Citrus Sinensis ID: 033610


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-----
MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKVHTCSSFMNKLCKGVSYLFTV
ccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHcccccHHHHHHHHHHHHHcHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHcccccccccc
ccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccHHHEEEcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccHHHHHcccEEEEEEc
mpkvrtnrtkypdgwelIAPTLREMEAKMReaendphdgkrkcetlWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLdqgygdsnliAKWKKVHTCSSFMNklckgvsylftv
mpkvrtnrtkypdgweliaPTLREMEAKMReaendphdgkrkCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKVHTCSSfmnklckgvsylftv
MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKVHTCSSFMNKLCKGVSYLFTV
**************WELI***********************KCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKVHTCSSFMNKLCKGVSYLF**
************DGWELIAPTLREM********************LWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKVHTCSSFMNKLCKGV******
********TKYPDGWELIAPTLREMEAK***********KRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKVHTCSSFMNKLCKGVSYLFTV
*******RTKYPDGWELIAPTLREMEAKMREAEN***D**RKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKVHTCSSFMNKLCKGVSYLFTV
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
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MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKVHTCSSFMNKLCKGVSYLFTV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query115 2.2.26 [Sep-21-2011]
Q65WT0145 Protein BUD31 homolog 2 O yes no 0.817 0.648 0.787 3e-42
Q94DE2145 Protein BUD31 homolog 1 O no no 0.817 0.648 0.787 9e-42
P35682145 Protein BUD31 homolog 3 O no no 0.817 0.648 0.755 5e-40
O70454144 Protein BUD31 homolog OS= yes no 0.817 0.652 0.659 9e-34
P41223144 Protein BUD31 homolog OS= yes no 0.817 0.652 0.659 9e-34
Q2NKU3144 Protein BUD31 homolog OS= yes no 0.817 0.652 0.659 9e-34
P12805144 Protein BUD31 homolog OS= N/A no 0.817 0.652 0.659 1e-33
Q962X9144 Protein BUD31 homolog OS= N/A no 0.817 0.652 0.670 3e-33
Q567Z7144 Protein BUD31 homolog OS= yes no 0.817 0.652 0.648 5e-33
P34313147 Protein BUD31 homolog OS= yes no 0.8 0.625 0.619 1e-29
>sp|Q65WT0|BD31B_ORYSJ Protein BUD31 homolog 2 OS=Oryza sativa subsp. japonica GN=Os05g0446300 PE=2 SV=1 Back     alignment and function desciption
 Score =  170 bits (430), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 74/94 (78%), Positives = 88/94 (93%)

Query: 1  MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYI 60
          MPK++T+R KYP+GWELI PTLR++EAKMREAENDPHDGKRKCE LWPIF+I+HQ+S+YI
Sbjct: 1  MPKIKTSRVKYPEGWELIEPTLRDLEAKMREAENDPHDGKRKCEALWPIFRISHQKSRYI 60

Query: 61 FELYYKRNEISKELYEFCLDQGYGDSNLIAKWKK 94
          ++LYY+R EISKELYEFCLDQG+ D NLIAKWKK
Sbjct: 61 YDLYYRRKEISKELYEFCLDQGHADKNLIAKWKK 94





