Citrus Sinensis ID: 033782

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-
Protein Sequence
MGLSGKPQVDGGLESEGKRWVIAGIPLRAPLKPIYTNPVPTAVDKEVDSGTDEELSTTPTSEDARIPAKLTCPAAPRKRKSSLKCNYSGVREFFSPPDLESVFIRHVERAN
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccEcccccccccEEEEEEEEEccccccEEcccccccEEcccccccccccccccccccccccccccccccccccccccccccccEEEcccccccHHHHEEEHHccc
Coil and Loop (DISEMBL)
mglsgkpqvdgglesegkrwviagiplraplkpiytnpvptavdkevdsgtdeelsttptsedaripakltcpaaprkrksslkcnysgvreffsppdlesVFIRHVERAN
Flexible Loop (DISEMBL)
mglsgkpqvdggleseGKRWVIAGIplraplkpiytnPVPTAVDKEVDSGTDEELsttptsedaripakltcpaaprkrksslkcnysgvreffsppdlesvfIRHVERAN
Low Complexity Region (SEG)
MGLSGKPQVDGGLESEGKRWVIAGIPLRAPLKPIYTNPVPTAVDKEVDSGTDEELSTTPTSEDARIPAKLTCPAAPRKRKSSLKCNYSGVREFFSPPDLESVFIRHVERAN
Disordered region (IsUnstruct)
*****************KRWVIAGIPLRAPLKPIYTNPV*********************************************CNYSGVREFFS***LESVFI*******
Disordered Region (DISOPRED)
******************RWVIAGIPLRAPL********************************ARIPAKLTCPAA****************EFFSPPDLESVFIRHVE***
Disordered Region (DISEMBL)
************LESEGKRWVIAGIPLRAPLKPIYTNPVPTAVD*******************ARIPAKLTCP*********LKCNYSGVREFFSPPDLESVFIRHVERAN
Disordered Region (DISPRO)
**************SEGKRWVIAGIPLRAPLKPIYTNPV*****************T*****DARIPAKLTCPAAPRKRKSSLKCNYSGVREFFSPPDLESVFIRHVER**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGLSGKPQVDGGLESEGKRWVIAGIPLRAPLKPIYTNPVPTAVDKEVDSGTDEELSTTPTSEDARIPAKLTCPAAPRKRKSSLKCNYSGVREFFSPPDLESVFIRHVERAN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	111
225470585	107	PREDICTED: uncharacterized protein LOC10	0.945	0.981	0.687	4e-33
225452346	103	PREDICTED: uncharacterized protein LOC10	0.927	1.0	0.657	3e-32
255574003	101	conserved hypothetical protein [Ricinus	0.873	0.960	0.699	2e-31
224110898	111	predicted protein [Populus trichocarpa]	0.972	0.972	0.649	2e-31
224141267	106	predicted protein [Populus trichocarpa]	0.954	1.0	0.603	6e-30
255560904	110	conserved hypothetical protein [Ricinus	0.981	0.990	0.625	1e-28
224102441	112	predicted protein [Populus trichocarpa]	0.972	0.964	0.660	2e-27
388498518	106	unknown [Lotus japonicus] gi|388505700|g	0.936	0.981	0.584	1e-26
356567668	119	PREDICTED: uncharacterized protein LOC10	0.981	0.915	0.554	1e-25
356497379	107	PREDICTED: uncharacterized protein LOC10	0.936	0.971	0.614	4e-25

>gi|225470585|ref|XP_002273869.1| PREDICTED: uncharacterized protein LOC100266480 [Vitis vinifera]

 Score =  145 bits (365), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 77/112 (68%), Positives = 89/112 (79%), Gaps = 7/112 (6%)

