Citrus Sinensis ID: 032997

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------13
Protein Sequence
MNTDITASEKPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHYLSHRVWIFNFINIDAGIKPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYQKRGFSS
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccEEccccccHHHHccccHHHHHHHHHHHHHHccHHHHcccccccccHHHHHHHHHcccccHccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccccc
Coil and Loop (DISEMBL)
mntditasekpqypvidrnppftavvgnfntldylrfSSITGVSVVVGYLSGIIPLHLHYLSHRVWIFNfinidagikpglkgpsmvtgGLIGLMGGFMYAYQNSagrlmgffpnegevaRYQKRGFSS
Flexible Loop (DISEMBL)
mntditasekpqypvidrnppFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHYLSHRVWIFNFINIDAGIKPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYQKRGFSS
Low Complexity Region (SEG)
MNTDITASEKPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHYLSHRVWIFNFINIDAGIKPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYQKRGFSS
Disordered region (IsUnstruct)
**************VIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHYLSHRVWIFNFINIDAGIKPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN**************
Disordered Region (DISOPRED)
********EKPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHYLSHRVWIFNFINIDAGIKPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVA*********
Disordered Region (DISEMBL)
*********KPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHYLSHRVWIFNFINIDAGIKPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYQKRGFSS
Disordered Region (DISPRO)
****ITASEKPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHYLSHRVWIFNFINIDAGIKPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYQKR****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNTDITASEKPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHYLSHRVWIFNFINIDAGIKPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYQKRGFSS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	129
224089721	105	predicted protein [Populus trichocarpa]	0.813	1.0	0.736	2e-44
297804546	106	hypothetical protein ARALYDRAFT_915104 [	0.790	0.962	0.722	2e-42
224137260	105	predicted protein [Populus trichocarpa]	0.806	0.990	0.726	2e-42
315937234	102	hypothetical protein [Jatropha curcas]	0.790	1.0	0.722	6e-42
21553735	106	unknown [Arabidopsis thaliana]	0.790	0.962	0.714	7e-42
186511907	106	uncharacterized protein [Arabidopsis tha	0.790	0.962	0.714	8e-42
2245001	106	hypothetical protein [Arabidopsis thalia	0.790	0.962	0.714	1e-41
351720975	101	uncharacterized protein LOC100306111 [Gl	0.782	1.0	0.704	8e-41
388513791	101	unknown [Lotus japonicus]	0.782	1.0	0.704	1e-40
147799661	116	hypothetical protein VITISV_010564 [Viti	0.775	0.862	0.701	2e-40

>gi|224089721|ref|XP_002308803.1| predicted protein [Populus trichocarpa] gi|118482707|gb|ABK93272.1| unknown [Populus trichocarpa] gi|118483785|gb|ABK93785.1| unknown [Populus trichocarpa] gi|222854779|gb|EEE92326.1| predicted protein [Populus trichocarpa]

 Score =  183 bits (464), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 95/129 (73%), Positives = 99/129 (76%), Gaps = 24/129 (18%)

Query: 1   MNTDITASEKPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHY 60
           MNTDITAS KP+YPVIDRNP FT VVGNFNTLDY RF ++TGVSV VGYLSGI       
Sbjct: 1   MNTDITASAKPEYPVIDRNPEFTKVVGNFNTLDYCRFITLTGVSVTVGYLSGI------- 53

Query: 61  LSHRVWIFNFINIDAGIKPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVA 120
                            KPG+KGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVA
Sbjct: 54  -----------------KPGIKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVA 96

Query: 121 RYQKRGFSS 129
           RYQKRGFSS
Sbjct: 97  RYQKRGFSS 105

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297804546|ref|XP_002870157.1| hypothetical protein ARALYDRAFT_915104 [Arabidopsis lyrata subsp. lyrata] gi|297315993|gb|EFH46416.1| hypothetical protein ARALYDRAFT_915104 [Arabidopsis lyrata subsp. lyrata]

 Score =  177 bits (448), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 91/126 (72%), Positives = 97/126 (76%), Gaps = 24/126 (19%)

Query: 1   MNTDITASEKPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHY 60
           MNTDITA EKPQYPV+DRNP FT VVGNF+TLDYLRFS+ITG+SV VGYLSGI       
Sbjct: 1   MNTDITALEKPQYPVVDRNPAFTKVVGNFSTLDYLRFSTITGISVTVGYLSGI------- 53

