Citrus Sinensis ID: 032957

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Protein Sequence
MAQSLNNSPSCTLYQIRNPRQNSSPPPSSLLLKRSSSSSLRLRSNNYRNKNGVRACFSSPIDEPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEEEIKAEDSKSDEEVPEQIEIE
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccccccccccccccccEEEEEc
Secondary Structure Prediction (SSPRO)
cHHHHcccccccHHHcccccccccccccHHcccccccccEEEEEEEccccccEEEEEccccccHHHHHHHcccEEEEHHHHHEEEEEcccccHHHHHHHHHHHHccccccccccccccccccccEEEEEc
Coil and Loop (DISEMBL)
maqslnnspsctlyqirnprqnsspppsslllkrssssslrlrsnnyrnkngvracfsspidepiLKEALKEPVAFVGGMFAGLLrldlnddplkdWVTRTVEAagiteeeikaedsksdeevpeqieie
Flexible Loop (DISEMBL)
maqslnnspsctlyqirnprqnsspppsslllkrssssslrlrsnnyrnkngvracfSSPIDEPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTRTVeaagiteeeikaedsksdeevpeqieie
Low Complexity Region (SEG)
MAQSLNNSPSCTLYQIrnprqnsspppsslllkrssssslrlrsnnyrnknGVRACFSSPIDEPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEEEIKAEDSKSDEEVPEQIEIE
Disordered region (IsUnstruct)
****************************************************VRACFSSPIDEPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGI***********************
Disordered Region (DISOPRED)
****************************************************VRACFSSPIDEPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTR******************************
Disordered Region (DISEMBL)
*********SCTLYQIRNPR********************RLRSNNYRNKNGVRACFSSPIDEPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEEE*******************
Disordered Region (DISPRO)
************************************SSSLRLRSNNYRNKNGVRACFSSPIDEPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTRTVEAA******************P******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAQSLNNSPSCTLYQIRNPRQNSSPPPSSLLLKRSSSSSLRLRSNNYRNKNGVRACFSSPIDEPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEEEIKAEDSKSDEEVPEQIEIE
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	130	2.2.26 [Sep-21-2011]
Q9FZ89	123	UPF0426 protein At1g28150	yes	no	0.576	0.609	0.727	4e-25
P74786	70	UPF0426 protein ssl0294 O	N/A	no	0.492	0.914	0.338	2e-06
Q8YQ06	72	UPF0426 protein asl4034 O	yes	no	0.515	0.930	0.342	1e-05

>sp|Q9FZ89|Y1815_ARATH UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana GN=At1g28150 PE=1 SV=1

 Score =  113 bits (282), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 56/77 (72%), Positives = 67/77 (87%), Gaps = 2/77 (2%)

Query: 55  ACFSSPIDEPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEEEIKA 114
           +CF+ P  EPIL EALKEP+AF+GGMFAGLLRLDLN++PLKDWVTRTVEA+GITEEE+ A
Sbjct: 48  SCFNLP-QEPILSEALKEPIAFLGGMFAGLLRLDLNEEPLKDWVTRTVEASGITEEEVDA 106

Query: 115 EDSKS-DEEVPEQIEIE 130
           +   S DE+ P+QIEIE
Sbjct: 107 DGVVSNDEDSPQQIEIE 123

Arabidopsis thaliana (taxid: 3702)

>sp|P74786|Y294_SYNY3 UPF0426 protein ssl0294 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=ssl0294 PE=3 SV=1

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 4/68 (5%)

Query: 63  EPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEEEIKAEDSKSDEE 122
           +P+ +E  ++P+AF GG  +G+LRL L DDPLK W+ +     G+T+      +  + + 
Sbjct: 7   KPVTRELCQQPIAFAGGFVSGVLRLKLTDDPLKKWLQK----QGVTDFSGADINQTAQDN 62

Query: 123 VPEQIEIE 130
            P+ I+I+
Sbjct: 63  RPQSIDID 70

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q8YQ06|Y4034_NOSS1 UPF0426 protein asl4034 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=asl4034 PE=3 SV=1

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 6/73 (8%)

Query: 61  IDE--PILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEEEIKAEDSK 118
           IDE  PI K+ ++ P +F+GG  +G+LRL+L DDP+K W+ +     G+        D+ 
Sbjct: 3   IDELSPIFKQLVQHPASFLGGFASGVLRLNLADDPVKSWLDKQ---RGVNSYSFPVTDAH 59

Query: 119 SDEEV-PEQIEIE 130
           + +   P+ I I+
Sbjct: 60  NGKASGPQSISID 72