Query: 1   MGL-SGKPQVDGGLESEGKRWVIAGIPLRAPLKPIYTNPVPTAVDKEVDSGTDEELSTTP 59
           MGL + K QVDGGLESE K+WVI+GI LRAPLKP+YT+PV    D+E      EE ST P
Sbjct: 1   MGLFAEKLQVDGGLESENKKWVISGIQLRAPLKPVYTSPVGKERDEE-----GEECST-P 54

Query: 60  TSEDARIPAKLTCPAAPRKRKSSLKCNYSGVREFFSPPDLESVFIRHVERAN 111
           T E+ARIP  LTCP APRKRK S +CNY+GVREFF+PPDLE+VFIRHVERA+
Sbjct: 55  TYEEARIPTTLTCPPAPRKRKPSSRCNYNGVREFFTPPDLETVFIRHVERAS 106

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452346|ref|XP_002274411.1| PREDICTED: uncharacterized protein LOC100268049 [Vitis vinifera] gi|147783376|emb|CAN59885.1| hypothetical protein VITISV_026167 [Vitis vinifera]

 Score =  142 bits (358), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 73/111 (65%), Positives = 88/111 (79%), Gaps = 8/111 (7%)

Query: 1   MGLSGKPQVDGGLESEGKRWVIAGIPLRAPLKPIYTNPVPTAVDKEVDSGTDEELSTTPT 60
           MG S KPQVDG +ESEGK+WVIAGI +RAPL+P+ T P     +KE D   DE  STTPT
Sbjct: 1   MGFSEKPQVDGSIESEGKKWVIAGISIRAPLRPVSTKP----REKESD---DEACSTTPT 53

Query: 61  SEDARIPAKLTCPAAPRKRKSSLKCNYSGVREFFSPPDLESVFIRHVERAN 111
           +++ARIP +L CP APRKR+ S +C+ +GVREFF+PPDLESVFIRHVERAN
Sbjct: 54  TKEARIPERLPCPPAPRKRRPS-RCHLNGVREFFTPPDLESVFIRHVERAN 103

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574003|ref|XP_002527919.1| conserved hypothetical protein [Ricinus communis] gi|223532694|gb|EEF34476.1| conserved hypothetical protein [Ricinus communis]

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/103 (69%), Positives = 82/103 (79%), Gaps = 6/103 (5%)

Query: 1   MGLSGKPQVDGGLESEGKRWVIAGIPLRAPLKPIYTNPVPTAVDKEVDSGTDEELSTTPT 60
           MG SGK QVD GLE + K+WVIAGIPLRAPLKPIYT PV   V+KE D   ++E STTPT
Sbjct: 1   MGFSGKTQVDNGLELDSKKWVIAGIPLRAPLKPIYTKPV---VEKESDQ--NDECSTTPT 55

Query: 61  SEDARIPAKLTCPAAPRKRKSSLKCNYSGVREFFSPPDLESVF 103
           SE AR PA+L CP AP+KRK++LKCNYS  REFF PPDLE+VF
Sbjct: 56  SEQARTPARLMCPPAPKKRKATLKCNYSN-REFFIPPDLETVF 97

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224110898|ref|XP_002315674.1| predicted protein [Populus trichocarpa] gi|222864714|gb|EEF01845.1| predicted protein [Populus trichocarpa]

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/114 (64%), Positives = 89/114 (78%), Gaps = 6/114 (5%)

Query: 1   MGLSGKP-QVDGGLESEG-KRWVIAGIPLRAPLKPIYTNPVPTAVDKEVDSGTDEELSTT 58
           MG S KP  VDGGL+ +G KRWVIAGIPLRAPLKPI TNPV   ++++ D       STT
Sbjct: 1   MGFSKKPPAVDGGLDLDGGKRWVIAGIPLRAPLKPISTNPVEKEINEDDDQSNCTTASTT 60

Query: 59  PTSEDARIPAKLTCPAAPRKRKSSLKCNY-SGVREFFSPPDLESVFIRHVERAN 111
           PTSE+ARIP++L CP APRKRK++ KCNY SGVREFF+PPDLE++F   V+RAN
Sbjct: 61  PTSEEARIPSRLVCPPAPRKRKATFKCNYTSGVREFFTPPDLETLF---VQRAN 111

