Citrus Sinensis ID: 033649

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110----
Protein Sequence
MENYRSKSCKIDSFYDGKATAPTSMQDLRCFSANYATPTQPNDQQLGKKSKSKKSKSTFGSVSKSWSFNDPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVHGWQ
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHEEEEEEEccccHHHHHHcHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHEEEEEEEccEHHHHHHHHHHHHHcccHEEcccc
Coil and Loop (DISEMBL)
menyrsksckidsfydgkataptsmqdlrcfsanyatptqpndqqlgkkskskkskstfgsvskswsfndpelqrkKRVASYKVYTVegkmkgslrKSLKWVKNTYTQIVHGWQ
Flexible Loop (DISEMBL)
menyrsksckidsfydgkATAPTSMQDLRCFSANYATptqpndqqlgkkskskkskstfgsvskswsfndpelqrkkrvasykvytvegkmkgslrkslkwvkntytqivhgwq
Low Complexity Region (SEG)
MENYRSKSCKIDSFYDGKATAPTSMQDLRCFSANYATPTQPNDQQLGkkskskkskstfgsvskswsFNDPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVHGWQ
Disordered region (IsUnstruct)
******************************************************************************VASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVHGW*
Disordered Region (DISOPRED)
*************************************************************************QRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVHGWQ
Disordered Region (DISEMBL)
MENYRSKSCKIDSFYDGKATAPTSMQDLRCFSANYATPT**************************WSFNDPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVHGWQ
Disordered Region (DISPRO)
*****************************************************************WSFNDPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVHGWQ
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MENYRSKSCKIDSFYDGKATAPTSMQDLRCFSANYATPTQPNDQQLGKKSKSKKSKSTFGSVSKSWSFNDPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVHGWQ
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	114
255560727	119	conserved hypothetical protein [Ricinus	0.964	0.924	0.637	3e-33
225442219	117	PREDICTED: uncharacterized protein LOC10	0.973	0.948	0.644	4e-32
224073492	116	predicted protein [Populus trichocarpa]	0.982	0.965	0.567	2e-31
255546143	124	conserved hypothetical protein [Ricinus	0.991	0.911	0.585	2e-31
225444871	116	PREDICTED: uncharacterized protein LOC10	0.956	0.939	0.616	3e-31
297738642	144	unnamed protein product [Vitis vinifera]	0.964	0.763	0.611	2e-30
351724559	121	uncharacterized protein LOC100305758 [Gl	0.964	0.909	0.618	1e-29
449448104	116	PREDICTED: uncharacterized protein LOC10	0.982	0.965	0.610	2e-29
224128554	116	predicted protein [Populus trichocarpa]	0.982	0.965	0.610	2e-29
358248650	121	uncharacterized protein LOC100818486 [Gl	0.964	0.909	0.618	4e-29

>gi|255560727|ref|XP_002521377.1| conserved hypothetical protein [Ricinus communis] gi|223539455|gb|EEF41045.1| conserved hypothetical protein [Ricinus communis]

 Score =  145 bits (367), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 74/116 (63%), Positives = 87/116 (75%), Gaps = 6/116 (5%)

Query: 4   YRSKSCK-----IDSFYDGKATAPTSMQDLRCFSANYATPTQPNDQQLGKKSKSKKSKST 58
           +RSKSC+     I  +Y G  TAPTSMQDLR +S  YA  T     Q GK+ K KK KS 
Sbjct: 5   FRSKSCRDGRMRIADYY-GDKTAPTSMQDLRSYSVGYAGSTTVQPSQFGKELKIKKGKSN 63

Query: 59  FGSVSKSWSFNDPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVHGWQ 114
            GS SK+WSFNDPELQRKKRVASYKVY +EGKMKGSLRKS +W+K+TYTQ+V+GW+
Sbjct: 64  LGSSSKNWSFNDPELQRKKRVASYKVYAMEGKMKGSLRKSFRWIKDTYTQVVYGWR 119

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442219|ref|XP_002277637.1| PREDICTED: uncharacterized protein LOC100267009 [Vitis vinifera]

 Score =  141 bits (356), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 76/118 (64%), Positives = 94/118 (79%), Gaps = 7/118 (5%)