Query: 61  LSHRVWIFNFINIDAGIKPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVA 120
                            KPG+KGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVA
Sbjct: 54  -----------------KPGIKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVA 96

Query: 121 RYQKRG 126
            YQKRG
Sbjct: 97  SYQKRG 102

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137260|ref|XP_002322513.1| predicted protein [Populus trichocarpa] gi|222867143|gb|EEF04274.1| predicted protein [Populus trichocarpa]

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/128 (72%), Positives = 96/128 (75%), Gaps = 24/128 (18%)

Query: 1   MNTDITASEKPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHY 60
           MNTDITAS KP+Y VIDRNP FT VVGNFNTLDY RF ++TGVSV VGYLSGI       
Sbjct: 1   MNTDITASAKPEYLVIDRNPAFTKVVGNFNTLDYCRFITLTGVSVTVGYLSGI------- 53

Query: 61  LSHRVWIFNFINIDAGIKPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVA 120
                            KPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVA
Sbjct: 54  -----------------KPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVA 96

Query: 121 RYQKRGFS 128
           RYQKR FS
Sbjct: 97  RYQKRDFS 104

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|315937234|gb|ADU56175.1| hypothetical protein [Jatropha curcas]

 Score =  175 bits (443), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 91/126 (72%), Positives = 96/126 (76%), Gaps = 24/126 (19%)

Query: 1   MNTDITASEKPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHY 60
           MNTDITAS KP+YPVIDRNPPFT VVGNFN LDY RF++ITGVSV VGYL          
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFNFLDYCRFATITGVSVTVGYL---------- 50

Query: 61  LSHRVWIFNFINIDAGIKPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVA 120
                          GIKPG+KGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVA
Sbjct: 51  --------------FGIKPGIKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVA 96

Query: 121 RYQKRG 126
           +YQKRG
Sbjct: 97  QYQKRG 102

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21553735|gb|AAM62828.1| unknown [Arabidopsis thaliana]

 Score =  174 bits (442), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 90/126 (71%), Positives = 96/126 (76%), Gaps = 24/126 (19%)

Query: 1   MNTDITASEKPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHY 60
           MNTDITA EKPQYPV+DRNP FT VVGNF+TLDYLRFS+ITG+SV VGYLSGI       
Sbjct: 1   MNTDITALEKPQYPVVDRNPAFTKVVGNFSTLDYLRFSTITGISVTVGYLSGI------- 53

Query: 61  LSHRVWIFNFINIDAGIKPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVA 120
                            KPG+KGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVA
Sbjct: 54  -----------------KPGIKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVA 96

Query: 121 RYQKRG 126
            Y KRG
Sbjct: 97  SYHKRG 102

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186511907|ref|NP_567500.2| uncharacterized protein [Arabidopsis thaliana] gi|334186608|ref|NP_001190742.1| uncharacterized protein [Arabidopsis thaliana] gi|28416547|gb|AAO42804.1| At4g16450 [Arabidopsis thaliana] gi|110742933|dbj|BAE99362.1| hypothetical protein [Arabidopsis thaliana] gi|332658352|gb|AEE83752.1| uncharacterized protein [Arabidopsis thaliana] gi|332658353|gb|AEE83753.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  174 bits (442), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 90/126 (71%), Positives = 96/126 (76%), Gaps = 24/126 (19%)

Query: 1   MNTDITASEKPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHY 60
           MNTDITA EK QYPV+DRNP FT VVGNF+TLDYLRFS+ITG+SV VGYLSGI       
Sbjct: 1   MNTDITALEKAQYPVVDRNPAFTKVVGNFSTLDYLRFSTITGISVTVGYLSGI------- 53

Query: 61  LSHRVWIFNFINIDAGIKPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVA 120
                            KPG+KGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVA
Sbjct: 54  -----------------KPGIKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVA 96

Query: 121 RYQKRG 126
            YQKRG
Sbjct: 97  SYQKRG 102

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2245001|emb|CAB10421.1| hypothetical protein [Arabidopsis thaliana] gi|7268395|emb|CAB78687.1| hypothetical protein [Arabidopsis thaliana]

 Score =  174 bits (441), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 90/126 (71%), Positives = 95/126 (75%), Gaps = 24/126 (19%)