Oryza sativa subsp. japonica (taxid: 39947)
>sp|Q94DE2|BD31A_ORYSJ Protein BUD31 homolog 1 OS=Oryza sativa subsp. japonica GN=Os01g0857700 PE=2 SV=1 Back     alignment and function description
>sp|P35682|BD31C_ORYSJ Protein BUD31 homolog 3 OS=Oryza sativa subsp. japonica GN=Os12g0149800 PE=2 SV=2 Back     alignment and function description
>sp|O70454|BUD31_RAT Protein BUD31 homolog OS=Rattus norvegicus GN=Bud31 PE=2 SV=2 Back     alignment and function description
>sp|P41223|BUD31_HUMAN Protein BUD31 homolog OS=Homo sapiens GN=BUD31 PE=1 SV=2 Back     alignment and function description
>sp|Q2NKU3|BUD31_BOVIN Protein BUD31 homolog OS=Bos taurus GN=BUD31 PE=2 SV=1 Back     alignment and function description
>sp|P12805|BUD31_XENLA Protein BUD31 homolog OS=Xenopus laevis GN=bud31 PE=2 SV=1 Back     alignment and function description
>sp|Q962X9|BUD31_BRABE Protein BUD31 homolog OS=Branchiostoma belcheri PE=2 SV=1 Back     alignment and function description
>sp|Q567Z7|BUD31_DANRE Protein BUD31 homolog OS=Danio rerio GN=bud31 PE=2 SV=1 Back     alignment and function description
>sp|P34313|BUD31_CAEEL Protein BUD31 homolog OS=Caenorhabditis elegans GN=C07A9.2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query115
351727539145 uncharacterized protein LOC100305597 [Gl 0.817 0.648 0.851 6e-43
449451114145 PREDICTED: protein BUD31 homolog 2-like 0.817 0.648 0.829 3e-42
357518649145 BUD31-like protein [Medicago truncatula] 0.817 0.648 0.829 3e-42
388490494145 unknown [Lotus japonicus] 0.817 0.648 0.829 5e-42
90399342 784 H0811D08.6 [Oryza sativa Indica Group] 0.817 0.119 0.787 5e-42
255586760145 Protein G10, putative [Ricinus communis] 0.817 0.648 0.829 7e-42
297736877177 unnamed protein product [Vitis vinifera] 0.817 0.531 0.819 9e-42
225432314145 PREDICTED: protein BUD31 homolog 2 [Viti 0.817 0.648 0.819 1e-41
192911938145 G10 protein [Elaeis guineensis] 0.817 0.648 0.819 1e-41
255576371144 Protein G10, putative [Ricinus communis] 0.808 0.645 0.851 2e-41
>gi|351727539|ref|NP_001237676.1| uncharacterized protein LOC100305597 [Glycine max] gi|356512435|ref|XP_003524924.1| PREDICTED: protein BUD31 homolog 2-like [Glycine max] gi|255626029|gb|ACU13359.1| unknown [Glycine max] Back     alignment and taxonomy information
 Score =  177 bits (450), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 80/94 (85%), Positives = 89/94 (94%)

Query: 1  MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYI 60
          MPKV+TNR KYP+GWELI PTLRE++AKMREAENDPHDGKRKCETLWPIFKIAHQ+S+YI
Sbjct: 1  MPKVKTNRVKYPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYI 60

Query: 61 FELYYKRNEISKELYEFCLDQGYGDSNLIAKWKK 94
          F+LY++R EISKELYEFCLDQGY D NLIAKWKK
Sbjct: 61 FDLYHRRKEISKELYEFCLDQGYADRNLIAKWKK 94




Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451114|ref|XP_004143307.1| PREDICTED: protein BUD31 homolog 2-like [Cucumis sativus] gi|449511850|ref|XP_004164071.1| PREDICTED: protein BUD31 homolog 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357518649|ref|XP_003629613.1| BUD31-like protein [Medicago truncatula] gi|355523635|gb|AET04089.1| BUD31-like protein [Medicago truncatula] gi|388508458|gb|AFK42295.1| unknown [Medicago truncatula] gi|388514395|gb|AFK45259.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|388490494|gb|AFK33313.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|90399342|emb|CAJ86113.1| H0811D08.6 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|255586760|ref|XP_002533999.1| Protein G10, putative [Ricinus communis] gi|223526001|gb|EEF28380.1| Protein G10, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297736877|emb|CBI26078.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225432314|ref|XP_002273849.1| PREDICTED: protein BUD31 homolog 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|192911938|gb|ACF06577.1| G10 protein [Elaeis guineensis] Back     alignment and taxonomy information
>gi|255576371|ref|XP_002529078.1| Protein G10, putative [Ricinus communis] gi|223531490|gb|EEF33322.1| Protein G10, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query115
TAIR|locus:2127383145 AT4G21110 [Arabidopsis thalian 0.817 0.648 0.797 1.4e-41
UNIPROTKB|E1BV47144 BUD31 "Uncharacterized protein 0.817 0.652 0.659 1.5e-33
UNIPROTKB|Q2NKU3144 BUD31 "Protein BUD31 homolog" 0.817 0.652 0.659 1.5e-33
UNIPROTKB|E2RMW3144 BUD31 "Uncharacterized protein 0.817 0.652 0.659 1.5e-33
UNIPROTKB|P41223144 BUD31 "Protein BUD31 homolog" 0.817 0.652 0.659 1.5e-33
RGD|621103144 Bud31 "BUD31 homolog (S. cerev 0.817 0.652 0.659 1.5e-33
ZFIN|ZDB-GENE-040720-3144 bud31 "BUD31 homolog (yeast)" 0.817 0.652 0.648 6.7e-33
DICTYBASE|DDB_G0270360 221 bud31 "putative transcription 0.817 0.425 0.627 4.7e-32
FB|FBgn0001491144 l(1)10Bb "lethal (1) 10Bb" [Dr 0.886 0.708 0.594 1.3e-31
WB|WBGene00007400147 C07A9.2 [Caenorhabditis elegan 0.8 0.625 0.619 1.6e-29
TAIR|locus:2127383 AT4G21110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
 Identities = 75/94 (79%), Positives = 87/94 (92%)

Query:     1 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYI 60
             MPKV+TNR KYP+GWELI PTLRE++AKMREAE D HDGKRKCETLWPIFK++HQRS+Y+
Sbjct:     1 MPKVKTNRVKYPEGWELIEPTLRELDAKMREAETDSHDGKRKCETLWPIFKVSHQRSRYV 60

Query:    61 FELYYKRNEISKELYEFCLDQGYGDSNLIAKWKK 94
             ++LYY+R EISKELYEFCLDQGY D +LIAKWKK
Sbjct:    61 YDLYYRREEISKELYEFCLDQGYADRSLIAKWKK 94




GO:0005634 "nucleus" evidence=ISM;IEA;ISS
GO:0008150 "biological_process" evidence=ND
GO:0005829 "cytosol" evidence=IDA
UNIPROTKB|E1BV47 BUD31 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q2NKU3 BUD31 "Protein BUD31 homolog" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RMW3 BUD31 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P41223 BUD31 "Protein BUD31 homolog" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|621103 Bud31 "BUD31 homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040720-3 bud31 "BUD31 homolog (yeast)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0270360 bud31 "putative transcription factor" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
FB|FBgn0001491 l(1)10Bb "lethal (1) 10Bb" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00007400 C07A9.2 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O74772CWF14_SCHPONo assigned EC number0.56840.80860.6369yesno
P41223BUD31_HUMANNo assigned EC number0.65950.81730.6527yesno
Q2NKU3BUD31_BOVINNo assigned EC number0.65950.81730.6527yesno
Q65WT0BD31B_ORYSJNo assigned EC number0.78720.81730.6482yesno
O70454BUD31_RATNo assigned EC number0.65950.81730.6527yesno
Q567Z7BUD31_DANRENo assigned EC number0.64890.81730.6527yesno
P34313BUD31_CAEELNo assigned EC number0.61950.80.6258yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query115
pfam01125145 pfam01125, G10, G10 protein 8e-48
COG5132146 COG5132, BUD31, Cell cycle control protein, G10 fa 2e-34
>gnl|CDD|216312 pfam01125, G10, G10 protein Back     alignment and domain information
 Score =  149 bits (378), Expect = 8e-48
 Identities = 61/95 (64%), Positives = 80/95 (84%), Gaps = 1/95 (1%)