Query: 1   MENYRSKSCK-----IDSFYDGKATAPTSMQDLRCFSANYATPTQPNDQQLGKKSKSKKS 55
           ME+YRSKSC+     I+S+Y G+  AP+ M DLR +S +YA+ +QP   Q+GK+ K KK 
Sbjct: 1   MEDYRSKSCREGRMQIESYYGGRP-APSGMHDLRSYSVSYASSSQP-PTQMGKEVKIKKG 58

Query: 56  KSTFGSVSKSWSFNDPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVHGW 113
           KS+FG  SKSWSFNDPELQRKKRVASYKVY VEGKMKGS RKS +W+K+TYTQ+V+GW
Sbjct: 59  KSSFGPSSKSWSFNDPELQRKKRVASYKVYAVEGKMKGSFRKSFRWIKDTYTQVVYGW 116

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224073492|ref|XP_002304103.1| predicted protein [Populus trichocarpa] gi|222841535|gb|EEE79082.1| predicted protein [Populus trichocarpa]

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 67/118 (56%), Positives = 86/118 (72%), Gaps = 6/118 (5%)

Query: 1   MENYRSKSCKIDSF----YDGKATAPTSMQDLRCFSANYATPTQPNDQQLGKKSKSKKSK 56
           ME +RS+SC+        Y G   AP +M+DLR +S + A   QPN  QLG + K KK K
Sbjct: 1   MERFRSRSCREGRIQMEGYHGDKAAPANMKDLRSYSVSNAVSAQPN--QLGNEVKIKKGK 58

Query: 57  STFGSVSKSWSFNDPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVHGWQ 114
           S  GS SK WSFNDPEL+RK+RVA+YKVY +EGKMKG+LRKS++W+K+T TQ+VHGW+
Sbjct: 59  SNLGSFSKRWSFNDPELKRKRRVANYKVYAMEGKMKGTLRKSIRWIKDTCTQVVHGWR 116

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546143|ref|XP_002514131.1| conserved hypothetical protein [Ricinus communis] gi|223546587|gb|EEF48085.1| conserved hypothetical protein [Ricinus communis]

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/123 (58%), Positives = 90/123 (73%), Gaps = 10/123 (8%)

Query: 1   MENYRSKSC-----KIDSFYDGKA----TAPTSMQDLRCFSANYATPTQPNDQQLGKKS- 50
           ME++RS SC     +I S++   +    +   SMQDLRC+SA+YA+   P   Q+G    
Sbjct: 1   MEDFRSNSCNDGRMQIQSYHGPSSLRSSSGVNSMQDLRCYSASYASSVHPTQTQMGNNDV 60

Query: 51  KSKKSKSTFGSVSKSWSFNDPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIV 110
           K KK KST GSVSKSWSFNDPELQRKKRVASYKVYTVEGK+KGS +KS +W+K+ YT++V
Sbjct: 61  KFKKGKSTNGSVSKSWSFNDPELQRKKRVASYKVYTVEGKVKGSFKKSFRWLKDRYTRVV 120

Query: 111 HGW 113
           HGW
Sbjct: 121 HGW 123

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444871|ref|XP_002281323.1| PREDICTED: uncharacterized protein LOC100266443 [Vitis vinifera]

 Score =  138 bits (348), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 74/120 (61%), Positives = 92/120 (76%), Gaps = 11/120 (9%)

Query: 1   MENYRSKSC-----KIDSFYDGKATAPTS--MQDLRCFSANYATPTQPNDQQLGKKSKSK 53
           ME++RSKSC     +++S Y G    PTS  MQDLRC+SA+YA P Q    Q+G   K K
Sbjct: 1   MEDFRSKSCGDGRMQMES-YHGGGGGPTSTGMQDLRCYSASYAYPPQ---AQMGNDPKFK 56

Query: 54  KSKSTFGSVSKSWSFNDPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVHGW 113
           K KST GS+SK+WSF+DPELQRKKRVASYKVY VEGKMKGSL+KS +W+K+ YT+++HGW
Sbjct: 57  KGKSTNGSLSKAWSFSDPELQRKKRVASYKVYAVEGKMKGSLKKSFRWLKDRYTRVIHGW 116

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738642|emb|CBI27887.3| unnamed protein product [Vitis vinifera]

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/121 (61%), Positives = 92/121 (76%), Gaps = 11/121 (9%)

