Citrus Sinensis ID: 032986
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 129 | ||||||
| 284433790 | 129 | hypothetical protein [Jatropha curcas] | 1.0 | 1.0 | 0.899 | 6e-62 | |
| 224063409 | 129 | predicted protein [Populus trichocarpa] | 1.0 | 1.0 | 0.891 | 2e-61 | |
| 449502825 | 129 | PREDICTED: ergosterol biosynthetic prote | 1.0 | 1.0 | 0.883 | 8e-61 | |
| 449436908 | 129 | PREDICTED: ergosterol biosynthetic prote | 1.0 | 1.0 | 0.875 | 6e-59 | |
| 351724767 | 129 | uncharacterized protein LOC100499807 [Gl | 1.0 | 1.0 | 0.868 | 6e-59 | |
| 351722967 | 129 | uncharacterized protein LOC100305859 [Gl | 1.0 | 1.0 | 0.868 | 2e-58 | |
| 225458948 | 131 | PREDICTED: ergosterol biosynthetic prote | 1.0 | 0.984 | 0.862 | 2e-57 | |
| 357466749 | 133 | Ergosterol biosynthetic protein [Medicag | 1.0 | 0.969 | 0.837 | 1e-56 | |
| 297843810 | 129 | hypothetical protein ARALYDRAFT_471114 [ | 0.984 | 0.984 | 0.842 | 1e-56 | |
| 18391101 | 129 | Ergosterol biosynthetic protein 28 [Arab | 1.0 | 1.0 | 0.829 | 1e-56 |
| >gi|284433790|gb|ADB85101.1| hypothetical protein [Jatropha curcas] | Back alignment and taxonomy information |
|---|
Score = 241 bits (615), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 116/129 (89%), Positives = 124/129 (96%)
Query: 1 MKALGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGIWTLLTCTLCFL 60
MKALGWWLMLVGSLRLASVWFGFFDIWALRLAVFS+TTMTEVHGRTFG+WTLLTCTLCFL
Sbjct: 1 MKALGWWLMLVGSLRLASVWFGFFDIWALRLAVFSSTTMTEVHGRTFGVWTLLTCTLCFL 60
Query: 61 CAFNLENRPLYWATFLSFIYAFGHFLTEYLIYQTMAIGNLTTVGIFAGTSIIWMLLQWNA 120
CAFNL+N+PLY ATFLSF+YAFGHFLTEYLIYQTMAIGNLTTVGIFAGTSI+WML+QWNA
Sbjct: 61 CAFNLDNKPLYLATFLSFVYAFGHFLTEYLIYQTMAIGNLTTVGIFAGTSIVWMLIQWNA 120
Query: 121 RQQVHPKDS 129
Q+ H K S
Sbjct: 121 HQKSHTKHS 129
|
Source: Jatropha curcas Species: Jatropha curcas Genus: Jatropha Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224063409|ref|XP_002301132.1| predicted protein [Populus trichocarpa] gi|118481413|gb|ABK92649.1| unknown [Populus trichocarpa] gi|222842858|gb|EEE80405.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449502825|ref|XP_004161753.1| PREDICTED: ergosterol biosynthetic protein 28-like isoform 2 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449436908|ref|XP_004136234.1| PREDICTED: ergosterol biosynthetic protein 28-like isoform 2 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|351724767|ref|NP_001236301.1| uncharacterized protein LOC100499807 [Glycine max] gi|255626787|gb|ACU13738.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|351722967|ref|NP_001237774.1| uncharacterized protein LOC100305859 [Glycine max] gi|255626803|gb|ACU13746.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|225458948|ref|XP_002285532.1| PREDICTED: ergosterol biosynthetic protein 28 [Vitis vinifera] gi|302142135|emb|CBI19338.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|357466749|ref|XP_003603659.1| Ergosterol biosynthetic protein [Medicago truncatula] gi|355492707|gb|AES73910.1| Ergosterol biosynthetic protein [Medicago truncatula] gi|388499144|gb|AFK37638.