Query: 1   MNTDITASEKPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHY 60
           MNTDITA EK QYPV+DRNP FT VVGNF TLDYLRFS+ITG+SV VGYLSGI       
Sbjct: 1   MNTDITALEKAQYPVVDRNPAFTKVVGNFRTLDYLRFSTITGISVTVGYLSGI------- 53

Query: 61  LSHRVWIFNFINIDAGIKPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVA 120
                            KPG+KGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVA
Sbjct: 54  -----------------KPGIKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVA 96

Query: 121 RYQKRG 126
            YQKRG
Sbjct: 97  SYQKRG 102

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351720975|ref|NP_001237706.1| uncharacterized protein LOC100306111 [Glycine max] gi|356555750|ref|XP_003546193.1| PREDICTED: uncharacterized protein LOC100819728 [Glycine max] gi|255627585|gb|ACU14137.1| unknown [Glycine max]

 Score =  171 bits (433), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 88/125 (70%), Positives = 95/125 (76%), Gaps = 24/125 (19%)

Query: 1   MNTDITASEKPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHY 60
           MNTDITAS KP+YPVIDRNPPFT VVGNFNTLDYLRF +ITGVSV VGYLS         
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFNTLDYLRFVTITGVSVTVGYLS--------- 51

Query: 61  LSHRVWIFNFINIDAGIKPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVA 120
                          GIKPG++GPSMVTGGLIG+MGGFMYAYQNSAGRLMGFFPN+ EVA
Sbjct: 52  ---------------GIKPGIRGPSMVTGGLIGVMGGFMYAYQNSAGRLMGFFPNDDEVA 96

Query: 121 RYQKR 125
           RY K+
Sbjct: 97  RYNKK 101

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388513791|gb|AFK44957.1| unknown [Lotus japonicus]

 Score =  171 bits (432), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 88/125 (70%), Positives = 95/125 (76%), Gaps = 24/125 (19%)

Query: 1   MNTDITASEKPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHY 60
           MNTDITAS KP+YPVIDRNPPFT VVGNFNTLDYLRF +ITGVSV VGYLS         
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTNVVGNFNTLDYLRFVTITGVSVTVGYLS--------- 51

Query: 61  LSHRVWIFNFINIDAGIKPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVA 120
                          GIKPG++GPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+ EVA
Sbjct: 52  ---------------GIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDDEVA 96

Query: 121 RYQKR 125
           R+ K+
Sbjct: 97  RFNKK 101

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147799661|emb|CAN72866.1| hypothetical protein VITISV_010564 [Vitis vinifera]

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 87/124 (70%), Positives = 93/124 (75%), Gaps = 24/124 (19%)

Query: 1   MNTDITASEKPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHY 60
           MNTDITASEKPQYPVIDRNPP T VVGNF+ LDYLRF +ITGVSV VGYLS         
Sbjct: 17  MNTDITASEKPQYPVIDRNPPLTKVVGNFSALDYLRFVTITGVSVTVGYLS--------- 67

Query: 61  LSHRVWIFNFINIDAGIKPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVA 120
                          GIKP ++GPSMVTGGLIG+MGGFMYAYQNSAGRLMGFFPNE EVA
Sbjct: 68  ---------------GIKPNIRGPSMVTGGLIGIMGGFMYAYQNSAGRLMGFFPNEDEVA 112

Query: 121 RYQK 124
           RY+K
Sbjct: 113 RYKK 116

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	129
TAIR|locus:2130649	106	AT4G16450 "AT4G16450" [Arabido	0.418	0.509	0.909	9.7e-46
CGD|CAL0003931	204	orf19.6607 [Candida albicans (	0.713	0.450	0.296	0.00014
UNIPROTKB|Q59NK8	204	CaO19.6607 "Putative uncharact	0.713	0.450	0.296	0.00014

TAIR|locus:2130649 AT4G16450 "AT4G16450" [Arabidopsis thaliana (taxid:3702)]

 Score = 262 (97.3 bits), Expect = 9.7e-46, Sum P(2) = 9.7e-46
 Identities = 50/55 (90%), Positives = 53/55 (96%)

Query:    75 AGIKPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYQKRG-FS 128
             +GIKPG+KGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVA YQKRG FS
Sbjct:    51 SGIKPGIKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVASYQKRGGFS 105