Query: 1   MENYRSKSC-----KIDSFYDGKATAPTS--MQDLRCFSANYATPTQPNDQQLGKKSKSK 53
           ME++RSKSC     +++S Y G    PTS  MQDLRC+SA+YA P Q    Q+G   K K
Sbjct: 1   MEDFRSKSCGDGRMQMES-YHGGGGGPTSTGMQDLRCYSASYAYPPQA---QMGNDPKFK 56

Query: 54  KSKSTFGSVSKSWSFNDPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVHGW 113
           K KST GS+SK+WSF+DPELQRKKRVASYKVY VEGKMKGSL+KS +W+K+ YT+++HG 
Sbjct: 57  KGKSTNGSLSKAWSFSDPELQRKKRVASYKVYAVEGKMKGSLKKSFRWLKDRYTRVIHGE 116

Query: 114 Q 114
           Q
Sbjct: 117 Q 117

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724559|ref|NP_001236294.1| uncharacterized protein LOC100305758 [Glycine max] gi|255626537|gb|ACU13613.1| unknown [Glycine max]

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/118 (61%), Positives = 84/118 (71%), Gaps = 8/118 (6%)

Query: 4   YRSKSCKIDSF----YDGKATAPTSMQDLRCFS--ANYATPTQPNDQQLGKKSKSKKSKS 57
           +RSKSC+ +S     Y G   APTSMQDLR +S  A+YA    P      K+ K  K KS
Sbjct: 3   FRSKSCRNESLQIENYSGGRVAPTSMQDLRSYSCSASYAGSAYPYKIGKEKEVKVDKGKS 62

Query: 58  TFGS--VSKSWSFNDPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVHGW 113
           T  +  VSKSWSFNDPELQRKKRVA YK+Y+ EGKMKGSLRKSL+W+KNTYTQ VHGW
Sbjct: 63  TVSNSKVSKSWSFNDPELQRKKRVAGYKIYSAEGKMKGSLRKSLRWIKNTYTQAVHGW 120

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448104|ref|XP_004141806.1| PREDICTED: uncharacterized protein LOC101209615 [Cucumis sativus] gi|449480704|ref|XP_004155972.1| PREDICTED: uncharacterized LOC101209615 [Cucumis sativus]

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/118 (61%), Positives = 87/118 (73%), Gaps = 6/118 (5%)

Query: 1   MENYRSKSCKIDSF----YDGKATAPTSMQDLRCFSANYATPTQPNDQQLGKKSKSKKSK 56
           ME++RSKSC+ +      Y+    APT+MQDLR +S +YA+  Q N  Q  K+ K KK K
Sbjct: 1   MEDFRSKSCREERMQIERYNENRIAPTNMQDLRSYSVSYASSVQQN--QSNKEVKMKKGK 58

Query: 57  STFGSVSKSWSFNDPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVHGWQ 114
           S  GS SKSWSF DPELQRK RVA YKVY VEGKMKGSLRKS +W+KNTYTQ+V+GW+
Sbjct: 59  SNMGSTSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKSFRWIKNTYTQVVYGWR 116

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224128554|ref|XP_002329032.1| predicted protein [Populus trichocarpa] gi|118487856|gb|ABK95751.1| unknown [Populus trichocarpa] gi|118488711|gb|ABK96166.1| unknown [Populus trichocarpa] gi|222839703|gb|EEE78026.1| predicted protein [Populus trichocarpa]

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/118 (61%), Positives = 88/118 (74%), Gaps = 6/118 (5%)

Query: 1   MENYRSKSCKIDSF----YDGKATAPTSMQDLRCFSANYATPTQPNDQQLGKKSKSKKSK 56
           ME++RSKSC+        YD    APT+MQDLR +S +YA   QPN  Q GK+ K KK K
Sbjct: 1   MEHFRSKSCREGRIEMEGYDEDKAAPTNMQDLRSYSVSYAVSVQPN--QSGKEGKMKKGK 58

Query: 57  STFGSVSKSWSFNDPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVHGWQ 114
           S   S SKSWSFNDPELQRK+RVA+YKVY +EGKMKGSLRKS +W+K+T TQ+V+GW+
Sbjct: 59  SNLESSSKSWSFNDPELQRKRRVANYKVYAIEGKMKGSLRKSFRWIKDTCTQVVYGWR 116

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248650|ref|NP_001239917.1| uncharacterized protein LOC100818486 [Glycine max] gi|255635015|gb|ACU17866.1| unknown [Glycine max]