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	130
224078960	130	predicted protein [Populus trichocarpa]	0.584	0.584	0.736	2e-25
351720927	131	uncharacterized protein LOC100500510 [Gl	0.623	0.618	0.682	4e-25
255569027	130	conserved hypothetical protein [Ricinus	0.976	0.976	0.518	1e-24
225454569	122	PREDICTED: UPF0426 protein At1g28150, ch	0.930	0.991	0.534	2e-24
297851252	129	hypothetical protein ARALYDRAFT_473023 [	0.576	0.581	0.740	7e-24
356576597	131	PREDICTED: UPF0426 protein At1g28150, ch	0.946	0.938	0.496	2e-23
18396668	123	uncharacterized protein [Arabidopsis tha	0.576	0.609	0.727	3e-23
21553386	123	unknown [Arabidopsis thaliana]	0.576	0.609	0.714	8e-23
115459546	127	Os04g0528100 [Oryza sativa Japonica Grou	0.553	0.566	0.647	3e-22
449439251	128	PREDICTED: UPF0426 protein At1g28150, ch	0.692	0.703	0.595	4e-22

>gi|224078960|ref|XP_002305696.1| predicted protein [Populus trichocarpa] gi|118485100|gb|ABK94413.1| unknown [Populus trichocarpa] gi|222848660|gb|EEE86207.1| predicted protein [Populus trichocarpa]

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/76 (73%), Positives = 68/76 (89%)

Query: 55  ACFSSPIDEPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEEEIKA 114
           +C  +P +EPILK+ALKEPVAF+GGMFAGLLRLDLN+DPLK+WVTRTVEA+GITEE+I A
Sbjct: 55  SCLFNPSNEPILKDALKEPVAFMGGMFAGLLRLDLNEDPLKEWVTRTVEASGITEEDIDA 114

Query: 115 EDSKSDEEVPEQIEIE 130
           E S+ +E VP +IEIE
Sbjct: 115 EGSQPEERVPLEIEIE 130

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351720927|ref|NP_001235401.1| uncharacterized protein LOC100500510 [Glycine max] gi|255630504|gb|ACU15610.1| unknown [Glycine max]

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 56/82 (68%), Positives = 72/82 (87%), Gaps = 1/82 (1%)

Query: 49  NKNGVRACFSSPIDEPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGIT 108
           N+NGV+A F +P  +PI+KEALKEPVAF+GGMFAG+LRLDLN++PLK+WVTRTVEAAGI+
Sbjct: 51  NRNGVKAFFFNPEQDPIVKEALKEPVAFLGGMFAGILRLDLNEEPLKEWVTRTVEAAGIS 110

Query: 109 EEEIKAEDSKSDEEVPEQIEIE 130
           EEE   E+S + EE P++I+IE
Sbjct: 111 EEEANTEES-TTEEAPQEIQIE 131

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255569027|ref|XP_002525483.1| conserved hypothetical protein [Ricinus communis] gi|223535220|gb|EEF36898.1| conserved hypothetical protein [Ricinus communis]

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/133 (51%), Positives = 89/133 (66%), Gaps = 6/133 (4%)

Query: 1   MAQSLNNSPSCTLYQIRNPRQNSSPPPSSLLLKRSSSSSLRLRSNNYRNKNGVR---ACF 57
           MA  +N S SC++  +R           S L  R+    L L S   R  +G++   +CF
Sbjct: 1   MALCMNTS-SCSVKTLRETNLRRLSSSISWLKSRNDGRFLYLGSIK-REGSGMKVQASCF 58

Query: 58  SSPIDEPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEEEIKAEDS 117
            +P ++PILKE LKEPVAF+GGMFAGLLRLDL ++PLK+WVTRTVEA+GIT E+I A  S
Sbjct: 59  FNPTNQPILKEVLKEPVAFLGGMFAGLLRLDLEEEPLKEWVTRTVEASGITVEDIDAAGS 118

Query: 118 KSDEEVPEQIEIE 130
           K  EEVP+QI+IE
Sbjct: 119 KP-EEVPQQIDIE 130

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454569|ref|XP_002263375.1| PREDICTED: UPF0426 protein At1g28150, chloroplastic [Vitis vinifera] gi|297737204|emb|CBI26405.3| unnamed protein product [Vitis vinifera]

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/131 (53%), Positives = 93/131 (70%), Gaps = 10/131 (7%)

