Citrus Sinensis ID: 033170

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-----
Protein Sequence
MRNSIFSPARARICFLILFMFFSTGYSLRMSSHHYISVSVDENGASRFDDHAAHVNPEPNKGRETEEVGTGVYPTGSSIPDCSHACGPCFPCKRVMVSFKCSVAESCPIVYRCMCRGKYYHVPSN
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccEEEEEEEEEccccccccEEEEEEcccEEEcccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHEHHHHEEEccccccccccccccccccccccccccHHHHHccccccccccccccccEEEccccccccccccccccccccEEEEEEEEcccccccEEEEEEccccEEccccc
Coil and Loop (DISEMBL)
mrnsifspARARICFLILFMFFSTgyslrmssHHYISVsvdengasrfddhaahvnpepnkgreteevgtgvyptgssipdcshacgpcfpckrvmvsfkcsvaescpivyrcmcrgkyyhvpsn
Flexible Loop (DISEMBL)
mrnsifspaRARICFLILFMFFSTGYSLRMSSHHYISVSVDENGASRFDDHAAhvnpepnkgreteeVGTGVYPTGSSIPDCSHACGPCFPCKRVMVSFKCSVAESCPIVYRCMCRGKYYHVPSN
Low Complexity Region (SEG)
MRNSIFSPARARICFLILFMFFSTGYSLRMSSHHYISVSVDENGASRFDDHAAHVNPEPNKGRETEEVGTGVYPTGSSIPDCSHACGPCFPCKRVMVSFKCSVAESCPIVYRCMCRGKYYHVPSN
Disordered region (IsUnstruct)
*******PARARICFLILFMFFSTGYSLRMSSHHYISVSV*******************************VYPTGSSIPDCSHACGPCFPCKRVMVSFKCSVAESCPIVYRCMCRGKYYHV***
Disordered Region (DISOPRED)
******SPARARICFLILFMFFSTGYSL*********************************************P*GSSIPDCSHACGPCFPCKRVMVSFKCSVAESCPIVYRCMCRGKYYH****
Disordered Region (DISEMBL)
MRNSIFSPARARICFLILFMFFSTGYSLRMSSHHYISVSVDENGASRFDDHAAHVNPEPNKGRETEEVGTGVYPTGSSIPDCSHACGPCFPCKRVMVSFKCSVAESCPIVYRCMCRGKYYHVPSN
Disordered Region (DISPRO)
**NSIFSPARARICFLILFMFFSTGYSLRMSSHHYISV********************************G*YPTGSSIPDCSHACGPCFPCKRVMVSFKCSVAESCPIVYRCMCRGKYYHVP**
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRNSIFSPARARICFLILFMFFSTGYSLRMSSHHYISVSVDENGASRFDDHAAHVNPEPNKGRETEEVGTGVYPTGSSIPDCSHACGPCFPCKRVMVSFKCSVAESCPIVYRCMCRGKYYHVPSN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	125	2.2.26 [Sep-21-2011]
Q8LC53	120	Protein EPIDERMAL PATTERN	yes	no	0.664	0.691	0.544	1e-20
C4B8C5	172	EPIDERMAL PATTERNING FACT	no	no	0.4	0.290	0.7	1e-16
Q8S8I4	104	Protein EPIDERMAL PATTERN	no	no	0.416	0.5	0.581	8e-11

>sp|Q8LC53|EPF2_ARATH Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana GN=EPF2 PE=2 SV=1

 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 7/90 (7%)

Query: 37  SVSVDENGASRFDDHAAHVNPE--PNKGRETEEVGTGVYPTGSSIPDCSHACGPCFPCKR 94
           +V+  E   +  +    H   E   N G E E     +YPTGSS+PDCS+ACG C PCKR
Sbjct: 34  TVNGGEKKNADIEQAQTHHKKEISKNGGVEME-----MYPTGSSLPDCSYACGACSPCKR 88

Query: 95  VMVSFKCSVAESCPIVYRCMCRGKYYHVPS 124
           VM+SF+CSVAESC ++YRC CRG+YYHVPS
Sbjct: 89  VMISFECSVAESCSVIYRCTCRGRYYHVPS 118

