: alpha-glucosidase 2-like [Vit 0.717 0.099 0.666 1e-34
296088485 1057 unnamed protein product [Vitis vinifera] 0.717 0.093 0.666 1e-34
>gi|297831124|ref|XP_002883444.1| hypothetical protein ARALYDRAFT_898886 [Arabidopsis lyrata subsp. lyrata] gi|297329284|gb|EFH59703.1| hypothetical protein ARALYDRAFT_898886 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
 Score =  167 bits (423), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 74/99 (74%), Positives = 89/99 (89%)

Query: 1   MAHFPSGTQWLHSRVDVNGYEEYCGTEYRSAGCTEEYSVVERSLQHGGEEESLMLEGDIG 60
           M H PSG QWLHSR+D+NGYEEY GTEYRSAGCTEEY+V+ER L+H GEEESL+LEGD+G
Sbjct: 778 MTHVPSGIQWLHSRIDINGYEEYSGTEYRSAGCTEEYNVIERDLEHAGEEESLILEGDVG 837

Query: 61  GGLILQRKLTIPKDNPKIFKIDSKILARKVGAGSGGFSR 99
           GGL+L+RK++IPK+NP++F+I S I AR VGAGSGGFSR
Sbjct: 838 GGLVLRRKISIPKENPRVFQIASSIEARSVGAGSGGFSR 876




Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18403833|ref|NP_566736.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] gi|186510357|ref|NP_001118685.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] gi|16648903|gb|AAL24303.1| alpha glucosidase-like protein [Arabidopsis thaliana] gi|27311799|gb|AAO00865.1| Unknown protein [Arabidopsis thaliana] gi|31711788|gb|AAP68250.1| At3g23640 [Arabidopsis thaliana] gi|332643272|gb|AEE76793.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] gi|332643273|gb|AEE76794.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255557713|ref|XP_002519886.1| neutral alpha-glucosidase ab precursor, putative [Ricinus communis] gi|223540932|gb|EEF42490.1| neutral alpha-glucosidase ab precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|9294522|dbj|BAB02784.1| alpha glucosidase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224138396|ref|XP_002326592.1| predicted protein [Populus trichocarpa] gi|222833914|gb|EEE72391.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|222636918|gb|EEE67050.1| hypothetical protein OsJ_23995 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|218199495|gb|EEC81922.1| hypothetical protein OsI_25772 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|357110982|ref|XP_003557294.1| PREDICTED: alpha-glucosidase 2-like [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|359474648|ref|XP_002263148.2| PREDICTED: alpha-glucosidase 2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296088485|emb|CBI37476.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query138
TAIR|locus:2088035991 HGL1 "heteroglycan glucosidase 0.717 0.099 0.737 8.6e-49
TAIR|locus:2088035 HGL1 "heteroglycan glucosidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 413 (150.4 bits), Expect = 8.6e-49, Sum P(2) = 8.6e-49
 Identities = 73/99 (73%), Positives = 87/99 (87%)

Query:     1 MAHFPSGTQWLHSRVDVNGYEEYCGTEYRSAGCTEEYSVVERSLQHGGEEESLMLEGDIG 60
             M H PSG QWLHSR+D+NGYEEY GTEYRSAGCTEEY+V+ER L+H GEEESL+LEGD+G
Sbjct:   781 MTHVPSGIQWLHSRIDINGYEEYSGTEYRSAGCTEEYNVIERDLEHAGEEESLILEGDVG 840

Query:    61 GGLILQRKLTIPKDNPKIFKIDSKILARKVGAGSGGFSR 99
             GGL+L+RK++I KDN ++F+I S I AR VGAGSGGFSR
Sbjct:   841 GGLVLRRKISIAKDNQRVFRIASSIEARSVGAGSGGFSR 879


GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005634 "nucleus" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query138
PLN02763978 PLN02763, PLN02763, hydrolase, hydrolyzing O-glyco 3e-54
PLN02763978 PLN02763, PLN02763, hydrolase, hydrolyzing O-glyco 7e-14
>gnl|CDD|215408 PLN02763, PLN02763, hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
 Score =  182 bits (462), Expect = 3e-54
 Identities = 72/99 (72%), Positives = 83/99 (83%)

