Citrus Sinensis ID: 033274

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120---
Protein Sequence
MALKNLFLIILFLITSLVANASAMNKPASYNLKEGLQASGGPGGQFNECLKAYQELNKCLAVIYQFFFTGMTNVGPCCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSYCRAISPAPSPAQA
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHccccccccccccccccHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHcccccccccHHHHHHHHHHHHHHcccEEEEEEcccccccHHHHHHHHHHccccHHHHHHHHcccHHHHHHHcccccccccccccccc
Coil and Loop (DISEMBL)
MALKNLFLIILFLITSLVANasamnkpasynlkeglqasggpggqfNECLKAYQELNKCLAVIYQFFFtgmtnvgpccgaienvtrkcawpstlpwfgytpqqsnILLSYcraispapspaqa
Flexible Loop (DISEMBL)
MALKNLFLIILFLITSLVANASAMNKPASYNLKEGLQASGGPGGQFNECLKAYQELNKCLAVIYQFFFTGMTNVGPCCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSYCRAISPAPSPAQA
Low Complexity Region (SEG)
MALKNlfliilfliTSLVANASAMNKPASYNLKEGLQASGGPGGQFNECLKAYQELNKCLAVIYQFFFTGMTNVGPCCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSYCRAISPAPSPAQA
Disordered region (IsUnstruct)
***KNLFLIILFLITSLVANASA********************GQFNECLKAYQELNKCLAVIYQFFFTGMTNVGPCCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSYCRAI*********
Disordered Region (DISOPRED)
***KNLFLIILFLITSLVAN**************************NECLKAYQELNKCLAVIYQFFFTGMTNVGPCCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSYCR***********
Disordered Region (DISEMBL)
MALKNLFLIILFLITSLVANASAMNKPASYNLKEGLQASGGPGGQFNECLKAYQELNKCLAVIYQFFFTGMTNVGPCCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSYCRAIS********
Disordered Region (DISPRO)
*ALKNLFLIILFLITSLVANASAMN******************GQFNECLKAYQELNKCLAVIYQFFFTGMTNVGPCCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSYCRA**********
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MALKNLFLIILFLITSLVANASAMNKPASYNLKEGLQASGGPGGQFNECLKAYQELNKCLAVIYQFFFTGMTNVGPCCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSYCRAISPAPSPAQA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	123	2.2.26 [Sep-21-2011]
Q9T039	127	Egg cell-secreted protein	yes	no	0.886	0.858	0.357	4e-11
Q9SJ23	125	Egg cell-secreted protein	no	no	0.878	0.864	0.333	2e-08
Q9SJ24	125	Egg cell-secreted protein	no	no	0.569	0.56	0.388	2e-08
Q9SRD8	158	Egg cell-secreted protein	no	no	0.520	0.405	0.363	3e-07
Q9FGG1	155	Egg cell-secreted protein	no	no	0.894	0.709	0.279	0.0001

>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2 SV=1

 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 61/123 (49%), Gaps = 14/123 (11%)

Query: 6   LFLIILFLITSLVANASAMNKPA--SYNLKEGLQASGGPGGQFNECLKAYQELNKCLAVI 63
           LF  +  LI  L    S  + PA  S N+   LQ+ G       EC  A  EL  C   I
Sbjct: 8   LFSTVTLLIILLNTTVSGRDLPAESSTNIAARLQSGG-----LMECWNALYELKSCTNEI 62

Query: 64  YQFFFTGMTNVG-PCCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSYCR-----AISPA 117
             FF  G T +G  CC +++ +T  C WP+ L   G+TP+++N+L  +C+       SPA
Sbjct: 63  VLFFLNGETKLGVSCCESVDIITTNC-WPAMLTSLGFTPEEANVLRGFCQNPNSGDSSPA 121

Query: 118 PSP 120
           PSP
Sbjct: 122 PSP 124

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2 SV=1

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 18/126 (14%)