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141267|ref|XP_002323996.1| predicted protein [Populus trichocarpa] gi|222866998|gb|EEF04129.1| predicted protein [Populus trichocarpa]

 Score =  134 bits (338), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 82/111 (73%), Gaps = 5/111 (4%)

Query: 1   MGLSGKPQVDGGLESEGKRWVIAGIPLRAPLKPIYTNPVPTAVDKEVDSGTDEELSTTPT 60
           MG S K QVD GL+SEGK+WVIAGI +R  LKP+ T       D     G +EE STTPT
Sbjct: 1   MGFSKKTQVDSGLDSEGKKWVIAGIAIRTSLKPVNTKSRVKDCD-----GDEEEFSTTPT 55

Query: 61  SEDARIPAKLTCPAAPRKRKSSLKCNYSGVREFFSPPDLESVFIRHVERAN 111
           +++ARIP +L CP APRKR+ S +CNYSGVREFF+PPDLE+VF  +VE+AN
Sbjct: 56  AKEARIPERLPCPPAPRKRRPSSRCNYSGVREFFTPPDLETVFKCYVEKAN 106

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255560904|ref|XP_002521465.1| conserved hypothetical protein [Ricinus communis] gi|223539364|gb|EEF40955.1| conserved hypothetical protein [Ricinus communis]

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 70/112 (62%), Positives = 85/112 (75%), Gaps = 3/112 (2%)

Query: 1   MGLSGKPQVDGGLESEGKRWVIAGIPLRAPLKPIYTNPVPTAVDKEVDSGTDEELSTTPT 60
           MG S K QVD GL+SEGK+WVIAGI +R  LKPI T P   A +   DS  +E+ STTPT
Sbjct: 1   MGFSKKSQVDSGLDSEGKKWVIAGIAIRTSLKPISTRPRAKASENGDDS-EEEQCSTTPT 59

Query: 61  SEDARIPAKLTCPAAPRKRKSSLKCNY-SGVREFFSPPDLESVFIRHVERAN 111
           ++++RIP +L CP APRKR+ S +CNY SGVREFFSPPDLESVF  +VE+AN
Sbjct: 60  AKESRIPERLPCPPAPRKRRPS-RCNYNSGVREFFSPPDLESVFKCYVEKAN 110

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224102441|ref|XP_002312678.1| predicted protein [Populus trichocarpa] gi|222852498|gb|EEE90045.1| predicted protein [Populus trichocarpa]

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/115 (66%), Positives = 92/115 (80%), Gaps = 7/115 (6%)

Query: 1   MGLSGKPQV-DGGLESEG-KRWVIAGIPLRAPLKPIYTNPVPTAVDKEVDSG-TDEELST 57
           MG S KPQV DGGL+ +G KRWVIAGIPLRAPLKPI+TNPV   +  E D G ++   ST
Sbjct: 1   MGFSEKPQVVDGGLDLDGNKRWVIAGIPLRAPLKPIFTNPVEKEIYDESDDGQSNCTTST 60

Query: 58  TPTSEDARIPAKLTCPAAPRKRKSSLKCNY-SGVREFFSPPDLESVFIRHVERAN 111
           TPTSE+A+IP+KL CP APRKRK++ KCNY SG+REFF+PPDLE++FI   +RAN
Sbjct: 61  TPTSEEAKIPSKLVCPPAPRKRKATFKCNYTSGMREFFTPPDLETLFI---QRAN 112

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388498518|gb|AFK37325.1| unknown [Lotus japonicus] gi|388505700|gb|AFK40916.1| unknown [Lotus japonicus]

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/113 (58%), Positives = 82/113 (72%), Gaps = 9/113 (7%)