Query: 1   MAQSLNNSPSCTLYQIR-NPRQNSSPPPSSLLLKRSSSSSLRLRSNNYRNKNGVRACFSS 59
           M++   NSP+ T   +  +P + S+   +S L++       + ++  +RN +GV A FS 
Sbjct: 1   MSRLFLNSPAPTSALVTPHPPKFSTTYHTSYLVRLPQ---WKWKTTCFRN-SGVDAFFS- 55

Query: 60  PIDEPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEEEIKAEDSKS 119
              +PIL++ALKEPVAF GGMFAGLLRLDLN+DPLK+WVTRTVEA+GI+EEEI  E SK 
Sbjct: 56  ---DPILQQALKEPVAFAGGMFAGLLRLDLNEDPLKEWVTRTVEASGISEEEIDDEGSKP 112

Query: 120 DEEVPEQIEIE 130
            EEVP+QIEIE
Sbjct: 113 -EEVPQQIEIE 122

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297851252|ref|XP_002893507.1| hypothetical protein ARALYDRAFT_473023 [Arabidopsis lyrata subsp. lyrata] gi|297339349|gb|EFH69766.1| hypothetical protein ARALYDRAFT_473023 [Arabidopsis lyrata subsp. lyrata]

 Score =  115 bits (287), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 57/77 (74%), Positives = 67/77 (87%), Gaps = 2/77 (2%)

Query: 55  ACFSSPIDEPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEEEIKA 114
           +CF+ P  EPIL EALKEP+AF+GGMFAGLLRLDLN++PLKDWVTRTVEA+GITEEE+ A
Sbjct: 54  SCFNLP-QEPILSEALKEPIAFLGGMFAGLLRLDLNEEPLKDWVTRTVEASGITEEEVDA 112

Query: 115 EDSKS-DEEVPEQIEIE 130
           +   S DEE P+QIEIE
Sbjct: 113 DGMVSNDEESPQQIEIE 129

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576597|ref|XP_003556417.1| PREDICTED: UPF0426 protein At1g28150, chloroplastic-like [Glycine max]

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/131 (49%), Positives = 89/131 (67%), Gaps = 8/131 (6%)

Query: 5   LNNSPSCTLYQIR--NPRQNS---SPPPSSLLLKRSSSSSLRLRSNNYRNKNGVRACFSS 59
           L NSP   L   R   P+Q +   S  P+  ++    S+++   +    N NGV+A F +
Sbjct: 4   LVNSPLLPLQSTRWLKPKQEARFLSHGPT--IIGGGMSTNIFGTAKRNGNGNGVKAFFIN 61

Query: 60  PIDEPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEEEIKAEDSKS 119
           P  + I+KEALKEPVAF+GGMFAG+LRLDLN++PLK+WVTRT EAAGI+EEE   E+S +
Sbjct: 62  PEQDLIIKEALKEPVAFLGGMFAGILRLDLNEEPLKEWVTRTAEAAGISEEEANTEES-T 120

Query: 120 DEEVPEQIEIE 130
            EE P++I+IE
Sbjct: 121 TEEAPQEIQIE 131

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18396668|ref|NP_564301.1| uncharacterized protein [Arabidopsis thaliana] gi|75173383|sp|Q9FZ89.1|Y1815_ARATH RecName: Full=UPF0426 protein At1g28150, chloroplastic; Flags: Precursor gi|9795623|gb|AAF98441.1|AC021044_20 Hypothetical protein [Arabidopsis thaliana] gi|12322997|gb|AAG51487.1|AC069471_18 unknown protein [Arabidopsis thaliana] gi|22022534|gb|AAM83225.1| At1g28150/F3H9_17 [Arabidopsis thaliana] gi|23505747|gb|AAN28733.1| At1g28150/F3H9_17 [Arabidopsis thaliana] gi|332192804|gb|AEE30925.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  113 bits (282), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 56/77 (72%), Positives = 67/77 (87%), Gaps = 2/77 (2%)

Query: 55  ACFSSPIDEPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEEEIKA 114
           +CF+ P  EPIL EALKEP+AF+GGMFAGLLRLDLN++PLKDWVTRTVEA+GITEEE+ A
Sbjct: 48  SCFNLP-QEPILSEALKEPIAFLGGMFAGLLRLDLNEEPLKDWVTRTVEASGITEEEVDA 106

Query: 115 EDSKS-DEEVPEQIEIE 130
           +   S DE+ P+QIEIE
Sbjct: 107 DGVVSNDEDSPQQIEIE 123

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21553386|gb|AAM62479.1| unknown [Arabidopsis thaliana]

 Score =  111 bits (278), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 55/77 (71%), Positives = 67/77 (87%), Gaps = 2/77 (2%)