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0009853 "photorespiration" evidence=RCA;TAS

GO:0031966 "mitochondrial membrane" evidence=IDA

GO:0045271 "respiratory chain complex I" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005747 "mitochondrial respiratory chain complex I" evidence=IDA

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=RCA

GO:0051788 "response to misfolded protein" evidence=RCA

GO:0080129 "proteasome core complex assembly" evidence=RCA

CGD|CAL0003931 orf19.6607 [Candida albicans (taxid:5476)]

 Score = 95 (38.5 bits), Expect = 0.00014, P = 0.00014
 Identities = 32/108 (29%), Positives = 49/108 (45%)

Query:    13 YPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHYLSHRVWIFNFIN 72
             Y +ID +P FT VV  F   DY+ ++ IT             PL +     ++W     +
Sbjct:    19 YELIDGDPYFTRVVSYFRFSDYVNWAVITAS----------FPLGM-----KLWEKIVPS 63

Query:    73 IDAGIKPGLKGP-SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEV 119
                G+KP +  P ++    L+G  GGF   Y  S+ R +G+  N  EV
Sbjct:    64 QGKGLKPSVVNPVTLRVSTLLGFFGGFCLNYVKSSQRFLGWRENSREV 111

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q59NK8 CaO19.6607 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 95 (38.5 bits), Expect = 0.00014, P = 0.00014
 Identities = 32/108 (29%), Positives = 49/108 (45%)

Query:    13 YPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHYLSHRVWIFNFIN 72
             Y +ID +P FT VV  F   DY+ ++ IT             PL +     ++W     +
Sbjct:    19 YELIDGDPYFTRVVSYFRFSDYVNWAVITAS----------FPLGM-----KLWEKIVPS 63

Query:    73 IDAGIKPGLKGP-SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEV 119
                G+KP +  P ++    L+G  GGF   Y  S+ R +G+  N  EV
Sbjct:    64 QGKGLKPSVVNPVTLRVSTLLGFFGGFCLNYVKSSQRFLGWRENSREV 111


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.142   0.437    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      129       129   0.00091  102 3  11 22  0.37    31
                                                     29  0.41    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  544 (58 KB)
  Total size of DFA:  122 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.95u 0.15s 12.10t   Elapsed:  00:00:00
  Total cpu time:  11.95u 0.15s 12.10t   Elapsed:  00:00:00
  Start:  Fri May 10 10:01:09 2013   End:  Fri May 10 10:01:09 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00060155 SubName- Full=Putative uncharacterized protein; (105 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	129
PLN02975	97	PLN02975, PLN02975, complex I subunit	5e-54
pfam10785	84	pfam10785, NADH-u_ox-rdase, NADH-ubiquinone oxidor	4e-24

>gnl|CDD|166616 PLN02975, PLN02975, complex I subunit

 Score =  164 bits (416), Expect = 5e-54
 Identities = 85/121 (70%), Positives = 93/121 (76%), Gaps = 24/121 (19%)

Query: 4   DITASEKPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHYLSH 63
           DITAS+KP+YPV+DRNP FT VVGNF+ LDYLRF++ITGVSV VGYLSGI          
Sbjct: 1   DITASDKPEYPVVDRNPTFTKVVGNFSALDYLRFATITGVSVTVGYLSGI---------- 50

Query: 64  RVWIFNFINIDAGIKPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYQ 123
                         KPG++GPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYQ
Sbjct: 51  --------------KPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYQ 96

Query: 124 K 124
           K
Sbjct: 97  K 97

Length = 97

>gnl|CDD|192666 pfam10785, NADH-u_ox-rdase, NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit

 Score = 88.1 bits (219), Expect = 4e-24
 Identities = 40/106 (37%), Positives = 47/106 (44%), Gaps = 22/106 (20%)

Query: 9   EKPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHYLSHRVWIF 68
             P YPVID +P F  VV  F   DY  ++  T  S + GYL          LS      
Sbjct: 1   LNPPYPVIDSDPHFKRVVRYFRPSDYALWAGATAASPLAGYLME-------RLSP----- 48

Query: 69  NFINIDAGIKPGLKGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFP 114
                       + GPSM   G IG  GGF+ AYQ S+GRLMGF  
Sbjct: 49  ----------SRVGGPSMRLAGAIGFTGGFLLAYQRSSGRLMGFRE 84