Query: 1   MGLSGKPQVDGGLESEGKRWVIAGIPLRAPLKPIYTNPVPTAVDKEVDSGTD-EELSTTP 59
           MGLS   QV+G  ES+ ++WVIAGI LRAPLKPIYT      V+KE+   ++ EE  TTP
Sbjct: 1   MGLSENVQVEGAFESDNRKWVIAGIALRAPLKPIYT----AHVEKEIREDSEPEECLTTP 56

Query: 60  TSEDARIPAKLTCPAAPRKRKSSLKCNYSG-VREFFSPPDLESVFIRHVERAN 111
           T E++RIP   TCP APRKRK SL+CNY G VR+FF+P +LE+VFI   +RAN
Sbjct: 57  TGEESRIPTVFTCPPAPRKRKPSLQCNYRGVVRKFFTPQELETVFI---QRAN 106

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567668|ref|XP_003552039.1| PREDICTED: uncharacterized protein LOC100790537 [Glycine max]

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 84/119 (70%), Gaps = 10/119 (8%)

Query: 1   MGLSGKPQVDGGLESE----GKRWVIAGIPLRAPLKPIYTNPVPTAVDKEVDSGTDEELS 56
           MG S K Q++G  +S+     ++WVIAGI LRAPLKPIYT P+     +EV++  D   S
Sbjct: 1   MGFSEKAQLEGAFDSDTNNNNRKWVIAGIALRAPLKPIYTIPMEKEQKEEVET-EDCSSS 59

Query: 57  TTPTSEDARIPAKLTCPAAPRKRK-SSLKCNYSG----VREFFSPPDLESVFIRHVERA 110
           TTPT+ +++IP   TCP APRKRK +S KCNY      VREFF+PPDLE+VFIRHVE+A
Sbjct: 60  TTPTNVESKIPTPFTCPPAPRKRKPASKKCNYRRGGGVVREFFTPPDLETVFIRHVEKA 118

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356497379|ref|XP_003517538.1| PREDICTED: uncharacterized protein LOC100787501 [Glycine max]

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/114 (61%), Positives = 82/114 (71%), Gaps = 10/114 (8%)

Query: 1   MGLSGKPQVDGGLESEGKR-WVIAGIPLRAPLKPIYTNPVPTAVDKEVDSGTDEELSTTP 59
           MG S KPQV+   ES+  R WVIAGIP RAPLKPI+T    T  +++ + G  EE STTP
Sbjct: 1   MGFSEKPQVE---ESDSTRKWVIAGIPSRAPLKPIFT----TKEEEKDEEGDLEECSTTP 53

Query: 60  TSEDARIPAKLTCPAAPRKRKSSLKCNY--SGVREFFSPPDLESVFIRHVERAN 111
             E+A+IP  L CP APRKRK SLKCNY   G REFF+PPDLE+VFIRHVER +
Sbjct: 54  KGEEAKIPTTLKCPPAPRKRKPSLKCNYRGGGAREFFTPPDLETVFIRHVERTS 107

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	111
TAIR|locus:2155657	112	AT5G40460 "AT5G40460" [Arabido	0.945	0.937	0.545	6.6e-26
TAIR|locus:2196459	110	AT1G10690 [Arabidopsis thalian	0.909	0.918	0.545	2.9e-23
TAIR|locus:4515102692	106	AT1G60783 "AT1G60783" [Arabido	0.873	0.915	0.486	1.6e-17
TAIR|locus:2089169	99	AT3G27630 "AT3G27630" [Arabido	0.855	0.959	0.411	1.6e-13
TAIR|locus:504956327	116	AT1G51355 "AT1G51355" [Arabido	0.576	0.551	0.4	1.3e-06
TAIR|locus:5019474757	108	AT3G20898 "AT3G20898" [Arabido	0.468	0.481	0.396	5.5e-06
TAIR|locus:2185213	72	AT5G02220 [Arabidopsis thalian	0.513	0.791	0.385	5e-05
TAIR|locus:2181728	115	AT5G02420 [Arabidopsis thalian	0.576	0.556	0.375	0.00057
TAIR|locus:2199998	111	AT1G08180 [Arabidopsis thalian	0.630	0.630	0.350	0.00073