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|297843810|ref|XP_002889786.1| hypothetical protein ARALYDRAFT_471114 [Arabidopsis lyrata subsp. lyrata] gi|297335628|gb|EFH66045.1| hypothetical protein ARALYDRAFT_471114 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|18391101|ref|NP_563858.1| Ergosterol biosynthetic protein 28 [Arabidopsis thaliana] gi|152112226|sp|O80594.2|ERG28_ARATH RecName: Full=Ergosterol biosynthetic protein 28 gi|31711712|gb|AAP68212.1| At1g10030 [Arabidopsis thaliana] gi|110743771|dbj|BAE99721.1| hypothetical protein [Arabidopsis thaliana] gi|332190409|gb|AEE28530.1| Ergosterol biosynthetic protein 28 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 129 | ||||||
| TAIR|locus:2201891 | 129 | ERG28 "homolog of yeast ergost | 0.984 | 0.984 | 0.748 | 1.2e-49 | |
| DICTYBASE|DDB_G0290393 | 123 | DDB_G0290393 "erg28 family pro | 0.914 | 0.959 | 0.373 | 3.3e-15 | |
| UNIPROTKB|Q9UKR5 | 140 | C14orf1 "Probable ergosterol b | 0.891 | 0.821 | 0.3 | 5.9e-09 | |
| UNIPROTKB|E2QRV3 | 140 | C14orf1 "Uncharacterized prote | 0.891 | 0.821 | 0.291 | 2e-08 | |
| UNIPROTKB|F6V5W3 | 158 | C14orf1 "Uncharacterized prote | 0.891 | 0.727 | 0.291 | 2e-08 | |
| MGI|MGI:1915571 | 140 | 0610007P14Rik "RIKEN cDNA 0610 | 0.891 | 0.821 | 0.283 | 2e-08 | |
| RGD|1310769 | 140 | RGD1310769 "similar to HSPC288 | 0.891 | 0.821 | 0.283 | 2e-08 | |
| UNIPROTKB|G4N4E6 | 186 | MGG_05097 "Transmembrane domai | 0.651 | 0.451 | 0.329 | 3.3e-08 | |
| CGD|CAL0004337 | 138 | orf19.2016 [Candida albicans ( | 0.883 | 0.826 | 0.267 | 4.2e-08 | |
| DICTYBASE|DDB_G0276225 | 123 | DDB_G0276225 "erg28 family pro | 0.906 | 0.951 | 0.258 | 1.1e-07 |
| TAIR|locus:2201891 ERG28 "homolog of yeast ergosterol28" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 95/127 (74%), Positives = 106/127 (83%)
Query: 1 MKALGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGIWXXXXXXXXXX 60
MKALG+WLM+VGSLRLASVWFGFF+IWALRLAVFS TTM+EVHGRTFG+W
Sbjct: 1 MKALGYWLMVVGSLRLASVWFGFFNIWALRLAVFSQTTMSEVHGRTFGVWTLLTCTLCFL 60
Query: 61 XAFNLENRPLYWATFLSFIYAFGHFLTEYLIYQTMAIGNLTTVGIFAGTSIIWMLLQWNA 120
AFNLEN+PLY ATFLSFIYA GHFLTEYL YQTM I NL+TVG FAGTSI+WMLL+WN+
Sbjct: 61 CAFNLENKPLYLATFLSFIYALGHFLTEYLFYQTMTIANLSTVGFFAGTSIVWMLLEWNS 120
Query: 121 RQQVHPK 127
+Q H K
Sbjct: 121 LEQPHSK 127
|
|
| DICTYBASE|DDB_G0290393 DDB_G0290393 "erg28 family protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9UKR5 C14orf1 "Probable ergosterol biosynthetic protein 28" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2QRV3 C14orf1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F6V5W3 C14orf1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1915571 0610007P14Rik "RIKEN cDNA 0610007P14 gene" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|1310769 RGD1310769 "similar to HSPC288" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G4N4E6 MGG_05097 "Transmembrane domain-containing protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
| CGD|CAL0004337 orf19.2016 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0276225 DDB_G0276225 "erg28 family protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| estExt_fgenesh4_pm.C_LG_II0511 | SubName- Full=Putative uncharacterized protein; (129 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 129 | |||
| pfam03694 | 111 | pfam03694, Erg28, Erg28 like protein | 3e-30 |
| >gnl|CDD|190715 pfam03694, Erg28, Erg28 like protein | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 3e-30