Query: 6   LFLIILFLITSLVANASAMNKP---ASYNLKEGLQASGGPGGQFNECLKAYQELNKCLAV 62
           LF+ +  L   LV N S+   P    S N+   L      GG   +C  A  EL  C   
Sbjct: 8   LFVTVTLL---LVLNVSSRALPPVADSTNIAARLT-----GGGLMQCWDALYELKSCTNE 59

Query: 63  IYQFFFTGMTNVG-PCCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSYCRA-----ISP 116
           I  FF  G T +G  CC A++ +T  C WP+ L   G+T +++N+L  +C++      SP
Sbjct: 60  IVLFFLNGETKLGYGCCNAVDVITTDC-WPAMLTSLGFTLEETNVLRGFCQSPNSGGSSP 118

Query: 117 APSPAQ 122
           A SP +
Sbjct: 119 ALSPVK 124

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2 SV=1

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 43  GGQFNECLKAYQELNKCLAVIYQFFFTGMTNVG-PCCGAIENVTRKCAWPSTLPWFGYTP 101
           GG   EC  A  EL  C   I  FF  G T +G  CC A+E +T  C WP+ L   G+T 
Sbjct: 40  GGGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDC-WPAMLTSLGFTS 98

Query: 102 QQSNILLSYCRA 113
            ++N+L  +C++
Sbjct: 99  DETNVLRGFCQS 110

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2 SV=1

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)

Query: 49  CLKAYQELNKCLAVIYQFFFTGMTNVGP-CCGAIENVTRKCAWPSTLPWFGYTPQQSNIL 107
           C  +  +L  C   +  FF  G T +GP CC AI  + RKC WP+ +   G+T Q+ ++L
Sbjct: 57  CWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKC-WPTMIGVLGFTAQEGDML 115

Query: 108 LSYCRA 113
             YC  
Sbjct: 116 QGYCDG 121

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2 SV=1

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 51/129 (39%), Gaps = 19/129 (14%)

Query: 7   FLIILFLITSLVANASAMNKPASYNLKEGLQASGGPGGQFNECLKAYQELNKCLAVIYQF 66
           FL++ +LI++      A  +   +  K     SG   G   +C  A  EL  C   I +F
Sbjct: 14  FLMMSYLISTFHVITVAEGRTLQFT-KMATDHSGA--GNLMDCWNAGLELKSCTDEIVKF 70

Query: 67  FFTGMTNVGP---------CCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSYCR----- 112
           F +      P         CCGAI  V + C W       G T  + N L  YC      
Sbjct: 71  FLSQTGTSEPPVKGGIDKDCCGAIGLVVKDC-WSVMFTSLGLTTMEGNNLREYCEFQAEK 129

Query: 113 -AISPAPSP 120
             +SP+P+P
Sbjct: 130 SELSPSPAP 138

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	123
296082551	135	unnamed protein product [Vitis vinifera]	0.845	0.770	0.406	2e-13
359482498	128	PREDICTED: uncharacterized protein LOC10	0.926	0.890	0.416	2e-13
116830619	128	unknown [Arabidopsis thaliana]	0.886	0.851	0.357	1e-09
15235039	127	uncharacterized protein [Arabidopsis tha	0.886	0.858	0.357	2e-09
224060465	146	predicted protein [Populus trichocarpa]	0.804	0.678	0.361	5e-09
297825031	125	hypothetical protein ARALYDRAFT_900605 [	0.642	0.632	0.383	8e-09
297802032	127	hypothetical protein ARALYDRAFT_490711 [	0.821	0.795	0.345	1e-07
147774833	117	hypothetical protein VITISV_016791 [Viti	0.642	0.675	0.382	1e-07
255578398	135	conserved hypothetical protein [Ricinus	0.878	0.8	0.338	3e-07
297825029	125	hypothetical protein ARALYDRAFT_900604 [	0.569	0.56	0.388	5e-07

>gi|296082551|emb|CBI21556.3| unnamed protein product [Vitis vinifera]

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 65/118 (55%), Gaps = 14/118 (11%)