TAIR|locus:2155657 AT5G40460 "AT5G40460" [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 60/110 (54%), Positives = 78/110 (70%)

Query:     1 MGLSGKPQVDGGLESEGKRWVIAGIPLRAPLKPIYTN-PVPTAVDKEVDS---GTDEELS 56
             MG S K Q +GGLES+GK+WVIAGI +RA LKP+ T    P  +  EV+      +EE S
Sbjct:     1 MGFSKKSQFEGGLESDGKKWVIAGISIRASLKPVKTKLRAPPEIVTEVEEDCYNEEEECS 60

Query:    57 TTPTSEDARIPAKLTCPAAPRKRKSSLKCNYSGVREFFSPP-DLESVFIR 105
             TTPT+++ +IP  L CP APRKR+ +LKC  + VREFF+PP DLE+VF+R
Sbjct:    61 TTPTAKETKIPELLECPPAPRKRRPALKCRSNVVREFFTPPSDLETVFLR 110

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

GO:0009694 "jasmonic acid metabolic process" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

TAIR|locus:2196459 AT1G10690 [Arabidopsis thaliana (taxid:3702)]

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 60/110 (54%), Positives = 76/110 (69%)

Query:     1 MGLSGKP--QVDGGL-ES-EGKRWVIAGIPLRAPLKPIYTNPVPTAVDKEVDSGTDEELS 56
             MG SGKP  Q+DG + ES +GK+WVIAGIP R+PLK I  +P  T  + E      ++  
Sbjct:     1 MGYSGKPHHQLDGEIRESTDGKKWVIAGIPSRSPLKQINLSPGVTVTETE----EQDQCP 56

Query:    57 TTPTSEDARIPAKLTCPAAPRKRKSSLKCNYSGV-REFFSPPDLESVFIR 105
             TTPT+   RIP    CPAAP+KRK SLKC+Y  V R++FSPPDLE+VFI+
Sbjct:    57 TTPTAVSVRIPRVPPCPAAPKKRKPSLKCSYVTVTRDYFSPPDLETVFIQ 106

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:4515102692 AT1G60783 "AT1G60783" [Arabidopsis thaliana (taxid:3702)]

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 53/109 (48%), Positives = 67/109 (61%)

Query:     1 MGLSGKP--QVDGGLE--SEGKRWVIAGIPLRAPLKPIYTNPVPTAVDKEVDSGTDEELS 56
             MG SGK   Q D      +EGK+ VI GI L + +KPI  +         V +  DE+L 
Sbjct:     1 MGFSGKTYHQFDRKFSETTEGKKCVITGISLHSTVKPISLS------SSAVSNTEDEDLC 54

Query:    57 -TTPTSEDARIPAKLTCPAAPRKRKSSLKCNYSGVREFFSPPDLESVFI 104
              TTPT++  RIP  + CP AP+KRK +LK +Y G REFFSPPDLE+VFI
Sbjct:    55 PTTPTADSVRIPTVIPCPPAPKKRKLTLKVSY-GPREFFSPPDLETVFI 102

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2089169 AT3G27630 "AT3G27630" [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 44/107 (41%), Positives = 64/107 (59%)

Query:     1 MGLSGKPQVDGGLESEGKRWVIAGIPLRAPLKPIYTNPVPTAVDKEVDSGTDEELSTTPT 60
             MG+S K QV   L+++GK+++ A   +RA LKP+ T  +    ++E + G    +  TPT
Sbjct:     1 MGISKKSQVSRELDTDGKKFIFAKTSIRASLKPVKTKLIKP--ERESEDG----ICITPT 54