Identities = 35/101 (34%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 1 MKALGWWLMLVGSLRLASVWFGFFDIWALRLAVFSN--TTMTEVHGRTFGIWTLLTCTLC 58
M L +WL+ V + L + + ++ L V+S +T + RTFG WTLL+ +
Sbjct: 1 MGLLPYWLLFVSVVSLFNSVQAYINLH-LTRRVYSGKPKEVTPLSARTFGTWTLLSAVIR 59
Query: 59 FLCAFNLENRPLYWATFLSFIYAFGHFLTEYLIYQTMAIGN 99
F CA+N+ N+ LY+ TF +F+ A GHF++E+L ++T +
Sbjct: 60 FYCAYNITNKALYFLTFWTFVIALGHFVSEWLYFKTATLKG 100
|
This is a family of integral membrane proteins, which may contain four transmembrane helices. Members of this family are thought to be involved in sterol C-4 demethylation. In S. cerevisiae they may tether Erg26p (sterol dehydrogenase/decarboxylase) and Erg27p (3-ketoreductase) to the endoplasmic reticulum or may facilitate interaction between these proteins. The family contains a conserved arginine and histidine that may be functionally important. Length = 111 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 129 | |||
| PF03694 | 111 | Erg28: Erg28 like protein; InterPro: IPR005352 Thi | 100.0 | |
| KOG3455 | 139 | consensus Predicted membrane protein [Function unk | 100.0 | |
| PF14936 | 179 | p53-inducible11: Tumour protein p53-inducible prot | 89.27 |
| >PF03694 Erg28: Erg28 like protein; InterPro: IPR005352 This is a family of integral membrane proteins, which may contain four transmembrane helices | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-52 Score=303.84 Aligned_cols=108 Identities=38% Similarity=0.717 Sum_probs=105.0
Q ss_pred ChhhHHHHHHHHHHHHhhhhhhhccchhHHhhhcC--CCCCCchhhhHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHH
Q 032986 1 MKALGWWLMLVGSLRLASVWFGFFDIWALRLAVFS--NTTMTEVHGRTFGIWTLLTCTLCFLCAFNLENRPLYWATFLSF 78 (129)
Q Consensus 1 m~~Lp~WLlfVs~~~~~ns~q~y~~~~~l~~~vYs--~~~vtpL~aRtFg~WTl~s~iir~y~Ay~i~n~~lY~lt~~Tf 78 (129)
|++||+||+|||++|++|++|+|++ .++++|+|+ ++|||||+||+||+||++||+||+||||||+||++|++|+|||
T Consensus 1 ~g~Lp~WLlfVs~~~~~ns~q~y~~-~~~~~~vY~~~~~~vt~L~aRtFG~WTl~s~~ir~~~Ay~i~n~~lY~lt~~Sf 79 (111)
T PF03694_consen 1 MGYLPYWLLFVSVVSLFNSLQCYFS-LSLTRRVYSGKPKQVTPLSARTFGTWTLLSAIIRLYCAYNIHNKPLYDLTFWSF 79 (111)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhC-hHHHhhccCCCCCCCCchhhhhhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 8999999999999999999999999 499999999 4799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccC-ccccchhhhhh
Q 032986 79 IYAFGHFLTEYLIYQTMAIG-NLTTVGIFAGT 109 (129)
Q Consensus 79 viAl~HF~sE~lvfkT~~~~-~~~~P~~va~~ 109 (129)
+||++||++|++||||++++ +.++|++||++
T Consensus 80 viAl~HF~sE~lvfkT~~~~~~~~~P~ivast 111 (111)
T PF03694_consen 80 VIALGHFLSEWLVFKTAKLKGGVIFPLIVAST 111 (111)
T ss_pred HHHHHHHHHHHHHhcccccCCCceeeEEEecC
Confidence 99999999999999999999 79999999985
|
Members of this family are thought to be involved in sterol C-4 demethylation. In Saccharomyces cerevisiae (Baker's yeast) they may tether Erg26p (sterol dehydrogenase/decarboxylase) and Erg27p (3-ketoreductase) to the endoplasmic reticulum or may facilitate interaction between these proteins []. The family contains a conserved arginine and histidine that may be functionally important.; GO: 0016021 integral to membrane |
| >KOG3455 consensus Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >PF14936 p53-inducible11: Tumour protein p53-inducible protein 11 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00