Query: 3   LKNLFLIILFLITSLVANASAMN------KPASYNLKEGLQASGGPGGQFNECLKAYQEL 56
           +KN+FL++   ++ L+ NASA        KPA  +L   L+ SGG      EC  A  EL
Sbjct: 4   IKNVFLLVA--LSWLITNASASRELPMSMKPAELDLVARLETSGG----LVECWNALVEL 57

Query: 57  NKCLAVIYQFFFTGMTNVGP-CCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSYCRA 113
             C   I  FF  G  ++GP CCGAI+ +TR C WP+ L   G+T ++ NIL  YC A
Sbjct: 58  KSCTNEIILFFLNGQADIGPDCCGAIDIITRNC-WPTMLTSLGFTAEEGNILRGYCDA 114

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482498|ref|XP_002274398.2| PREDICTED: uncharacterized protein LOC100260034 [Vitis vinifera] gi|147772490|emb|CAN65099.1| hypothetical protein VITISV_039724 [Vitis vinifera] gi|297743029|emb|CBI35896.3| unnamed protein product [Vitis vinifera]

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 69/125 (55%), Gaps = 11/125 (8%)

Query: 1   MALKNLFLIILFLITSLVANASAMNKPAS---YNLKEGLQASGGPGGQFNECLKAYQELN 57
           MALK LFL++   +T L+ANA+A     +    +L   L+ SGG      EC  A  E+ 
Sbjct: 1   MALKTLFLLVA--LTWLMANAAATRDLPTNPGLDLTTRLETSGG----LVECWNALMEIR 54

Query: 58  KCLAVIYQFFFTGMTNVGP-CCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSYCRAISP 116
           +C   I  FF  G T +GP CC AI  +TR C WP+ L   G+T ++ NIL  YC A S 
Sbjct: 55  QCTNEIILFFLNGQTVLGPECCQAISIITRNC-WPAMLTSLGFTAEEGNILQGYCNASSG 113

Query: 117 APSPA 121
            P+PA
Sbjct: 114 PPTPA 118

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116830619|gb|ABK28267.1| unknown [Arabidopsis thaliana]

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 61/123 (49%), Gaps = 14/123 (11%)

Query: 6   LFLIILFLITSLVANASAMNKPA--SYNLKEGLQASGGPGGQFNECLKAYQELNKCLAVI 63
           LF  +  LI  L    S  + PA  S N+   LQ+ G       EC  A  EL  C   I
Sbjct: 8   LFSTVTLLIILLNTTVSGRDLPAESSTNIAARLQSGG-----LMECWNALYELKSCTNEI 62

Query: 64  YQFFFTGMTNVG-PCCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSYCR-----AISPA 117
             FF  G T +G  CC +++ +T  C WP+ L   G+TP+++N+L  +C+       SPA
Sbjct: 63  VLFFLNGETKLGVSCCESVDIITTNC-WPAMLTSLGFTPEEANVLRGFCQNPNSGDSSPA 121

Query: 118 PSP 120
           PSP
Sbjct: 122 PSP 124

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15235039|ref|NP_195644.1| uncharacterized protein [Arabidopsis thaliana] gi|75213705|sp|Q9T039.1|EC14_ARATH RecName: Full=Egg cell-secreted protein 1.4; Flags: Precursor gi|4914446|emb|CAB43649.1| hypothetical protein [Arabidopsis thaliana] gi|7270918|emb|CAB80597.1| hypothetical protein [Arabidopsis thaliana] gi|91805627|gb|ABE65542.1| hypothetical protein At4g39340 [Arabidopsis thaliana] gi|332661658|gb|AEE87058.1| uncharacterized protein [Arabidopsis thaliana]

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 61/123 (49%), Gaps = 14/123 (11%)

Query: 6   LFLIILFLITSLVANASAMNKPA--SYNLKEGLQASGGPGGQFNECLKAYQELNKCLAVI 63
           LF  +  LI  L    S  + PA  S N+   LQ+ G       EC  A  EL  C   I
Sbjct: 8   LFSTVTLLIILLNTTVSGRDLPAESSTNIAARLQSGG-----LMECWNALYELKSCTNEI 62