Query: 1   MAHFPSGTQWLHSRVDVNGYEEYCGTEYRSAGCTEEYSVVERSLQHGGEEESLMLEGDIG 60
           M H PSG QWLHSR+++ GYEEY GTEYRSAGCTEEY VVER L+  G EESL LEGDIG
Sbjct: 769 MIHKPSGYQWLHSRIEIGGYEEYSGTEYRSAGCTEEYKVVERDLEQAGGEESLGLEGDIG 828

Query: 61  GGLILQRKLTIPKDNPKIFKIDSKILARKVGAGSGGFSR 99
           GGL+L R+++IPKD+PK+ KI S I+AR VGAGSGGFSR
Sbjct: 829 GGLVLAREISIPKDSPKVVKISSSIVARSVGAGSGGFSR 867


Length = 978

>gnl|CDD|215408 PLN02763, PLN02763, hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 138
PLN02763978 hydrolase, hydrolyzing O-glycosyl compounds 100.0
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
Probab=100.00  E-value=1.5e-75  Score=541.21  Aligned_cols=137  Identities=72%  Similarity=1.216  Sum_probs=135.0

Q ss_pred             CccCCCCccceeeeeecCceeeeccceeecCCccchhhhhhhhhhhCCCcceEEEeeecccceEEEEEeeccCCCCceEE
Q 032559            1 MAHFPSGTQWLHSRVDVNGYEEYCGTEYRSAGCTEEYSVVERSLQHGGEEESLMLEGDIGGGLILQRKLTIPKDNPKIFK   80 (138)
Q Consensus         1 M~H~PSg~qWl~sr~e~~GYEEysgtE~rsaGctEEY~Vi~R~l~~~~~ee~l~lEgDiGGGLvl~R~I~i~k~~pki~~   80 (138)
                      |+|||||+||||||+|+|||||||||||||||||||||||+|+|+|+++||+|+|||||||||||+|+|+|||||||+|+
T Consensus       769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  848 (978)
T PLN02763        769 MIHKPSGYQWLHSRIEIGGYEEYSGTEYRSAGCTEEYKVVERDLEQAGGEESLGLEGDIGGGLVLAREISIPKDSPKVVK  848 (978)
T ss_pred             EEecCCcchhhhhhcccCceeeccccccccCCCchhHHHHHHHHHHcCCceeEEeeecccCcEEEEEEeecccCCCceEE
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeceeEEeeeccCCCCccee--------------------EEee------------------------------------
Q 032559           81 IDSKILARKVGAGSGGFSRK--------------------FSSV------------------------------------  104 (138)
Q Consensus        81 I~SsI~ArsVGAgSGGfSrl--------------------ftai------------------------------------  104 (138)
                      |||+|+||||||||||||||                    ||||                                    
T Consensus       849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  928 (978)
T PLN02763        849 ISSSIVARSVGAGSGGFSRLVCLRVHPTFKLLHPTESFVSFTAIDGSKHELWPEFGEQFYEGNDRPNGEWMLVDKETGLA  928 (978)
T ss_pred             EeeeeEEeecccCCCCcceeEEEEeccceeecCccceeEEEEeccCcccccCCcccceeeecCCCCCceEEEEeccccee
Confidence            99999999999999999999                    7777                                    


Q ss_pred             -----------------eCCeeeeeeccccccCCCCCCeeEeeeeeEEec
Q 032559          105 -----------------SSGTVNLELWSEERPVSKQSPLAVSHEYEVIKI  137 (138)
Q Consensus       105 -----------------g~g~vnleLWSeeRpVSk~tPL~IsH~Yev~~~  137 (138)
                                       |||+||||||||||||||||||+|||+||||++
T Consensus       929 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  978 (978)
T PLN02763        929 VVNRFDVKEVEKCHVHWGPGTVNLELWSEERPVSKETPLSISHEYEVIDT  978 (978)
T ss_pred             EEeecChhheEEEEEEecCCceeeeeecccCCcccCCCceEeeeeEEecC
Confidence                             999999999999999999999999999999985




Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00