Controls stomatal patterning. Regulates the number of cells that enter, and remain in, the stomatal lineage by inhibiting protodermal cells from adopting the meristemoid mother cell (MMC) fate in a non-cell-autonomous manner. Mediates stomatal development inhibition.
Arabidopsis thaliana (taxid: 3702)

>sp|C4B8C5|EPFL7_ARATH EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana GN=EPFL7 PE=2 SV=1

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 35/50 (70%), Positives = 45/50 (90%)

Query: 75  TGSSIPDCSHACGPCFPCKRVMVSFKCSVAESCPIVYRCMCRGKYYHVPS 124
           +GSSIPDCS+ACGPC PCK V++S  CS +E+CP+VY+C+C+GKYYHVPS
Sbjct: 121 SGSSIPDCSNACGPCKPCKLVVISSTCSASEACPLVYKCLCKGKYYHVPS 170

Controls stomatal patterning.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8S8I4|EPF1_ARATH Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana GN=EPF1 PE=2 SV=1

 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 3/55 (5%)

Query: 72  VYPTGSSIPDCSHACGPCFPCKRVMVSFKCSV---AESCPIVYRCMCRGKYYHVP 123
           V   GS +PDCSHACG C PC+ VMVSF C+    AE+CP+ Y+CMC  K Y VP
Sbjct: 50  VQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMAYKCMCNNKSYPVP 104

Controls stomatal patterning. Regulates asymmetric cell division during guard cell differentiation. Mediates stomatal development inhibition.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	125
224135443	116	predicted protein [Populus trichocarpa]	0.872	0.939	0.620	5e-31
359493068	180	PREDICTED: uncharacterized protein LOC10	0.736	0.511	0.673	2e-28
359806368	112	uncharacterized protein LOC100800695 [Gl	0.792	0.883	0.570	3e-28
449494102	117	PREDICTED: protein EPIDERMAL PATTERNING	0.88	0.940	0.538	4e-28
296088038	121	unnamed protein product [Vitis vinifera]	0.736	0.760	0.673	1e-27
449446343	117	PREDICTED: protein EPIDERMAL PATTERNING	0.88	0.940	0.529	3e-27
356556993	116	PREDICTED: protein EPIDERMAL PATTERNING	0.84	0.905	0.539	4e-26
255587490	68	conserved hypothetical protein [Ricinus	0.52	0.955	0.833	4e-24
297846416	120	hypothetical protein ARALYDRAFT_891022 [	0.872	0.908	0.454	1e-19
18399188	120	protein EPIDERMAL PATTERNING FACTOR 2 [A	0.664	0.691	0.544	5e-19

>gi|224135443|ref|XP_002327219.1| predicted protein [Populus trichocarpa] gi|222835589|gb|EEE74024.1| predicted protein [Populus trichocarpa]

 Score =  138 bits (347), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 72/116 (62%), Positives = 82/116 (70%), Gaps = 7/116 (6%)

Query: 9   ARARICFLILFMFFSTGYSLRMSSHHYISVSVDENGASRFDDHAAHVNPEPNKGRETEEV 68
           A   +  +++FM F  G SLR   HHY   S  + GAS  D+  AH  P   K    EE+
Sbjct: 7   AHKSLLLMLIFMVFMVGKSLR--PHHYTKSSYSKEGASNGDE--AHDFP---KEAAREEL 59

Query: 69  GTGVYPTGSSIPDCSHACGPCFPCKRVMVSFKCSVAESCPIVYRCMCRGKYYHVPS 124
           G  +YPTGSS+PDCSHACGPC PCKRVMVSFKCSVAESCPIVYRCMC+GKYYHVPS
Sbjct: 60  GMELYPTGSSLPDCSHACGPCTPCKRVMVSFKCSVAESCPIVYRCMCKGKYYHVPS 115

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493068|ref|XP_003634505.1| PREDICTED: uncharacterized protein LOC100854851 [Vitis vinifera]