Query: 64  YQFFFTGMTNVG-PCCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSYCR-----AISPA 117
             FF  G T +G  CC +++ +T  C WP+ L   G+TP+++N+L  +C+       SPA
Sbjct: 63  VLFFLNGETKLGVSCCESVDIITTNC-WPAMLTSLGFTPEEANVLRGFCQNPNSGDSSPA 121

Query: 118 PSP 120
           PSP
Sbjct: 122 PSP 124

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060465|ref|XP_002300213.1| predicted protein [Populus trichocarpa] gi|222847471|gb|EEE85018.1| predicted protein [Populus trichocarpa]

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 50/105 (47%), Gaps = 6/105 (5%)

Query: 16  SLVANASAMNKPASYNLKEGLQASGGPGGQFNECLKAYQELNKCLAVIYQFFFTGMTNVG 75
           S  A    +NKP   +L   L+  G       EC  A  E+  C   I  FF TG  ++G
Sbjct: 22  STAARDILINKPGFNSLSARLEDEG----SLVECWNALVEIKSCTNEIVLFFMTGQADIG 77

Query: 76  P-CCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSYCRAISPAPS 119
           P CC AI  +T  C WP+     G+T ++ NIL  YC A   +PS
Sbjct: 78  PDCCRAIHTITHNC-WPAMFTSLGFTDEEGNILRGYCDASPNSPS 121

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297825031|ref|XP_002880398.1| hypothetical protein ARALYDRAFT_900605 [Arabidopsis lyrata subsp. lyrata] gi|297326237|gb|EFH56657.1| hypothetical protein ARALYDRAFT_900605 [Arabidopsis lyrata subsp. lyrata]

 Score = 64.3 bits (155), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 7/86 (8%)

Query: 43  GGQFNECLKAYQELNKCLAVIYQFFFTGMTNVGP-CCGAIENVTRKCAWPSTLPWFGYTP 101
           GG   +C  A  EL  C   I  FF  G T +G  CC A++ +T  C WP+ L   G+T 
Sbjct: 40  GGGLMQCWDALYELKSCTNEIVLFFLNGETKLGSGCCNAVDVITTDC-WPAMLTSLGFTS 98

Query: 102 QQSNILLSYCRA-----ISPAPSPAQ 122
           +++N+L  +C++      SPAPSPA+
Sbjct: 99  EETNVLRGFCQSPTSGGSSPAPSPAE 124

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802032|ref|XP_002868900.1| hypothetical protein ARALYDRAFT_490711 [Arabidopsis lyrata subsp. lyrata] gi|297314736|gb|EFH45159.1| hypothetical protein ARALYDRAFT_490711 [Arabidopsis lyrata subsp. lyrata]

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 9/110 (8%)

Query: 6   LFLIILFLITSLVANASAMNKPA--SYNLKEGLQASGGPGGQFNECLKAYQELNKCLAVI 63
           LF  +  LI  L    S  + PA  S N+   LQ+ G       EC     EL  C   I
Sbjct: 8   LFSTVTLLILFLNTTVSGRDLPAESSTNIAARLQSGG-----LMECWNVLYELKSCTNEI 62

Query: 64  YQFFFTGMTNVG-PCCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSYCR 112
             FF  G T +G  CC A++ +T  C WP+ L   G+TP+++N+L  +C+
Sbjct: 63  VLFFLNGETKLGVSCCEAVDIITTNC-WPAMLTSLGFTPEEANVLRGFCQ 111

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147774833|emb|CAN73446.1| hypothetical protein VITISV_016791 [Vitis vinifera]

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 2/81 (2%)