Query:    61 SEDARIPAKLTCPAAPRKRKSSLKCNYSGVR-EFFSPP-DLESVFIR 105
             +  A+ P    CPAAPRKR   LKC  + +R E+F PP D E VFI+
Sbjct:    55 ARGAKTPE---CPAAPRKRPPVLKCQ-NNIRIEYFVPPSDFELVFIQ 97

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:504956327 AT1G51355 "AT1G51355" [Arabidopsis thaliana (taxid:3702)]

 Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 28/70 (40%), Positives = 38/70 (54%)

Query:    36 TNPVPTAVDKEVDSGTDEELSTTPTSEDARIPAKLTCPAAPRKRKSSLKCNYSGVR-EFF 94
             T+P  TA    V +   E    TP  E +RIP  LTCP AP+K+K +  C     +  FF
Sbjct:    43 TSPTSTATPSPVSA---ESGCCTP--EKSRIPEMLTCPPAPKKQKVAQNCALRRRQIAFF 97

Query:    95 SPPDLESVFI 104
             +PPD+E  F+
Sbjct:    98 APPDVELFFV 107

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:5019474757 AT3G20898 "AT3G20898" [Arabidopsis thaliana (taxid:3702)]

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 21/53 (39%), Positives = 33/53 (62%)

Query:    58 TPTSEDARIPAKLTCPAAPRKRKSSLKCNYSGVR-EFFSPPDLESVFIRHVER 109
             TP ++ +RIP  LTCP AP+K++ S  C     +  FF+PP++E  F+   +R
Sbjct:    56 TPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFFVNAHDR 108

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2185213 AT5G02220 [Arabidopsis thaliana (taxid:3702)]

 Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 22/57 (38%), Positives = 28/57 (49%)

Query:    53 EELSTTPTSEDARIPAKLTCPAAPRKRKSSLKCNYSGVREFFSPPDLESVFIRHVER 109
             EE  TTP S   RIP    CP  PRK+   ++        +F PPDLE++F     R
Sbjct:    12 EEGCTTPRSTMYRIPVASVCPPPPRKKLMVVRKRDPPRNGYFQPPDLETLFYAQPRR 68

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2181728 AT5G02420 [Arabidopsis thaliana (taxid:3702)]

 Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
 Identities = 27/72 (37%), Positives = 37/72 (51%)

Query:    27 LRAPLKPIYTNPVPTAVDKEVDSGTDEELSTTPTSEDARIP-AKLT-CPAAPRKRKSSLK 84
             +R P +P     +P + D E  +  +EE   TPTS D +IP  K T CP APRK K +  
Sbjct:    18 IRLPTRPELD--IPDS-DHEDPTVNEEEGCKTPTSSDHKIPEVKYTLCPPAPRKPKPNRS 74

Query:    85 CNYSGVREFFSP 96
                SG +   +P
Sbjct:    75 ---SGTKRKLTP 83

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2199998 AT1G08180 [Arabidopsis thaliana (taxid:3702)]

 Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
 Identities = 27/77 (35%), Positives = 32/77 (41%)

Query:    32 KPIYTNPVPTAVDKEVDSGTDEELST---TPTSEDARIPAKLTCPAAPRKRKSSL----K 84
             K +   P     +   DS   EEL     TPTS D +IP   TCP  PRKR   +    K
Sbjct:    12 KTVEQKPRSQEEEDHQDSSKKEELLESLCTPTSSDHKIPEVETCPPPPRKRPREISLTKK 71

Query:    85 CNYSGVREFFSPPDLES 101
                S    FF   D+ S
Sbjct:    72 TRLSKDLRFFEATDVGS 88


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.133   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      111       111   0.00091  102 3  11 23  0.39    31
                                                     29  0.42    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  569 (61 KB)
  Total size of DFA:  118 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.01u 0.11s 14.12t   Elapsed:  00:00:01
  Total cpu time:  14.01u 0.11s 14.12t   Elapsed:  00:00:01
  Start:  Fri May 10 03:42:40 2013   End:  Fri May 10 03:42:41 2013