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 73/98 (74%), Gaps = 6/98 (6%)

Query: 29  RMSSHHYISVSVDENGASRFDDHAAHVNPEPNKGRETEEVGTGVYPTGSSIPD-CSHACG 87
           R + HHY S S   +G    + H +HVNP+     E EE    VYPTGSS+PD CSHACG
Sbjct: 88  RFTHHHYTSSSF--HGKGTHNGHQSHVNPQEG---EKEEGDMRVYPTGSSLPDYCSHACG 142

Query: 88  PCFPCKRVMVSFKCSVAESCPIVYRCMCRGKYYHVPSN 125
           PCFPCKRVMVSFKCSVAESCPIVYRC C+GKYYHVPSN
Sbjct: 143 PCFPCKRVMVSFKCSVAESCPIVYRCTCKGKYYHVPSN 180

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806368|ref|NP_001241233.1| uncharacterized protein LOC100800695 [Glycine max] gi|255633722|gb|ACU17221.1| unknown [Glycine max]

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/114 (57%), Positives = 79/114 (69%), Gaps = 15/114 (13%)

Query: 15  FLILFMFF---STGYSLRMSSHHYISVSVDENGASRFDDHAAHVNPEPNKGRETEEVGTG 71
           FL++ +FF   S G+SLR+  +H    S+ E  A+  D             +E E +G  
Sbjct: 11  FLLIVVFFTVISIGWSLRVIPNHDKLASLQEEKATIRDK------------KEEENMGME 58

Query: 72  VYPTGSSIPDCSHACGPCFPCKRVMVSFKCSVAESCPIVYRCMCRGKYYHVPSN 125
           +YPTGS+IPDCSHACGPC PCKRVMVSFKCS+AESCPIVYRC C+GKYYHVPSN
Sbjct: 59  LYPTGSTIPDCSHACGPCSPCKRVMVSFKCSIAESCPIVYRCTCKGKYYHVPSN 112

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449494102|ref|XP_004159448.1| PREDICTED: protein EPIDERMAL PATTERNING FACTOR 2-like [Cucumis sativus]

 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 63/117 (53%), Positives = 80/117 (68%), Gaps = 7/117 (5%)

Query: 9   ARARICFLILFMFFSTGYSLRMSSHHYISVSVDENGASRFDDHAAHVNPEPNKGRETEEV 68
           A   + F+I F+    G SL  +   ++S + ++    R  +H+ H      + +  E +
Sbjct: 8   AHISLLFVIFFIILMIGSSLDATRWDHMSFNAEDT--HRTINHSRH-----QQEKTKEVL 60

Query: 69  GTGVYPTGSSIPDCSHACGPCFPCKRVMVSFKCSVAESCPIVYRCMCRGKYYHVPSN 125
           G  +YPTGSS+PDCSHACGPCFPCKRVMVSFKCSVAESCP VYRCMC+GKYYHVPSN
Sbjct: 61  GMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYRCMCKGKYYHVPSN 117

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088038|emb|CBI35321.3| unnamed protein product [Vitis vinifera]

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 73/98 (74%), Gaps = 6/98 (6%)

Query: 29  RMSSHHYISVSVDENGASRFDDHAAHVNPEPNKGRETEEVGTGVYPTGSSIPD-CSHACG 87
           R + HHY S S   +G    + H +HVNP+     E EE    VYPTGSS+PD CSHACG
Sbjct: 29  RFTHHHYTSSSF--HGKGTHNGHQSHVNPQEG---EKEEGDMRVYPTGSSLPDYCSHACG 83

Query: 88  PCFPCKRVMVSFKCSVAESCPIVYRCMCRGKYYHVPSN 125
           PCFPCKRVMVSFKCSVAESCPIVYRC C+GKYYHVPSN
Sbjct: 84  PCFPCKRVMVSFKCSVAESCPIVYRCTCKGKYYHVPSN 121

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446343|ref|XP_004140931.1| PREDICTED: protein EPIDERMAL PATTERNING FACTOR 2-like [Cucumis sativus]