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 73/118 (61%), Positives = 83/118 (70%), Gaps = 8/118 (6%)

Query: 4   YRSKSCKIDSF----YDGKATAPTSMQDLRCFS--ANYATPTQPNDQQLGKKSKSKKSKS 57
           +RSKSC+ +S     Y G   APTSMQDLR +S  A YA    P      K+ K  K KS
Sbjct: 3   FRSKSCRNESLQIENYCGGRVAPTSMQDLRSYSYSATYAGSAYPYKIGKEKEVKVDKGKS 62

Query: 58  TFGS--VSKSWSFNDPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVHGW 113
           T  +  VSKSWSFNDPELQRKKRVA YK+Y+VEGKMKGSLRKSL+W+KNTY Q VHGW
Sbjct: 63  TVCNSKVSKSWSFNDPELQRKKRVAGYKIYSVEGKMKGSLRKSLRWIKNTYAQAVHGW 120

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	114
TAIR|locus:2143059	105	AT5G11970 "AT5G11970" [Arabido	0.385	0.419	0.727	2e-16
TAIR|locus:2030295	127	AT1G72720 "AT1G72720" [Arabido	0.385	0.346	0.6	1e-13
TAIR|locus:2047700	116	AT2G19460 "AT2G19460" [Arabido	0.684	0.672	0.438	5.6e-13
TAIR|locus:1006230186	124	AT3G05725 "AT3G05725" [Arabido	0.394	0.362	0.6	2.8e-11
TAIR|locus:2088227	102	AT3G13910 "AT3G13910" [Arabido	0.640	0.715	0.432	3.2e-10
TAIR|locus:2062018	110	AT2G47480 "AT2G47480" [Arabido	0.377	0.390	0.558	8.4e-10
TAIR|locus:2081630	110	AT3G62640 "AT3G62640" [Arabido	0.377	0.390	0.488	2.9e-09
TAIR|locus:2140598	87	AT4G09890 "AT4G09890" [Arabido	0.333	0.436	0.526	6.8e-08

TAIR|locus:2143059 AT5G11970 "AT5G11970" [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
 Identities = 32/44 (72%), Positives = 38/44 (86%)

Query:    70 DPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVHGW 113
             DPELQRKKRVASYK+Y VEGK+KGS R S +W+K  YTQ+V+GW
Sbjct:    61 DPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQVVYGW 104

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2030295 AT1G72720 "AT1G72720" [Arabidopsis thaliana (taxid:3702)]

 Score = 144 (55.7 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
 Identities = 27/45 (60%), Positives = 35/45 (77%)

Query:    70 DPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVHG-W 113
             + E+QRKKRVASY VY VEG++KGS++KS KW K T +  V+G W
Sbjct:    83 EAEIQRKKRVASYNVYGVEGRVKGSMKKSFKWFKETCSNAVYGLW 127

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2047700 AT2G19460 "AT2G19460" [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 39/89 (43%), Positives = 51/89 (57%)

Query:    25 MQDLRCFSANYAT-PTQ-PNDQQLGXXXXXXXXXXXXXXXXXXXXFNDPELQRKKRVASY 82
             MQDLR +S +Y   PT+ P DQ                       F DP+LQRKKRV SY
Sbjct:    37 MQDLRSYSTSYTDYPTRIPEDQN---------PKKGRSSSSSSWGFVDPDLQRKKRVVSY 87

Query:    83 KVYTVEGKMKGSLRKSLKWVKNTYTQIVH 111
             + YTVEGK+KGS RKS KW+K+   ++++
Sbjct:    88 RAYTVEGKLKGSFRKSFKWIKDKCNKLLN 116

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:1006230186 AT3G05725 "AT3G05725" [Arabidopsis thaliana (taxid:3702)]

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 27/45 (60%), Positives = 38/45 (84%)

Query:    68 FNDPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVHG 112
             +NDPE++RK+RVA YK+Y+ EGKMK +LRKS KW+K   ++I+HG
Sbjct:    79 WNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQCSKIIHG 123

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2088227 AT3G13910 "AT3G13910" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 32/74 (43%), Positives = 40/74 (54%)