Query: 55  ACFSSPIDEPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEEEIKA 114
           +CF+ P  EPIL E+LKEP+AF+GGMFAGLLRLDLN++PLKDWVTRTVEA+GITEEE+ A
Sbjct: 48  SCFNLP-QEPILSESLKEPIAFLGGMFAGLLRLDLNEEPLKDWVTRTVEASGITEEEVDA 106

Query: 115 EDSKS-DEEVPEQIEIE 130
           +   S DE+ P+QIEIE
Sbjct: 107 DGVVSNDEDSPQQIEIE 123

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115459546|ref|NP_001053373.1| Os04g0528100 [Oryza sativa Japonica Group] gi|21742078|emb|CAD41189.1| OSJNBa0074L08.1 [Oryza sativa Japonica Group] gi|38344453|emb|CAE05659.2| OSJNBa0038O10.25 [Oryza sativa Japonica Group] gi|113564944|dbj|BAF15287.1| Os04g0528100 [Oryza sativa Japonica Group] gi|116310974|emb|CAH67910.1| OSIGBa0115K01-H0319F09.16 [Oryza sativa Indica Group] gi|125549100|gb|EAY94922.1| hypothetical protein OsI_16725 [Oryza sativa Indica Group] gi|125591060|gb|EAZ31410.1| hypothetical protein OsJ_15542 [Oryza sativa Japonica Group] gi|215686902|dbj|BAG89752.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 55/85 (64%), Positives = 68/85 (80%), Gaps = 13/85 (15%)

Query: 53  VRACFSSPIDEPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEEEI 112
           VRACF+ P DE IL+EALKEPVAF+GG+FAGLLRLDLN+DPLK+W+TRTVEA+G+     
Sbjct: 49  VRACFNPPGDERILREALKEPVAFMGGVFAGLLRLDLNEDPLKEWITRTVEASGV----- 103

Query: 113 KAEDSKSDE-------EVPEQIEIE 130
            AEDS++DE       + P+QIEIE
Sbjct: 104 -AEDSRTDESSEGSQNDAPQQIEIE 127

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439251|ref|XP_004137400.1| PREDICTED: UPF0426 protein At1g28150, chloroplastic-like [Cucumis sativus] gi|449507137|ref|XP_004162943.1| PREDICTED: UPF0426 protein At1g28150, chloroplastic-like [Cucumis sativus]

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 56/94 (59%), Positives = 72/94 (76%), Gaps = 4/94 (4%)

Query: 37  SSSLRLRSNNYRNKNGVRACFSSPIDEPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKD 96
           SS  RL SNN  + NG+ A F +P+ +P+LKEALKEPVAF GG+FAGLLRLDLN+DPLK+
Sbjct: 39  SSFFRLGSNN--STNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKE 96

Query: 97  WVTRTVEAAGITEEEIKAEDSKSDEEVPEQIEIE 130
           WV +TVE+AG+  EE+  + S   E+ P +IEIE
Sbjct: 97  WVKKTVESAGL-REEVDTQGS-VQEDGPTEIEIE 128

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	130
TAIR|locus:2010514	123	AT1G28150 "AT1G28150" [Arabido	0.576	0.609	0.727	5.9e-25

TAIR|locus:2010514 AT1G28150 "AT1G28150" [Arabidopsis thaliana (taxid:3702)]

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 56/77 (72%), Positives = 67/77 (87%)

Query:    55 ACFSSPIDEPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEEEIKA 114
             +CF+ P  EPIL EALKEP+AF+GGMFAGLLRLDLN++PLKDWVTRTVEA+GITEEE+ A
Sbjct:    48 SCFNLP-QEPILSEALKEPIAFLGGMFAGLLRLDLNEEPLKDWVTRTVEASGITEEEVDA 106

Query:   115 EDSKS-DEEVPEQIEIE 130
             +   S DE+ P+QIEIE
Sbjct:   107 DGVVSNDEDSPQQIEIE 123


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.132   0.374    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      130        95   0.00091  102 3  11 23  0.44    30
                                                     29  0.43    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  526 (56 KB)
  Total size of DFA:  103 KB (2072 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.02u 0.18s 12.20t   Elapsed:  00:00:01
  Total cpu time:  12.02u 0.18s 12.20t   Elapsed:  00:00:01
  Start:  Fri May 10 08:45:18 2013   End:  Fri May 10 08:45:19 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0010287 "plastoglobule" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FZ89	Y1815_ARATH	No assigned EC number	0.7272	0.5769	0.6097	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00