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 62/117 (52%), Positives = 79/117 (67%), Gaps = 7/117 (5%)

Query: 9   ARARICFLILFMFFSTGYSLRMSSHHYISVSVDENGASRFDDHAAHVNPEPNKGRETEEV 68
           A   + F+I F+    G SL  +   ++S + ++    R  +H+ H      + +  E +
Sbjct: 8   AHISLLFVIFFIILMIGSSLDATRWDHMSFNAEDT--HRTINHSRH-----QQEKTKEVL 60

Query: 69  GTGVYPTGSSIPDCSHACGPCFPCKRVMVSFKCSVAESCPIVYRCMCRGKYYHVPSN 125
           G  +YPTGSS+PDCSHACGPCFPCKRVMVSFKCSVAESCP VYRCMC+GKYY VPSN
Sbjct: 61  GMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYRCMCKGKYYRVPSN 117

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556993|ref|XP_003546803.1| PREDICTED: protein EPIDERMAL PATTERNING FACTOR 2-like [Glycine max]

 Score =  122 bits (305), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/113 (53%), Positives = 74/113 (65%), Gaps = 8/113 (7%)

Query: 13  ICFLILFMFFSTGYSLRMSSHHYISVSVDENGASRFDDHAAHVNPEPNKGRETEEVGTGV 72
           +  ++ FM  S  +SLR+  +H   ++  +       D    V  E N G E       +
Sbjct: 12  LLIVVFFMVVSISWSLRVIPNHGNKLASLQKEKPTIRDKKEEVK-EDNMGME-------L 63

Query: 73  YPTGSSIPDCSHACGPCFPCKRVMVSFKCSVAESCPIVYRCMCRGKYYHVPSN 125
           YPTGS+IPDCSHACGPC PCKRVMVSFKCS+AESCPIVYRC C+GKYYHVPSN
Sbjct: 64  YPTGSTIPDCSHACGPCSPCKRVMVSFKCSIAESCPIVYRCTCKGKYYHVPSN 116

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255587490|ref|XP_002534291.1| conserved hypothetical protein [Ricinus communis] gi|223525569|gb|EEF28094.1| conserved hypothetical protein [Ricinus communis]

 Score =  115 bits (288), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 55/66 (83%), Positives = 59/66 (89%), Gaps = 1/66 (1%)

Query: 60  NKGRETEEVGTGVYPTGSSIPDCSHACGPCFPCKRVMVSFKC-SVAESCPIVYRCMCRGK 118
            +G   EEVGT +YPTGSS+PDCSHACGPCFPCKRVMVSFKC SV ESCPIVYRCMC+GK
Sbjct: 2   EEGAREEEVGTELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSSVGESCPIVYRCMCKGK 61

Query: 119 YYHVPS 124
           YYHVPS
Sbjct: 62  YYHVPS 67

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297846416|ref|XP_002891089.1| hypothetical protein ARALYDRAFT_891022 [Arabidopsis lyrata subsp. lyrata] gi|297336931|gb|EFH67348.1| hypothetical protein ARALYDRAFT_891022 [Arabidopsis lyrata subsp. lyrata]

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 69/110 (62%), Gaps = 1/110 (0%)

Query: 15  FLILFMFFSTGYSLRMSSHHYISVSVDENGASRFDDHAAHVNPEPNKGRETEEVGTGVYP 74
           F I+ +F +    +       + ++V+       D   A  + E   G++   V   +YP
Sbjct: 10  FCIVLVFAACSLVVNSIRTPPLKITVNGGEKKNSDMEQAQRHHEKEIGKKGG-VEMEMYP 68

Query: 75  TGSSIPDCSHACGPCFPCKRVMVSFKCSVAESCPIVYRCMCRGKYYHVPS 124
           TGSS+PDCS+ACG C PCKRVM+SF+CSVAESC ++YRC CRG+YYHVPS
Sbjct: 69  TGSSLPDCSYACGACSPCKRVMISFQCSVAESCSVIYRCTCRGRYYHVPS 118