Query: 36  LQASGGPGGQFNECLKAYQELNKCLAVIYQFFFTGMTNVGP-CCGAIENVTRKCAWPSTL 94
           LQA     G+   C  +  EL  C + +  FF  G T++GP CC AI  + ++C WP+ L
Sbjct: 13  LQARLRLEGESPNCWDSLFELQSCTSEVIMFFLNGETHLGPNCCRAIRIIEQQC-WPALL 71

Query: 95  PWFGYTPQQSNILLSYCRAIS 115
              G+TPQ+ +IL  YC A  
Sbjct: 72  TLLGFTPQEEDILRGYCDATD 92

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578398|ref|XP_002530064.1| conserved hypothetical protein [Ricinus communis] gi|223530417|gb|EEF32304.1| conserved hypothetical protein [Ricinus communis]

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 57/121 (47%), Gaps = 13/121 (10%)

Query: 1   MALKNLFLIILFLITSLVANASAMNK---PASYNLKEG----LQASGGPGGQFNECLKAY 53
           MA K + L  L  +T  +A ASA+ +     +Y+  E     L+ S   GG   +C  A 
Sbjct: 1   MAFKVMSL--LLGVTFFIAGASAIREIPIKQAYDNTETRVLLLETSSSSGGGLVDCWNAL 58

Query: 54  QELNKCLAVIYQFFFTGMTNV---GPCCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSY 110
            E+  C   I  FF  G T++     CC AI  +   C WPS L   G+T ++ NIL  Y
Sbjct: 59  MEIKSCSNEIILFFLNGQTDITIGADCCSAISIIAHNC-WPSMLTSLGFTVEEVNILNGY 117

Query: 111 C 111
           C
Sbjct: 118 C 118

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297825029|ref|XP_002880397.1| hypothetical protein ARALYDRAFT_900604 [Arabidopsis lyrata subsp. lyrata] gi|297326236|gb|EFH56656.1| hypothetical protein ARALYDRAFT_900604 [Arabidopsis lyrata subsp. lyrata]

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 43  GGQFNECLKAYQELNKCLAVIYQFFFTGMTNVG-PCCGAIENVTRKCAWPSTLPWFGYTP 101
           GG   EC  A  EL  C   I  FF  G T +G  CC A+E +T  C WP+ L   G+T 
Sbjct: 40  GGGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDC-WPAMLTSLGFTS 98

Query: 102 QQSNILLSYCRA 113
            ++N+L ++C++
Sbjct: 99  DETNVLRAFCQS 110

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	123
TAIR|locus:2136293	127	EC1.4 "AT4G39340" [Arabidopsis	0.796	0.771	0.375	8.2e-12
TAIR|locus:2052536	125	EC1.2 "AT2G21740" [Arabidopsis	0.617	0.608	0.397	7.4e-11
TAIR|locus:2052556	125	EC1.3 "AT2G21750" [Arabidopsis	0.642	0.632	0.360	5.2e-10
TAIR|locus:2030136	158	EC1.1 "AT1G76750" [Arabidopsis	0.504	0.392	0.375	5.9e-09
TAIR|locus:2176080	155	EC1.5 "AT5G64720" [Arabidopsis	0.609	0.483	0.333	8.1e-05
TAIR|locus:504954909	207	AT5G54062 "AT5G54062" [Arabido	0.601	0.357	0.337	0.00025

TAIR|locus:2136293 EC1.4 "AT4G39340" [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 42/112 (37%), Positives = 57/112 (50%)

Query:    17 LVANASAMNKPA--SYNLKEGLQASGGPGGQFNECLKAYQELNKCLAVIYQFFFTGMTNV 74
             L    S  + PA  S N+   LQ SGG      EC  A  EL  C   I  FF  G T +
Sbjct:    19 LNTTVSGRDLPAESSTNIAARLQ-SGG----LMECWNALYELKSCTNEIVLFFLNGETKL 73

Query:    75 G-PCCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSYCRA-----ISPAPSP 120
             G  CC +++ +T  C WP+ L   G+TP+++N+L  +C+       SPAPSP
Sbjct:    74 GVSCCESVDIITTNC-WPAMLTSLGFTPEEANVLRGFCQNPNSGDSSPAPSP 124