Query:    31 FSANYATPTQPNDQQLGXXXXXXXXXXXXXXXXXXXXFNDPELQRKKRVASYKVYTVEGK 90
             F  +    +Q ND QL                     F+DPE +RK+RVA YKVY+VE K
Sbjct:    25 FDDSAGDQSQTNDYQL-KIKKSKSVPNADRAASRSWSFSDPESRRKRRVAGYKVYSVEQK 83

Query:    91 MKGSLRKSLKWVKN 104
             MKGS+RKS KW K+
Sbjct:    84 MKGSIRKSFKWFKD 97

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2062018 AT2G47480 "AT2G47480" [Arabidopsis thaliana (taxid:3702)]

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 24/43 (55%), Positives = 33/43 (76%)

Query:    69 NDPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVH 111
             +D E++RKKR+A YK YTVEGK+K +L+   +W+KN   QIVH
Sbjct:    66 SDAEMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVH 108

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2081630 AT3G62640 "AT3G62640" [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 21/43 (48%), Positives = 33/43 (76%)

Query:    70 DPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVHG 112
             D E +RKKR+A+YK Y +EGK+K +++K   W+K+ Y+ I+HG
Sbjct:    68 DAETKRKKRIATYKTYALEGKVKSTVKKGFHWIKDRYSHIIHG 110

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2140598 AT4G09890 "AT4G09890" [Arabidopsis thaliana (taxid:3702)]

 Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
 Identities = 20/38 (52%), Positives = 30/38 (78%)

Query:    70 DPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYT 107
             DPE++RKKRVASY ++  E K+K +L+ S KW+KN ++
Sbjct:    40 DPEMKRKKRVASYNLFATEEKLKSTLKNSFKWIKNKFS 77


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.128   0.388    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      114        94   0.00091  102 3  11 23  0.39    30
                                                     29  0.42    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  580 (62 KB)
  Total size of DFA:  123 KB (2079 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.23u 0.10s 8.33t   Elapsed:  00:00:00
  Total cpu time:  8.23u 0.10s 8.33t   Elapsed:  00:00:00
  Start:  Thu May  9 22:20:33 2013   End:  Thu May  9 22:20:33 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	114
pfam12023	47	pfam12023, DUF3511, Domain of unknown function (DU	5e-21

>gnl|CDD|204810 pfam12023, DUF3511, Domain of unknown function (DUF3511)

 Score = 78.6 bits (194), Expect = 5e-21
 Identities = 28/47 (59%), Positives = 38/47 (80%)

Query: 66  WSFNDPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVHG 112
           W  +DPE++R++RVA+YK Y VEGK+K SLRKS KW+K+  + IVHG
Sbjct: 1   WGLSDPEMKRRRRVAAYKAYAVEGKVKASLRKSFKWIKDKCSHIVHG 47

This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is about 50 amino acids in length. This domain has two completely conserved residues (Y and K) that may be functionally important. Length = 47

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	114
PF12023	47	DUF3511: Domain of unknown function (DUF3511); Int	99.97

>PF12023 DUF3511: Domain of unknown function (DUF3511); InterPro: IPR021899 This presumed domain is functionally uncharacterised

Probab=99.97  E-value=9e-33  Score=176.91  Aligned_cols=47  Identities=72%  Similarity=1.275  Sum_probs=46.5

Q ss_pred             cccCChHHHhhhhhheeeeeeeeccchhhhhccchhhhhhhheeccc
Q 033649           66 WSFNDPELQRKKRVASYKVYTVEGKMKGSLRKSLKWVKNTYTQIVHG  112 (114)
Q Consensus        66 w~~~dpE~kRkkRVA~Yk~y~vEGKvK~S~r~sfrWiK~k~s~iv~G  112 (114)
                      |+|+|||||||||||+||+|+||||||+|||+||||||++|++||||
T Consensus         1 w~~~dpE~kRkkRVA~Yk~y~vEGKvK~S~R~sfrWiK~k~s~iv~G   47 (47)
T PF12023_consen    1 WGFNDPEMKRKKRVASYKVYAVEGKVKGSLRKSFRWIKNKCSRIVYG   47 (47)
T ss_pred             CCCCCHHHHHHHHHHhhheeeeehHHHHHHHhhhHHHHHHhhHhhcC
Confidence            89999999999999999999999999999999999999999999998

This domain is found in eukaryotes. This domain is about 50 amino acids in length. This domain has two completely conserved residues (Y and K) that may be functionally important.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00