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18399188|ref|NP_564442.1| protein EPIDERMAL PATTERNING FACTOR 2 [Arabidopsis thaliana] gi|75155138|sp|Q8LC53.1|EPF2_ARATH RecName: Full=Protein EPIDERMAL PATTERNING FACTOR 2; Flags: Precursor gi|21555357|gb|AAM63840.1| unknown [Arabidopsis thaliana] gi|237512857|dbj|BAH58781.1| EPF2 [Arabidopsis thaliana] gi|332193568|gb|AEE31689.1| protein EPIDERMAL PATTERNING FACTOR 2 [Arabidopsis thaliana]

 Score = 98.2 bits (243), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 7/90 (7%)

Query: 37  SVSVDENGASRFDDHAAHVNPE--PNKGRETEEVGTGVYPTGSSIPDCSHACGPCFPCKR 94
           +V+  E   +  +    H   E   N G E E     +YPTGSS+PDCS+ACG C PCKR
Sbjct: 34  TVNGGEKKNADIEQAQTHHKKEISKNGGVEME-----MYPTGSSLPDCSYACGACSPCKR 88

Query: 95  VMVSFKCSVAESCPIVYRCMCRGKYYHVPS 124
           VM+SF+CSVAESC ++YRC CRG+YYHVPS
Sbjct: 89  VMISFECSVAESCSVIYRCTCRGRYYHVPS 118

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	125
TAIR|locus:505006168	120	EPF2 "AT1G34245" [Arabidopsis	0.424	0.441	0.773	1.6e-22
TAIR|locus:3436392	104	EPF1 "AT2G20875" [Arabidopsis	0.416	0.5	0.618	3e-14
TAIR|locus:2065719	230	CHAL "AT2G30370" [Arabidopsis	0.36	0.195	0.458	0.00019
TAIR|locus:1009023326	109	CLL2 "AT4G14723" [Arabidopsis	0.36	0.412	0.395	0.00035

TAIR|locus:505006168 EPF2 "AT1G34245" [Arabidopsis thaliana (taxid:3702)]

 Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 41/53 (77%), Positives = 49/53 (92%)

Query:    72 VYPTGSSIPDCSHACGPCFPCKRVMVSFKCSVAESCPIVYRCMCRGKYYHVPS 124
             +YPTGSS+PDCS+ACG C PCKRVM+SF+CSVAESC ++YRC CRG+YYHVPS
Sbjct:    66 MYPTGSSLPDCSYACGACSPCKRVMISFECSVAESCSVIYRCTCRGRYYHVPS 118

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0010052 "guard cell differentiation" evidence=IMP

GO:0010374 "stomatal complex development" evidence=IMP

GO:0048730 "epidermis morphogenesis" evidence=IMP

GO:2000122 "negative regulation of stomatal complex development" evidence=IMP

TAIR|locus:3436392 EPF1 "AT2G20875" [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 34/55 (61%), Positives = 39/55 (70%)

Query:    72 VYPTGSSIPDCSHACGPCFPCKRVMVSFKC-SV--AESCPIVYRCMCRGKYYHVP 123
             V   GS +PDCSHACG C PC+ VMVSF C SV  AE+CP+ Y+CMC  K Y VP
Sbjct:    50 VQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMAYKCMCNNKSYPVP 104

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0010375 "stomatal complex patterning" evidence=IMP

GO:0010374 "stomatal complex development" evidence=IGI

GO:2000122 "negative regulation of stomatal complex development" evidence=IMP

TAIR|locus:2065719 CHAL "AT2G30370" [Arabidopsis thaliana (taxid:3702)]

 Score = 95 (38.5 bits), Expect = 0.00019, P = 0.00019
 Identities = 22/48 (45%), Positives = 23/48 (47%)

Query:    76 GSSIPDCSHACGPCFPCKRVMVSFKCSV---AESCPIVYRCMCRGKYY 120
             GSS P CS  CG C PCK V V         AE  P  +RC C  K Y
Sbjct:   181 GSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLY 228