This family is the N-terminal domain of NADH-ubiquinone oxidoreductase 21 kDa subunits from fungi, lower metazoa and plants. Length = 84

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	129
PLN02975	97	complex I subunit	100.0
PF10785	86	NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase co	100.0

>PLN02975 complex I subunit

Probab=100.00  E-value=7.7e-50  Score=288.69  Aligned_cols=97  Identities=88%  Similarity=1.471  Sum_probs=93.6

Q ss_pred             ccCCCCCCCCCcccCCCCchhhhcccChhHHHHHHHhhhhhhHHHHHhcccchhhhhhhhhhhhhhhcccccCCCCCCCC
Q 032997            4 DITASEKPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIIPLHLHYLSHRVWIFNFINIDAGIKPGLKG   83 (129)
Q Consensus         4 ~i~~~~~p~YPvID~dP~f~rVv~yfR~SDY~~~a~~ta~~~~~~y~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (129)
                      ||+..++|+|||||+||||+|||+|||+|||++|+++|+++|+++|+.+                        ++|++++
T Consensus         1 ~~~~~~~P~YPlId~dP~f~rVv~yfr~sDY~~~a~~ta~s~~~~~~~~------------------------~~~~~~~   56 (97)
T PLN02975          1 DITASDKPEYPVVDRNPTFTKVVGNFSALDYLRFATITGVSVTVGYLSG------------------------IKPGIRG   56 (97)
T ss_pred             CCcccCCCCCCccCCCCChHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc------------------------cCccccc
Confidence            6899999999999999999999999999999999999999999999977                        6788899


Q ss_pred             chHHHHHHHHHHHHHHHHHhhccccccCcCCCHHHHHHhhh
Q 032997           84 PSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYQK  124 (129)
Q Consensus        84 ~amr~ag~iG~~GGfl~aYqrS~~Rf~G~~EN~rEv~ry~~  124 (129)
                      ++||++|+||++||||+||||||+|||||+||+||||||+|
T Consensus        57 ~~mr~ag~iG~~gGf~~aYq~S~~Rf~G~~EN~rEV~~~~~   97 (97)
T PLN02975         57 PSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYQK   97 (97)
T ss_pred             hHHHHHHHHHHhhhHHhhhcccchhhcCCCCCHHHHHhccC
Confidence            99999999999999999999999999999999999999986

>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi []

Probab=100.00  E-value=3.3e-38  Score=222.32  Aligned_cols=85  Identities=44%  Similarity=0.758  Sum_probs=77.4

Q ss_pred             CCCCCcccCCCCchhhhcccChhHHHHHHHhhhhhhHHHHH-hcccchhhhhhhhhhhhhhhcccccCCCCCCCCchHHH
Q 032997           10 KPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYL-SGIIPLHLHYLSHRVWIFNFINIDAGIKPGLKGPSMVT   88 (129)
Q Consensus        10 ~p~YPvID~dP~f~rVv~yfR~SDY~~~a~~ta~~~~~~y~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amr~   88 (129)
                      +|+|||||+||||+||++|||+|||++|+++|+++|+++|+ +...|++                   +++++ +++|++
T Consensus         1 ~~~YPvId~dP~f~rVv~~~R~sDy~~~a~~ta~~p~~~~~~~~~~~~~-------------------~~~~~-~~~~~~   60 (86)
T PF10785_consen    1 KPPYPVIDSDPHFKRVVRYFRPSDYAIWAGATAASPPLGYYMERSAPSR-------------------VGRGG-GPAMRL   60 (86)
T ss_pred             CCCCCccCCCCCHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcccccc-------------------ccccc-chHHHH
Confidence            58999999999999999999999999999999999999877 5555555                   44444 899999


Q ss_pred             HHHHHHHHHHHHHHhhccccccCcCC
Q 032997           89 GGLIGLMGGFMYAYQNSAGRLMGFFP  114 (129)
Q Consensus        89 ag~iG~~GGfl~aYqrS~~Rf~G~~E  114 (129)
                      +++||++||||+|||||++||+||+|
T Consensus        61 a~~ig~~gGfl~ayqrS~~Rf~G~~e   86 (86)
T PF10785_consen   61 AGAIGFFGGFLLAYQRSSLRFMGFTE   86 (86)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhcCCCC
Confidence            99999999999999999999999998

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00