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2052536 EC1.2 "AT2G21740" [Arabidopsis thaliana (taxid:3702)]

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 33/83 (39%), Positives = 44/83 (53%)

Query:    43 GGQFNECLKAYQELNKCLAVIYQFFFTGMTNVG-PCCGAIENVTRKCAWPSTLPWFGYTP 101
             GG   EC  A  EL  C   I  FF  G T +G  CC A+E +T  C WP+ L   G+T 
Sbjct:    40 GGGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDC-WPAMLTSLGFTS 98

Query:   102 QQSNILLSYCRA-----ISPAPS 119
              ++N+L  +C++      SPAPS
Sbjct:    99 DETNVLRGFCQSPNSGGSSPAPS 121

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2052556 EC1.3 "AT2G21750" [Arabidopsis thaliana (taxid:3702)]

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 31/86 (36%), Positives = 46/86 (53%)

Query:    43 GGQFNECLKAYQELNKCLAVIYQFFFTGMTNVG-PCCGAIENVTRKCAWPSTLPWFGYTP 101
             GG   +C  A  EL  C   I  FF  G T +G  CC A++ +T  C WP+ L   G+T 
Sbjct:    40 GGGLMQCWDALYELKSCTNEIVLFFLNGETKLGYGCCNAVDVITTDC-WPAMLTSLGFTL 98

Query:   102 QQSNILLSYCRA-----ISPAPSPAQ 122
             +++N+L  +C++      SPA SP +
Sbjct:    99 EETNVLRGFCQSPNSGGSSPALSPVK 124

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2030136 EC1.1 "AT1G76750" [Arabidopsis thaliana (taxid:3702)]

 Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
 Identities = 24/64 (37%), Positives = 35/64 (54%)

Query:    49 CLKAYQELNKCLAVIYQFFFTGMTNVGP-CCGAIENVTRKCAWPSTLPWFGYTPQQSNIL 107
             C  +  +L  C   +  FF  G T +GP CC AI  + RKC WP+ +   G+T Q+ ++L
Sbjct:    57 CWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKC-WPTMIGVLGFTAQEGDML 115

Query:   108 LSYC 111
               YC
Sbjct:   116 QGYC 119

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0005622 "intracellular" evidence=IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0048240 "sperm capacitation" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2176080 EC1.5 "AT5G64720" [Arabidopsis thaliana (taxid:3702)]

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 31/93 (33%), Positives = 39/93 (41%)

Query:    44 GQFNECLKAYQELNKCLAVIYQFFF--TGMTNVGP--------CCGAIENVTRKCAWPST 93
             G   +C  A  EL  C   I +FF   TG T+  P        CCGAI  V + C W   
Sbjct:    48 GNLMDCWNAGLELKSCTDEIVKFFLSQTG-TSEPPVKGGIDKDCCGAIGLVVKDC-WSVM 105

Query:    94 LPWFGYTPQQSNILLSYCR------AISPAPSP 120
                 G T  + N L  YC        +SP+P+P
Sbjct:   106 FTSLGLTTMEGNNLREYCEFQAEKSELSPSPAP 138

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005576 "extracellular region" evidence=IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:504954909 AT5G54062 "AT5G54062" [Arabidopsis thaliana (taxid:3702)]

 Score = 93 (37.8 bits), Expect = 0.00025, P = 0.00025
 Identities = 28/83 (33%), Positives = 39/83 (46%)

Query:    42 PGGQFN--ECLKAYQELNKCLAVIYQFFFTGMT-NVG-PCCGAIENVTRKCAWPSTLPWF 97
             PG   +  +CL +   +  C+  IY+  FTG   NVG  CC A   V  KC WP   P  
Sbjct:   127 PGSPIDLTKCLSSLVNVQGCVTEIYKSVFTGKCDNVGFMCCKAFMAVDAKC-WPKMFPLN 185