Query: 1  MPKVRTNRTK-YPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQY 59
          MP++RT+RTK  P+G++ I PTL E EAKMR+AEN+PH+GKRK E LWPIF+I HQRS+Y
Sbjct: 1  MPRIRTSRTKKPPEGFDKIEPTLDEFEAKMRDAENEPHEGKRKKELLWPIFRIHHQRSRY 60

Query: 60 IFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKK 94
          +++LYYKR  IS+ELY++ L + Y D+NLIAKWKK
Sbjct: 61 VYDLYYKRKAISRELYDWLLKEKYADANLIAKWKK 95


Length = 145

>gnl|CDD|227461 COG5132, BUD31, Cell cycle control protein, G10 family [Transcription / Cell division and chromosome partitioning] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 115
PF01125145 G10: G10 protein; InterPro: IPR001748 A Xenopus pr 100.0
KOG3404145 consensus G10 protein/predicted nuclear transcript 100.0
COG5132146 BUD31 Cell cycle control protein, G10 family [Tran 100.0
>PF01125 G10: G10 protein; InterPro: IPR001748 A Xenopus protein known as G10 [] has been found to be highly conserved in a wide range of eukaryotic species Back     alignment and domain information
Probab=100.00  E-value=2.1e-63  Score=374.45  Aligned_cols=111  Identities=57%  Similarity=0.957  Sum_probs=107.4

Q ss_pred             CCCCCCCC-CCCCCchhhhHHHHHHHHHHHHHhhCCCCCCCCCCccccchhhhhhhhhhHHHHhhhhhhhhhHHHHHHHH
Q 033610            1 MPKVRTNR-TKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCL   79 (115)
Q Consensus         1 MPkir~~~-k~pPeG~e~IeptL~e~~~kmrea~~e~~~~krk~E~lWpI~rIhhqRSRYIydlyYkrk~ISkeLY~~~l   79 (115)
                      ||+||+++ ++||+|||+|||||+||++|||||+|++|+|||++|++|||||||||||||||||||++++||+||||||+
T Consensus         1 MPkir~~~~k~pP~G~~~Ie~tL~e~~~kmr~ae~~~~~~k~k~e~lWpI~rI~hqrSRYIydlyYk~k~ISkeLY~~ll   80 (145)
T PF01125_consen    1 MPKIRTSRKKPPPEGFEKIEPTLEEFEQKMREAENEPHEGKRKNESLWPIFRIHHQRSRYIYDLYYKRKAISKELYDWLL   80 (145)
T ss_pred             CCCcccCCCCCCCCchHHHHHHHHHHHHHHHHHhhCCCcCCCCCccccceeeecchhhhHHHHHHHHhhhccHHHHHHHH
Confidence            99999764 99999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCHHHHHhhccccchhhhhhhhhccccc
Q 033610           80 DQGYGDSNLIAKWKKVHTCSSFMNKLCKGVSY  111 (115)
Q Consensus        80 ~~~yaD~~LIaKWKK~GYE~~~~~~~~~~~~~  111 (115)
                      +++|||++|||||||+|||++|+.+|+|.-..
T Consensus        81 ~~~yaD~~LIaKWKk~GYE~LCCl~Ciq~~~~  112 (145)
T PF01125_consen   81 KEKYADANLIAKWKKPGYEKLCCLRCIQTRDT  112 (145)
T ss_pred             HcCCcCHHHHHHhccccHHHHHHHHHhccccc
Confidence            99999999999999999999999999996443



The function of G10 is still unknown. G10 is a protein of about 17 to 18 kDa (143 to 157 residues) which is hydrophilic and whose C-terminal half is rich in cysteines and could be involved in metal-binding.; GO: 0005634 nucleus

>KOG3404 consensus G10 protein/predicted nuclear transcription regulator [Transcription] Back     alignment and domain information
>COG5132 BUD31 Cell cycle control protein, G10 family [Transcription / Cell division and chromosome partitioning] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00