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:2000122 "negative regulation of stomatal complex development" evidence=IGI;IMP

TAIR|locus:1009023326 CLL2 "AT4G14723" [Arabidopsis thaliana (taxid:3702)]

 Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
 Identities = 19/48 (39%), Positives = 24/48 (50%)

Query:    76 GSSIPDCSHACGPCFPCKRVMVSFKCSVA---ESCPIVYRCMCRGKYY 120
             GSS P C   CG C PCK V V  +  ++   E  P  +RC C  K +
Sbjct:    60 GSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLF 107


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.137   0.452    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      125       125   0.00091  102 3  11 22  0.46    30
                                                     29  0.39    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  565 (60 KB)
  Total size of DFA:  142 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.53u 0.07s 14.60t   Elapsed:  00:00:03
  Total cpu time:  14.53u 0.07s 14.60t   Elapsed:  00:00:03
  Start:  Fri May 10 16:38:03 2013   End:  Fri May 10 16:38:06 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0010052 "guard cell differentiation" evidence=IMP

GO:0010374 "stomatal complex development" evidence=IMP

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8LC53	EPF2_ARATH	No assigned EC number	0.5444	0.664	0.6916	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	125
PLN03207	113	stomagen; Provisional	97.7

>PLN03207 stomagen; Provisional

Probab=97.70  E-value=6.3e-05  Score=56.26  Aligned_cols=48  Identities=23%  Similarity=0.608  Sum_probs=35.8

Q ss_pred             CCcccCCCCCCCccc-CCCCCCc-cCcceEecccCCCCccccceeeeecC
Q 033170           69 GTGVYPTGSSIPDCS-HACGPCF-PCKRVMVSFKCSVAESCPIVYRCMCR  116 (125)
Q Consensus        69 ~~~~~~iGS~PP~C~-~KC~~C~-PC~aV~Vp~~~s~~eY~P~~WkCkCg  116 (125)
                      ...+..|||+.|.|. |-|.+|. -|.+-|||+.-+.----..-|||-|+
T Consensus        63 ~srr~~igs~aptctynecrgcr~kc~~eqvpv~~~dp~nsayhy~cvch  112 (113)
T PLN03207         63 SSRRLMIGSTAPTCTYNECRGCRYKCRAEQVPVEGNDPINSAYHYKCVCH  112 (113)
T ss_pred             hhhhhhhcCcCCccccccccCccccccceeccccCCCCCccccccccCCC
Confidence            345678999999997 5899997 59999999987522222235788875

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	125
2liy_A	45	Epidermal patterning factor-like protein 9; plant	96.87

>2liy_A Epidermal patterning factor-like protein 9; plant peptide hormone, EPFL family, stomatal density, positi regulator, hormone; NMR {Arabidopsis thaliana}

Probab=96.87  E-value=0.00074  Score=42.70  Aligned_cols=39  Identities=31%  Similarity=0.809  Sum_probs=32.2

Q ss_pred             CCCCCCccc-CCCCCCc-cCcceEecccCC---CCccccceeeeecC
Q 033170           75 TGSSIPDCS-HACGPCF-PCKRVMVSFKCS---VAESCPIVYRCMCR  116 (125)
Q Consensus        75 iGS~PP~C~-~KC~~C~-PC~aV~Vp~~~s---~~eY~P~~WkCkCg  116 (125)
                      |||+.|.|. |-|.+|. -|.+-|||+.-.   .+-|   -|||.|+
T Consensus         1 igS~APtCTYNECrgCr~~C~aeqvPvd~~dP~~SAY---hY~CvCh   44 (45)
T 2liy_A            1 IGSTAPTCTYNECRGCRYKCRAEQVPVEGNDPINSAY---HYRCVCH   44 (45)
T ss_dssp             CCSCTTTTCGGGGTTCCSEEEEEEEESSCSSSCSCCE---EEEEEEE
T ss_pred             CCccCCceeehhhcCcccccceeeccccCCCcccchh---eeEeEec
Confidence            799999997 5899997 499999999874   3444   5899986

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00