Query:    98 GYTPQQSNILLSYCRAISP-APS 119
              + P    +L + C  I+  AP+
Sbjct:   186 PFFPP---LLKNVCSRINTSAPT 205


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.131   0.420    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      123       114   0.00091  102 3  11 22  0.47    30
                                                     29  0.44    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  569 (61 KB)
  Total size of DFA:  127 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.01u 0.15s 12.16t   Elapsed:  00:00:01
  Total cpu time:  12.01u 0.15s 12.16t   Elapsed:  00:00:01
  Start:  Fri May 10 21:20:07 2013   End:  Fri May 10 21:20:08 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9T039	EC14_ARATH	No assigned EC number	0.3577	0.8861	0.8582	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00019340001 SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (135 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	123
pfam05617	67	pfam05617, Prolamin_like, Prolamin-like	4e-06

>gnl|CDD|218659 pfam05617, Prolamin_like, Prolamin-like

 Score = 41.3 bits (97), Expect = 4e-06
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 4/67 (5%)

Query: 48  ECLKAYQE-LNKCLAVIYQFFFTGMTNVGP-CCGAIENVTRKCAWPSTLPWFGYTPQ-QS 104
           +C  A    +  C+  I+   F    N+GP CC AI  +   C WP+    F   P    
Sbjct: 1   KCWSACAVKIPGCVDEIFASIFGNKGNLGPDCCQAILKIGDDC-WPALFKMFPSLPFFPP 59

Query: 105 NILLSYC 111
            +L +YC
Sbjct: 60  KLLKNYC 66

Both DUF784 and DUF1278 members are found to be expressed in the plant embryo sac and are regulated by the Myb98 transcription factor. Computational analysis has revealed that they are homologous to the plant prolamin superfamily (Protease inhibitor-seed storage-LTP family, pfam00234). In contrast to the typical prolamin members that have eight conserved Cys residues forming four pairs of disulfide bonds, both DUF784 and DUF1278 domains only contain six conserved Cys residues that may form three pairs of disulfide bonds. These two domains may have potential functions in lipid transfer or protection during plant embryo sac development and reproduction. This family has been merged with the DUF1278 family. Length = 67

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	123
PLN00213	118	predicted protein; Provisional	99.95
PF05617	70	Prolamin_like: Prolamin-like; InterPro: IPR008502	99.8
PF07172	95	GRP: Glycine rich protein family; InterPro: IPR010	91.91
PLN00214	115	putative protein; Provisional	80.93

>PLN00213 predicted protein; Provisional

Probab=99.95  E-value=1.9e-28  Score=181.92  Aligned_cols=72  Identities=31%  Similarity=0.732  Sum_probs=66.7

Q ss_pred             ChhhhhhhhhcchhhHHHHHHHHHhCcc-cccc-chHHHHHhhhcCCCCCCCCCCCCCCcchhhHHhhhhhcCCCCCCCC
Q 033274           45 QFNECLKAYQELNKCLAVIYQFFFTGMT-NVGP-CCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSYCRAISPAPSPAQ  122 (123)
Q Consensus        45 ~~~~CWssl~~l~~C~~EI~~ffl~G~~-~iGp-CC~Ai~~i~~~C~WP~M~~~~gFtp~e~~~Lkg~C~~~~pAp~pa~  122 (123)
                      |..||||||++++||+.||++++++||+ +||+ |||||++.+ || ||+| +.++|+|   ++||++|+++..+++|.+
T Consensus        44 d~~kCwSSl~~vpGCv~EI~~si~~gkf~~Ig~aCCKAf~~~d-nC-wP~~-P~~P~fP---p~LK~~Cs~i~~~~~~~~  117 (118)
T PLN00213         44 DITKCFSSVMDIPGCIAEISQSIFTGKFGNLGPACCKAFLDAD-NC-IPKI-PFIPFFP---PMLKEQCSRVAGATPPIP  117 (118)
T ss_pred             cHHHHHHHHcCCcchHHHHHHHHHhchhcccchHHHHHHHhhh-cc-ccCC-cCCCccc---hHHHHHHhcccCCCCCCC
Confidence            8999999999999999999999999999 9999 999999977 99 9996 8888887   699999999987777754