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

GO:0009888 "tissue development" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00020669001 SubName- Full=Putative uncharacterized protein (Chromosome chr14 scaffold_21, whole genome shotgun sequence); (103 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	111
PLN03031	102	PLN03031, PLN03031, hypothetical protein; Provisio	9e-51

>gnl|CDD|215546 PLN03031, PLN03031, hypothetical protein; Provisional

 Score =  155 bits (393), Expect = 9e-51
 Identities = 71/105 (67%), Positives = 85/105 (80%), Gaps = 5/105 (4%)

Query: 1   MGLSGKPQVDGGLESEGKRWVIAGIPLRAPLKPIYTNPVPTAVDKEVDSGTDEELSTTPT 60
           MG S K QVDGGLES+GK+WVIAGI +RAPLKPI T PV    D+E     ++E STTPT
Sbjct: 1   MGFSKKSQVDGGLESDGKKWVIAGISIRAPLKPISTKPVAKEEDEE-----EDECSTTPT 55

Query: 61  SEDARIPAKLTCPAAPRKRKSSLKCNYSGVREFFSPPDLESVFIR 105
           +++ARIP +L CP APRKRK SLKCNY+GVREFF+PPDLE+VFI+
Sbjct: 56  AKEARIPERLPCPPAPRKRKPSLKCNYNGVREFFTPPDLETVFIQ 100

Length = 102

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	111
PLN03031	102	hypothetical protein; Provisional	100.0

>PLN03031 hypothetical protein; Provisional

Probab=100.00  E-value=1.2e-51  Score=293.51  Aligned_cols=102  Identities=69%  Similarity=1.194  Sum_probs=94.2

Q ss_pred             CCCCCCCcccCcccCCCcceEEecccccCCCCceeeCCCCCcccccCCCCcccCCcCCCCCCCCCCCCCCCCCCCCCCCC
Q 033782            1 MGLSGKPQVDGGLESEGKRWVIAGIPLRAPLKPIYTNPVPTAVDKEVDSGTDEELSTTPTSEDARIPAKLTCPAAPRKRK   80 (111)
Q Consensus         1 mg~s~k~q~~~~~~~~~kkwviagi~l~a~LkPi~t~~~~~~~~~~~~~~e~~~C~TTPts~e~rIP~~~~CPPAPRK~r   80 (111)
                      ||||+|+||||+|||||||||||||+||||||||+|++...    +. ++|+++|.+|||+++||||..++|||||||++
T Consensus         1 mg~s~k~q~~~~~~~~~kkwviagi~~ra~LkPi~t~~~~~----~~-~ee~~~c~~TPts~~~rIP~~~~CPPAPrK~r   75 (102)
T PLN03031          1 MGFSKKSQVDGGLESDGKKWVIAGISIRAPLKPISTKPVAK----EE-DEEEDECSTTPTAKEARIPERLPCPPAPRKRK   75 (102)
T ss_pred             CCcCcccccccccccCCceEEEeccCcccccCceeccCCCc----cc-cccccccccCCCCccccCCCCCcCCCCCCCCC
Confidence            99999999999999999999999999999999999998873    22 67788995569999999999999999999999


Q ss_pred             CcccccCCCCccccCCCchhHHhhhhc
Q 033782           81 SSLKCNYSGVREFFSPPDLESVFIRHV  107 (111)
Q Consensus        81 ~~~~c~~~~~~~FF~~PDLe~~F~~~~  107 (111)
                      ++.+|++++.++||++||||+||+.|+
T Consensus        76 ~~~kc~~~p~~~FF~pPDLEsvFv~r~  102 (102)
T PLN03031         76 PSLKCNYNGVREFFTPPDLETVFIQRA  102 (102)
T ss_pred             ccccccCCCCCCccCCCChhheeEecC
Confidence            999998888999999999999998874

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00