>PF05617 Prolamin_like: Prolamin-like; InterPro: IPR008502 This entry consists of several proteins of unknown function found exclusively in Arabidopsis thaliana

Probab=99.80  E-value=1.7e-20  Score=123.27  Aligned_cols=64  Identities=33%  Similarity=0.777  Sum_probs=58.5

Q ss_pred             hhhhhhhcchhhHHHHHHHHHhCc-ccccc-chHHHHHhhhcCCCCCCCCCCCCCCcchh----hHHhhhh
Q 033274           48 ECLKAYQELNKCLAVIYQFFFTGM-TNVGP-CCGAIENVTRKCAWPSTLPWFGYTPQQSN----ILLSYCR  112 (123)
Q Consensus        48 ~CWssl~~l~~C~~EI~~ffl~G~-~~iGp-CC~Ai~~i~~~C~WP~M~~~~gFtp~e~~----~Lkg~C~  112 (123)
                      |||+++.++++|+.||+.+|++|+ .+||+ ||++|+.++++| ||+|+..++++|.+.+    .|+++|+
T Consensus         1 kc~~~~~~~~~C~~eI~~~~~~g~~~~i~~~CC~~i~~~g~~C-~~~l~~~~~~~p~~~~~~r~~l~~~C~   70 (70)
T PF05617_consen    1 KCLSSCAKSPGCGDEIFNSFFNGNKKNIGPECCKAINKMGKDC-HPALFKMFPFTPFFKPLLRDLLWNHCS   70 (70)
T ss_pred             ChHHHcCCccchHHHHHHHHHcCCCCCCChHHHHHHHHHhHhH-HHHHHHHccCCCCccchhHHHHHhhcC
Confidence            699999999999999999999999 59999 999999999999 9996666667777778    9999996

>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins

Probab=91.91  E-value=0.17  Score=36.29  Aligned_cols=23  Identities=35%  Similarity=0.437  Sum_probs=12.5

Q ss_pred             CcchHHHHHHHHH-HHHHHHhhhc
Q 033274            1 MALKNLFLIILFL-ITSLVANASA   23 (123)
Q Consensus         1 Ma~~~~~l~~~~~-~~~l~~~~~a   23 (123)
                      ||||+++|+.++| +.+||++.++
T Consensus         1 MaSK~~llL~l~LA~lLlisSeva   24 (95)
T PF07172_consen    1 MASKAFLLLGLLLAALLLISSEVA   24 (95)
T ss_pred             CchhHHHHHHHHHHHHHHHHhhhh
Confidence            9987755554444 3344444333

Some of them may be involved in resistance to environmental stress [].

>PLN00214 putative protein; Provisional

Probab=80.93  E-value=3.8  Score=30.94  Aligned_cols=39  Identities=31%  Similarity=0.731  Sum_probs=30.7

Q ss_pred             hhhhhhhhcchhhHHHHHHHHH-hCccccccchHHHHHhhhcC
Q 033274           47 NECLKAYQELNKCLAVIYQFFF-TGMTNVGPCCGAIENVTRKC   88 (123)
Q Consensus        47 ~~CWssl~~l~~C~~EI~~ffl-~G~~~iGpCC~Ai~~i~~~C   88 (123)
                      ..|-.-+.  +-|..||+..++ ||.+ ..+||+-|...+.+|
T Consensus        37 ~~C~~Kmt--~KCa~EI~a~i~~N~t~-s~~CC~~LVk~GK~C   76 (115)
T PLN00214         37 NTCLVKIT--PKCALDIIAVVFENGTL-IDPCCNDLVKEGKVC   76 (115)
T ss_pred             HHHHhhcc--HhhHHHHHHHHHcCCCC-chHHHHHHHHHhhHH
Confidence            34555554  679999999999 5544 555999999999999

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00